Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480023129.01.T01 | XP_003629867.1 | 97.788 | 678 | 15 | 0 | 1 | 678 | 1 | 678 | 0 | 1355 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480023129.01.T01 | Q9ZP55 | 59.438 | 641 | 256 | 3 | 35 | 673 | 29 | 667 | 0 | 793 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480023129.01.T01 | G7L7C0 | 97.788 | 678 | 15 | 0 | 1 | 678 | 1 | 678 | 0.0 | 1355 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0380017369.01 | MsG0480023129.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480023129.01.T01 | MTR_8g087750 | 97.788 | 678 | 15 | 0 | 1 | 678 | 1 | 678 | 0.0 | 1355 |
| MsG0480023129.01.T01 | MTR_8g087770 | 81.967 | 671 | 112 | 5 | 11 | 677 | 6 | 671 | 0.0 | 1108 |
| MsG0480023129.01.T01 | MTR_8g087763 | 71.556 | 225 | 64 | 0 | 376 | 600 | 4 | 228 | 2.57e-117 | 355 |
| MsG0480023129.01.T01 | MTR_4g093750 | 37.805 | 328 | 184 | 7 | 65 | 378 | 31 | 352 | 1.14e-46 | 176 |
| MsG0480023129.01.T01 | MTR_4g093750 | 40.550 | 291 | 153 | 7 | 69 | 345 | 35 | 319 | 2.36e-46 | 176 |
| MsG0480023129.01.T01 | MTR_2g009690 | 38.488 | 291 | 167 | 6 | 65 | 345 | 40 | 328 | 4.80e-43 | 167 |
| MsG0480023129.01.T01 | MTR_8g105580 | 36.054 | 294 | 165 | 8 | 71 | 349 | 35 | 320 | 2.07e-34 | 139 |
| MsG0480023129.01.T01 | MTR_8g105580 | 36.054 | 294 | 165 | 8 | 71 | 349 | 35 | 320 | 2.18e-34 | 139 |
| MsG0480023129.01.T01 | MTR_5g009150 | 35.836 | 293 | 168 | 7 | 71 | 349 | 35 | 321 | 4.98e-34 | 138 |
| MsG0480023129.01.T01 | MTR_1g032550 | 32.865 | 356 | 197 | 12 | 71 | 392 | 35 | 382 | 8.91e-34 | 137 |
| MsG0480023129.01.T01 | MTR_7g451010 | 34.810 | 316 | 182 | 9 | 71 | 371 | 40 | 346 | 1.67e-33 | 136 |
| MsG0480023129.01.T01 | MTR_8g009510 | 35.127 | 316 | 181 | 9 | 71 | 371 | 40 | 346 | 6.86e-33 | 135 |
| MsG0480023129.01.T01 | MTR_8g027675 | 42.211 | 199 | 104 | 5 | 71 | 266 | 34 | 224 | 1.29e-31 | 130 |
| MsG0480023129.01.T01 | MTR_4g098920 | 32.402 | 358 | 196 | 12 | 71 | 392 | 34 | 381 | 1.44e-31 | 130 |
| MsG0480023129.01.T01 | MTR_8g099550 | 33.441 | 311 | 193 | 7 | 71 | 371 | 34 | 340 | 1.68e-31 | 130 |
| MsG0480023129.01.T01 | MTR_4g085860 | 72.368 | 76 | 20 | 1 | 208 | 282 | 2 | 77 | 2.57e-29 | 111 |
| MsG0480023129.01.T01 | MTR_6g045107 | 71.053 | 76 | 21 | 1 | 208 | 282 | 2 | 77 | 2.57e-27 | 105 |
| MsG0480023129.01.T01 | MTR_8g009510 | 31.707 | 246 | 148 | 6 | 138 | 371 | 2 | 239 | 2.55e-18 | 89.4 |
| MsG0480023129.01.T01 | MTR_8g463270 | 29.583 | 240 | 146 | 9 | 56 | 281 | 27 | 257 | 5.13e-15 | 79.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480023129.01.T01 | AT1G60500 | 59.438 | 641 | 256 | 3 | 35 | 673 | 29 | 667 | 0.0 | 793 |
| MsG0480023129.01.T01 | AT1G60530 | 71.181 | 288 | 77 | 1 | 22 | 309 | 19 | 300 | 3.71e-141 | 414 |
| MsG0480023129.01.T01 | AT4G33650 | 35.604 | 323 | 187 | 8 | 38 | 345 | 30 | 346 | 1.14e-42 | 166 |
| MsG0480023129.01.T01 | AT4G33650 | 35.604 | 323 | 187 | 8 | 38 | 345 | 30 | 346 | 1.17e-42 | 166 |
| MsG0480023129.01.T01 | AT2G14120 | 34.954 | 329 | 192 | 8 | 36 | 348 | 12 | 334 | 1.76e-41 | 162 |
| MsG0480023129.01.T01 | AT2G14120 | 34.954 | 329 | 192 | 8 | 36 | 348 | 12 | 334 | 1.87e-41 | 161 |
| MsG0480023129.01.T01 | AT2G14120 | 34.954 | 329 | 192 | 8 | 36 | 348 | 12 | 334 | 2.09e-41 | 162 |
| MsG0480023129.01.T01 | AT2G14120 | 34.954 | 329 | 192 | 8 | 36 | 348 | 12 | 334 | 2.34e-41 | 161 |
| MsG0480023129.01.T01 | AT1G14830 | 34.405 | 311 | 190 | 7 | 71 | 371 | 35 | 341 | 8.18e-36 | 143 |
| MsG0480023129.01.T01 | AT2G44590 | 32.915 | 319 | 197 | 8 | 71 | 378 | 35 | 347 | 1.35e-34 | 140 |
| MsG0480023129.01.T01 | AT3G60190 | 34.084 | 311 | 191 | 7 | 71 | 371 | 40 | 346 | 8.37e-34 | 137 |
| MsG0480023129.01.T01 | AT5G42080 | 34.727 | 311 | 189 | 7 | 71 | 371 | 34 | 340 | 8.61e-33 | 132 |
| MsG0480023129.01.T01 | AT5G42080 | 34.727 | 311 | 189 | 7 | 71 | 371 | 34 | 340 | 1.95e-32 | 133 |
| MsG0480023129.01.T01 | AT5G42080 | 29.526 | 464 | 299 | 12 | 71 | 520 | 34 | 483 | 2.07e-32 | 133 |
| MsG0480023129.01.T01 | AT5G42080 | 29.526 | 464 | 299 | 12 | 71 | 520 | 34 | 483 | 2.07e-32 | 133 |
| MsG0480023129.01.T01 | AT3G61760 | 34.177 | 316 | 184 | 9 | 71 | 371 | 34 | 340 | 2.93e-31 | 128 |
| MsG0480023129.01.T01 | AT3G61760 | 34.177 | 316 | 184 | 9 | 71 | 371 | 34 | 340 | 3.39e-31 | 129 |
| MsG0480023129.01.T01 | AT3G61760 | 34.177 | 316 | 184 | 9 | 71 | 371 | 34 | 340 | 3.61e-31 | 129 |
| MsG0480023129.01.T01 | AT2G44590 | 30.094 | 319 | 189 | 9 | 71 | 378 | 35 | 330 | 3.81e-25 | 110 |
| MsG0480023129.01.T01 | AT2G44590 | 30.094 | 319 | 189 | 9 | 71 | 378 | 35 | 330 | 4.65e-25 | 110 |
| MsG0480023129.01.T01 | AT1G53140 | 25.368 | 272 | 183 | 6 | 9 | 271 | 9 | 269 | 5.74e-15 | 79.3 |
Find 112 sgRNAs with CRISPR-Local
Find 126 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAGAGTCTCCGTCTATTTC+TGG | 0.150723 | 4:-81185602 | MsG0480023129.01.T01:CDS |
| AGTCTCACTCACTTCTTTCT+AGG | 0.252212 | 4:-81186642 | MsG0480023129.01.T01:CDS |
| ATTCTGAAGGCGCATAATTA+AGG | 0.255203 | 4:+81187203 | None:intergenic |
| GCAGTTCTTGGCATGAAATT+TGG | 0.255839 | 4:+81186211 | None:intergenic |
| TTACTACTTGTGAGTCTATC+AGG | 0.258224 | 4:-81186858 | MsG0480023129.01.T01:CDS |
| TGGAAGCTGAATTCCTTCTT+TGG | 0.309988 | 4:+81187329 | None:intergenic |
| TTCAAATTATTATCAGCTTC+AGG | 0.310159 | 4:-81186071 | MsG0480023129.01.T01:CDS |
| TTCTCAAGGGCGTCGAGAAC+TGG | 0.318424 | 4:+81187372 | None:intergenic |
| AGTATTTGCTCGAGTATAAT+AGG | 0.323700 | 4:-81185934 | MsG0480023129.01.T01:CDS |
| TTAACTTTGTTGATAATGTT+TGG | 0.326087 | 4:-81186138 | MsG0480023129.01.T01:CDS |
| CTTCCAACAATTGTTGTTGT+TGG | 0.331397 | 4:-81187312 | MsG0480023129.01.T01:CDS |
| GGAGACTGTTGCAAGAATTA+TGG | 0.333112 | 4:-81185531 | MsG0480023129.01.T01:CDS |
| GTTGTTGGAGATCAATCTTC+AGG | 0.340523 | 4:-81187297 | MsG0480023129.01.T01:CDS |
| TCACAAATGGTTGATAAAAC+TGG | 0.343252 | 4:-81186832 | MsG0480023129.01.T01:CDS |
| TTTAGCTCAGAAGCTTGTTC+AGG | 0.351831 | 4:-81186590 | MsG0480023129.01.T01:CDS |
| TTGAATTCTAACAAGAGTTC+TGG | 0.352154 | 4:+81187165 | None:intergenic |
| TTCAAGATAATACTTTCTTC+AGG | 0.356152 | 4:+81186904 | None:intergenic |
| CTTACCATGGTTGATCTTCC+AGG | 0.356170 | 4:-81187006 | MsG0480023129.01.T01:CDS |
| TCAGATAAAAGATATTATTA+TGG | 0.384953 | 4:-81186938 | MsG0480023129.01.T01:CDS |
| AGGCTAGGATGATTGCTTAC+TGG | 0.386618 | 4:-81185766 | MsG0480023129.01.T01:CDS |
| AAGTTCAGTCCAACATGTTA+TGG | 0.389392 | 4:-81186002 | MsG0480023129.01.T01:CDS |
| ACATTATCAACAAAGTTAAC+TGG | 0.400837 | 4:+81186142 | None:intergenic |
| ACCTTCTCCAACAATCCTTC+AGG | 0.403379 | 4:+81186769 | None:intergenic |
| CAAAGTTCTTAGAGAAAGTA+AGG | 0.404659 | 4:-81185552 | MsG0480023129.01.T01:CDS |
| CATAGGTCTCATCTCCAATT+CGG | 0.409654 | 4:+81186698 | None:intergenic |
| TTAATCTTCTTGATGATCTC+TGG | 0.410614 | 4:+81186538 | None:intergenic |
| TCTCCAACAACAACAATTGT+TGG | 0.419207 | 4:+81187309 | None:intergenic |
| AATACTGCAGAGAAAAGTTA+AGG | 0.423316 | 4:-81186179 | MsG0480023129.01.T01:CDS |
| GTCTGTGTGCGAAACCGAAT+TGG | 0.426739 | 4:-81186712 | MsG0480023129.01.T01:CDS |
| TCGACGCCCTTGAGAATCTA+AGG | 0.430085 | 4:-81187365 | MsG0480023129.01.T01:CDS |
| ATCTGATCATAGATATTGTC+AGG | 0.431759 | 4:+81186955 | None:intergenic |
| CCAACACATGTGAAGCTTGA+AGG | 0.436407 | 4:-81185857 | MsG0480023129.01.T01:CDS |
| CAATGCATGTGCTTGTCCTC+AGG | 0.447247 | 4:+81186364 | None:intergenic |
| CAGGTGTCCACTCGCAGAGC+AGG | 0.452565 | 4:-81186052 | MsG0480023129.01.T01:CDS |
| TAAATCTCCTGAAGGATTGT+TGG | 0.453191 | 4:-81186776 | MsG0480023129.01.T01:CDS |
| GACCTATGAAGATGCTAGAT+TGG | 0.455034 | 4:-81186683 | MsG0480023129.01.T01:CDS |
| ATCACCCGTGTACCTGTTCA+TGG | 0.456607 | 4:-81186982 | MsG0480023129.01.T01:CDS |
| GAACTCTTGTTAGAATTCAA+TGG | 0.458145 | 4:-81187162 | MsG0480023129.01.T01:CDS |
| ATTTGGTAGACCAATCCATT+TGG | 0.458705 | 4:+81186228 | None:intergenic |
| ACAAGCTTCTGAGCTAAAAC+AGG | 0.462376 | 4:+81186595 | None:intergenic |
| TATGGAAGAGATTAAGGTGT+TGG | 0.462977 | 4:-81186257 | MsG0480023129.01.T01:CDS |
| AGGAGTGTTGGAAATCCCTT+TGG | 0.463701 | 4:+81187065 | None:intergenic |
| TGATACCAGCTAAAGATTCA+AGG | 0.464998 | 4:+81187262 | None:intergenic |
| TTCTGAAGGCGCATAATTAA+GGG | 0.465234 | 4:+81187204 | None:intergenic |
| AGTGTCCTTGAATCTTTAGC+TGG | 0.467085 | 4:-81187267 | MsG0480023129.01.T01:CDS |
| AAGAGTTCTGGCTTTGAAAG+TGG | 0.480074 | 4:+81187177 | None:intergenic |
| CCTTCAAGCTTCACATGTGT+TGG | 0.480389 | 4:+81185857 | None:intergenic |
| CGTCTCAACATTGCCAAAGA+AGG | 0.485759 | 4:-81187342 | MsG0480023129.01.T01:CDS |
| CTCTAAGAACTTTGACACTT+CGG | 0.488083 | 4:+81185561 | None:intergenic |
| CTCCGTCTATTTCTGGAAAG+AGG | 0.488105 | 4:-81185595 | MsG0480023129.01.T01:CDS |
| ATAGCTACTGAAGAGATTGC+TGG | 0.488901 | 4:-81187093 | MsG0480023129.01.T01:CDS |
| TCATTGTAGGATGAAACAAT+TGG | 0.490493 | 4:+81187405 | None:intergenic |
| AAAGTGATGTTTCATCTCGT+TGG | 0.495363 | 4:+81187472 | None:intergenic |
| TTGTCAGGTTGACCATGAAC+AGG | 0.495557 | 4:+81186970 | None:intergenic |
| AGGATCGACAAATCCATTGT+TGG | 0.495662 | 4:-81186622 | MsG0480023129.01.T01:CDS |
| AGGTGTTGGAAGAGGCCAAA+TGG | 0.496352 | 4:-81186243 | MsG0480023129.01.T01:CDS |
| ACAGGTACACGGGTGATACC+TGG | 0.496559 | 4:+81186988 | None:intergenic |
| GCAACAGAAGATAAATTAGC+AGG | 0.496917 | 4:+81186475 | None:intergenic |
| TTACCCTCATGTGCTAAGTC+AGG | 0.501551 | 4:-81185801 | MsG0480023129.01.T01:CDS |
| GCAAGAATTATGGACAGGAT+TGG | 0.508761 | 4:-81185521 | MsG0480023129.01.T01:CDS |
| AGATCAACCATGGTAAGATC+AGG | 0.510480 | 4:+81187012 | None:intergenic |
| AATCAAAGTCAAAGGAGTGT+TGG | 0.514073 | 4:+81187053 | None:intergenic |
| TTCCAATCTAGCATCTTCAT+AGG | 0.522397 | 4:+81186681 | None:intergenic |
| GTCTATCAGGATGTCACAAA+TGG | 0.523985 | 4:-81186845 | MsG0480023129.01.T01:CDS |
| GATGACGTTAACATCGGTCT+AGG | 0.524437 | 4:-81186739 | MsG0480023129.01.T01:CDS |
| CTCTCAATCCCACCACCACT+TGG | 0.524638 | 4:+81185632 | None:intergenic |
| TTGGAAGAGGCCAAATGGAT+TGG | 0.525795 | 4:-81186238 | MsG0480023129.01.T01:CDS |
| AGAGATTAAGGTGTTGGAAG+AGG | 0.526369 | 4:-81186251 | MsG0480023129.01.T01:CDS |
| GAGATTGCTGGTTCTGCCAA+AGG | 0.527844 | 4:-81187081 | MsG0480023129.01.T01:CDS |
| TTCTTGACAATCAAAGTCAA+AGG | 0.538928 | 4:+81187045 | None:intergenic |
| ATCAGCTTGCCACGTGGACA+AGG | 0.540401 | 4:-81187243 | MsG0480023129.01.T01:CDS |
| CTGTTGCAAGAATTATGGAC+AGG | 0.542640 | 4:-81185526 | MsG0480023129.01.T01:CDS |
| AGATTGCTGGTTCTGCCAAA+GGG | 0.550639 | 4:-81187080 | MsG0480023129.01.T01:CDS |
| GAGGTTGAGCTTGCTCAACA+TGG | 0.552600 | 4:+81187442 | None:intergenic |
| ATACTGCAGAGAAAAGTTAA+GGG | 0.552698 | 4:-81186178 | MsG0480023129.01.T01:CDS |
| AATGCATGTGCTTGTCCTCA+GGG | 0.555069 | 4:+81186365 | None:intergenic |
| CAAGTGGTGGTGGGATTGAG+AGG | 0.561054 | 4:-81185631 | MsG0480023129.01.T01:CDS |
| TGGTTGATAAAACTGGTTTG+AGG | 0.562514 | 4:-81186825 | MsG0480023129.01.T01:CDS |
| ATTGGTGCAACAACAGAAAG+AGG | 0.569115 | 4:+81187423 | None:intergenic |
| TCCTGAAGGATTGTTGGAGA+AGG | 0.571650 | 4:-81186770 | MsG0480023129.01.T01:CDS |
| AGCTAAAGATTCAAGGACAC+TGG | 0.572468 | 4:+81187269 | None:intergenic |
| TAAAATCAACAGTGGCGGAA+AGG | 0.574096 | 4:+81186878 | None:intergenic |
| TCCCTCTTTCCAGAAATAGA+CGG | 0.574959 | 4:+81185593 | None:intergenic |
| TCCGTCTATTTCTGGAAAGA+GGG | 0.578371 | 4:-81185594 | MsG0480023129.01.T01:CDS |
| ACTGGAAGATTGTTCTGAGG+AGG | 0.593317 | 4:-81185748 | MsG0480023129.01.T01:CDS |
| CAACAGCTTCCATAACATGT+TGG | 0.595030 | 4:+81185993 | None:intergenic |
| TGTTATGGAAGCTGTTGAGA+TGG | 0.595595 | 4:-81185987 | MsG0480023129.01.T01:CDS |
| GATTAACAATGATTTGCAGA+AGG | 0.597025 | 4:-81185678 | MsG0480023129.01.T01:CDS |
| TTTCTCGCCTGCTCTGCGAG+TGG | 0.597179 | 4:+81186045 | None:intergenic |
| AAAGCCTGACTTAGCACATG+AGG | 0.603423 | 4:+81185797 | None:intergenic |
| CTTACTGGAAGATTGTTCTG+AGG | 0.604360 | 4:-81185751 | MsG0480023129.01.T01:CDS |
| TTGAAAGTGGATGATTCTGA+AGG | 0.605131 | 4:+81187190 | None:intergenic |
| GTTGACCATGAACAGGTACA+CGG | 0.609991 | 4:+81186977 | None:intergenic |
| TGAGACGCCTTAGATTCTCA+AGG | 0.620323 | 4:+81187358 | None:intergenic |
| AAAGCAGATAAATCTCCTGA+AGG | 0.623780 | 4:-81186784 | MsG0480023129.01.T01:CDS |
| GAGACGCCTTAGATTCTCAA+GGG | 0.625868 | 4:+81187359 | None:intergenic |
| TAAAACAGGAATACCAACAA+TGG | 0.629558 | 4:+81186609 | None:intergenic |
| TTATACTCGAGCAAATACTC+AGG | 0.634135 | 4:+81185938 | None:intergenic |
| TTGACCATGAACAGGTACAC+GGG | 0.647300 | 4:+81186978 | None:intergenic |
| AAATTGATGTTGTTAATCTG+AGG | 0.650762 | 4:-81185826 | MsG0480023129.01.T01:CDS |
| AAGCCTGACTTAGCACATGA+GGG | 0.658164 | 4:+81185798 | None:intergenic |
| AGTAGTAAAATCAACAGTGG+CGG | 0.662087 | 4:+81186873 | None:intergenic |
| GTGCAGATTCCTTGTCCACG+TGG | 0.668352 | 4:+81187234 | None:intergenic |
| CATGTGAAGCTTGAAGGTGT+TGG | 0.674753 | 4:-81185851 | MsG0480023129.01.T01:CDS |
| TGGTGTTCCTGATCTTACCA+TGG | 0.685138 | 4:-81187019 | MsG0480023129.01.T01:CDS |
| ACTGCTGATGACGTTAACAT+CGG | 0.693473 | 4:-81186745 | MsG0480023129.01.T01:CDS |
| GCTGGTATCAGCTTGCCACG+TGG | 0.693476 | 4:-81187249 | MsG0480023129.01.T01:CDS |
| GTGGACAAGGAATCTGCACG+AGG | 0.706834 | 4:-81187230 | MsG0480023129.01.T01:CDS |
| ACAAGTAGTAAAATCAACAG+TGG | 0.707970 | 4:+81186870 | None:intergenic |
| GATACCTGGAAGATCAACCA+TGG | 0.712735 | 4:+81187002 | None:intergenic |
| TGGACAAGGAATCTGCACGA+GGG | 0.740882 | 4:-81187229 | MsG0480023129.01.T01:CDS |
| TGATTTCGAAGAGTACCCTG+AGG | 0.804578 | 4:-81186380 | MsG0480023129.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCAGATAAAAGATATTATTA+TGG | - | Chr4:81186092-81186111 | MsG0480023129.01.T01:CDS | 15.0% |
| !!! | TGCAAAAAAGAATTTTCTTA+TGG | - | Chr4:81186755-81186774 | MsG0480023129.01.T01:CDS | 20.0% |
| !!! | TTAACTTTGTTGATAATGTT+TGG | - | Chr4:81186892-81186911 | MsG0480023129.01.T01:CDS | 20.0% |
| ! | AAATTGATGTTGTTAATCTG+AGG | - | Chr4:81187204-81187223 | MsG0480023129.01.T01:CDS | 25.0% |
| ! | ACATTATCAACAAAGTTAAC+TGG | + | Chr4:81186891-81186910 | None:intergenic | 25.0% |
| ! | ACTTTGATTGTCAAGAAAAA+TGG | - | Chr4:81185991-81186010 | MsG0480023129.01.T01:CDS | 25.0% |
| ! | TTCAAATTATTATCAGCTTC+AGG | - | Chr4:81186959-81186978 | MsG0480023129.01.T01:CDS | 25.0% |
| ! | TTCAAGATAATACTTTCTTC+AGG | + | Chr4:81186129-81186148 | None:intergenic | 25.0% |
| !! | TTTTCTTATGGAAGAGATTA+AGG | - | Chr4:81186767-81186786 | MsG0480023129.01.T01:CDS | 25.0% |
| AATACTGCAGAGAAAAGTTA+AGG | - | Chr4:81186851-81186870 | MsG0480023129.01.T01:CDS | 30.0% | |
| ACAAGTAGTAAAATCAACAG+TGG | + | Chr4:81186163-81186182 | None:intergenic | 30.0% | |
| AGTATTTGCTCGAGTATAAT+AGG | - | Chr4:81187096-81187115 | MsG0480023129.01.T01:CDS | 30.0% | |
| ATACTGCAGAGAAAAGTTAA+GGG | - | Chr4:81186852-81186871 | MsG0480023129.01.T01:CDS | 30.0% | |
| ATCTGATCATAGATATTGTC+AGG | + | Chr4:81186078-81186097 | None:intergenic | 30.0% | |
| ATTGTCAAAAATGCAGTTCT+TGG | + | Chr4:81186834-81186853 | None:intergenic | 30.0% | |
| CAAAGTTCTTAGAGAAAGTA+AGG | - | Chr4:81187478-81187497 | MsG0480023129.01.T01:CDS | 30.0% | |
| CTCAAAAAGATTCTTCTTAC+AGG | - | Chr4:81186627-81186646 | MsG0480023129.01.T01:CDS | 30.0% | |
| GAACTCTTGTTAGAATTCAA+TGG | - | Chr4:81185868-81185887 | MsG0480023129.01.T01:CDS | 30.0% | |
| TAAAACAGGAATACCAACAA+TGG | + | Chr4:81186424-81186443 | None:intergenic | 30.0% | |
| TCATTGTAGGATGAAACAAT+TGG | + | Chr4:81185628-81185647 | None:intergenic | 30.0% | |
| TTCTTGACAATCAAAGTCAA+AGG | + | Chr4:81185988-81186007 | None:intergenic | 30.0% | |
| TTGAATTCTAACAAGAGTTC+TGG | + | Chr4:81185868-81185887 | None:intergenic | 30.0% | |
| ! | ACAGCTTTTATGCATATTCT+TGG | - | Chr4:81186588-81186607 | MsG0480023129.01.T01:CDS | 30.0% |
| ! | GATTAACAATGATTTGCAGA+AGG | - | Chr4:81187352-81187371 | MsG0480023129.01.T01:CDS | 30.0% |
| ! | TTAATCTTCTTGATGATCTC+TGG | + | Chr4:81186495-81186514 | None:intergenic | 30.0% |
| !! | TCACAAATGGTTGATAAAAC+TGG | - | Chr4:81186198-81186217 | MsG0480023129.01.T01:CDS | 30.0% |
| !!! | TGGACGTATTTTTTCATTGT+AGG | + | Chr4:81185641-81185660 | None:intergenic | 30.0% |
| AAAGCAGATAAATCTCCTGA+AGG | - | Chr4:81186246-81186265 | MsG0480023129.01.T01:CDS | 35.0% | |
| AAAGTGATGTTTCATCTCGT+TGG | + | Chr4:81185561-81185580 | None:intergenic | 35.0% | |
| AAGTTCAGTCCAACATGTTA+TGG | - | Chr4:81187028-81187047 | MsG0480023129.01.T01:CDS | 35.0% | |
| AGTAGTAAAATCAACAGTGG+CGG | + | Chr4:81186160-81186179 | None:intergenic | 35.0% | |
| ATTTGGTAGACCAATCCATT+TGG | + | Chr4:81186805-81186824 | None:intergenic | 35.0% | |
| GCAACAGAAGATAAATTAGC+AGG | + | Chr4:81186558-81186577 | None:intergenic | 35.0% | |
| TAAATCTCCTGAAGGATTGT+TGG | - | Chr4:81186254-81186273 | MsG0480023129.01.T01:CDS | 35.0% | |
| TATGGAAGAGATTAAGGTGT+TGG | - | Chr4:81186773-81186792 | MsG0480023129.01.T01:CDS | 35.0% | |
| TCTCCAACAACAACAATTGT+TGG | + | Chr4:81185724-81185743 | None:intergenic | 35.0% | |
| TGATACCAGCTAAAGATTCA+AGG | + | Chr4:81185771-81185790 | None:intergenic | 35.0% | |
| TTACTACTTGTGAGTCTATC+AGG | - | Chr4:81186172-81186191 | MsG0480023129.01.T01:CDS | 35.0% | |
| TTATACTCGAGCAAATACTC+AGG | + | Chr4:81187095-81187114 | None:intergenic | 35.0% | |
| TTCCAATCTAGCATCTTCAT+AGG | + | Chr4:81186352-81186371 | None:intergenic | 35.0% | |
| TTGAAAGTGGATGATTCTGA+AGG | + | Chr4:81185843-81185862 | None:intergenic | 35.0% | |
| ! | AATCAAAGTCAAAGGAGTGT+TGG | + | Chr4:81185980-81185999 | None:intergenic | 35.0% |
| ! | AATGATCTTTTGTCTCCAAG+TGG | - | Chr4:81187383-81187402 | MsG0480023129.01.T01:CDS | 35.0% |
| ! | ACTAACAGAAGCTTTTGTAG+TGG | + | Chr4:81185533-81185552 | None:intergenic | 35.0% |
| ! | ATTCTGAAGGCGCATAATTA+AGG | + | Chr4:81185830-81185849 | None:intergenic | 35.0% |
| ! | CTCTAAGAACTTTGACACTT+CGG | + | Chr4:81187472-81187491 | None:intergenic | 35.0% |
| ! | CTTCCAACAATTGTTGTTGT+TGG | - | Chr4:81185718-81185737 | MsG0480023129.01.T01:CDS | 35.0% |
| ! | TTCTGAAGGCGCATAATTAA+GGG | + | Chr4:81185829-81185848 | None:intergenic | 35.0% |
| !! | TGGTTGATAAAACTGGTTTG+AGG | - | Chr4:81186205-81186224 | MsG0480023129.01.T01:CDS | 35.0% |
| !!! | AAGTCAGGCTTTTGATTTGA+AGG | - | Chr4:81187244-81187263 | MsG0480023129.01.T01:CDS | 35.0% |
| ACAAGCTTCTGAGCTAAAAC+AGG | + | Chr4:81186438-81186457 | None:intergenic | 40.0% | |
| AGATCAACCATGGTAAGATC+AGG | + | Chr4:81186021-81186040 | None:intergenic | 40.0% | |
| AGCTAAAGATTCAAGGACAC+TGG | + | Chr4:81185764-81185783 | None:intergenic | 40.0% | |
| AGGATCGACAAATCCATTGT+TGG | - | Chr4:81186408-81186427 | MsG0480023129.01.T01:CDS | 40.0% | |
| AGTCTCACTCACTTCTTTCT+AGG | - | Chr4:81186388-81186407 | MsG0480023129.01.T01:CDS | 40.0% | |
| AGTGTCCTTGAATCTTTAGC+TGG | - | Chr4:81185763-81185782 | MsG0480023129.01.T01:CDS | 40.0% | |
| ATAGCTACTGAAGAGATTGC+TGG | - | Chr4:81185937-81185956 | MsG0480023129.01.T01:CDS | 40.0% | |
| ATTGGTGCAACAACAGAAAG+AGG | + | Chr4:81185610-81185629 | None:intergenic | 40.0% | |
| CAACAGCTTCCATAACATGT+TGG | + | Chr4:81187040-81187059 | None:intergenic | 40.0% | |
| CATAGGTCTCATCTCCAATT+CGG | + | Chr4:81186335-81186354 | None:intergenic | 40.0% | |
| CTGTTGCAAGAATTATGGAC+AGG | - | Chr4:81187504-81187523 | MsG0480023129.01.T01:CDS | 40.0% | |
| CTTACTGGAAGATTGTTCTG+AGG | - | Chr4:81187279-81187298 | MsG0480023129.01.T01:CDS | 40.0% | |
| GACCTATGAAGATGCTAGAT+TGG | - | Chr4:81186347-81186366 | MsG0480023129.01.T01:CDS | 40.0% | |
| GCAAGAATTATGGACAGGAT+TGG | - | Chr4:81187509-81187528 | MsG0480023129.01.T01:CDS | 40.0% | |
| GCAGTTCTTGGCATGAAATT+TGG | + | Chr4:81186822-81186841 | None:intergenic | 40.0% | |
| GGAGACTGTTGCAAGAATTA+TGG | - | Chr4:81187499-81187518 | MsG0480023129.01.T01:CDS | 40.0% | |
| GTCTATCAGGATGTCACAAA+TGG | - | Chr4:81186185-81186204 | MsG0480023129.01.T01:CDS | 40.0% | |
| GTTGTTGGAGATCAATCTTC+AGG | - | Chr4:81185733-81185752 | MsG0480023129.01.T01:CDS | 40.0% | |
| TCCCTCTTTCCAGAAATAGA+CGG | + | Chr4:81187440-81187459 | None:intergenic | 40.0% | |
| TGGAAGCTGAATTCCTTCTT+TGG | + | Chr4:81185704-81185723 | None:intergenic | 40.0% | |
| TGTTATGGAAGCTGTTGAGA+TGG | - | Chr4:81187043-81187062 | MsG0480023129.01.T01:CDS | 40.0% | |
| ! | ACTGCTGATGACGTTAACAT+CGG | - | Chr4:81186285-81186304 | MsG0480023129.01.T01:CDS | 40.0% |
| ! | TAAAATCAACAGTGGCGGAA+AGG | + | Chr4:81186155-81186174 | None:intergenic | 40.0% |
| ! | TTTAGCTCAGAAGCTTGTTC+AGG | - | Chr4:81186440-81186459 | MsG0480023129.01.T01:CDS | 40.0% |
| !! | AAGAGTTCTGGCTTTGAAAG+TGG | + | Chr4:81185856-81185875 | None:intergenic | 40.0% |
| !! | AGAGATTAAGGTGTTGGAAG+AGG | - | Chr4:81186779-81186798 | MsG0480023129.01.T01:CDS | 40.0% |
| !! | TCCGTCTATTTCTGGAAAGA+GGG | - | Chr4:81187436-81187455 | MsG0480023129.01.T01:CDS | 40.0% |
| !!! | AGGCTTTTGATTTGAAGGCT+AGG | - | Chr4:81187249-81187268 | MsG0480023129.01.T01:CDS | 40.0% |
| AAAGCCTGACTTAGCACATG+AGG | + | Chr4:81187236-81187255 | None:intergenic | 45.0% | |
| AAGCCTGACTTAGCACATGA+GGG | + | Chr4:81187235-81187254 | None:intergenic | 45.0% | |
| AATGCATGTGCTTGTCCTCA+GGG | + | Chr4:81186668-81186687 | None:intergenic | 45.0% | |
| ACCTTCTCCAACAATCCTTC+AGG | + | Chr4:81186264-81186283 | None:intergenic | 45.0% | |
| AGGCTAGGATGATTGCTTAC+TGG | - | Chr4:81187264-81187283 | MsG0480023129.01.T01:CDS | 45.0% | |
| CCAACACATGTGAAGCTTGA+AGG | - | Chr4:81187173-81187192 | MsG0480023129.01.T01:CDS | 45.0% | |
| CCTTCAAGCTTCACATGTGT+TGG | + | Chr4:81187176-81187195 | None:intergenic | 45.0% | |
| CGTCTCAACATTGCCAAAGA+AGG | - | Chr4:81185688-81185707 | MsG0480023129.01.T01:CDS | 45.0% | |
| CTTACCATGGTTGATCTTCC+AGG | - | Chr4:81186024-81186043 | MsG0480023129.01.T01:CDS | 45.0% | |
| GAAGAGTCTCCGTCTATTTC+TGG | - | Chr4:81187428-81187447 | MsG0480023129.01.T01:CDS | 45.0% | |
| GAGACGCCTTAGATTCTCAA+GGG | + | Chr4:81185674-81185693 | None:intergenic | 45.0% | |
| GATACCTGGAAGATCAACCA+TGG | + | Chr4:81186031-81186050 | None:intergenic | 45.0% | |
| GATGACGTTAACATCGGTCT+AGG | - | Chr4:81186291-81186310 | MsG0480023129.01.T01:CDS | 45.0% | |
| GTTGACCATGAACAGGTACA+CGG | + | Chr4:81186056-81186075 | None:intergenic | 45.0% | |
| TCCTGAAGGATTGTTGGAGA+AGG | - | Chr4:81186260-81186279 | MsG0480023129.01.T01:CDS | 45.0% | |
| TGAGACGCCTTAGATTCTCA+AGG | + | Chr4:81185675-81185694 | None:intergenic | 45.0% | |
| TGGTGTTCCTGATCTTACCA+TGG | - | Chr4:81186011-81186030 | MsG0480023129.01.T01:CDS | 45.0% | |
| TTACCCTCATGTGCTAAGTC+AGG | - | Chr4:81187229-81187248 | MsG0480023129.01.T01:CDS | 45.0% | |
| TTGACCATGAACAGGTACAC+GGG | + | Chr4:81186055-81186074 | None:intergenic | 45.0% | |
| TTGGAAGAGGCCAAATGGAT+TGG | - | Chr4:81186792-81186811 | MsG0480023129.01.T01:CDS | 45.0% | |
| ! | CATGTGAAGCTTGAAGGTGT+TGG | - | Chr4:81187179-81187198 | MsG0480023129.01.T01:CDS | 45.0% |
| ! | GATCTTTTGTCTCCAAGTGG+TGG | - | Chr4:81187386-81187405 | MsG0480023129.01.T01:CDS | 45.0% |
| ! | TTTTGTCTCCAAGTGGTGGT+GGG | - | Chr4:81187390-81187409 | MsG0480023129.01.T01:CDS | 45.0% |
| !! | ACTGGAAGATTGTTCTGAGG+AGG | - | Chr4:81187282-81187301 | MsG0480023129.01.T01:CDS | 45.0% |
| !! | AGATTGCTGGTTCTGCCAAA+GGG | - | Chr4:81185950-81185969 | MsG0480023129.01.T01:CDS | 45.0% |
| !! | AGGAGTGTTGGAAATCCCTT+TGG | + | Chr4:81185968-81185987 | None:intergenic | 45.0% |
| !! | CTCCGTCTATTTCTGGAAAG+AGG | - | Chr4:81187435-81187454 | MsG0480023129.01.T01:CDS | 45.0% |
| !! | TGATTTCGAAGAGTACCCTG+AGG | - | Chr4:81186650-81186669 | MsG0480023129.01.T01:CDS | 45.0% |
| !! | TTGTCAGGTTGACCATGAAC+AGG | + | Chr4:81186063-81186082 | None:intergenic | 45.0% |
| ATCACCCGTGTACCTGTTCA+TGG | - | Chr4:81186048-81186067 | MsG0480023129.01.T01:CDS | 50.0% | |
| CAATGCATGTGCTTGTCCTC+AGG | + | Chr4:81186669-81186688 | None:intergenic | 50.0% | |
| GTCTGTGTGCGAAACCGAAT+TGG | - | Chr4:81186318-81186337 | MsG0480023129.01.T01:CDS | 50.0% | |
| TCGACGCCCTTGAGAATCTA+AGG | - | Chr4:81185665-81185684 | MsG0480023129.01.T01:CDS | 50.0% | |
| TGGACAAGGAATCTGCACGA+GGG | - | Chr4:81185801-81185820 | MsG0480023129.01.T01:CDS | 50.0% | |
| ! | CTTTTGTCTCCAAGTGGTGG+TGG | - | Chr4:81187389-81187408 | MsG0480023129.01.T01:CDS | 50.0% |
| ! | GAGGTTGAGCTTGCTCAACA+TGG | + | Chr4:81185591-81185610 | None:intergenic | 50.0% |
| !! | AGGTGTTGGAAGAGGCCAAA+TGG | - | Chr4:81186787-81186806 | MsG0480023129.01.T01:CDS | 50.0% |
| !! | GAGATTGCTGGTTCTGCCAA+AGG | - | Chr4:81185949-81185968 | MsG0480023129.01.T01:CDS | 50.0% |
| ACAGGTACACGGGTGATACC+TGG | + | Chr4:81186045-81186064 | None:intergenic | 55.0% | |
| ATCAGCTTGCCACGTGGACA+AGG | - | Chr4:81185787-81185806 | MsG0480023129.01.T01:CDS | 55.0% | |
| CTCTCAATCCCACCACCACT+TGG | + | Chr4:81187401-81187420 | None:intergenic | 55.0% | |
| GTGCAGATTCCTTGTCCACG+TGG | + | Chr4:81185799-81185818 | None:intergenic | 55.0% | |
| GTGGACAAGGAATCTGCACG+AGG | - | Chr4:81185800-81185819 | MsG0480023129.01.T01:CDS | 55.0% | |
| !! | CAAGTGGTGGTGGGATTGAG+AGG | - | Chr4:81187399-81187418 | MsG0480023129.01.T01:CDS | 55.0% |
| !! | TTCTCAAGGGCGTCGAGAAC+TGG | + | Chr4:81185661-81185680 | None:intergenic | 55.0% |
| GCTGGTATCAGCTTGCCACG+TGG | - | Chr4:81185781-81185800 | MsG0480023129.01.T01:CDS | 60.0% | |
| TTTCTCGCCTGCTCTGCGAG+TGG | + | Chr4:81186988-81187007 | None:intergenic | 60.0% | |
| CAGGTGTCCACTCGCAGAGC+AGG | - | Chr4:81186978-81186997 | MsG0480023129.01.T01:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 81185508 | 81187544 | 81185508 | ID=MsG0480023129.01;Name=MsG0480023129.01 |
| Chr4 | mRNA | 81185508 | 81187544 | 81185508 | ID=MsG0480023129.01.T01;Parent=MsG0480023129.01;Name=MsG0480023129.01.T01;_AED=0.47;_eAED=0.47;_QI=0|-1|0|1|-1|1|1|0|678 |
| Chr4 | exon | 81185508 | 81187544 | 81185508 | ID=MsG0480023129.01.T01:exon:670;Parent=MsG0480023129.01.T01 |
| Chr4 | CDS | 81185508 | 81187544 | 81185508 | ID=MsG0480023129.01.T01:cds;Parent=MsG0480023129.01.T01 |
| Gene Sequence |
| Protein sequence |
