AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480020936.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480020936.01.T01 MTR_2g438650 55.011 469 154 9 114 576 39 456 4.67e-163 473
MsG0480020936.01.T01 MTR_6g037380 56.707 328 106 9 265 579 24 328 1.99e-109 331
MsG0480020936.01.T01 MTR_2g048290 66.327 196 35 2 152 346 24 189 9.08e-82 255
MsG0480020936.01.T01 MTR_5g037520 38.209 335 180 2 102 425 1 319 2.03e-74 244
MsG0480020936.01.T01 MTR_6g045237 48.918 231 117 1 133 362 35 265 2.87e-72 239
MsG0480020936.01.T01 MTR_7g445700 42.803 264 142 2 109 363 1 264 5.61e-71 239
MsG0480020936.01.T01 MTR_0012s0140 53.403 191 89 0 149 339 59 249 3.98e-70 236
MsG0480020936.01.T01 MTR_0195s0010 48.333 240 114 4 104 339 16 249 2.42e-68 222
MsG0480020936.01.T01 MTR_8g445450 51.872 187 90 0 151 337 20 206 1.00e-67 221
MsG0480020936.01.T01 MTR_0195s0020 48.548 241 114 4 104 340 16 250 8.66e-67 226
MsG0480020936.01.T01 MTR_2g036980 36.034 358 143 6 102 425 1 306 6.13e-62 210
MsG0480020936.01.T01 MTR_3g086820 36.036 333 174 6 169 496 21 319 2.24e-60 206
MsG0480020936.01.T01 MTR_4g096760 42.857 245 133 3 92 332 1 242 3.08e-60 208
MsG0480020936.01.T01 MTR_7g111460 38.521 257 150 2 110 363 5 256 9.36e-59 208
MsG0480020936.01.T01 MTR_6g022050 45.283 212 115 1 123 333 24 235 9.54e-56 188
MsG0480020936.01.T01 MTR_0488s0020 35.806 310 165 5 121 417 59 347 1.64e-55 195
MsG0480020936.01.T01 MTR_8g466790 42.373 236 105 3 108 342 2 207 2.91e-55 186
MsG0480020936.01.T01 MTR_8g446490 83.333 108 17 1 446 553 1 107 4.51e-55 182
MsG0480020936.01.T01 MTR_4g108010 46.524 187 97 2 110 293 4 190 5.86e-52 177
MsG0480020936.01.T01 MTR_6g471850 40.562 249 105 3 116 354 9 224 1.73e-51 184
MsG0480020936.01.T01 MTR_7g063160 53.548 155 72 0 178 332 22 176 7.89e-51 180
MsG0480020936.01.T01 MTR_3g050340 36.800 250 127 4 109 358 3 221 2.80e-50 178
MsG0480020936.01.T01 MTR_4g035630 42.079 202 113 1 140 337 28 229 1.01e-47 170
MsG0480020936.01.T01 MTR_3g062250 36.792 212 132 1 148 359 20 229 1.44e-47 175
MsG0480020936.01.T01 MTR_4g093740 33.684 285 153 4 109 388 1 254 1.62e-47 174
MsG0480020936.01.T01 MTR_8g104770 39.496 238 132 3 110 335 8 245 1.15e-46 166
MsG0480020936.01.T01 MTR_3g079805 39.910 223 92 4 123 342 10 193 2.47e-46 165
MsG0480020936.01.T01 MTR_3g465060 30.479 397 164 7 184 579 66 351 5.66e-46 166
MsG0480020936.01.T01 MTR_3g464250 48.649 148 76 0 182 329 41 188 8.61e-45 159
MsG0480020936.01.T01 MTR_1024s0010 55.000 120 54 0 200 319 1 120 1.82e-44 155
MsG0480020936.01.T01 MTR_8g104170 36.735 245 141 5 171 404 1 242 1.98e-43 160
MsG0480020936.01.T01 MTR_2g031910 50.000 126 63 0 210 335 4 129 4.96e-43 154
MsG0480020936.01.T01 MTR_1g093780 38.197 233 112 3 128 358 8 210 9.63e-43 160
MsG0480020936.01.T01 MTR_7g006745 43.889 180 81 2 119 298 34 193 1.21e-40 152
MsG0480020936.01.T01 MTR_8g045340 45.122 164 75 1 171 334 3 151 1.16e-38 146
MsG0480020936.01.T01 MTR_7g013110 37.037 216 101 4 109 304 3 203 2.21e-38 147
MsG0480020936.01.T01 MTR_4g031410 45.098 153 56 1 210 362 7 131 3.24e-38 142
MsG0480020936.01.T01 MTR_4g031755 45.098 153 56 1 210 362 7 131 3.24e-38 142
MsG0480020936.01.T01 MTR_4g045863 39.594 197 92 3 171 363 4 177 4.14e-38 145
MsG0480020936.01.T01 MTR_1g032820 43.791 153 85 1 212 364 1 152 5.59e-38 139
MsG0480020936.01.T01 MTR_5g046930 41.250 160 90 1 162 317 14 173 3.15e-37 136
MsG0480020936.01.T01 MTR_6g049130 33.948 271 140 7 131 396 74 310 5.56e-37 141
MsG0480020936.01.T01 MTR_0014s0120 32.353 238 130 4 153 386 50 260 6.18e-37 141
MsG0480020936.01.T01 MTR_1g062320 54.630 108 49 0 212 319 1 108 6.40e-36 139
MsG0480020936.01.T01 MTR_1g040935 45.390 141 77 0 215 355 3 143 7.49e-36 138
MsG0480020936.01.T01 MTR_4g031785 41.667 168 63 3 210 373 7 143 4.22e-35 135
MsG0480020936.01.T01 MTR_0098s0100 31.159 276 128 5 106 369 8 233 5.51e-35 139
MsG0480020936.01.T01 MTR_1g041005 45.522 134 73 0 215 348 60 193 7.53e-35 134
MsG0480020936.01.T01 MTR_5g029545 82.759 87 15 0 493 579 1 87 1.13e-34 126
MsG0480020936.01.T01 MTR_8g022850 36.150 213 89 5 128 331 3 177 1.11e-33 130
MsG0480020936.01.T01 MTR_1g063810 48.837 129 64 2 121 248 34 161 2.83e-33 125
MsG0480020936.01.T01 MTR_1g090997 30.496 282 182 5 228 499 2 279 5.90e-33 131
MsG0480020936.01.T01 MTR_6g038330 49.074 108 55 0 212 319 1 108 2.41e-32 125
MsG0480020936.01.T01 MTR_2g013990 44.203 138 54 2 211 348 32 146 5.83e-32 127
MsG0480020936.01.T01 MTR_2g032880 36.782 174 88 2 169 342 42 193 4.02e-31 127
MsG0480020936.01.T01 MTR_5g044720 35.841 226 128 6 290 505 64 282 4.14e-31 129
MsG0480020936.01.T01 MTR_1g034250 38.764 178 87 2 107 266 6 179 1.55e-30 120
MsG0480020936.01.T01 MTR_5g024590 34.434 212 115 5 200 405 1 194 7.42e-30 118
MsG0480020936.01.T01 MTR_8g040870 48.000 125 54 1 233 357 38 151 2.02e-29 116
MsG0480020936.01.T01 MTR_4g046100 40.373 161 87 2 230 389 1 153 2.04e-29 117
MsG0480020936.01.T01 MTR_7g056053 40.244 164 82 4 239 397 11 163 2.61e-29 119
MsG0480020936.01.T01 MTR_0566s0020 43.558 163 83 5 95 251 3 162 2.84e-29 115
MsG0480020936.01.T01 MTR_5g032730 55.856 111 39 3 452 560 35 137 2.11e-28 110
MsG0480020936.01.T01 MTR_6g061130 43.411 129 66 2 251 374 75 201 2.32e-28 117
MsG0480020936.01.T01 MTR_6g043680 38.854 157 82 2 198 354 46 188 3.76e-28 113
MsG0480020936.01.T01 MTR_0063s0100 35.583 163 98 3 109 271 57 212 5.70e-28 115
MsG0480020936.01.T01 MTR_5g085370 45.133 113 62 0 230 342 1 113 4.06e-27 114
MsG0480020936.01.T01 MTR_8g067570 45.098 102 56 0 230 331 1 102 2.26e-26 103
MsG0480020936.01.T01 MTR_1g033070 44.348 115 62 1 132 244 38 152 3.30e-26 107
MsG0480020936.01.T01 MTR_3g091430 29.412 323 141 8 130 444 11 254 5.10e-26 108
MsG0480020936.01.T01 MTR_5g060720 48.421 95 49 0 217 311 63 157 6.05e-26 110
MsG0480020936.01.T01 MTR_2g034230 43.966 116 62 1 126 238 44 159 5.36e-25 102
MsG0480020936.01.T01 MTR_8g063620 44.231 104 57 1 131 233 33 136 1.22e-24 100
MsG0480020936.01.T01 MTR_2g074890 47.778 90 47 0 166 255 15 104 7.67e-24 105
MsG0480020936.01.T01 MTR_4g031470 45.902 122 54 3 256 373 34 147 1.70e-23 98.2
MsG0480020936.01.T01 MTR_1g007020 36.047 172 71 3 217 385 43 178 7.78e-23 101
MsG0480020936.01.T01 MTR_7g023870 53.165 79 37 0 240 318 59 137 3.47e-22 93.6
MsG0480020936.01.T01 MTR_7g070750 43.956 91 51 0 212 302 1 91 6.20e-22 96.3
MsG0480020936.01.T01 MTR_7g063170 34.722 144 48 1 147 290 12 109 8.97e-22 90.9
MsG0480020936.01.T01 MTR_8g445160 46.296 108 57 1 237 344 2 108 1.43e-21 99.4
MsG0480020936.01.T01 MTR_5g079060 38.583 127 71 1 114 233 2 128 2.04e-21 95.1
MsG0480020936.01.T01 MTR_6g076110 42.857 133 73 1 114 246 46 175 2.06e-21 93.2
MsG0480020936.01.T01 MTR_6g016995 46.739 92 49 0 184 275 1 92 5.56e-21 88.6
MsG0480020936.01.T01 MTR_3g071850 44.340 106 57 1 131 234 423 528 6.81e-21 97.8
MsG0480020936.01.T01 MTR_5g060840 39.815 108 52 1 212 319 1 95 3.53e-20 90.5
MsG0480020936.01.T01 MTR_5g460950 39.815 108 52 1 212 319 1 95 3.53e-20 90.5
MsG0480020936.01.T01 MTR_7g063750 52.174 69 33 0 165 233 144 212 1.53e-19 88.2
MsG0480020936.01.T01 MTR_6g042480 32.886 149 81 2 110 255 11 143 2.29e-19 89.0
MsG0480020936.01.T01 MTR_1g032900 40.625 96 55 1 131 224 43 138 1.03e-18 89.7
MsG0480020936.01.T01 MTR_5g037100 40.000 110 66 0 147 256 2 111 1.32e-18 82.0
MsG0480020936.01.T01 MTR_5g048840 43.878 98 52 2 123 218 24 120 1.38e-18 87.0
MsG0480020936.01.T01 MTR_5g034920 26.609 233 107 4 131 363 2 170 2.20e-18 88.6
MsG0480020936.01.T01 MTR_5g065660 32.051 156 75 3 189 340 70 198 1.92e-17 82.8
MsG0480020936.01.T01 MTR_8g069240 49.333 75 38 0 174 248 77 151 2.16e-17 81.3
MsG0480020936.01.T01 MTR_5g047910 30.000 180 78 4 159 333 25 161 5.43e-17 82.0
MsG0480020936.01.T01 MTR_7g053210 45.349 86 42 2 110 192 25 108 1.84e-16 75.9
MsG0480020936.01.T01 MTR_4g009745 37.963 108 65 2 106 212 106 212 3.72e-16 79.3
MsG0480020936.01.T01 MTR_2g043290 45.679 81 44 0 257 337 1 81 4.85e-16 79.3
MsG0480020936.01.T01 MTR_2g054220 62.791 43 16 0 209 251 6 48 6.57e-16 72.8
MsG0480020936.01.T01 MTR_8g061220 49.231 65 33 0 267 331 2 66 1.06e-15 74.3
MsG0480020936.01.T01 MTR_1g055115 62.903 62 21 2 507 566 1 62 1.95e-15 73.2
MsG0480020936.01.T01 MTR_6g464500 38.136 118 70 2 109 223 6 123 2.52e-15 77.4
MsG0480020936.01.T01 MTR_4g060870 40.659 91 50 1 277 363 111 201 9.65e-15 76.6
MsG0480020936.01.T01 MTR_4g060870 45.946 74 40 0 145 218 54 127 2.41e-13 72.4
MsG0480020936.01.T01 MTR_5g071600 46.939 98 41 3 109 205 71 158 1.15e-14 72.4
MsG0480020936.01.T01 MTR_7g037570 36.538 104 63 1 107 207 2 105 3.70e-14 69.3
MsG0480020936.01.T01 MTR_6g012440 50.847 59 29 0 284 342 20 78 2.95e-13 66.2
MsG0480020936.01.T01 MTR_3g032560 50.877 57 28 0 218 274 38 94 4.74e-13 67.4
MsG0480020936.01.T01 MTR_6g003940 45.455 66 36 0 148 213 25 90 6.72e-13 69.3
MsG0480020936.01.T01 MTR_5g036050 44.615 65 26 1 182 246 1 55 7.94e-13 64.7
MsG0480020936.01.T01 MTR_7g060590 42.029 69 40 0 267 335 100 168 9.05e-12 67.4
MsG0480020936.01.T01 MTR_1g052605 69.565 46 14 0 515 560 41 86 1.02e-11 63.5
MsG0480020936.01.T01 MTR_2g038110 39.024 82 45 1 294 375 2 78 1.22e-11 63.5
MsG0480020936.01.T01 MTR_7g451180 42.466 73 42 0 130 202 17 89 1.35e-11 63.5
MsG0480020936.01.T01 MTR_8g046080 39.535 86 49 3 114 196 7 92 5.44e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480020936.01.T01 AT2G01050 28.000 200 140 1 196 395 95 290 7.73e-22 99.8

Find 121 sgRNAs with CRISPR-Local

Find 200 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCCCTTTCAATCAAAATTT+TGG 0.082962 4:+50742776 MsG0480020936.01.T01:CDS
TGGTCATCACCTTGTATTTC+AGG 0.152096 4:-50743647 None:intergenic
ATGCTAAACTGTCACAATTA+TGG 0.243388 4:+50742898 MsG0480020936.01.T01:CDS
ACTATCTTCCTCTAGAATAT+TGG 0.248627 4:+50743123 MsG0480020936.01.T01:CDS
TACCTTTCAAACAAGGTTTC+GGG 0.261231 4:-50742752 None:intergenic
TTTGAGATTGCTGGGGCTAT+TGG 0.280511 4:+50743161 MsG0480020936.01.T01:CDS
TGAGATATTTGCTATGAAAA+AGG 0.294945 4:+50741252 MsG0480020936.01.T01:CDS
TGTTTCACTTGTAATTCTAT+TGG 0.302881 4:+50743350 MsG0480020936.01.T01:CDS
TTTATAGTCAAAGTTAGAAT+TGG 0.314840 4:-50742157 None:intergenic
GCATCATTGCCCTTCAAATA+TGG 0.316110 4:-50743842 None:intergenic
TCCTAACATCGCTCATGATT+TGG 0.316931 4:+50743808 MsG0480020936.01.T01:CDS
GTCTTAGACACCTCAATAAA+AGG 0.326246 4:-50743956 None:intergenic
TCTTGACATAATGAGGTCTA+AGG 0.327248 4:+50743514 MsG0480020936.01.T01:CDS
TGTAAGTCTTTATATGATAA+AGG 0.327429 4:-50742876 None:intergenic
TTACCTTTCAAACAAGGTTT+CGG 0.328777 4:-50742753 None:intergenic
AGATGGAACTCAAATCAATT+TGG 0.329517 4:-50744040 None:intergenic
CTCATTATGTCAAGAATAAT+AGG 0.329558 4:-50743506 None:intergenic
CTTTCAACACACAGAGTATC+AGG 0.333612 4:-50743275 None:intergenic
CTAACTTTGACTATAAATCT+AGG 0.340664 4:+50742163 MsG0480020936.01.T01:CDS
CGCTTTCGTTGGGGCAATGC+AGG 0.355284 4:+50743598 MsG0480020936.01.T01:CDS
CATATGTCCTTGGCCTTGCT+TGG 0.358846 4:+50742635 MsG0480020936.01.T01:CDS
TTGTTAAGAATGTCCCTAAA+AGG 0.359417 4:+50743447 MsG0480020936.01.T01:CDS
ATATGTGCATAGTTGGTTCT+TGG 0.359921 4:+50743690 MsG0480020936.01.T01:CDS
TTCTGCTTTGTAGGTTTCAA+AGG 0.360272 4:+50742586 MsG0480020936.01.T01:intron
TATATTCTAGCGCTTTCGTT+GGG 0.392773 4:+50743588 MsG0480020936.01.T01:CDS
TTACAAGTGAAACAAAAGTA+TGG 0.398016 4:-50743341 None:intergenic
AATACTAGAAACAATTCATT+TGG 0.398751 4:+50743206 MsG0480020936.01.T01:CDS
GTAGATTAGTGTTGTCTAAA+GGG 0.399995 4:+50742847 MsG0480020936.01.T01:CDS
AGTAACAACTAATGTGTTAG+TGG 0.400989 4:+50743538 MsG0480020936.01.T01:CDS
AAGGGCTATGTCTGGTCTTA+CGG 0.402157 4:+50742605 MsG0480020936.01.T01:CDS
TAGCCCCAGCAATCTCAAAA+AGG 0.405181 4:-50743157 None:intergenic
GAACCAACTATGCACATATC+AGG 0.411390 4:-50743686 None:intergenic
ACGCTTATCGCGCTGGTCTC+CGG 0.421826 4:+50743046 MsG0480020936.01.T01:CDS
CGGCGCAATTCATATGTCCT+TGG 0.430358 4:+50742625 MsG0480020936.01.T01:CDS
TGCAATTAGCTAGACGAGAT+TGG 0.433941 4:-50742809 None:intergenic
ATTCCTGATATGTGCATAGT+TGG 0.449921 4:+50743683 MsG0480020936.01.T01:CDS
CTCAAACACACAGTCAGGTA+TGG 0.453274 4:+50743090 MsG0480020936.01.T01:CDS
ATTTCAGGCATAATTTCAAC+AGG 0.453486 4:-50743632 None:intergenic
TCTTACAATGATCCGATGAA+TGG 0.454900 4:-50743373 None:intergenic
TCCAAATCATGAGCGATGTT+AGG 0.463430 4:-50743809 None:intergenic
ACAGGCTTCGGAGTAGGCTT+CGG 0.465181 4:-50742669 None:intergenic
CTCCCGAAACCTTGTTTGAA+AGG 0.465523 4:+50742750 MsG0480020936.01.T01:CDS
CTTAGAAGTGTCTGGTCAAA+GGG 0.466466 4:+50742996 MsG0480020936.01.T01:CDS
CTATTATTCTTGACATAATG+AGG 0.467732 4:+50743507 MsG0480020936.01.T01:CDS
CGCGATAAGCGTAACACTCC+CGG 0.469388 4:-50743035 None:intergenic
TCTGCTTTGTAGGTTTCAAA+GGG 0.471933 4:+50742587 MsG0480020936.01.T01:intron
GGTAGATTAGTGTTGTCTAA+AGG 0.473438 4:+50742846 MsG0480020936.01.T01:CDS
AACATAAACCATACCAAGAT+GGG 0.476188 4:-50743751 None:intergenic
TCTAGGTTTCAATTCAATGC+GGG 0.476832 4:+50742180 MsG0480020936.01.T01:CDS
AGGTTTCAAAGGGCTATGTC+TGG 0.480528 4:+50742597 MsG0480020936.01.T01:intron
TATGGAAACCTCTTGATCAA+TGG 0.480663 4:+50742916 MsG0480020936.01.T01:CDS
CAACAAAATTGCTCGTGAAA+AGG 0.481062 4:+50743406 MsG0480020936.01.T01:CDS
TTTATGTTCTTCCAATGTCA+TGG 0.485328 4:+50743766 MsG0480020936.01.T01:CDS
GGGGATCTTGAATATAATCT+AGG 0.485971 4:-50743730 None:intergenic
CAGGAATATCGTTGCTCTGT+TGG 0.500136 4:-50743667 None:intergenic
GAGTGTTACGCTTATCGCGC+TGG 0.506292 4:+50743039 MsG0480020936.01.T01:CDS
TCAATTTGGAGGTCTGCCCC+TGG 0.509404 4:-50744026 None:intergenic
ATGCTTGTGCAAGTGTGCCT+CGG 0.514980 4:+50743861 MsG0480020936.01.T01:CDS
TGCTTGTGCAAGTGTGCCTC+GGG 0.515445 4:+50743862 MsG0480020936.01.T01:CDS
GGCGCTTGGAACTTGAAGCC+GGG 0.517190 4:+50743017 MsG0480020936.01.T01:CDS
ACAGACTCAAACACACAGTC+AGG 0.520344 4:+50743085 MsG0480020936.01.T01:CDS
ATCATCTTCCATTGATCAAG+AGG 0.520684 4:-50742924 None:intergenic
GGGCGCTTGGAACTTGAAGC+CGG 0.522366 4:+50743016 MsG0480020936.01.T01:CDS
TAATTCTATTGGCCATTCAT+CGG 0.522971 4:+50743361 MsG0480020936.01.T01:CDS
GAGGGAAAGTCGCAAGGAGT+TGG 0.527240 4:+50741095 MsG0480020936.01.T01:CDS
GGAGTTTACTTTGCTTGCCA+AGG 0.527345 4:+50741168 MsG0480020936.01.T01:CDS
CTACGAGTTGAGACAGGCTT+CGG 0.527444 4:-50742681 None:intergenic
GAACATAAACCATACCAAGA+TGG 0.528700 4:-50743752 None:intergenic
TGGAACTCAAATCAATTTGG+AGG 0.528773 4:-50744037 None:intergenic
GGAGTTGGTTATCTTCAAGA+TGG 0.530353 4:+50741110 MsG0480020936.01.T01:CDS
ATCATTAGAAACCATGACAT+TGG 0.533127 4:-50743777 None:intergenic
GTGTCTGGTCAAAGGGCGCT+TGG 0.535363 4:+50743003 MsG0480020936.01.T01:CDS
GTTGAGACAGGCTTCGGAGT+AGG 0.539876 4:-50742675 None:intergenic
CGGATGATCTTAGAAGTGTC+TGG 0.542094 4:+50742988 MsG0480020936.01.T01:CDS
TAGAATATAGTTCTTCCTCA+AGG 0.544732 4:-50743574 None:intergenic
CTATATTCTAGCGCTTTCGT+TGG 0.544791 4:+50743587 MsG0480020936.01.T01:CDS
TCTTAGAAGTGTCTGGTCAA+AGG 0.547190 4:+50742995 MsG0480020936.01.T01:CDS
GGAGATTGAAAACGTGCAGA+TGG 0.555360 4:+50742206 MsG0480020936.01.T01:CDS
AAGATGATTCCTATGGGTAG+AGG 0.560662 4:+50742939 MsG0480020936.01.T01:CDS
TCAATGGAAGATGATTCCTA+TGG 0.563612 4:+50742932 MsG0480020936.01.T01:CDS
GCAAAACTACGAGTTGAGAC+AGG 0.566342 4:-50742687 None:intergenic
AGGTTCATAACACTCACTCC+AGG 0.571899 4:+50744008 MsG0480020936.01.T01:CDS
TGTGAGACCAAGCAAGGCCA+AGG 0.571982 4:-50742642 None:intergenic
TGCGCAAGGCTGTAGTGCTG+TGG 0.573218 4:+50743472 MsG0480020936.01.T01:CDS
TAGATTAGTGTTGTCTAAAG+GGG 0.575045 4:+50742848 MsG0480020936.01.T01:CDS
TGTTTAAAGAGATTAAAATC+CGG 0.578547 4:-50743065 None:intergenic
TTCTTGGAGTGATGCTGTGA+CGG 0.578821 4:+50743706 MsG0480020936.01.T01:CDS
GGTTCATAACACTCACTCCA+GGG 0.579227 4:+50744009 MsG0480020936.01.T01:CDS
GCTCTTCTTCAGCAATAGAA+CGG 0.584182 4:-50743934 None:intergenic
CTTGTCGGGTTACTGTTCAT+CGG 0.589596 4:-50742232 None:intergenic
GTTTCAATTCAATGCGGGGT+GGG 0.592621 4:+50742185 MsG0480020936.01.T01:CDS
CTATCTTGCCAATATTCTAG+AGG 0.593024 4:-50743131 None:intergenic
TCAAACACACAGTCAGGTAT+GGG 0.593350 4:+50743091 MsG0480020936.01.T01:CDS
CAATGGAAGATGATTCCTAT+GGG 0.594132 4:+50742933 MsG0480020936.01.T01:CDS
AGGGAATTACCTTTCAAACA+AGG 0.595343 4:-50742759 None:intergenic
AATTGCAACAATTACCTCCA+TGG 0.596470 4:+50742825 MsG0480020936.01.T01:CDS
GTAACAACTAATGTGTTAGT+GGG 0.597567 4:+50743539 MsG0480020936.01.T01:CDS
GTCCCTAAAAGGCATGCGCA+AGG 0.600506 4:+50743458 MsG0480020936.01.T01:CDS
GTTTCGGGAGATCAGACAAA+GGG 0.603663 4:-50742737 None:intergenic
TACTGACGAGGAAGAAAGAG+AGG 0.603696 4:+50743889 MsG0480020936.01.T01:CDS
ATATTCTAGCGCTTTCGTTG+GGG 0.607985 4:+50743589 MsG0480020936.01.T01:CDS
GGTGCTCAAGATGCTAGCTA+AGG 0.614804 4:+50741147 MsG0480020936.01.T01:CDS
GGCGTATGTGAGACCAAGCA+AGG 0.620792 4:-50742648 None:intergenic
GAAATTATGCCTGAAATACA+AGG 0.622154 4:+50743638 MsG0480020936.01.T01:CDS
CAAATATCTCAATGCGAGCA+AGG 0.629033 4:-50741240 None:intergenic
ATCTAGGTTTCAATTCAATG+CGG 0.634030 4:+50742179 MsG0480020936.01.T01:CDS
CTAGGTTTCAATTCAATGCG+GGG 0.634068 4:+50742181 MsG0480020936.01.T01:CDS
ATAAGGGTGATGATTTCAAG+AGG 0.635828 4:+50741076 None:intergenic
GGTTTCAATTCAATGCGGGG+TGG 0.638359 4:+50742184 MsG0480020936.01.T01:CDS
ACATAAACCATACCAAGATG+GGG 0.640240 4:-50743750 None:intergenic
TAAGGGTGATGATTTCAAGA+GGG 0.644080 4:+50741077 None:intergenic
TTTCAAGAGGGAAAGTCGCA+AGG 0.644966 4:+50741089 MsG0480020936.01.T01:CDS
CAAGTGAAACAAAAGTATGG+AGG 0.646094 4:-50743338 None:intergenic
GGGTGATGTTATAAACCTTG+AGG 0.654994 4:+50743559 MsG0480020936.01.T01:CDS
TAGACAACACTAATCTACCA+TGG 0.655330 4:-50742842 None:intergenic
TCCTCGTCAGTATAAACCCG+AGG 0.671064 4:-50743878 None:intergenic
GCCTCGGGTTTATACTGACG+AGG 0.674771 4:+50743877 MsG0480020936.01.T01:CDS
GTTCATAACACTCACTCCAG+GGG 0.676846 4:+50744010 MsG0480020936.01.T01:CDS
CATAAACCATACCAAGATGG+GGG 0.679556 4:-50743749 None:intergenic
GGTTTCGGGAGATCAGACAA+AGG 0.694854 4:-50742738 None:intergenic
ACAACACTAATCTACCATGG+AGG 0.759442 4:-50742839 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATATATATATATATA+AGG + Chr4:50741572-50741591 MsG0480020936.01.T01:intron 0.0%
!!! ATATTTTATTTAAATTTTTA+TGG + Chr4:50741738-50741757 MsG0480020936.01.T01:intron 0.0%
!! AATTTAAATAAAATATTGAG+TGG - Chr4:50741734-50741753 None:intergenic 10.0%
!!! AATCTTATTTTATGATTAAA+AGG + Chr4:50741835-50741854 MsG0480020936.01.T01:intron 10.0%
!!! TTTAAATCCAATATTTTATT+TGG + Chr4:50741677-50741696 MsG0480020936.01.T01:intron 10.0%
!! ATTTATGCCAAATAAAATAT+TGG - Chr4:50741687-50741706 None:intergenic 15.0%
!! AAGTTAATTCATAATTCATC+AGG - Chr4:50741486-50741505 None:intergenic 20.0%
!! AATACTAGAAACAATTCATT+TGG + Chr4:50743206-50743225 MsG0480020936.01.T01:CDS 20.0%
!! AATCACTTAATTCAATAACT+TGG - Chr4:50741362-50741381 None:intergenic 20.0%
!! AGTTAATTCATAATTCATCA+GGG - Chr4:50741485-50741504 None:intergenic 20.0%
!! CCTAAAAAAAAAAAATCAAC+TGG - Chr4:50741863-50741882 None:intergenic 20.0%
!! GAAAAATCAAATATGATTCT+TGG + Chr4:50741413-50741432 MsG0480020936.01.T01:intron 20.0%
!! TGATTAATAAGTTTCGTTTA+AGG + Chr4:50741377-50741396 MsG0480020936.01.T01:intron 20.0%
!! TGTAAGTCTTTATATGATAA+AGG - Chr4:50742879-50742898 None:intergenic 20.0%
!! TGTTTAAAGAGATTAAAATC+CGG - Chr4:50743068-50743087 None:intergenic 20.0%
!! TTTATAGTCAAAGTTAGAAT+TGG - Chr4:50742160-50742179 None:intergenic 20.0%
!!! CCAGTTGATTTTTTTTTTTT+AGG + Chr4:50741860-50741879 MsG0480020936.01.T01:intron 20.0%
!!! GTATTCTCATCAATTTTTAT+AGG - Chr4:50743191-50743210 None:intergenic 20.0%
!!! TAAATATCTGAACAAACTTT+TGG + Chr4:50741702-50741721 MsG0480020936.01.T01:intron 20.0%
! AAAAATATTGAGAATGAACG+TGG - Chr4:50741641-50741660 None:intergenic 25.0%
! CTAACTTTGACTATAAATCT+AGG + Chr4:50742163-50742182 MsG0480020936.01.T01:CDS 25.0%
! CTATTATTCTTGACATAATG+AGG + Chr4:50743507-50743526 MsG0480020936.01.T01:CDS 25.0%
! CTCATTATGTCAAGAATAAT+AGG - Chr4:50743509-50743528 None:intergenic 25.0%
! TAACTTCACCTAAGAATTAA+GGG + Chr4:50741500-50741519 MsG0480020936.01.T01:intron 25.0%
! TGTTTCACTTGTAATTCTAT+TGG + Chr4:50743350-50743369 MsG0480020936.01.T01:CDS 25.0%
! TTAACTTCACCTAAGAATTA+AGG + Chr4:50741499-50741518 MsG0480020936.01.T01:intron 25.0%
! TTACAAGTGAAACAAAAGTA+TGG - Chr4:50743344-50743363 None:intergenic 25.0%
!! CTTAACAAGATTTTCTTTAG+TGG - Chr4:50743435-50743454 None:intergenic 25.0%
!! TTCCCTTTCAATCAAAATTT+TGG + Chr4:50742776-50742795 MsG0480020936.01.T01:CDS 25.0%
!!! ACACACACTATTGATTTAAA+AGG - Chr4:50741551-50741570 None:intergenic 25.0%
!!! CTCCAAAATTTTGATTGAAA+GGG - Chr4:50742781-50742800 None:intergenic 25.0%
!!! TGAGATATTTGCTATGAAAA+AGG + Chr4:50741252-50741271 MsG0480020936.01.T01:CDS 25.0%
!!! TTTTTTGTTTTCTGCTTTGT+AGG + Chr4:50742577-50742596 MsG0480020936.01.T01:intron 25.0%
AACATAAACCATACCAAGAT+GGG - Chr4:50743754-50743773 None:intergenic 30.0%
AGTAACAACTAATGTGTTAG+TGG + Chr4:50743538-50743557 MsG0480020936.01.T01:CDS 30.0%
ATCATTAGAAACCATGACAT+TGG - Chr4:50743780-50743799 None:intergenic 30.0%
ATCTAGGTTTCAATTCAATG+CGG + Chr4:50742179-50742198 MsG0480020936.01.T01:CDS 30.0%
ATGCTAAACTGTCACAATTA+TGG + Chr4:50742898-50742917 MsG0480020936.01.T01:CDS 30.0%
ATTTCAGGCATAATTTCAAC+AGG - Chr4:50743635-50743654 None:intergenic 30.0%
GAAATTATGCCTGAAATACA+AGG + Chr4:50743638-50743657 MsG0480020936.01.T01:CDS 30.0%
GTAACAACTAATGTGTTAGT+GGG + Chr4:50743539-50743558 MsG0480020936.01.T01:CDS 30.0%
GTAGATTAGTGTTGTCTAAA+GGG + Chr4:50742847-50742866 MsG0480020936.01.T01:CDS 30.0%
TAATTCTATTGGCCATTCAT+CGG + Chr4:50743361-50743380 MsG0480020936.01.T01:CDS 30.0%
TAGAATATAGTTCTTCCTCA+AGG - Chr4:50743577-50743596 None:intergenic 30.0%
TAGATTAGTGTTGTCTAAAG+GGG + Chr4:50742848-50742867 MsG0480020936.01.T01:CDS 30.0%
TTACCTTTCAAACAAGGTTT+CGG - Chr4:50742756-50742775 None:intergenic 30.0%
TTGTTAAGAATGTCCCTAAA+AGG + Chr4:50743447-50743466 MsG0480020936.01.T01:CDS 30.0%
TTTATGTTCTTCCAATGTCA+TGG + Chr4:50743766-50743785 MsG0480020936.01.T01:CDS 30.0%
! AATTAAGGGATGCAAACTTT+TGG + Chr4:50741514-50741533 MsG0480020936.01.T01:intron 30.0%
! CCTTTCAATCAAAATTTTGG+AGG + Chr4:50742779-50742798 MsG0480020936.01.T01:CDS 30.0%
! CTAGTAGATATCAATTTTGC+TGG + Chr4:50743245-50743264 MsG0480020936.01.T01:CDS 30.0%
!! ACTATCTTCCTCTAGAATAT+TGG + Chr4:50743123-50743142 MsG0480020936.01.T01:CDS 30.0%
!! TGAATTTCGCTTTTCAAATG+CGG + Chr4:50742968-50742987 MsG0480020936.01.T01:CDS 30.0%
!!! CCTCCAAAATTTTGATTGAA+AGG - Chr4:50742782-50742801 None:intergenic 30.0%
!!! TGTTTTTGTTCCTTGTTGTT+GGG + Chr4:50742453-50742472 MsG0480020936.01.T01:intron 30.0%
AATTGCAACAATTACCTCCA+TGG + Chr4:50742825-50742844 MsG0480020936.01.T01:CDS 35.0%
ACATAAACCATACCAAGATG+GGG - Chr4:50743753-50743772 None:intergenic 35.0%
ACCCAGAATCGAACAAATAA+AGG - Chr4:50742422-50742441 None:intergenic 35.0%
AGGGAATTACCTTTCAAACA+AGG - Chr4:50742762-50742781 None:intergenic 35.0%
ATCATCTTCCATTGATCAAG+AGG - Chr4:50742927-50742946 None:intergenic 35.0%
ATGATTCTTGGTGAAACTCA+TGG + Chr4:50741425-50741444 MsG0480020936.01.T01:intron 35.0%
ATTCCTGATATGTGCATAGT+TGG + Chr4:50743683-50743702 MsG0480020936.01.T01:CDS 35.0%
CAACAAAATTGCTCGTGAAA+AGG + Chr4:50743406-50743425 MsG0480020936.01.T01:CDS 35.0%
CAATGGAAGATGATTCCTAT+GGG + Chr4:50742933-50742952 MsG0480020936.01.T01:CDS 35.0%
CTATCTTGCCAATATTCTAG+AGG - Chr4:50743134-50743153 None:intergenic 35.0%
GAACAGATTGCAGTATCAAT+CGG - Chr4:50742480-50742499 None:intergenic 35.0%
GAACATAAACCATACCAAGA+TGG - Chr4:50743755-50743774 None:intergenic 35.0%
GGGGATCTTGAATATAATCT+AGG - Chr4:50743733-50743752 None:intergenic 35.0%
GGTAGATTAGTGTTGTCTAA+AGG + Chr4:50742846-50742865 MsG0480020936.01.T01:CDS 35.0%
GTCTTAGACACCTCAATAAA+AGG - Chr4:50743959-50743978 None:intergenic 35.0%
GTTTGCATCCCTTAATTCTT+AGG - Chr4:50741511-50741530 None:intergenic 35.0%
TACCTTTCAAACAAGGTTTC+GGG - Chr4:50742755-50742774 None:intergenic 35.0%
TAGACAACACTAATCTACCA+TGG - Chr4:50742845-50742864 None:intergenic 35.0%
TATATTCTAGCGCTTTCGTT+GGG + Chr4:50743588-50743607 MsG0480020936.01.T01:CDS 35.0%
TATGGAAACCTCTTGATCAA+TGG + Chr4:50742916-50742935 MsG0480020936.01.T01:CDS 35.0%
TCAAAAAAACCTCTACCCAT+AGG - Chr4:50742951-50742970 None:intergenic 35.0%
TCAATGGAAGATGATTCCTA+TGG + Chr4:50742932-50742951 MsG0480020936.01.T01:CDS 35.0%
TCTAGGTTTCAATTCAATGC+GGG + Chr4:50742180-50742199 MsG0480020936.01.T01:CDS 35.0%
TCTGCTTTGTAGGTTTCAAA+GGG + Chr4:50742587-50742606 MsG0480020936.01.T01:intron 35.0%
TCTTACAATGATCCGATGAA+TGG - Chr4:50743376-50743395 None:intergenic 35.0%
TCTTGACATAATGAGGTCTA+AGG + Chr4:50743514-50743533 MsG0480020936.01.T01:CDS 35.0%
TTCTGCTTTGTAGGTTTCAA+AGG + Chr4:50742586-50742605 MsG0480020936.01.T01:intron 35.0%
! ATATGTGCATAGTTGGTTCT+TGG + Chr4:50743690-50743709 MsG0480020936.01.T01:CDS 35.0%
! ATTTTGCGGCCATATTTGAA+GGG + Chr4:50743833-50743852 MsG0480020936.01.T01:CDS 35.0%
! CAAGTGAAACAAAAGTATGG+AGG - Chr4:50743341-50743360 None:intergenic 35.0%
! CTTTTCACGAGCAATTTTGT+TGG - Chr4:50743408-50743427 None:intergenic 35.0%
! GCCTTTATTTGTTCGATTCT+GGG + Chr4:50742418-50742437 MsG0480020936.01.T01:intron 35.0%
! TGAAGAAGAGCCTTTTATTG+AGG + Chr4:50743946-50743965 MsG0480020936.01.T01:CDS 35.0%
! TGCCTTTATTTGTTCGATTC+TGG + Chr4:50742417-50742436 MsG0480020936.01.T01:intron 35.0%
!! CTCATGATTTGGAGATTTTG+CGG + Chr4:50743819-50743838 MsG0480020936.01.T01:CDS 35.0%
!! GTGTTTTTGTTCCTTGTTGT+TGG + Chr4:50742452-50742471 MsG0480020936.01.T01:intron 35.0%
!!! AATCCTTTTTGAGATTGCTG+GGG + Chr4:50743154-50743173 MsG0480020936.01.T01:CDS 35.0%
!!! AGAATCCTTTTTGAGATTGC+TGG + Chr4:50743152-50743171 MsG0480020936.01.T01:CDS 35.0%
!!! GAATCCTTTTTGAGATTGCT+GGG + Chr4:50743153-50743172 MsG0480020936.01.T01:CDS 35.0%
AAACGAAAAGGAGAGAGATC+TGG - Chr4:50742307-50742326 None:intergenic 40.0%
AAGATGATTCCTATGGGTAG+AGG + Chr4:50742939-50742958 MsG0480020936.01.T01:CDS 40.0%
ACAACACTAATCTACCATGG+AGG - Chr4:50742842-50742861 None:intergenic 40.0%
ATATTCAAGATCCCCCATCT+TGG + Chr4:50743738-50743757 MsG0480020936.01.T01:CDS 40.0%
ATATTCTAGCGCTTTCGTTG+GGG + Chr4:50743589-50743608 MsG0480020936.01.T01:CDS 40.0%
CAAATATCTCAATGCGAGCA+AGG - Chr4:50741243-50741262 None:intergenic 40.0%
CATAAACCATACCAAGATGG+GGG - Chr4:50743752-50743771 None:intergenic 40.0%
CATGGTCAACTTTACTTTCG+TGG + Chr4:50741443-50741462 MsG0480020936.01.T01:intron 40.0%
CTAGGTTTCAATTCAATGCG+GGG + Chr4:50742181-50742200 MsG0480020936.01.T01:CDS 40.0%
CTATATTCTAGCGCTTTCGT+TGG + Chr4:50743587-50743606 MsG0480020936.01.T01:CDS 40.0%
GAACCAACTATGCACATATC+AGG - Chr4:50743689-50743708 None:intergenic 40.0%
GCATCATTGCCCTTCAAATA+TGG - Chr4:50743845-50743864 None:intergenic 40.0%
GCTCTTCTTCAGCAATAGAA+CGG - Chr4:50743937-50743956 None:intergenic 40.0%
GGGTGATGTTATAAACCTTG+AGG + Chr4:50743559-50743578 MsG0480020936.01.T01:CDS 40.0%
TCAAACACACAGTCAGGTAT+GGG + Chr4:50743091-50743110 MsG0480020936.01.T01:CDS 40.0%
TCCAAATCATGAGCGATGTT+AGG - Chr4:50743812-50743831 None:intergenic 40.0%
TCCTAACATCGCTCATGATT+TGG + Chr4:50743808-50743827 MsG0480020936.01.T01:CDS 40.0%
TGCAATTAGCTAGACGAGAT+TGG - Chr4:50742812-50742831 None:intergenic 40.0%
TGGTCATCACCTTGTATTTC+AGG - Chr4:50743650-50743669 None:intergenic 40.0%
! ATCTCTCTCCTTTTCGTTTC+TGG + Chr4:50742308-50742327 MsG0480020936.01.T01:intron 40.0%
! CTTTCAACACACAGAGTATC+AGG - Chr4:50743278-50743297 None:intergenic 40.0%
! GATTTTGCGGCCATATTTGA+AGG + Chr4:50743832-50743851 MsG0480020936.01.T01:CDS 40.0%
! GGAGTTGGTTATCTTCAAGA+TGG + Chr4:50741110-50741129 MsG0480020936.01.T01:CDS 40.0%
! TCTCTCTCCTTTTCGTTTCT+GGG + Chr4:50742309-50742328 MsG0480020936.01.T01:intron 40.0%
!! CTTAGAAGTGTCTGGTCAAA+GGG + Chr4:50742996-50743015 MsG0480020936.01.T01:CDS 40.0%
!! TCTTAGAAGTGTCTGGTCAA+AGG + Chr4:50742995-50743014 MsG0480020936.01.T01:CDS 40.0%
AATCGACACCGTGAGTCAAT+CGG - Chr4:50742382-50742401 None:intergenic 45.0%
ACAGACTCAAACACACAGTC+AGG + Chr4:50743085-50743104 MsG0480020936.01.T01:CDS 45.0%
AGGAGAGAGATCTGGAGAAA+CGG - Chr4:50742299-50742318 None:intergenic 45.0%
AGGTTCATAACACTCACTCC+AGG + Chr4:50744008-50744027 MsG0480020936.01.T01:CDS 45.0%
AGGTTTCAAAGGGCTATGTC+TGG + Chr4:50742597-50742616 MsG0480020936.01.T01:intron 45.0%
ATCAATCGGACCCAACAACA+AGG - Chr4:50742466-50742485 None:intergenic 45.0%
CAGGAATATCGTTGCTCTGT+TGG - Chr4:50743670-50743689 None:intergenic 45.0%
CTCAAACACACAGTCAGGTA+TGG + Chr4:50743090-50743109 MsG0480020936.01.T01:CDS 45.0%
CTTGTCGGGTTACTGTTCAT+CGG - Chr4:50742235-50742254 None:intergenic 45.0%
GACTCTCTGCTTCATGTTCT+TGG + Chr4:50742354-50742373 MsG0480020936.01.T01:intron 45.0%
GATGAACAGTAACCCGACAA+GGG + Chr4:50742234-50742253 MsG0480020936.01.T01:intron 45.0%
GGAGATTGAAAACGTGCAGA+TGG + Chr4:50742206-50742225 MsG0480020936.01.T01:CDS 45.0%
GGAGTTTACTTTGCTTGCCA+AGG + Chr4:50741168-50741187 MsG0480020936.01.T01:CDS 45.0%
GGTTCATAACACTCACTCCA+GGG + Chr4:50744009-50744028 MsG0480020936.01.T01:CDS 45.0%
GTTCATAACACTCACTCCAG+GGG + Chr4:50744010-50744029 MsG0480020936.01.T01:CDS 45.0%
GTTCGATTCTGGGTGTGATT+TGG + Chr4:50742428-50742447 MsG0480020936.01.T01:intron 45.0%
GTTTCAATTCAATGCGGGGT+GGG + Chr4:50742185-50742204 MsG0480020936.01.T01:CDS 45.0%
GTTTCGGGAGATCAGACAAA+GGG - Chr4:50742740-50742759 None:intergenic 45.0%
TAACCCGACAAGGGTTTGAA+CGG + Chr4:50742243-50742262 MsG0480020936.01.T01:intron 45.0%
TACTGACGAGGAAGAAAGAG+AGG + Chr4:50743889-50743908 MsG0480020936.01.T01:CDS 45.0%
TAGCCCCAGCAATCTCAAAA+AGG - Chr4:50743160-50743179 None:intergenic 45.0%
TCCAAAAAGACACGACTCCT+TGG - Chr4:50741188-50741207 None:intergenic 45.0%
TTCTTGGAGTGATGCTGTGA+CGG + Chr4:50743706-50743725 MsG0480020936.01.T01:CDS 45.0%
TTTCAAGAGGGAAAGTCGCA+AGG + Chr4:50741089-50741108 MsG0480020936.01.T01:CDS 45.0%
! AGGGATGCAAACTTTTGGTG+TGG + Chr4:50741519-50741538 MsG0480020936.01.T01:intron 45.0%
! CTCCCGAAACCTTGTTTGAA+AGG + Chr4:50742750-50742769 MsG0480020936.01.T01:CDS 45.0%
! GAACGTGCAGAAACGTTTTC+AGG + Chr4:50743988-50744007 MsG0480020936.01.T01:CDS 45.0%
! GCAAAACTACGAGTTGAGAC+AGG - Chr4:50742690-50742709 None:intergenic 45.0%
! TCACGAGCAATTTTGTTGGC+AGG - Chr4:50743404-50743423 None:intergenic 45.0%
! TCTTGGTTCCGATTGACTCA+CGG + Chr4:50742371-50742390 MsG0480020936.01.T01:intron 45.0%
! TTTGAGATTGCTGGGGCTAT+TGG + Chr4:50743161-50743180 MsG0480020936.01.T01:CDS 45.0%
!! AAGGGCTATGTCTGGTCTTA+CGG + Chr4:50742605-50742624 MsG0480020936.01.T01:CDS 45.0%
!! CGGATGATCTTAGAAGTGTC+TGG + Chr4:50742988-50743007 MsG0480020936.01.T01:CDS 45.0%
!! CTCAACTCGTAGTTTTGCAC+AGG + Chr4:50742692-50742711 MsG0480020936.01.T01:CDS 45.0%
!!! TGACTCACGGTGTCGATTTT+GGG + Chr4:50742384-50742403 MsG0480020936.01.T01:intron 45.0%
!!! TTGACTCACGGTGTCGATTT+TGG + Chr4:50742383-50742402 MsG0480020936.01.T01:intron 45.0%
AAGCAGAGAGTCGTGTCTTG+AGG - Chr4:50742346-50742365 None:intergenic 50.0%
AGATCTGGAGAAACGGTGAC+TGG - Chr4:50742292-50742311 None:intergenic 50.0%
ATGAACGTGGAAGTGACACG+TGG - Chr4:50741628-50741647 None:intergenic 50.0%
ATGCTTGTGCAAGTGTGCCT+CGG + Chr4:50743861-50743880 MsG0480020936.01.T01:CDS 50.0%
CAAGATCCCCCATCTTGGTA+TGG + Chr4:50743743-50743762 MsG0480020936.01.T01:CDS 50.0%
CGATGAACAGTAACCCGACA+AGG + Chr4:50742233-50742252 MsG0480020936.01.T01:intron 50.0%
CGGCGCAATTCATATGTCCT+TGG + Chr4:50742625-50742644 MsG0480020936.01.T01:CDS 50.0%
GGTGCTCAAGATGCTAGCTA+AGG + Chr4:50741147-50741166 MsG0480020936.01.T01:CDS 50.0%
GGTTTCAATTCAATGCGGGG+TGG + Chr4:50742184-50742203 MsG0480020936.01.T01:CDS 50.0%
GGTTTCGGGAGATCAGACAA+AGG - Chr4:50742741-50742760 None:intergenic 50.0%
GTGGACACCCAGAAACGAAA+AGG - Chr4:50742319-50742338 None:intergenic 50.0%
TCCTCGTCAGTATAAACCCG+AGG - Chr4:50743881-50743900 None:intergenic 50.0%
! AGCCTTGCGCATGCCTTTTA+GGG - Chr4:50743463-50743482 None:intergenic 50.0%
! CTACGAGTTGAGACAGGCTT+CGG - Chr4:50742684-50742703 None:intergenic 50.0%
! GCCAAGGAGTCGTGTCTTTT+TGG + Chr4:50741184-50741203 MsG0480020936.01.T01:CDS 50.0%
! TTTCGTTTCTGGGTGTCCAC+CGG + Chr4:50742319-50742338 MsG0480020936.01.T01:intron 50.0%
!! CATATGTCCTTGGCCTTGCT+TGG + Chr4:50742635-50742654 MsG0480020936.01.T01:CDS 50.0%
!!! AAGATGGTTTTGTGCTCGCG+AGG + Chr4:50741126-50741145 MsG0480020936.01.T01:CDS 50.0%
ACAGGCTTCGGAGTAGGCTT+CGG - Chr4:50742672-50742691 None:intergenic 55.0%
CGCGATAAGCGTAACACTCC+CGG - Chr4:50743038-50743057 None:intergenic 55.0%
GAGAGTCGTGTCTTGAGGAC+CGG - Chr4:50742341-50742360 None:intergenic 55.0%
GAGGGAAAGTCGCAAGGAGT+TGG + Chr4:50741095-50741114 MsG0480020936.01.T01:CDS 55.0%
GAGTGTTACGCTTATCGCGC+TGG + Chr4:50743039-50743058 MsG0480020936.01.T01:CDS 55.0%
GCCTCGGGTTTATACTGACG+AGG + Chr4:50743877-50743896 MsG0480020936.01.T01:CDS 55.0%
GGCGTATGTGAGACCAAGCA+AGG - Chr4:50742651-50742670 None:intergenic 55.0%
GTTGAGACAGGCTTCGGAGT+AGG - Chr4:50742678-50742697 None:intergenic 55.0%
TCAATTTGGAGGTCTGCCCC+TGG - Chr4:50744029-50744048 None:intergenic 55.0%
TGCTTGTGCAAGTGTGCCTC+GGG + Chr4:50743862-50743881 MsG0480020936.01.T01:CDS 55.0%
TGTGAGACCAAGCAAGGCCA+AGG - Chr4:50742645-50742664 None:intergenic 55.0%
! CAGCCTTGCGCATGCCTTTT+AGG - Chr4:50743464-50743483 None:intergenic 55.0%
! GTCCCTAAAAGGCATGCGCA+AGG + Chr4:50743458-50743477 MsG0480020936.01.T01:CDS 55.0%
ACTGGCAGAACCACCGTGTG+AGG - Chr4:50742274-50742293 None:intergenic 60.0%
AGTCGTGTCTTGAGGACCGG+TGG - Chr4:50742338-50742357 None:intergenic 60.0%
CGCTTTCGTTGGGGCAATGC+AGG + Chr4:50743598-50743617 MsG0480020936.01.T01:CDS 60.0%
GCGCCGTTCAAACCCTTGTC+GGG - Chr4:50742249-50742268 None:intergenic 60.0%
GGCGCCGTTCAAACCCTTGT+CGG - Chr4:50742250-50742269 None:intergenic 60.0%
GGCGCTTGGAACTTGAAGCC+GGG + Chr4:50743017-50743036 MsG0480020936.01.T01:CDS 60.0%
GGGCGCTTGGAACTTGAAGC+CGG + Chr4:50743016-50743035 MsG0480020936.01.T01:CDS 60.0%
TGCGCAAGGCTGTAGTGCTG+TGG + Chr4:50743472-50743491 MsG0480020936.01.T01:CDS 60.0%
TTGAACGGCGCCACCTCACA+CGG + Chr4:50742258-50742277 MsG0480020936.01.T01:intron 60.0%
! ACGCTTATCGCGCTGGTCTC+CGG + Chr4:50743046-50743065 MsG0480020936.01.T01:CDS 60.0%
!! GTGTCTGGTCAAAGGGCGCT+TGG + Chr4:50743003-50743022 MsG0480020936.01.T01:CDS 60.0%
GGCAGAACCACCGTGTGAGG+TGG - Chr4:50742271-50742290 None:intergenic 65.0%
AACGGCGCCACCTCACACGG+TGG + Chr4:50742261-50742280 MsG0480020936.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr4 gene 50741085 50744048 50741085 ID=MsG0480020936.01;Name=MsG0480020936.01
Chr4 mRNA 50741085 50744048 50741085 ID=MsG0480020936.01.T01;Parent=MsG0480020936.01;Name=MsG0480020936.01.T01;_AED=0.65;_eAED=0.74;_QI=0|0|0|1|1|1|3|0|579
Chr4 exon 50741085 50741280 50741085 ID=MsG0480020936.01.T01:exon:16671;Parent=MsG0480020936.01.T01
Chr4 exon 50742148 50742241 50742148 ID=MsG0480020936.01.T01:exon:16672;Parent=MsG0480020936.01.T01
Chr4 exon 50742599 50744048 50742599 ID=MsG0480020936.01.T01:exon:16673;Parent=MsG0480020936.01.T01
Chr4 CDS 50741085 50741280 50741085 ID=MsG0480020936.01.T01:cds;Parent=MsG0480020936.01.T01
Chr4 CDS 50742148 50742241 50742148 ID=MsG0480020936.01.T01:cds;Parent=MsG0480020936.01.T01
Chr4 CDS 50742599 50744048 50742599 ID=MsG0480020936.01.T01:cds;Parent=MsG0480020936.01.T01
Gene Sequence

>MsG0480020936.01.T01

ATGATTTCAAGAGGGAAAGTCGCAAGGAGTTGGTTATCTTCAAGATGGTTTTGTGCTCGCGAGGTGCTCAAGATGCTAGCTAAGGAGTTTACTTTGCTTGCCAAGGAGTCGTGTCTTTTTGGATGCTCACAAGAAATCTTTGCTGTGAAAAATGACCTTGCTCGCATTGAGATATTTGCTATGAAAAAGGAGTTATCATCAGATTCCAATTCTAACTTTGACTATAAATCTAGGTTTCAATTCAATGCGGGGTGGGAGATTGAAAACGTGCAGATGGACTCCGATGAACAGTTTCAAAGGGCTATGTCTGGTCTTACGGCGCAATTCATATGTCCTTGGCCTTGCTTGGTCTCACATACGCCGAAGCCTACTCCGAAGCCTGTCTCAACTCGTAGTTTTGCACAGGTTCTTCTCAACAAAGTGAACGTCCCTTTGTCTGATCTCCCGAAACCTTGTTTGAAAGGTAATTCCCTTTCAATCAAAATTTTGGAGGATGTTTACCAATCTCGTCTAGCTAATTGCAACAATTACCTCCATGGTAGATTAGTGTTGTCTAAAGGGGATAAGCCTTTATCATATAAAGACTTACATGCTAAACTGTCACAATTATGGAAACCTCTTGATCAATGGAAGATGATTCCTATGGGTAGAGGTTTTTTTGAATTTCGCTTTTCAAATGCGGATGATCTTAGAAGTGTCTGGTCAAAGGGCGCTTGGAACTTGAAGCCGGGAGTGTTACGCTTATCGCGCTGGTCTCCGGATTTTAATCTCTTTAAACAGACTCAAACACACAGTCAGGTATGGGTACGTTTTCACTATCTTCCTCTAGAATATTGGCAAGATAGAATCCTTTTTGAGATTGCTGGGGCTATTGGTACACCTATAAAAATTGATGAGAATACTAGAAACAATTCATTTGGTCATTATGCTCGTGTTCTAGTAGATATCAATTTTGCTGGATTTATTCCTGATACTCTGTGTGTTGAAAGAGATAATTTTGCTTTTGACATAGAGATTGAGTATGAACATCCTCCATACTTTTGTTTCACTTGTAATTCTATTGGCCATTCATCGGATCATTGTAAGAAAGATCCTGCCAACAAAATTGCTCGTGAAAAGGTGACCACTAAAGAAAATCTTGTTAAGAATGTCCCTAAAAGGCATGCGCAAGGCTGTAGTGCTGTGGTTGATGAAGATCCTATTATTCTTGACATAATGAGGTCTAAGGAAGTAACAACTAATGTGTTAGTGGGTGATGTTATAAACCTTGAGGAAGAACTATATTCTAGCGCTTTCGTTGGGGCAATGCAGGTTCAATCAACACCTGTTGAAATTATGCCTGAAATACAAGGTGATGACCAACAGAGCAACGATATTCCTGATATGTGCATAGTTGGTTCTTGGAGTGATGCTGTGACGGACCTAGATTATATTCAAGATCCCCCATCTTGGTATGGTTTATGTTCTTCCAATGTCATGGTTTCTAATGATGTTTTAAATCCTAACATCGCTCATGATTTGGAGATTTTGCGGCCATATTTGAAGGGCAATGATGCTTGTGCAAGTGTGCCTCGGGTTTATACTGACGAGGAAGAAAGAGAGGCAGCTATCAACTACTTGAAAAACCGTTCTATTGCTGAAGAAGAGCCTTTTATTGAGGTGTCTAAGACGAAGAAAAAGAACGTGCAGAAACGTTTTCAGGTTCATAACACTCACTCCAGGGGCAGACCTCCAAATTGA
Protein sequence

>MsG0480020936.01.T01

MISRGKVARSWLSSRWFCAREVLKMLAKEFTLLAKESCLFGCSQEIFAVKNDLARIEIFAMKKELSSDSNSNFDYKSRFQFNAGWEIENVQMDSDEQFQRAMSGLTAQFICPWPCLVSHTPKPTPKPVSTRSFAQVLLNKVNVPLSDLPKPCLKGNSLSIKILEDVYQSRLANCNNYLHGRLVLSKGDKPLSYKDLHAKLSQLWKPLDQWKMIPMGRGFFEFRFSNADDLRSVWSKGAWNLKPGVLRLSRWSPDFNLFKQTQTHSQVWVRFHYLPLEYWQDRILFEIAGAIGTPIKIDENTRNNSFGHYARVLVDINFAGFIPDTLCVERDNFAFDIEIEYEHPPYFCFTCNSIGHSSDHCKKDPANKIAREKVTTKENLVKNVPKRHAQGCSAVVDEDPIILDIMRSKEVTTNVLVGDVINLEEELYSSAFVGAMQVQSTPVEIMPEIQGDDQQSNDIPDMCIVGSWSDAVTDLDYIQDPPSWYGLCSSNVMVSNDVLNPNIAHDLEILRPYLKGNDACASVPRVYTDEEEREAAINYLKNRSIAEEEPFIEVSKTKKKNVQKRFQVHNTHSRGRPPN*