AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480022064.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480022064.01.T01 MTR_4g081650 89.809 157 14 2 1 156 1 156 2.18e-88 275
MsG0480022064.01.T01 MTR_4g081665 92.949 156 11 0 1 156 1 156 7.55e-86 268
MsG0480022064.01.T01 MTR_4g081750 87.898 157 17 2 1 156 1 156 1.40e-83 267
MsG0480022064.01.T01 MTR_8g465990 51.829 164 70 5 4 164 12 169 8.44e-40 142
MsG0480022064.01.T01 MTR_8g465990 51.829 164 70 5 4 164 12 169 1.63e-39 142
MsG0480022064.01.T01 MTR_8g465990 51.829 164 70 5 4 164 12 169 1.63e-39 142
MsG0480022064.01.T01 MTR_4g081685 49.123 171 73 6 4 164 3 169 1.21e-38 139
MsG0480022064.01.T01 MTR_8g465980 45.860 157 84 1 1 156 1 157 1.29e-38 139
MsG0480022064.01.T01 MTR_4g081640 46.497 157 79 2 3 156 5 159 2.15e-38 139
MsG0480022064.01.T01 MTR_4g081655 51.128 133 64 1 24 156 59 190 4.11e-38 138
MsG0480022064.01.T01 MTR_4g081655 51.128 133 64 1 24 156 59 190 4.60e-38 137
MsG0480022064.01.T01 MTR_4g081655 51.128 133 64 1 24 156 24 155 5.91e-38 137
MsG0480022064.01.T01 MTR_4g081730 52.353 170 67 8 1 164 7 168 8.61e-38 137
MsG0480022064.01.T01 MTR_4g081675 49.425 174 72 8 1 164 1 168 3.93e-37 135
MsG0480022064.01.T01 MTR_5g067290 46.207 145 74 3 24 165 30 173 2.16e-35 127
MsG0480022064.01.T01 MTR_5g067250 44.156 154 83 2 6 156 11 164 5.73e-35 129
MsG0480022064.01.T01 MTR_2g011170 42.949 156 83 3 4 156 6 158 5.91e-35 128
MsG0480022064.01.T01 MTR_2g011170 42.949 156 83 3 4 156 6 158 1.08e-34 128
MsG0480022064.01.T01 MTR_2g011150 48.227 141 70 2 19 156 23 163 1.45e-34 128
MsG0480022064.01.T01 MTR_6g012810 44.025 159 81 4 6 156 106 264 1.98e-34 127
MsG0480022064.01.T01 MTR_6g012810 44.025 159 81 4 6 156 106 264 2.04e-34 127
MsG0480022064.01.T01 MTR_5g055070 43.713 167 85 5 3 164 1 163 8.51e-33 123
MsG0480022064.01.T01 MTR_5g055070 43.713 167 85 5 3 164 1 163 8.61e-33 122
MsG0480022064.01.T01 MTR_5g055070 43.713 167 85 5 3 164 1 163 9.30e-33 122
MsG0480022064.01.T01 MTR_3g051420 37.349 166 99 3 1 162 8 172 2.46e-32 121
MsG0480022064.01.T01 MTR_0090s0020 44.937 158 82 4 1 156 1 155 3.24e-32 121
MsG0480022064.01.T01 MTR_0090s0020 44.937 158 82 4 1 156 1 155 3.35e-32 121
MsG0480022064.01.T01 MTR_0090s0020 44.937 158 82 4 1 156 1 155 3.71e-32 121
MsG0480022064.01.T01 MTR_0090s0020 44.937 158 82 4 1 156 1 155 3.82e-32 121
MsG0480022064.01.T01 MTR_3g019420 46.094 128 65 3 38 162 40 166 7.31e-32 120
MsG0480022064.01.T01 MTR_3g020230 41.007 139 80 2 25 162 30 167 8.08e-32 120
MsG0480022064.01.T01 MTR_3g020320 43.972 141 75 3 25 162 30 169 1.88e-31 119
MsG0480022064.01.T01 MTR_3g019580 41.007 139 80 2 25 162 43 180 2.82e-31 118
MsG0480022064.01.T01 MTR_3g019580 41.007 139 80 2 25 162 43 180 2.96e-31 118
MsG0480022064.01.T01 MTR_3g019580 41.007 139 80 2 25 162 43 180 3.24e-31 118
MsG0480022064.01.T01 MTR_3g019580 41.007 139 80 2 25 162 40 177 3.27e-31 118
MsG0480022064.01.T01 MTR_3g019530 42.446 139 77 3 25 162 30 166 6.82e-31 117
MsG0480022064.01.T01 MTR_8g465580 45.283 159 71 4 7 156 7 158 7.89e-31 117
MsG0480022064.01.T01 MTR_3g019530 42.446 139 77 3 25 162 30 166 8.20e-31 117
MsG0480022064.01.T01 MTR_3g019530 42.446 139 77 3 25 162 30 166 8.39e-31 117
MsG0480022064.01.T01 MTR_3g019530 42.446 139 77 3 25 162 30 166 8.51e-31 117
MsG0480022064.01.T01 MTR_3g019530 42.446 139 77 3 25 162 30 166 8.62e-31 117
MsG0480022064.01.T01 MTR_8g465410 43.636 165 77 4 1 156 1 158 9.57e-31 117
MsG0480022064.01.T01 MTR_3g020280 39.744 156 88 3 7 156 9 164 1.25e-30 116
MsG0480022064.01.T01 MTR_8g465510 44.444 162 82 4 1 156 1 160 1.39e-30 116
MsG0480022064.01.T01 MTR_2g081500 37.107 159 97 3 6 162 7 164 2.38e-30 115
MsG0480022064.01.T01 MTR_2g011160 42.857 154 81 5 7 156 11 161 1.42e-29 114
MsG0480022064.01.T01 MTR_2g011160 42.857 154 81 5 7 156 11 161 1.42e-29 113
MsG0480022064.01.T01 MTR_3g020330 39.568 139 82 2 25 162 30 167 2.39e-29 113
MsG0480022064.01.T01 MTR_3g019390 38.272 162 96 3 4 162 6 166 2.44e-29 113
MsG0480022064.01.T01 MTR_3g019390 38.272 162 96 3 4 162 6 166 2.52e-29 113
MsG0480022064.01.T01 MTR_3g007590 44.512 164 77 5 7 156 8 171 2.66e-29 111
MsG0480022064.01.T01 MTR_3g019500 42.361 144 76 4 25 162 30 172 1.08e-28 111
MsG0480022064.01.T01 MTR_3g019500 42.361 144 76 4 25 162 30 172 1.13e-28 111
MsG0480022064.01.T01 MTR_3g019500 42.361 144 76 4 25 162 30 172 1.24e-28 111
MsG0480022064.01.T01 MTR_3g019490 42.361 144 76 4 25 162 30 172 1.55e-28 110
MsG0480022064.01.T01 MTR_3g007510 42.771 166 79 5 1 153 5 167 1.66e-28 110
MsG0480022064.01.T01 MTR_8g465470 45.098 153 76 5 7 156 42 189 1.67e-28 110
MsG0480022064.01.T01 MTR_3g007510 42.771 166 79 5 1 153 5 167 1.73e-28 110
MsG0480022064.01.T01 MTR_3g007510 42.771 166 79 5 1 153 5 167 1.73e-28 110
MsG0480022064.01.T01 MTR_4g091820 42.675 157 80 4 4 153 23 176 2.08e-28 110
MsG0480022064.01.T01 MTR_4g091800 42.675 157 80 4 4 153 23 176 2.81e-28 110
MsG0480022064.01.T01 MTR_8g465570 45.098 153 76 5 7 156 11 158 3.26e-28 109
MsG0480022064.01.T01 MTR_2g081470 37.013 154 95 2 5 156 3 156 3.91e-28 109
MsG0480022064.01.T01 MTR_2g081520 40.602 133 78 1 25 156 24 156 3.94e-28 109
MsG0480022064.01.T01 MTR_2g081520 40.602 133 78 1 25 156 24 156 4.04e-28 109
MsG0480022064.01.T01 MTR_2g081520 40.602 133 78 1 25 156 24 156 4.19e-28 109
MsG0480022064.01.T01 MTR_2g081520 40.602 133 78 1 25 156 24 156 4.22e-28 109
MsG0480022064.01.T01 MTR_2g081520 40.602 133 78 1 25 156 24 156 4.66e-28 109
MsG0480022064.01.T01 MTR_2g081520 40.602 133 78 1 25 156 24 156 4.80e-28 109
MsG0480022064.01.T01 MTR_3g007650 41.718 163 82 4 4 153 7 169 7.64e-27 105
MsG0480022064.01.T01 MTR_4g091670 40.000 165 88 5 2 156 3 166 2.27e-26 104
MsG0480022064.01.T01 MTR_4g091670 40.000 165 88 5 2 156 3 166 2.47e-26 104
MsG0480022064.01.T01 MTR_4g091670 40.000 165 88 5 2 156 3 166 2.59e-26 104
MsG0480022064.01.T01 MTR_4g091840 40.000 160 86 4 4 156 23 179 6.09e-25 100
MsG0480022064.01.T01 MTR_3g007630 44.681 141 64 5 26 153 28 167 1.06e-24 99.8
MsG0480022064.01.T01 MTR_4g091690 39.623 159 87 4 13 164 35 191 1.98e-24 99.0
MsG0480022064.01.T01 MTR_2g089440 40.000 170 85 8 9 164 9 175 2.35e-24 99.0
MsG0480022064.01.T01 MTR_4g091680 46.094 128 61 4 33 153 57 183 3.82e-24 98.2
MsG0480022064.01.T01 MTR_2g089360 40.136 147 81 5 24 164 27 172 4.57e-24 98.2
MsG0480022064.01.T01 MTR_4g091780 36.905 168 92 5 7 164 13 176 8.80e-24 97.1
MsG0480022064.01.T01 MTR_7g056663 40.000 160 87 6 7 164 12 164 1.02e-23 97.1
MsG0480022064.01.T01 MTR_7g056617 39.623 159 89 5 7 164 18 170 4.05e-23 95.1
MsG0480022064.01.T01 MTR_7g056680 39.877 163 88 5 3 164 11 164 7.64e-23 94.4
MsG0480022064.01.T01 MTR_7g056680 39.877 163 88 5 3 164 11 164 8.18e-23 94.4
MsG0480022064.01.T01 MTR_7g056680 39.877 163 88 5 3 164 11 164 8.41e-23 94.4
MsG0480022064.01.T01 MTR_7g056680 39.877 163 88 5 3 164 11 164 8.50e-23 94.4
MsG0480022064.01.T01 MTR_7g056647 37.576 165 96 5 1 164 12 170 1.51e-22 93.6
MsG0480022064.01.T01 MTR_4g098890 41.558 154 81 6 13 164 596 742 2.01e-22 93.6
MsG0480022064.01.T01 MTR_4g091760 38.194 144 80 3 18 153 18 160 3.27e-22 92.8
MsG0480022064.01.T01 MTR_0280s0040 42.254 142 75 5 25 160 28 168 3.48e-22 92.8
MsG0480022064.01.T01 MTR_7g056667 39.394 165 90 5 1 164 7 162 7.05e-22 91.7
MsG0480022064.01.T01 MTR_2g011180 40.741 135 71 4 27 153 30 163 1.30e-21 90.9
MsG0480022064.01.T01 MTR_2g011180 40.741 135 71 4 27 153 30 163 1.55e-21 90.9
MsG0480022064.01.T01 MTR_4g091570 42.963 135 67 5 27 156 258 387 3.09e-21 90.1
MsG0480022064.01.T01 MTR_2g089290 37.879 132 71 4 39 162 42 170 3.34e-21 89.7
MsG0480022064.01.T01 MTR_7g056420 36.879 141 84 3 15 153 356 493 6.65e-21 89.0
MsG0480022064.01.T01 MTR_7g056430 36.879 141 84 3 15 153 356 493 7.65e-21 89.0
MsG0480022064.01.T01 MTR_2g011340 37.349 166 95 6 4 164 10 171 8.67e-21 88.6
MsG0480022064.01.T01 MTR_2g011280 35.928 167 97 5 4 164 10 172 1.08e-20 88.2
MsG0480022064.01.T01 MTR_8g030500 34.058 138 81 5 26 156 14 148 1.51e-19 85.1
MsG0480022064.01.T01 MTR_3g031600 40.441 136 72 5 24 153 20 152 1.53e-19 85.1
MsG0480022064.01.T01 MTR_3g031610 40.580 138 69 6 24 153 20 152 3.23e-19 84.0
MsG0480022064.01.T01 MTR_3g031640 36.025 161 82 7 1 153 5 152 4.49e-19 83.6
MsG0480022064.01.T01 MTR_7g056510 40.000 140 79 4 26 164 29 164 4.70e-19 83.6
MsG0480022064.01.T01 MTR_7g056510 40.000 140 79 4 26 164 19 154 5.01e-19 83.6
MsG0480022064.01.T01 MTR_7g056510 40.000 140 79 4 26 164 29 164 5.15e-19 83.6
MsG0480022064.01.T01 MTR_7g056510 40.000 140 79 4 26 164 29 164 5.18e-19 83.6
MsG0480022064.01.T01 MTR_7g056510 40.000 140 79 4 26 164 29 164 5.33e-19 83.6
MsG0480022064.01.T01 MTR_2g011210 38.562 153 84 5 20 166 29 177 9.05e-19 82.8
MsG0480022064.01.T01 MTR_8g465160 36.076 158 91 4 8 156 10 166 1.20e-18 82.4
MsG0480022064.01.T01 MTR_2g011270 36.691 139 81 4 19 153 4 139 2.63e-18 81.6
MsG0480022064.01.T01 MTR_3g031490 40.833 120 64 4 39 153 35 152 3.32e-18 81.3
MsG0480022064.01.T01 MTR_8g465150 34.375 160 93 4 8 156 10 168 4.03e-18 80.9
MsG0480022064.01.T01 MTR_3g031480 34.615 156 88 6 4 153 9 156 9.17e-18 80.1
MsG0480022064.01.T01 MTR_7g056640 36.970 165 93 6 1 164 38 192 1.37e-17 79.3
MsG0480022064.01.T01 MTR_4g091850 39.860 143 75 4 18 153 37 175 1.43e-17 79.3
MsG0480022064.01.T01 MTR_2g011190 34.940 166 96 6 7 166 13 172 1.54e-17 79.3
MsG0480022064.01.T01 MTR_3g031580 39.706 136 73 5 24 153 23 155 1.58e-17 79.3
MsG0480022064.01.T01 MTR_3g031470 36.025 161 82 7 3 153 9 158 2.18e-17 79.0
MsG0480022064.01.T01 MTR_8g013560 36.025 161 94 7 3 162 12 164 4.64e-17 77.8
MsG0480022064.01.T01 MTR_7g056537 37.879 132 77 4 34 164 133 260 5.60e-17 77.0
MsG0480022064.01.T01 MTR_2g011240 36.552 145 81 4 19 157 4 143 5.95e-17 77.8
MsG0480022064.01.T01 MTR_8g013610 33.750 160 97 6 4 162 14 165 7.51e-17 77.4
MsG0480022064.01.T01 MTR_8g013580 33.333 162 99 5 3 163 19 172 9.47e-17 77.0
MsG0480022064.01.T01 MTR_7g056623 39.062 128 73 4 38 164 21 144 1.85e-16 76.3
MsG0480022064.01.T01 MTR_4g091860 35.507 138 78 5 26 153 23 159 3.35e-16 75.5
MsG0480022064.01.T01 MTR_7g056450 36.943 157 91 6 1 153 13 165 7.85e-16 74.3
MsG0480022064.01.T01 MTR_7g056450 38.312 154 81 7 7 153 9 155 9.17e-16 74.3
MsG0480022064.01.T01 MTR_7g056650 35.526 152 93 4 15 164 663 811 9.64e-16 74.3
MsG0480022064.01.T01 MTR_1g052880 34.066 182 84 9 8 160 4 178 3.39e-15 72.4
MsG0480022064.01.T01 MTR_4g094858 36.076 158 87 9 3 153 9 159 3.54e-15 72.4
MsG0480022064.01.T01 MTR_7g058830 35.714 168 85 10 1 153 1 160 4.05e-15 72.4
MsG0480022064.01.T01 MTR_4g040480 31.395 172 108 5 1 166 1 168 4.44e-15 72.4
MsG0480022064.01.T01 MTR_8g013600 35.802 162 93 7 3 162 12 164 4.82e-15 72.0
MsG0480022064.01.T01 MTR_8g013620 36.496 137 81 3 18 151 24 157 1.06e-14 71.2
MsG0480022064.01.T01 MTR_7g053050 35.625 160 88 8 4 153 5 159 1.14e-14 70.9
MsG0480022064.01.T01 MTR_8g013620 37.956 137 79 4 18 151 24 157 1.19e-14 70.9
MsG0480022064.01.T01 MTR_8g013620 36.496 137 81 3 18 151 24 157 1.20e-14 70.9
MsG0480022064.01.T01 MTR_0148s0080 35.507 138 69 5 39 156 44 181 1.23e-14 70.9
MsG0480022064.01.T01 MTR_2g011230 32.278 158 97 5 7 157 4 158 1.30e-14 70.9
MsG0480022064.01.T01 MTR_8g013620 37.956 137 79 4 18 151 24 157 1.31e-14 70.9
MsG0480022064.01.T01 MTR_8g442310 36.364 132 76 6 38 164 14 142 6.61e-13 65.9
MsG0480022064.01.T01 MTR_8g442270 39.535 86 48 2 74 156 85 169 1.99e-12 64.7
MsG0480022064.01.T01 MTR_8g442340 32.298 161 99 7 3 156 14 171 2.43e-12 64.3
MsG0480022064.01.T01 MTR_8g011430 32.283 127 82 3 39 165 50 172 4.13e-12 63.5
MsG0480022064.01.T01 MTR_2g076590 32.121 165 94 9 2 153 10 169 5.89e-12 63.2
MsG0480022064.01.T01 MTR_4g091730 32.867 143 69 4 18 152 18 141 6.63e-12 63.2
MsG0480022064.01.T01 MTR_2g076490 32.121 165 94 9 2 153 10 169 1.45e-11 62.0
MsG0480022064.01.T01 MTR_7g058860 39.344 122 63 6 39 153 42 159 2.04e-11 61.6
MsG0480022064.01.T01 MTR_3g102400 32.231 121 77 3 38 155 40 158 2.55e-11 61.2
MsG0480022064.01.T01 MTR_7g056670 44.578 83 41 2 18 100 2 79 3.93e-11 56.6
MsG0480022064.01.T01 MTR_3g107070 32.231 121 74 5 35 153 30 144 5.16e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480022064.01.T01 AT4G27290 42.581 155 82 3 8 156 9 162 2.22e-30 116
MsG0480022064.01.T01 AT4G27290 42.581 155 82 3 8 156 9 162 2.91e-30 115
MsG0480022064.01.T01 AT1G11300 44.604 139 72 4 30 165 33 169 7.52e-28 108
MsG0480022064.01.T01 AT1G11300 44.604 139 72 4 30 165 33 169 8.00e-28 108
MsG0480022064.01.T01 AT1G61370 40.789 152 83 3 3 153 8 153 2.60e-27 107
MsG0480022064.01.T01 AT1G11280 45.139 144 72 3 11 153 19 156 1.67e-26 105
MsG0480022064.01.T01 AT1G61610 36.000 150 94 2 8 156 14 162 1.69e-26 105
MsG0480022064.01.T01 AT1G11280 45.139 144 72 3 11 153 19 156 1.73e-26 105
MsG0480022064.01.T01 AT1G11280 45.139 144 72 3 11 153 29 166 1.78e-26 105
MsG0480022064.01.T01 AT1G11280 45.139 144 72 3 11 153 29 166 1.81e-26 105
MsG0480022064.01.T01 AT1G61610 36.000 150 94 2 8 156 14 162 1.82e-26 105
MsG0480022064.01.T01 AT1G11280 45.139 144 72 3 11 153 19 156 1.91e-26 104
MsG0480022064.01.T01 AT1G61390 40.260 154 86 3 1 153 22 170 2.95e-26 104
MsG0480022064.01.T01 AT1G11303 37.725 167 96 5 1 164 7 168 5.78e-26 103
MsG0480022064.01.T01 AT1G61360 39.610 154 86 3 1 153 1 148 1.14e-25 102
MsG0480022064.01.T01 AT3G12000 40.141 142 78 3 19 153 29 170 5.26e-25 100
MsG0480022064.01.T01 AT1G61440 42.759 145 76 3 10 153 7 145 7.81e-25 100
MsG0480022064.01.T01 AT1G61440 42.759 145 76 3 10 153 7 145 8.00e-25 100
MsG0480022064.01.T01 AT1G61440 42.759 145 76 3 10 153 7 145 9.02e-25 100
MsG0480022064.01.T01 AT1G61430 42.763 152 79 4 3 153 8 152 1.08e-24 99.8
MsG0480022064.01.T01 AT1G61430 42.763 152 79 4 3 153 8 152 1.08e-24 99.8
MsG0480022064.01.T01 AT1G61430 42.763 152 79 4 3 153 8 152 1.13e-24 99.8
MsG0480022064.01.T01 AT1G61430 42.763 152 79 4 3 153 8 152 1.32e-24 99.8
MsG0480022064.01.T01 AT1G61430 42.763 152 79 4 3 153 8 152 1.44e-24 99.4
MsG0480022064.01.T01 AT1G61430 42.763 152 79 4 3 153 8 152 1.44e-24 99.4
MsG0480022064.01.T01 AT1G61430 42.763 152 79 4 3 153 8 152 1.45e-24 99.4
MsG0480022064.01.T01 AT1G11410 41.844 141 74 4 18 153 18 155 1.88e-24 99.4
MsG0480022064.01.T01 AT1G11410 41.844 141 74 4 18 153 25 162 2.24e-24 99.0
MsG0480022064.01.T01 AT1G11340 39.098 133 75 3 26 153 21 152 2.41e-24 99.0
MsG0480022064.01.T01 AT1G11340 39.098 133 75 3 26 153 89 220 3.20e-24 98.6
MsG0480022064.01.T01 AT1G61430 45.385 130 69 2 25 153 33 161 3.36e-24 98.2
MsG0480022064.01.T01 AT1G61430 46.094 128 67 2 27 153 3 129 3.72e-24 98.2
MsG0480022064.01.T01 AT1G11340 39.098 133 75 3 26 153 89 220 4.16e-24 98.2
MsG0480022064.01.T01 AT1G61430 46.094 128 67 2 27 153 3 129 4.56e-24 98.2
MsG0480022064.01.T01 AT1G61430 46.094 128 67 2 27 153 3 129 4.56e-24 98.2
MsG0480022064.01.T01 AT1G61430 46.094 128 67 2 27 153 3 129 4.56e-24 98.2
MsG0480022064.01.T01 AT1G61430 46.094 128 67 2 27 153 3 129 4.75e-24 97.8
MsG0480022064.01.T01 AT1G61480 38.514 148 89 2 7 153 6 152 6.25e-24 97.8
MsG0480022064.01.T01 AT4G21390 37.255 153 85 5 8 153 13 161 1.07e-23 97.1
MsG0480022064.01.T01 AT4G21390 37.255 153 85 5 8 153 13 161 1.28e-23 96.7
MsG0480022064.01.T01 AT1G61400 39.865 148 82 3 7 153 21 162 3.17e-23 95.5
MsG0480022064.01.T01 AT4G21380 40.876 137 77 3 21 153 28 164 3.31e-23 95.5
MsG0480022064.01.T01 AT4G21380 40.876 137 77 3 21 153 28 164 3.82e-23 95.5
MsG0480022064.01.T01 AT1G61400 39.865 148 82 3 7 153 21 162 3.84e-23 95.5
MsG0480022064.01.T01 AT1G61380 41.538 130 74 2 25 153 21 149 4.22e-23 95.5
MsG0480022064.01.T01 AT1G65800 37.778 135 80 3 26 156 31 165 2.20e-22 93.2
MsG0480022064.01.T01 AT1G65800 37.778 135 80 3 26 156 31 165 2.42e-22 93.2
MsG0480022064.01.T01 AT1G11410 40.625 128 70 3 31 153 5 131 2.50e-22 93.2
MsG0480022064.01.T01 AT1G61460 37.500 152 90 3 3 153 6 153 3.99e-22 92.4
MsG0480022064.01.T01 AT1G65790 37.500 136 81 3 21 154 26 159 4.98e-22 92.4
MsG0480022064.01.T01 AT1G65790 37.500 136 81 3 21 154 26 159 5.61e-22 92.0
MsG0480022064.01.T01 AT1G65790 37.500 136 81 3 21 154 26 159 5.61e-22 92.0
MsG0480022064.01.T01 AT1G61550 38.462 143 86 2 12 153 6 147 4.87e-21 89.4
MsG0480022064.01.T01 AT1G11350 40.876 137 71 3 24 153 22 155 1.73e-20 87.8
MsG0480022064.01.T01 AT1G61420 38.462 130 78 2 25 153 24 152 1.76e-20 87.8
MsG0480022064.01.T01 AT1G61420 38.462 130 78 2 25 153 24 152 1.76e-20 87.8
MsG0480022064.01.T01 AT1G61420 38.462 130 78 2 25 153 24 152 1.76e-20 87.8
MsG0480022064.01.T01 AT1G67520 34.416 154 92 3 20 164 20 173 7.00e-20 86.3
MsG0480022064.01.T01 AT1G67520 34.416 154 92 3 20 164 20 173 7.29e-20 85.9
MsG0480022064.01.T01 AT1G67520 34.416 154 92 3 20 164 20 173 7.34e-20 85.9
MsG0480022064.01.T01 AT1G67520 34.416 154 92 3 20 164 27 180 7.64e-20 85.9
MsG0480022064.01.T01 AT1G67520 34.416 154 92 3 20 164 20 173 9.02e-20 85.9
MsG0480022064.01.T01 AT4G03230 35.256 156 90 6 19 165 21 174 9.39e-20 85.9
MsG0480022064.01.T01 AT3G16030 34.211 152 95 2 8 156 10 159 1.10e-19 85.5
MsG0480022064.01.T01 AT1G11330 35.659 129 70 4 34 153 42 166 2.98e-19 84.3
MsG0480022064.01.T01 AT1G11330 35.659 129 70 4 34 153 42 166 3.01e-19 84.3
MsG0480022064.01.T01 AT1G11330 35.659 129 70 4 34 153 42 166 3.10e-19 84.3
MsG0480022064.01.T01 AT4G03230 33.721 172 101 7 3 165 7 174 3.81e-19 84.0
MsG0480022064.01.T01 AT4G03230 33.721 172 101 7 3 165 7 174 3.81e-19 84.0
MsG0480022064.01.T01 AT1G61500 39.597 149 83 3 6 153 16 158 1.15e-18 82.4
MsG0480022064.01.T01 AT1G61500 39.597 149 83 3 6 153 11 153 1.20e-18 82.4
MsG0480022064.01.T01 AT1G61490 35.135 148 94 2 7 153 6 152 1.76e-18 82.0
MsG0480022064.01.T01 AT1G61490 35.135 148 94 2 7 153 6 152 1.76e-18 82.0
MsG0480022064.01.T01 AT1G61490 35.135 148 94 2 7 153 6 152 1.76e-18 82.0
MsG0480022064.01.T01 AT1G61490 35.135 148 94 2 7 153 6 152 1.76e-18 82.0
MsG0480022064.01.T01 AT1G61490 35.135 148 94 2 7 153 6 152 1.86e-18 82.0
MsG0480022064.01.T01 AT1G61490 35.135 148 94 2 7 153 6 152 1.86e-18 82.0
MsG0480022064.01.T01 AT1G61500 43.750 128 70 2 27 153 9 135 6.39e-18 80.5
MsG0480022064.01.T01 AT2G19130 36.628 172 95 9 1 164 2 167 3.03e-17 78.6
MsG0480022064.01.T01 AT3G16030 31.902 163 95 3 8 156 10 170 4.80e-17 77.8
MsG0480022064.01.T01 AT3G16030 31.902 163 95 3 8 156 10 170 5.28e-17 77.8
MsG0480022064.01.T01 AT3G16030 31.902 163 95 3 8 156 10 170 5.28e-17 77.8
MsG0480022064.01.T01 AT3G16030 31.902 163 95 3 8 156 10 170 5.28e-17 77.8
MsG0480022064.01.T01 AT3G16030 31.902 163 95 3 8 156 10 170 5.64e-17 77.8
MsG0480022064.01.T01 AT3G16030 31.902 163 95 3 8 156 10 170 7.27e-17 77.4
MsG0480022064.01.T01 AT4G27300 35.664 143 79 5 23 156 24 162 2.20e-16 75.9
MsG0480022064.01.T01 AT4G00340 39.552 134 69 7 29 156 22 149 1.55e-15 73.6
MsG0480022064.01.T01 AT4G00340 39.552 134 69 7 29 156 22 149 1.64e-15 73.6
MsG0480022064.01.T01 AT5G18470 33.333 180 100 6 3 164 7 184 4.38e-15 72.0
MsG0480022064.01.T01 AT4G11900 32.500 200 93 8 3 166 9 202 5.55e-15 72.0
MsG0480022064.01.T01 AT4G11900 32.500 200 93 8 3 166 9 202 5.55e-15 72.0
MsG0480022064.01.T01 AT4G11900 32.500 200 93 8 3 166 9 202 5.63e-15 72.0
MsG0480022064.01.T01 AT4G11900 32.500 200 93 8 3 166 9 202 5.94e-15 72.0
MsG0480022064.01.T01 AT4G11900 32.500 200 93 8 3 166 9 202 6.24e-15 71.6
MsG0480022064.01.T01 AT4G11900 32.500 200 93 8 3 166 9 202 6.24e-15 71.6
MsG0480022064.01.T01 AT4G11900 32.500 200 93 8 3 166 9 202 6.34e-15 71.6
MsG0480022064.01.T01 AT4G11900 32.500 200 93 8 3 166 9 202 6.34e-15 71.6

Find 32 sgRNAs with CRISPR-Local

Find 34 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCAAACTCAAAATGTTGTT+TGG 0.280602 4:+67633940 MsG0480022064.01.T01:CDS
ACTAAACAGTTCTGGAAGTT+TGG 0.318985 4:+67634010 MsG0480022064.01.T01:CDS
ATTCCGAGGTAGCGTTTGTT+TGG 0.334931 4:-67633903 None:intergenic
CTCATAACAACAACATCGTT+TGG 0.354278 4:+67634039 MsG0480022064.01.T01:CDS
CCAGGCTCAAAGAGTCCTTT+TGG 0.390325 4:-67633861 None:intergenic
GTCATCACTGGCTATGGAAT+TGG 0.409783 4:-67633784 None:intergenic
GTATCCAGGAGTTGTGCTAT+TGG 0.416387 4:-67634092 None:intergenic
ATAGCACAACTCCTGGATAC+TGG 0.423558 4:+67634095 MsG0480022064.01.T01:CDS
CCAAAAGGACTCTTTGAGCC+TGG 0.424956 4:+67633861 MsG0480022064.01.T01:CDS
TCAAACTCAAAATGTTGTTT+GGG 0.432840 4:+67633941 MsG0480022064.01.T01:CDS
CGATGTTGTTGTTATGAGTA+AGG 0.433956 4:-67634034 None:intergenic
ATAGCAGAAGAGTCATTGAT+TGG 0.443047 4:-67633981 None:intergenic
GGGACCATTGTTTCACCAAA+AGG 0.471896 4:+67633846 MsG0480022064.01.T01:CDS
TGACAAGATTGCCAGTATCC+AGG 0.473181 4:-67634106 None:intergenic
TATTGGTTGCTGTGCGTTTG+TGG 0.480438 4:-67634075 None:intergenic
CCGTCTAATACATTGTTGTC+AGG 0.484399 4:+67634179 MsG0480022064.01.T01:CDS
GTCAAAGCTTTGCCACAGAT+AGG 0.493302 4:-67634153 None:intergenic
GCAACCAATAGCACAACTCC+TGG 0.513844 4:+67634088 MsG0480022064.01.T01:CDS
AATGTTGTTTGGGTTGCAAA+TGG 0.519876 4:+67633951 MsG0480022064.01.T01:CDS
TGATGTGTCATCACTGGCTA+TGG 0.544217 4:-67633790 None:intergenic
CAATCTCAATCCATCAGTGA+TGG 0.557149 4:+67633822 MsG0480022064.01.T01:CDS
AATGGTCCCTCCATCACTGA+TGG 0.559144 4:-67633832 None:intergenic
TCTCAATCCATCAGTGATGG+AGG 0.588092 4:+67633825 MsG0480022064.01.T01:CDS
AATGGATGATGTGTCATCAC+TGG 0.590413 4:-67633796 None:intergenic
CCTGACAACAATGTATTAGA+CGG 0.604316 4:-67634179 None:intergenic
AATCCAAACAAACGCTACCT+CGG 0.606078 4:+67633900 MsG0480022064.01.T01:CDS
CTCAATCCATCAGTGATGGA+GGG 0.612610 4:+67633826 MsG0480022064.01.T01:CDS
CATTCTTGAATCGAATTCCG+AGG 0.616695 4:-67633917 None:intergenic
GTTGTTTGGGTTGCAAATGG+TGG 0.619003 4:+67633954 MsG0480022064.01.T01:CDS
GATGGATTGAGATTGAGTAA+TGG 0.636423 4:-67633814 None:intergenic
TTTGTAATACTGAAGAAACC+AGG 0.683091 4:-67633879 None:intergenic
GTGTCAGTGAAACCTATCTG+TGG 0.687235 4:+67634141 MsG0480022064.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! TTCAAACTCAAAATGTTGTT+TGG + Chr4:67633940-67633959 MsG0480022064.01.T01:CDS 25.0%
!! TCAAACTCAAAATGTTGTTT+GGG + Chr4:67633941-67633960 MsG0480022064.01.T01:CDS 25.0%
!!! ATTTTGAAACTAAACAGTTC+TGG + Chr4:67634002-67634021 MsG0480022064.01.T01:CDS 25.0%
TTTGTAATACTGAAGAAACC+AGG - Chr4:67633882-67633901 None:intergenic 30.0%
ATAGCAGAAGAGTCATTGAT+TGG - Chr4:67633984-67634003 None:intergenic 35.0%
CCTGACAACAATGTATTAGA+CGG - Chr4:67634182-67634201 None:intergenic 35.0%
CTCATAACAACAACATCGTT+TGG + Chr4:67634039-67634058 MsG0480022064.01.T01:CDS 35.0%
! CGATGTTGTTGTTATGAGTA+AGG - Chr4:67634037-67634056 None:intergenic 35.0%
!! AATGTTGTTTGGGTTGCAAA+TGG + Chr4:67633951-67633970 MsG0480022064.01.T01:CDS 35.0%
!! ACTAAACAGTTCTGGAAGTT+TGG + Chr4:67634010-67634029 MsG0480022064.01.T01:CDS 35.0%
!! GATGGATTGAGATTGAGTAA+TGG - Chr4:67633817-67633836 None:intergenic 35.0%
AATCCAAACAAACGCTACCT+CGG + Chr4:67633900-67633919 MsG0480022064.01.T01:CDS 40.0%
AATGGATGATGTGTCATCAC+TGG - Chr4:67633799-67633818 None:intergenic 40.0%
CAATCTCAATCCATCAGTGA+TGG + Chr4:67633822-67633841 MsG0480022064.01.T01:CDS 40.0%
CATTCTTGAATCGAATTCCG+AGG - Chr4:67633920-67633939 None:intergenic 40.0%
CCGTCTAATACATTGTTGTC+AGG + Chr4:67634179-67634198 MsG0480022064.01.T01:CDS 40.0%
! GAGTCCTTTTGGTGAAACAA+TGG - Chr4:67633853-67633872 None:intergenic 40.0%
ATAGCACAACTCCTGGATAC+TGG + Chr4:67634095-67634114 MsG0480022064.01.T01:CDS 45.0%
ATTCCGAGGTAGCGTTTGTT+TGG - Chr4:67633906-67633925 None:intergenic 45.0%
GGGACCATTGTTTCACCAAA+AGG + Chr4:67633846-67633865 MsG0480022064.01.T01:CDS 45.0%
GTATCCAGGAGTTGTGCTAT+TGG - Chr4:67634095-67634114 None:intergenic 45.0%
GTCAAAGCTTTGCCACAGAT+AGG - Chr4:67634156-67634175 None:intergenic 45.0%
GTGTCAGTGAAACCTATCTG+TGG + Chr4:67634141-67634160 MsG0480022064.01.T01:CDS 45.0%
TCTCAATCCATCAGTGATGG+AGG + Chr4:67633825-67633844 MsG0480022064.01.T01:CDS 45.0%
TGACAAGATTGCCAGTATCC+AGG - Chr4:67634109-67634128 None:intergenic 45.0%
! CTCAATCCATCAGTGATGGA+GGG + Chr4:67633826-67633845 MsG0480022064.01.T01:CDS 45.0%
! GTCATCACTGGCTATGGAAT+TGG - Chr4:67633787-67633806 None:intergenic 45.0%
! TATTGGTTGCTGTGCGTTTG+TGG - Chr4:67634078-67634097 None:intergenic 45.0%
! TGATGTGTCATCACTGGCTA+TGG - Chr4:67633793-67633812 None:intergenic 45.0%
!! GTTGTTTGGGTTGCAAATGG+TGG + Chr4:67633954-67633973 MsG0480022064.01.T01:CDS 45.0%
AATGGTCCCTCCATCACTGA+TGG - Chr4:67633835-67633854 None:intergenic 50.0%
CCAAAAGGACTCTTTGAGCC+TGG + Chr4:67633861-67633880 MsG0480022064.01.T01:CDS 50.0%
GCAACCAATAGCACAACTCC+TGG + Chr4:67634088-67634107 MsG0480022064.01.T01:CDS 50.0%
! CCAGGCTCAAAGAGTCCTTT+TGG - Chr4:67633864-67633883 None:intergenic 50.0%
Chromosome Type Strat End Strand Name
Chr4 gene 67633738 67634238 67633738 ID=MsG0480022064.01;Name=MsG0480022064.01
Chr4 mRNA 67633738 67634238 67633738 ID=MsG0480022064.01.T01;Parent=MsG0480022064.01;Name=MsG0480022064.01.T01;_AED=0.48;_eAED=0.48;_QI=0|-1|0|1|-1|1|1|0|166
Chr4 exon 67633738 67634238 67633738 ID=MsG0480022064.01.T01:exon:21112;Parent=MsG0480022064.01.T01
Chr4 CDS 67633738 67634238 67633738 ID=MsG0480022064.01.T01:cds;Parent=MsG0480022064.01.T01
Gene Sequence

>MsG0480022064.01.T01

ATGAGTTTCATTACTTATATTCTATTTGTTCTCTCTCTTATTGTCTCCAATTCCATAGCCAGTGATGACACATCATCCATTACTCAATCTCAATCCATCAGTGATGGAGGGACCATTGTTTCACCAAAAGGACTCTTTGAGCCTGGTTTCTTCAGTATTACAAATCCAAACAAACGCTACCTCGGAATTCGATTCAAGAATGTTCAAACTCAAAATGTTGTTTGGGTTGCAAATGGTGGCAAGCCAATCAATGACTCTTCTGCTATTTTGAAACTAAACAGTTCTGGAAGTTTGGTCCTTACTCATAACAACAACATCGTTTGGTTCACAAATTCTTCCACAAACGCACAGCAACCAATAGCACAACTCCTGGATACTGGCAATCTTGTCATAAAAGAAGATAGTGTCAGTGAAACCTATCTGTGGCAAAGCTTTGACTATCCGTCTAATACATTGTTGTCAGGTATTGTTAAGATTGATGCAAATTCTAGACTATTCTAG
Protein sequence

>MsG0480022064.01.T01

MSFITYILFVLSLIVSNSIASDDTSSITQSQSISDGGTIVSPKGLFEPGFFSITNPNKRYLGIRFKNVQTQNVVWVANGGKPINDSSAILKLNSSGSLVLTHNNNIVWFTNSSTNAQQPIAQLLDTGNLVIKEDSVSETYLWQSFDYPSNTLLSGIVKIDANSRLF*