Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021442.01.T01 | KEH30519.1 | 66.12 | 366 | 121 | 2 | 2 | 364 | 575 | 940 | 4.04E-164 | 493 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021442.01.T01 | Q8W4J9 | 27.829 | 327 | 197 | 16 | 23 | 339 | 577 | 874 | 1.28E-13 | 75.9 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021442.01.T01 | A0A072UL87 | 66.120 | 366 | 121 | 2 | 2 | 364 | 575 | 940 | 1.93e-164 | 493 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0480021441.01 | MsG0480021442.01 | 0.859906 | 2.990528e-63 | 8.026669e-60 |
| MsG0480021442.01 | MsG0480021981.01 | 0.834046 | 3.759078e-56 | 4.408752e-53 |
| MsG0480021442.01 | MsG0480021996.01 | 0.834672 | 2.617655e-56 | 3.128028e-53 |
| MsG0480021442.01 | MsG0480022520.01 | 0.817310 | 3.523524e-52 | 2.556950e-49 |
| MsG0480021442.01 | MsG0880047142.01 | 0.807335 | 5.315019e-50 | 2.952510e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021442.01.T01 | MTR_4g073840 | 66.120 | 366 | 121 | 2 | 2 | 364 | 575 | 940 | 4.89e-168 | 493 |
| MsG0480021442.01.T01 | MTR_2g038510 | 28.125 | 352 | 182 | 19 | 12 | 339 | 590 | 894 | 2.88e-17 | 84.0 |
| MsG0480021442.01.T01 | MTR_5g021080 | 26.648 | 349 | 209 | 14 | 8 | 342 | 569 | 884 | 4.51e-16 | 80.5 |
| MsG0480021442.01.T01 | MTR_3g056585 | 25.212 | 353 | 177 | 14 | 17 | 335 | 572 | 871 | 5.85e-15 | 77.0 |
| MsG0480021442.01.T01 | MTR_3g020890 | 28.994 | 338 | 194 | 20 | 21 | 334 | 566 | 881 | 8.66e-13 | 70.5 |
| MsG0480021442.01.T01 | MTR_3g055930 | 27.299 | 348 | 196 | 16 | 6 | 334 | 590 | 899 | 1.50e-12 | 69.3 |
| MsG0480021442.01.T01 | MTR_3g012310 | 26.437 | 348 | 187 | 13 | 17 | 335 | 581 | 888 | 1.64e-12 | 69.3 |
| MsG0480021442.01.T01 | MTR_3g012240 | 26.593 | 361 | 213 | 17 | 17 | 358 | 627 | 954 | 1.20e-11 | 66.6 |
| MsG0480021442.01.T01 | MTR_3g055740 | 28.324 | 346 | 196 | 14 | 10 | 339 | 511 | 820 | 1.94e-11 | 65.9 |
| MsG0480021442.01.T01 | MTR_3g034430 | 28.035 | 346 | 198 | 20 | 24 | 342 | 578 | 899 | 3.43e-11 | 65.5 |
| MsG0480021442.01.T01 | MTR_1g090680 | 21.408 | 341 | 224 | 10 | 17 | 334 | 1138 | 1457 | 8.66e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021442.01.T01 | AT1G53350 | 26.934 | 349 | 193 | 18 | 16 | 341 | 565 | 874 | 3.94e-14 | 74.3 |
| MsG0480021442.01.T01 | AT5G48620 | 26.377 | 345 | 214 | 15 | 4 | 339 | 561 | 874 | 4.28e-14 | 74.3 |
| MsG0480021442.01.T01 | AT5G48620 | 26.377 | 345 | 214 | 15 | 4 | 339 | 561 | 874 | 4.28e-14 | 74.3 |
| MsG0480021442.01.T01 | AT5G48620 | 26.377 | 345 | 214 | 15 | 4 | 339 | 561 | 874 | 4.28e-14 | 74.3 |
| MsG0480021442.01.T01 | AT5G48620 | 26.377 | 345 | 214 | 15 | 4 | 339 | 561 | 874 | 4.28e-14 | 74.3 |
| MsG0480021442.01.T01 | AT5G48620 | 26.377 | 345 | 214 | 15 | 4 | 339 | 561 | 874 | 4.28e-14 | 74.3 |
| MsG0480021442.01.T01 | AT5G48620 | 26.377 | 345 | 214 | 15 | 4 | 339 | 561 | 874 | 4.28e-14 | 74.3 |
| MsG0480021442.01.T01 | AT5G35450 | 25.836 | 329 | 200 | 17 | 23 | 339 | 569 | 865 | 1.41e-11 | 66.6 |
| MsG0480021442.01.T01 | AT5G35450 | 25.836 | 329 | 200 | 17 | 23 | 339 | 569 | 865 | 1.41e-11 | 66.6 |
Find 80 sgRNAs with CRISPR-Local
Find 88 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCTTCACTGCTACAAAATT+TGG | 0.144470 | 4:+57920117 | MsG0480021442.01.T01:CDS |
| AATCCTAATCTTTCTAGTTT+AGG | 0.176629 | 4:-57919503 | None:intergenic |
| ATCCTAATCTTTCTAGTTTA+GGG | 0.177838 | 4:-57919502 | None:intergenic |
| TGCATACGTTGCAAGGTTTA+TGG | 0.185749 | 4:-57919723 | None:intergenic |
| AGCCTAGAAATATTAGAATT+TGG | 0.206054 | 4:+57919278 | MsG0480021442.01.T01:CDS |
| GTCCAAATTCTAATATTTCT+AGG | 0.217534 | 4:-57919280 | None:intergenic |
| TTGTAAGCTTAATAACATTT+TGG | 0.239710 | 4:-57919555 | None:intergenic |
| GATCTTAATTGTGTTGAAAA+TGG | 0.272094 | 4:+57919905 | MsG0480021442.01.T01:CDS |
| ATTCTAATATTTCTAGGCTT+TGG | 0.301965 | 4:-57919274 | None:intergenic |
| TATGATGAAAATTTGGAGTT+TGG | 0.341336 | 4:-57919834 | None:intergenic |
| GCTTAGCAAAGGCTTCAAAT+TGG | 0.347643 | 4:+57919127 | MsG0480021442.01.T01:CDS |
| CATTGGCTAATTTCCAGTTT+CGG | 0.353520 | 4:-57919970 | None:intergenic |
| CAAAGGCTTCAAATTGGTTC+GGG | 0.357844 | 4:+57919133 | MsG0480021442.01.T01:CDS |
| CAAGTATGCCTATCCGAAAC+TGG | 0.363265 | 4:+57919957 | MsG0480021442.01.T01:CDS |
| TTTCAAGCAATGAGTGGAAA+TGG | 0.365509 | 4:+57919105 | MsG0480021442.01.T01:CDS |
| TGGAGATTGCATATAGAATC+TGG | 0.367914 | 4:-57919254 | None:intergenic |
| TATCAAAGCTCAAACATCTA+AGG | 0.376228 | 4:+57919342 | MsG0480021442.01.T01:CDS |
| AATGTTAACTTGGTAATGTT+AGG | 0.387889 | 4:-57919758 | None:intergenic |
| GCAAAGGCTTCAAATTGGTT+CGG | 0.395132 | 4:+57919132 | MsG0480021442.01.T01:CDS |
| ATTACCAAGTTAACATTGTC+AGG | 0.404783 | 4:+57919764 | MsG0480021442.01.T01:CDS |
| TTCCCTAAACTAGAAAGATT+AGG | 0.405275 | 4:+57919500 | MsG0480021442.01.T01:CDS |
| TAAGGCATGTGTATACTTGC+GGG | 0.406452 | 4:+57919360 | MsG0480021442.01.T01:CDS |
| GAAGACACGATGAATGCTAT+TGG | 0.407581 | 4:+57919803 | MsG0480021442.01.T01:CDS |
| TATTAAGAATTGTGCTAAGT+TGG | 0.409896 | 4:+57920021 | MsG0480021442.01.T01:CDS |
| ATTGTTTATCTCAAACTTCA+AGG | 0.411572 | 4:+57919523 | MsG0480021442.01.T01:CDS |
| CGAGGAACACGTAGCATGAT+AGG | 0.412374 | 4:-57919383 | None:intergenic |
| GTTCTTTGATGTGCTCTGAC+GGG | 0.417795 | 4:+57919072 | None:intergenic |
| CGTTCTTTGATGTGCTCTGA+CGG | 0.418626 | 4:+57919071 | None:intergenic |
| CAAAATTTGGAAGTTAAGAA+TGG | 0.419515 | 4:+57920130 | MsG0480021442.01.T01:CDS |
| TCAAAGGATTCCTTCCAACT+TGG | 0.429509 | 4:+57919181 | MsG0480021442.01.T01:CDS |
| TCTTAATAGAGAGGCTTTGA+AGG | 0.435592 | 4:-57920006 | None:intergenic |
| CAAAGGATTCCTTCCAACTT+GGG | 0.440966 | 4:+57919182 | MsG0480021442.01.T01:CDS |
| CAGTGAAGCCATTGGATTTG+AGG | 0.442212 | 4:-57920104 | None:intergenic |
| ACAAGTGGTTTACTGATAGT+TGG | 0.448650 | 4:+57919864 | MsG0480021442.01.T01:CDS |
| AGTGAAGCCATTGGATTTGA+GGG | 0.463224 | 4:-57920103 | None:intergenic |
| AACACCTGACAATGTTAACT+TGG | 0.463790 | 4:-57919768 | None:intergenic |
| CGTTAAGAAAAGTCTATGTT+GGG | 0.475278 | 4:+57920077 | MsG0480021442.01.T01:CDS |
| GCGTTAAGAAAAGTCTATGT+TGG | 0.501334 | 4:+57920076 | MsG0480021442.01.T01:CDS |
| CTACGCTTCCATTGAGTCTA+CGG | 0.503941 | 4:-57920164 | None:intergenic |
| TTTGAGCTTTGATACTCCAC+AGG | 0.523240 | 4:-57919333 | None:intergenic |
| TGAACTCACCGTAGACTCAA+TGG | 0.527134 | 4:+57920156 | MsG0480021442.01.T01:CDS |
| GCTAATTTCCAGTTTCGGAT+AGG | 0.527540 | 4:-57919965 | None:intergenic |
| ACAACATATCTCATAGAGAA+AGG | 0.527619 | 4:+57919473 | MsG0480021442.01.T01:CDS |
| GTGGATAAAACTCCCCAAGT+TGG | 0.528199 | 4:-57919195 | None:intergenic |
| TTGCAGGAGGTAGTTGTCAA+AGG | 0.529515 | 4:+57919165 | MsG0480021442.01.T01:CDS |
| ACATGATTGCATACGTTGCA+AGG | 0.529910 | 4:-57919730 | None:intergenic |
| TTCTTTGATGTGCTCTGACG+GGG | 0.532692 | 4:+57919073 | None:intergenic |
| AATCAGATGGTGGTGTTATG+TGG | 0.534618 | 4:+57919411 | MsG0480021442.01.T01:CDS |
| CTAAGGCATGTGTATACTTG+CGG | 0.537596 | 4:+57919359 | MsG0480021442.01.T01:CDS |
| AAGGTGTGACATTGAACCAT+TGG | 0.543322 | 4:-57919987 | None:intergenic |
| GTCAAAGACCACAATTCACT+TGG | 0.544881 | 4:-57920052 | None:intergenic |
| ATCTGAAACACCACCAACTG+TGG | 0.545317 | 4:-57919932 | None:intergenic |
| GTTAACTTGGTAATGTTAGG+AGG | 0.546368 | 4:-57919755 | None:intergenic |
| TTGAACTTCCATCGCGAGTG+TGG | 0.550604 | 4:-57919629 | None:intergenic |
| AAATGGTTTCCCACAGTTGG+TGG | 0.553526 | 4:+57919922 | MsG0480021442.01.T01:CDS |
| TCTTCATTTCAAGCAATGAG+TGG | 0.556002 | 4:+57919099 | MsG0480021442.01.T01:CDS |
| TAGCACAATTCTTAATAGAG+AGG | 0.559108 | 4:-57920015 | None:intergenic |
| TGAAAATGGTTTCCCACAGT+TGG | 0.565620 | 4:+57919919 | MsG0480021442.01.T01:CDS |
| GGGGAGAGAAATTGAGTACA+TGG | 0.572387 | 4:-57919312 | None:intergenic |
| AGAGAAATTGAGTACATGGT+TGG | 0.583315 | 4:-57919308 | None:intergenic |
| GAAGTTCAATTGCAAGCATG+AGG | 0.587357 | 4:+57919643 | MsG0480021442.01.T01:CDS |
| TTCTAACATACGAGCATCTG+AGG | 0.589731 | 4:-57919226 | None:intergenic |
| AAGACCACAATTCACTTGGA+AGG | 0.590066 | 4:-57920048 | None:intergenic |
| AGCATCTGAGGTACCTCAAG+TGG | 0.590249 | 4:-57919214 | None:intergenic |
| AAAGGATTCCTTCCAACTTG+GGG | 0.590421 | 4:+57919183 | MsG0480021442.01.T01:CDS |
| ATAGCCTTCCAAGTGAATTG+TGG | 0.591330 | 4:+57920044 | MsG0480021442.01.T01:CDS |
| TCATCATAAAAGGAGACAAG+TGG | 0.601734 | 4:+57919849 | MsG0480021442.01.T01:CDS |
| TACTCAATTTCTCTCCCCTG+TGG | 0.602425 | 4:+57919317 | MsG0480021442.01.T01:CDS |
| CGTAGACTCAATGGAAGCGT+AGG | 0.604125 | 4:+57920165 | MsG0480021442.01.T01:CDS |
| ATAAAACTCCCCAAGTTGGA+AGG | 0.608842 | 4:-57919191 | None:intergenic |
| GTTCCTCGTTCTAAATCAGA+TGG | 0.609773 | 4:+57919398 | MsG0480021442.01.T01:CDS |
| CGAAACTGGAAATTAGCCAA+TGG | 0.617212 | 4:+57919971 | MsG0480021442.01.T01:CDS |
| GAGTGGAAATGGCTTAGCAA+AGG | 0.622160 | 4:+57919116 | MsG0480021442.01.T01:CDS |
| TGGGAGACCCTCAAATCCAA+TGG | 0.622731 | 4:+57920096 | MsG0480021442.01.T01:CDS |
| TTGAGCTTTGATACTCCACA+GGG | 0.624843 | 4:-57919332 | None:intergenic |
| TCTGAAACACCACCAACTGT+GGG | 0.625500 | 4:-57919931 | None:intergenic |
| CCTCGTTCTAAATCAGATGG+TGG | 0.639889 | 4:+57919401 | MsG0480021442.01.T01:CDS |
| CCACCATCTGATTTAGAACG+AGG | 0.651445 | 4:-57919401 | None:intergenic |
| AAGTTCAATTGCAAGCATGA+GGG | 0.655160 | 4:+57919644 | MsG0480021442.01.T01:CDS |
| TGAGCTTTGATACTCCACAG+GGG | 0.800190 | 4:-57919331 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTGTAAGCTTAATAACATTT+TGG | - | Chr4:57919558-57919577 | None:intergenic | 20.0% |
| ! | AGCCTAGAAATATTAGAATT+TGG | + | Chr4:57919278-57919297 | MsG0480021442.01.T01:CDS | 25.0% |
| ! | ATTGTTTATCTCAAACTTCA+AGG | + | Chr4:57919523-57919542 | MsG0480021442.01.T01:CDS | 25.0% |
| ! | CAAAATTTGGAAGTTAAGAA+TGG | + | Chr4:57920130-57920149 | MsG0480021442.01.T01:CDS | 25.0% |
| ! | GATCTTAATTGTGTTGAAAA+TGG | + | Chr4:57919905-57919924 | MsG0480021442.01.T01:CDS | 25.0% |
| ! | GTCCAAATTCTAATATTTCT+AGG | - | Chr4:57919283-57919302 | None:intergenic | 25.0% |
| ! | TATTAAGAATTGTGCTAAGT+TGG | + | Chr4:57920021-57920040 | MsG0480021442.01.T01:CDS | 25.0% |
| !! | AAGCTAAAAATAGTCTTTTC+AGG | + | Chr4:57919596-57919615 | MsG0480021442.01.T01:CDS | 25.0% |
| !! | AGCTAAAAATAGTCTTTTCA+GGG | + | Chr4:57919597-57919616 | MsG0480021442.01.T01:CDS | 25.0% |
| !! | CTCCAAATTTTCATCATAAA+AGG | + | Chr4:57919839-57919858 | MsG0480021442.01.T01:CDS | 25.0% |
| !! | CTCCTTTTATGATGAAAATT+TGG | - | Chr4:57919844-57919863 | None:intergenic | 25.0% |
| !! | TATGATGAAAATTTGGAGTT+TGG | - | Chr4:57919837-57919856 | None:intergenic | 25.0% |
| !!! | AATCCTAATCTTTCTAGTTT+AGG | - | Chr4:57919506-57919525 | None:intergenic | 25.0% |
| !!! | AATGTTAACTTGGTAATGTT+AGG | - | Chr4:57919761-57919780 | None:intergenic | 25.0% |
| !!! | ATCCTAATCTTTCTAGTTTA+GGG | - | Chr4:57919505-57919524 | None:intergenic | 25.0% |
| !!! | ATTCTAATATTTCTAGGCTT+TGG | - | Chr4:57919277-57919296 | None:intergenic | 25.0% |
| ACAACATATCTCATAGAGAA+AGG | + | Chr4:57919473-57919492 | MsG0480021442.01.T01:CDS | 30.0% | |
| ATTACCAAGTTAACATTGTC+AGG | + | Chr4:57919764-57919783 | MsG0480021442.01.T01:CDS | 30.0% | |
| CGTTAAGAAAAGTCTATGTT+GGG | + | Chr4:57920077-57920096 | MsG0480021442.01.T01:CDS | 30.0% | |
| TAGCACAATTCTTAATAGAG+AGG | - | Chr4:57920018-57920037 | None:intergenic | 30.0% | |
| TATCAAAGCTCAAACATCTA+AGG | + | Chr4:57919342-57919361 | MsG0480021442.01.T01:CDS | 30.0% | |
| TTCCCTAAACTAGAAAGATT+AGG | + | Chr4:57919500-57919519 | MsG0480021442.01.T01:CDS | 30.0% | |
| ! | GCTAAAAATAGTCTTTTCAG+GGG | + | Chr4:57919598-57919617 | MsG0480021442.01.T01:CDS | 30.0% |
| !!! | GTTTACTGATAGTTGGTTTT+CGG | + | Chr4:57919871-57919890 | MsG0480021442.01.T01:CDS | 30.0% |
| AACACCTGACAATGTTAACT+TGG | - | Chr4:57919771-57919790 | None:intergenic | 35.0% | |
| AAGTTCAATTGCAAGCATGA+GGG | + | Chr4:57919644-57919663 | MsG0480021442.01.T01:CDS | 35.0% | |
| ACAAGTGGTTTACTGATAGT+TGG | + | Chr4:57919864-57919883 | MsG0480021442.01.T01:CDS | 35.0% | |
| AGAGAAATTGAGTACATGGT+TGG | - | Chr4:57919311-57919330 | None:intergenic | 35.0% | |
| GCGTTAAGAAAAGTCTATGT+TGG | + | Chr4:57920076-57920095 | MsG0480021442.01.T01:CDS | 35.0% | |
| TCATCATAAAAGGAGACAAG+TGG | + | Chr4:57919849-57919868 | MsG0480021442.01.T01:CDS | 35.0% | |
| TCTTCATTTCAAGCAATGAG+TGG | + | Chr4:57919099-57919118 | MsG0480021442.01.T01:CDS | 35.0% | |
| TGGAGATTGCATATAGAATC+TGG | - | Chr4:57919257-57919276 | None:intergenic | 35.0% | |
| TTTCAAGCAATGAGTGGAAA+TGG | + | Chr4:57919105-57919124 | MsG0480021442.01.T01:CDS | 35.0% | |
| ! | CATTGGCTAATTTCCAGTTT+CGG | - | Chr4:57919973-57919992 | None:intergenic | 35.0% |
| ! | TCTTAATAGAGAGGCTTTGA+AGG | - | Chr4:57920009-57920028 | None:intergenic | 35.0% |
| !! | AAAAATAGTCTTTTCAGGGG+AGG | + | Chr4:57919601-57919620 | MsG0480021442.01.T01:CDS | 35.0% |
| !! | GTTAACTTGGTAATGTTAGG+AGG | - | Chr4:57919758-57919777 | None:intergenic | 35.0% |
| AAAGGATTCCTTCCAACTTG+GGG | + | Chr4:57919183-57919202 | MsG0480021442.01.T01:CDS | 40.0% | |
| AAGACCACAATTCACTTGGA+AGG | - | Chr4:57920051-57920070 | None:intergenic | 40.0% | |
| AAGGTGTGACATTGAACCAT+TGG | - | Chr4:57919990-57920009 | None:intergenic | 40.0% | |
| ACATGATTGCATACGTTGCA+AGG | - | Chr4:57919733-57919752 | None:intergenic | 40.0% | |
| AGTGAAGCCATTGGATTTGA+GGG | - | Chr4:57920106-57920125 | None:intergenic | 40.0% | |
| ATAGCCTTCCAAGTGAATTG+TGG | + | Chr4:57920044-57920063 | MsG0480021442.01.T01:CDS | 40.0% | |
| CAAAGGATTCCTTCCAACTT+GGG | + | Chr4:57919182-57919201 | MsG0480021442.01.T01:CDS | 40.0% | |
| CGAAACTGGAAATTAGCCAA+TGG | + | Chr4:57919971-57919990 | MsG0480021442.01.T01:CDS | 40.0% | |
| CTAAGGCATGTGTATACTTG+CGG | + | Chr4:57919359-57919378 | MsG0480021442.01.T01:CDS | 40.0% | |
| GAAGACACGATGAATGCTAT+TGG | + | Chr4:57919803-57919822 | MsG0480021442.01.T01:CDS | 40.0% | |
| GAAGTTCAATTGCAAGCATG+AGG | + | Chr4:57919643-57919662 | MsG0480021442.01.T01:CDS | 40.0% | |
| GCAAAGGCTTCAAATTGGTT+CGG | + | Chr4:57919132-57919151 | MsG0480021442.01.T01:CDS | 40.0% | |
| GCTAATTTCCAGTTTCGGAT+AGG | - | Chr4:57919968-57919987 | None:intergenic | 40.0% | |
| GCTTAGCAAAGGCTTCAAAT+TGG | + | Chr4:57919127-57919146 | MsG0480021442.01.T01:CDS | 40.0% | |
| GGCTTCACTGCTACAAAATT+TGG | + | Chr4:57920117-57920136 | MsG0480021442.01.T01:CDS | 40.0% | |
| GTCAAAGACCACAATTCACT+TGG | - | Chr4:57920055-57920074 | None:intergenic | 40.0% | |
| TAAGGCATGTGTATACTTGC+GGG | + | Chr4:57919360-57919379 | MsG0480021442.01.T01:CDS | 40.0% | |
| TCAAAGGATTCCTTCCAACT+TGG | + | Chr4:57919181-57919200 | MsG0480021442.01.T01:CDS | 40.0% | |
| TGAAAATGGTTTCCCACAGT+TGG | + | Chr4:57919919-57919938 | MsG0480021442.01.T01:CDS | 40.0% | |
| TGCATACGTTGCAAGGTTTA+TGG | - | Chr4:57919726-57919745 | None:intergenic | 40.0% | |
| TTCTAACATACGAGCATCTG+AGG | - | Chr4:57919229-57919248 | None:intergenic | 40.0% | |
| ! | ATAAAACTCCCCAAGTTGGA+AGG | - | Chr4:57919194-57919213 | None:intergenic | 40.0% |
| ! | CAAAGGCTTCAAATTGGTTC+GGG | + | Chr4:57919133-57919152 | MsG0480021442.01.T01:CDS | 40.0% |
| ! | GTTCCTCGTTCTAAATCAGA+TGG | + | Chr4:57919398-57919417 | MsG0480021442.01.T01:CDS | 40.0% |
| ! | TTGAGCTTTGATACTCCACA+GGG | - | Chr4:57919335-57919354 | None:intergenic | 40.0% |
| ! | TTTGAGCTTTGATACTCCAC+AGG | - | Chr4:57919336-57919355 | None:intergenic | 40.0% |
| ! | TTTTGTAGCAGTGAAGCCAT+TGG | - | Chr4:57920115-57920134 | None:intergenic | 40.0% |
| !! | AATCAGATGGTGGTGTTATG+TGG | + | Chr4:57919411-57919430 | MsG0480021442.01.T01:CDS | 40.0% |
| AAATGGTTTCCCACAGTTGG+TGG | + | Chr4:57919922-57919941 | MsG0480021442.01.T01:CDS | 45.0% | |
| CAAGTATGCCTATCCGAAAC+TGG | + | Chr4:57919957-57919976 | MsG0480021442.01.T01:CDS | 45.0% | |
| CAGTGAAGCCATTGGATTTG+AGG | - | Chr4:57920107-57920126 | None:intergenic | 45.0% | |
| CTACGCTTCCATTGAGTCTA+CGG | - | Chr4:57920167-57920186 | None:intergenic | 45.0% | |
| GAGTGGAAATGGCTTAGCAA+AGG | + | Chr4:57919116-57919135 | MsG0480021442.01.T01:CDS | 45.0% | |
| GGGGAGAGAAATTGAGTACA+TGG | - | Chr4:57919315-57919334 | None:intergenic | 45.0% | |
| GTGGATAAAACTCCCCAAGT+TGG | - | Chr4:57919198-57919217 | None:intergenic | 45.0% | |
| TACTCAATTTCTCTCCCCTG+TGG | + | Chr4:57919317-57919336 | MsG0480021442.01.T01:CDS | 45.0% | |
| TGAACTCACCGTAGACTCAA+TGG | + | Chr4:57920156-57920175 | MsG0480021442.01.T01:CDS | 45.0% | |
| TTGCAGGAGGTAGTTGTCAA+AGG | + | Chr4:57919165-57919184 | MsG0480021442.01.T01:CDS | 45.0% | |
| ! | ATCTGAAACACCACCAACTG+TGG | - | Chr4:57919935-57919954 | None:intergenic | 45.0% |
| ! | CCACCATCTGATTTAGAACG+AGG | - | Chr4:57919404-57919423 | None:intergenic | 45.0% |
| ! | CCTCGTTCTAAATCAGATGG+TGG | + | Chr4:57919401-57919420 | MsG0480021442.01.T01:CDS | 45.0% |
| ! | TCTGAAACACCACCAACTGT+GGG | - | Chr4:57919934-57919953 | None:intergenic | 45.0% |
| ! | TGAGCTTTGATACTCCACAG+GGG | - | Chr4:57919334-57919353 | None:intergenic | 45.0% |
| !! | TGGGGAGTTTTATCCACTTG+AGG | + | Chr4:57919201-57919220 | MsG0480021442.01.T01:CDS | 45.0% |
| CGAGGAACACGTAGCATGAT+AGG | - | Chr4:57919386-57919405 | None:intergenic | 50.0% | |
| TGGGAGACCCTCAAATCCAA+TGG | + | Chr4:57920096-57920115 | MsG0480021442.01.T01:CDS | 50.0% | |
| TTGAACTTCCATCGCGAGTG+TGG | - | Chr4:57919632-57919651 | None:intergenic | 50.0% | |
| ! | AGCATCTGAGGTACCTCAAG+TGG | - | Chr4:57919217-57919236 | None:intergenic | 50.0% |
| ! | AGGATTTTCCACACTCGCGA+TGG | + | Chr4:57919621-57919640 | MsG0480021442.01.T01:CDS | 50.0% |
| !!! | GTTCGGGTGTTAGCTTTTGC+AGG | + | Chr4:57919149-57919168 | MsG0480021442.01.T01:CDS | 50.0% |
| !!! | CGGGTGTTAGCTTTTGCAGG+AGG | + | Chr4:57919152-57919171 | MsG0480021442.01.T01:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 57919080 | 57920186 | 57919080 | ID=MsG0480021442.01;Name=MsG0480021442.01 |
| Chr4 | mRNA | 57919080 | 57920186 | 57919080 | ID=MsG0480021442.01.T01;Parent=MsG0480021442.01;Name=MsG0480021442.01.T01;_AED=0.49;_eAED=0.49;_QI=0|-1|0|1|-1|1|1|0|368 |
| Chr4 | exon | 57919080 | 57920186 | 57919080 | ID=MsG0480021442.01.T01:exon:17213;Parent=MsG0480021442.01.T01 |
| Chr4 | CDS | 57919080 | 57920186 | 57919080 | ID=MsG0480021442.01.T01:cds;Parent=MsG0480021442.01.T01 |
| Gene Sequence |
| Protein sequence |
