AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480023373.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023373.01.T01 AT5G10010 68.328 341 101 2 2 342 101 434 2.47e-168 476
MsG0480023373.01.T01 AT5G64910 58.841 345 128 5 1 342 141 474 5.28e-127 372
MsG0480023373.01.T01 AT5G64910 58.841 345 128 5 1 342 141 474 5.28e-127 372
MsG0480023373.01.T01 AT5G64910 58.841 345 128 5 1 342 141 474 5.28e-127 372
MsG0480023373.01.T01 AT5G64910 57.317 328 127 4 1 326 141 457 1.34e-115 343
MsG0480023373.01.T01 AT5G64910 57.012 328 125 5 1 326 141 454 5.67e-113 337

Find 112 sgRNAs with CRISPR-Local

Find 309 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCCACCATCTGATAAAAT+TGG 0.157161 4:-84321459 MsG0480023373.01.T01:CDS
TACCTATGTAATTGTCTAAA+AGG 0.186133 4:-84318598 MsG0480023373.01.T01:three_prime_UTR
TCAAATTCATCTTCCTTAAA+TGG 0.186723 4:+84320092 None:intergenic
CTTCGAAGATAAGCGTAATT+TGG 0.193911 4:-84322798 MsG0480023373.01.T01:intron
GGATAATTGAGACGTGTTTC+TGG 0.202699 4:-84318519 MsG0480023373.01.T01:three_prime_UTR
CGCTTATCTTCGAAGTATTC+AGG 0.208544 4:+84322806 None:intergenic
GGAAAGAAGGTTTACCTATT+TGG 0.212336 4:-84322116 MsG0480023373.01.T01:CDS
TCCTATGAAGCAAATGAAAA+TGG 0.241093 4:-84321400 MsG0480023373.01.T01:CDS
GACACGCTCTTACATTTAAA+AGG 0.263703 4:+84323080 None:intergenic
AGATTTCTATCAGCCATTTA+AGG 0.268276 4:-84320105 MsG0480023373.01.T01:CDS
TCTTTAATCTATCCAACTTC+AGG 0.314948 4:+84320277 None:intergenic
TAAATCATAATTACCGGCTT+TGG 0.319009 4:+84320032 None:intergenic
GGCTCAACTGGATATATTAT+CGG 0.334796 4:+84320053 None:intergenic
GAAGTATTCAGGTTCGGATT+GGG 0.348830 4:+84322817 None:intergenic
TGCAGTCTCCATTCATAAAC+AGG 0.360207 4:-84318754 MsG0480023373.01.T01:intron
AATATCTTTACTTACCTTGA+AGG 0.363364 4:+84319414 None:intergenic
ATTACCGGCTTTGGCTCAAC+TGG 0.372230 4:+84320041 None:intergenic
GAAAATTGCAATTGTTGTCT+TGG 0.379458 4:+84318695 None:intergenic
CATAGGTAAAGAAAATTTGA+TGG 0.380350 4:+84318613 None:intergenic
CACCAAAAGTACCTCTCTAT+TGG 0.385186 4:+84319276 None:intergenic
GTTGTCGTTTGCAGCTCAAC+TGG 0.393426 4:-84321971 MsG0480023373.01.T01:intron
TTCCACCATCTGATAAAATT+GGG 0.396244 4:-84321458 MsG0480023373.01.T01:CDS
ATACATTTAATTTAATTTGA+AGG 0.398112 4:+84318404 None:intergenic
ATGGTGTTTGCGTTCGAATT+CGG 0.399450 4:+84322965 None:intergenic
CCGTAATACCTGTTTATGAA+TGG 0.401773 4:+84318746 None:intergenic
TACGCTCGGTGCAACCAAAT+AGG 0.402505 4:+84322102 None:intergenic
CGAAGTATTCAGGTTCGGAT+TGG 0.407077 4:+84322816 None:intergenic
ATGGAGCACCAAGAGGTTGC+CGG 0.407146 4:+84318632 None:intergenic
ACCACCTACTTCACTTATCT+AGG 0.415880 4:+84318544 None:intergenic
ATTTGTCAGGGAAAAGGTTC+GGG 0.419026 4:-84319311 MsG0480023373.01.T01:CDS
CAACAAACCTCAGTGCCAAC+AGG 0.419531 4:+84322419 None:intergenic
TCTTCTTATCGATTTGAATC+CGG 0.420096 4:-84323057 MsG0480023373.01.T01:five_prime_UTR
GTAATATCAGTGGGACCAAT+TGG 0.421390 4:-84322324 MsG0480023373.01.T01:intron
AGGTTCGGATTGGGGTTTAG+AGG 0.423673 4:+84322826 None:intergenic
ATCTTCGAAGTATTCAGGTT+CGG 0.427533 4:+84322811 None:intergenic
TTGGGAATCTTCGGTGTGCT+TGG 0.428739 4:+84322913 None:intergenic
ACCTGATGTGTCAGGTGTTA+AGG 0.432564 4:-84319076 MsG0480023373.01.T01:intron
GAAGAGGGTGGCCTCTTGTA+TGG 0.433536 4:-84322137 MsG0480023373.01.T01:CDS
TCTTTCTTTAGGAATTTGTC+AGG 0.440455 4:-84319324 MsG0480023373.01.T01:intron
ACCTATGTAATTGTCTAAAA+GGG 0.440773 4:-84318597 MsG0480023373.01.T01:three_prime_UTR
AGCAACAGGTTGGGAATCTT+CGG 0.442309 4:+84322904 None:intergenic
AGGTCTTCTGTGAATTTGAT+TGG 0.443236 4:-84319900 MsG0480023373.01.T01:CDS
GAGGCGTTTAGCTTTAGGTT+TGG 0.448003 4:+84322853 None:intergenic
AATTTGTCAGGGAAAAGGTT+CGG 0.448510 4:-84319312 MsG0480023373.01.T01:CDS
TTAGGAATTTGTCAGGGAAA+AGG 0.455764 4:-84319317 MsG0480023373.01.T01:intron
AACTTCATATAGAACAAATA+CGG 0.461814 4:+84318658 None:intergenic
AGCACCTTTCCTCATTGTGA+TGG 0.464290 4:+84322946 None:intergenic
TTTGATACACAGCATCCAAT+TGG 0.469259 4:+84322309 None:intergenic
TGCTTTGAAACACCTGAAGT+TGG 0.469556 4:-84320289 MsG0480023373.01.T01:CDS
GAGCTTACCGCTACAACAAC+AGG 0.470450 4:+84321913 None:intergenic
TTGAGACGAAGCAACAGGTT+GGG 0.473888 4:+84322895 None:intergenic
CTGGGTTCCGTACATTCCTC+TGG 0.477758 4:-84321376 MsG0480023373.01.T01:CDS
CCATTCATAAACAGGTATTA+CGG 0.479214 4:-84318746 MsG0480023373.01.T01:CDS
TGAATCGAAGGCGCTAGATC+CGG 0.485544 4:+84323038 None:intergenic
GTTTACTGATAAACTTATTG+AGG 0.486345 4:-84319467 MsG0480023373.01.T01:CDS
TGGCCTCTTGTATGGAAAGA+AGG 0.486407 4:-84322129 MsG0480023373.01.T01:CDS
GGTCTTCTGTGAATTTGATT+GGG 0.487595 4:-84319899 MsG0480023373.01.T01:CDS
TGAAGCAAATGAAAATGGAC+TGG 0.492057 4:-84321395 MsG0480023373.01.T01:CDS
GCTCAACTGGTCATGCATCA+AGG 0.495363 4:-84321958 MsG0480023373.01.T01:CDS
TTTACTGATAAACTTATTGA+GGG 0.500654 4:-84319466 MsG0480023373.01.T01:CDS
ACCTGACACATCAGGTGCAT+CGG 0.502548 4:+84319083 None:intergenic
CTCAACTGGTCATGCATCAA+GGG 0.504378 4:-84321957 MsG0480023373.01.T01:CDS
CCTGACACATCAGGTGCATC+GGG 0.504797 4:+84319084 None:intergenic
GGTGCATCGGGAGATGGAAC+GGG 0.505043 4:+84319096 None:intergenic
TCTTGCGTTGCACCCAAAGA+AGG 0.511738 4:-84321174 MsG0480023373.01.T01:intron
TATATTTATATATAAAATCA+AGG 0.514458 4:+84323103 None:intergenic
ACCTTAACACCTGACACATC+AGG 0.515689 4:+84319075 None:intergenic
TTCCGCACTCATTTCAGCAA+TGG 0.517076 4:+84319161 None:intergenic
AAGTATTCAGGTTCGGATTG+GGG 0.518136 4:+84322818 None:intergenic
CCCGATGCACCTGATGTGTC+AGG 0.518892 4:-84319084 MsG0480023373.01.T01:CDS
GAGACTTCAGTCTATCAACT+TGG 0.519749 4:+84321206 None:intergenic
CTTGAGACGAAGCAACAGGT+TGG 0.521578 4:+84322894 None:intergenic
CGCTGCTCCAGAGGAATGTA+CGG 0.522172 4:+84321369 None:intergenic
AAGTTTACCCGGCAACCTCT+TGG 0.530861 4:-84318640 MsG0480023373.01.T01:three_prime_UTR
AAATACGGGCAAAACAAGCC+AGG 0.542281 4:+84318673 None:intergenic
ACATCAGGTGCATCGGGAGA+TGG 0.546211 4:+84319090 None:intergenic
AGGTGCATCGGGAGATGGAA+CGG 0.548169 4:+84319095 None:intergenic
TGGAGCACCAAGAGGTTGCC+GGG 0.549875 4:+84318633 None:intergenic
ACTTCATATAGAACAAATAC+GGG 0.555045 4:+84318659 None:intergenic
AAATCCTAGATAAGTGAAGT+AGG 0.564933 4:-84318548 MsG0480023373.01.T01:three_prime_UTR
TGGCTCGAAACATTCCCTGT+TGG 0.567509 4:-84322434 MsG0480023373.01.T01:CDS
GATGCATACCGCTGCTCCAG+AGG 0.579974 4:+84321360 None:intergenic
TTTCAGAATGCATTCGAAGA+GGG 0.581363 4:-84322152 MsG0480023373.01.T01:intron
TTGGGAATTAGATGAACTTG+AGG 0.587442 4:-84319881 MsG0480023373.01.T01:intron
AAACCTTCTTTCCATACAAG+AGG 0.588752 4:+84322126 None:intergenic
TACTGATAAACTTATTGAGG+GGG 0.590109 4:-84319464 MsG0480023373.01.T01:CDS
TCTTGTAGGCAAGGGAAGCA+CGG 0.590773 4:-84319191 MsG0480023373.01.T01:intron
GAAGCAAATGAAAATGGACT+GGG 0.591547 4:-84321394 MsG0480023373.01.T01:CDS
ATATCCAGTTGAGCCAAAGC+CGG 0.594956 4:-84320045 MsG0480023373.01.T01:intron
CATAAACAGGTATTACGGAA+AGG 0.597848 4:-84318741 MsG0480023373.01.T01:CDS
TGTTCTATATGAAGTTTACC+CGG 0.600121 4:-84318651 MsG0480023373.01.T01:three_prime_UTR
AGATGAATTTGAACAAAGCA+CGG 0.612836 4:-84320081 MsG0480023373.01.T01:CDS
CGTACATTCCTCTGGAGCAG+CGG 0.615658 4:-84321368 MsG0480023373.01.T01:intron
CAGAATGCATTCGAAGAGGG+TGG 0.615896 4:-84322149 MsG0480023373.01.T01:CDS
CTTTCTTTAGGAATTTGTCA+GGG 0.618977 4:-84319323 MsG0480023373.01.T01:intron
AACATTCCCTGTTGGCACTG+AGG 0.620526 4:-84322426 MsG0480023373.01.T01:intron
TTACTGATAAACTTATTGAG+GGG 0.626862 4:-84319465 MsG0480023373.01.T01:CDS
GTATTACGGAAAGGCTCATG+AGG 0.629234 4:-84318732 MsG0480023373.01.T01:CDS
GATAAGTGAAGTAGGTGGTG+AGG 0.629560 4:-84318540 MsG0480023373.01.T01:three_prime_UTR
AACACCATCACAATGAGGAA+AGG 0.636181 4:-84322950 MsG0480023373.01.T01:exon
AGCAAAGAAAGCCAATAGAG+AGG 0.639340 4:-84319287 MsG0480023373.01.T01:intron
GATTAACTCAGTTCAGAGAG+AGG 0.642388 4:-84321436 MsG0480023373.01.T01:CDS
CTGCATACCTGTTGTTGTAG+CGG 0.645013 4:-84321920 MsG0480023373.01.T01:intron
ATGCTGTGTATCAAATCAAG+TGG 0.652338 4:-84322301 MsG0480023373.01.T01:CDS
AACAAACCTCAGTGCCAACA+GGG 0.653030 4:+84322420 None:intergenic
TCAACTGGTCATGCATCAAG+GGG 0.656478 4:-84321956 MsG0480023373.01.T01:CDS
GTTTCAGAATGCATTCGAAG+AGG 0.661105 4:-84322153 MsG0480023373.01.T01:intron
AAATTTGATGGAGCACCAAG+AGG 0.663966 4:+84318625 None:intergenic
AGCCATTGCTGAAATGAGTG+CGG 0.676262 4:-84319163 MsG0480023373.01.T01:CDS
ACGCAAACACCATCACAATG+AGG 0.678492 4:-84322955 MsG0480023373.01.T01:exon
TCCTAGATAAGTGAAGTAGG+TGG 0.691607 4:-84318545 MsG0480023373.01.T01:three_prime_UTR
TGAATTTGAACAAAGCACGG+AGG 0.770299 4:-84320078 MsG0480023373.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAATAATAATGATAGTTTT+TGG + Chr4:84320436-84320455 None:intergenic 10.0%
!!! AAATAATAATGATAGTTTTT+GGG + Chr4:84320435-84320454 None:intergenic 10.0%
!!! AAATTTTAAATCATAATTAC+CGG + Chr4:84321439-84321458 None:intergenic 10.0%
!!! AATTGTTTTAAATTTTTTAG+TGG - Chr4:84320166-84320185 MsG0480023373.01.T01:intron 10.0%
!!! AGTATTTTTTTCATTAAATT+TGG - Chr4:84319623-84319642 MsG0480023373.01.T01:intron 10.0%
!!! ATACATTTAATTTAATTTGA+AGG + Chr4:84323061-84323080 None:intergenic 10.0%
!! AAAAAATACTGTAATTAGTT+TGG + Chr4:84319613-84319632 None:intergenic 15.0%
!! AACAACAAAAACTAAATAAA+CGG + Chr4:84321046-84321065 None:intergenic 15.0%
!! AATGAACTAATAAACAAATT+AGG + Chr4:84320127-84320146 None:intergenic 15.0%
!! TTAATATTATTAAGGAGAAA+CGG - Chr4:84318882-84318901 MsG0480023373.01.T01:intron 15.0%
!! TTTCGTTTATATCATTAATT+AGG - Chr4:84318921-84318940 MsG0480023373.01.T01:intron 15.0%
!!! AATTTAAAACAATTTACCAA+AGG + Chr4:84320160-84320179 None:intergenic 15.0%
!!! TTTTTTTTTGTAATATCAGT+GGG - Chr4:84319129-84319148 MsG0480023373.01.T01:CDS 15.0%
!!! TTTTTTTTTTGTAATATCAG+TGG - Chr4:84319128-84319147 MsG0480023373.01.T01:CDS 15.0%
!! AACTTCATATAGAACAAATA+CGG + Chr4:84322807-84322826 None:intergenic 20.0%
!! AATAAACTCAATATCATCAT+CGG + Chr4:84322602-84322621 None:intergenic 20.0%
!! AATATACTAATAATGGTCAA+AGG - Chr4:84321938-84321957 MsG0480023373.01.T01:CDS 20.0%
!! AATATTTAATTATCTGGTGT+AGG - Chr4:84321814-84321833 MsG0480023373.01.T01:intron 20.0%
!! AGTAAAAAATATACCTTCTT+TGG + Chr4:84320304-84320323 None:intergenic 20.0%
!! ATATATTATCAGTAAACTGT+AGG + Chr4:84322677-84322696 None:intergenic 20.0%
!! CCAGATAAATATACTAATAA+TGG - Chr4:84321931-84321950 MsG0480023373.01.T01:CDS 20.0%
!! CCATTATTAGTATATTTATC+TGG + Chr4:84321934-84321953 None:intergenic 20.0%
!! CTAGGAAATATTTAATTATC+TGG - Chr4:84321808-84321827 MsG0480023373.01.T01:intron 20.0%
!! GGAAAAAATAATACTTTCAT+AGG + Chr4:84323040-84323059 None:intergenic 20.0%
!! GTAAAAAATATACCTTCTTT+GGG + Chr4:84320303-84320322 None:intergenic 20.0%
!! TTAAATTATTAAACATGCGT+TGG - Chr4:84320379-84320398 MsG0480023373.01.T01:intron 20.0%
!! TTGAAGACATAAATTAAATG+AGG + Chr4:84320227-84320246 None:intergenic 20.0%
!! TTTACTGATAAACTTATTGA+GGG - Chr4:84321996-84322015 MsG0480023373.01.T01:intron 20.0%
!!! ATATGTTCAAATTTTGTATG+AGG - Chr4:84321263-84321282 MsG0480023373.01.T01:intron 20.0%
!!! ATTCGTGTTAATTTTGAATT+TGG - Chr4:84318764-84318783 MsG0480023373.01.T01:intron 20.0%
! AAAGTATATAGCCACTTATT+TGG - Chr4:84320989-84321008 MsG0480023373.01.T01:intron 25.0%
! AACATAATCAACAGAAATTC+AGG + Chr4:84322635-84322654 None:intergenic 25.0%
! AATATCTTTACTTACCTTGA+AGG + Chr4:84322051-84322070 None:intergenic 25.0%
! ACATAATCAACAGAAATTCA+GGG + Chr4:84322634-84322653 None:intergenic 25.0%
! ACCTATGTAATTGTCTAAAA+GGG - Chr4:84322865-84322884 MsG0480023373.01.T01:CDS 25.0%
! ACTAACATTATTGACAGTAA+AGG + Chr4:84320327-84320346 None:intergenic 25.0%
! ACTAGAGATTGTTAAAGTTA+GGG - Chr4:84321904-84321923 MsG0480023373.01.T01:intron 25.0%
! ACTTCATATAGAACAAATAC+GGG + Chr4:84322806-84322825 None:intergenic 25.0%
! AGAAAAATGGCTATTATAAG+CGG + Chr4:84321684-84321703 None:intergenic 25.0%
! AGAGATGATTGTAAATAGTT+AGG - Chr4:84322470-84322489 MsG0480023373.01.T01:intron 25.0%
! ATCTTAACAACTAAGCATTT+AGG + Chr4:84319853-84319872 None:intergenic 25.0%
! ATGCATAATAATACATGTGT+TGG - Chr4:84320516-84320535 MsG0480023373.01.T01:intron 25.0%
! ATTACTAAGGAATTTACCAA+AGG + Chr4:84320194-84320213 None:intergenic 25.0%
! CATAGGTAAAGAAAATTTGA+TGG + Chr4:84322852-84322871 None:intergenic 25.0%
! CTGTATCACATATTATAACA+AGG + Chr4:84321150-84321169 None:intergenic 25.0%
! GTGACAAAGAAAACAAAATA+TGG + Chr4:84321524-84321543 None:intergenic 25.0%
! GTTTACTGATAAACTTATTG+AGG - Chr4:84321995-84322014 MsG0480023373.01.T01:intron 25.0%
! TAAGATAAATATGACCAGAT+CGG + Chr4:84319452-84319471 None:intergenic 25.0%
! TACCTATGTAATTGTCTAAA+AGG - Chr4:84322864-84322883 MsG0480023373.01.T01:CDS 25.0%
! TACTAGAGATTGTTAAAGTT+AGG - Chr4:84321903-84321922 MsG0480023373.01.T01:intron 25.0%
! TCAAATTCATCTTCCTTAAA+TGG + Chr4:84321373-84321392 None:intergenic 25.0%
! TCACATATTATAACAAGGTT+AGG + Chr4:84321145-84321164 None:intergenic 25.0%
! TGCATAATAATACATGTGTT+GGG - Chr4:84320517-84320536 MsG0480023373.01.T01:intron 25.0%
! TTACTGATAAACTTATTGAG+GGG - Chr4:84321997-84322016 MsG0480023373.01.T01:intron 25.0%
! TTATGTCTTAAAGTTTGAGA+TGG - Chr4:84322550-84322569 MsG0480023373.01.T01:intron 25.0%
! TTTCTAAACTGTAACATATC+AGG + Chr4:84321640-84321659 None:intergenic 25.0%
!! AGATATCAGTTTTACTTACT+TGG - Chr4:84319882-84319901 MsG0480023373.01.T01:CDS 25.0%
!! CTATATACTTTTACAATTGC+TGG + Chr4:84320980-84320999 None:intergenic 25.0%
!! CTCAGAAATTCTCTAAAAAA+TGG + Chr4:84322972-84322991 None:intergenic 25.0%
!! CTTGTTATAATATGTGATAC+AGG - Chr4:84321148-84321167 MsG0480023373.01.T01:intron 25.0%
!! TCATTTTAAATAAATGAGCG+TGG - Chr4:84320870-84320889 MsG0480023373.01.T01:intron 25.0%
!! TTAATCCCAATTTTATCAGA+TGG + Chr4:84320012-84320031 None:intergenic 25.0%
!!! AAACTTTAAGACATAAGTTG+AGG + Chr4:84322546-84322565 None:intergenic 25.0%
!!! AAATTTTTTAGTGGTTCCTT+TGG - Chr4:84320175-84320194 MsG0480023373.01.T01:intron 25.0%
!!! AACCAAAACTATTTTTCCTT+TGG + Chr4:84319731-84319750 None:intergenic 25.0%
!!! AACTTTAAGACATAAGTTGA+GGG + Chr4:84322545-84322564 None:intergenic 25.0%
!!! ACCAAAACTATTTTTCCTTT+GGG + Chr4:84319730-84319749 None:intergenic 25.0%
!!! GATATTTTTTCTTACAGTAC+GGG - Chr4:84321493-84321512 MsG0480023373.01.T01:intron 25.0%
!!! GGATATTTTTTCTTACAGTA+CGG - Chr4:84321492-84321511 MsG0480023373.01.T01:intron 25.0%
AAATCCTAGATAAGTGAAGT+AGG - Chr4:84322914-84322933 MsG0480023373.01.T01:CDS 30.0%
AACACCAAGATTCAGAAAAA+TGG + Chr4:84321697-84321716 None:intergenic 30.0%
AACTGCAAATACCAAATAAG+TGG + Chr4:84321003-84321022 None:intergenic 30.0%
AAGATAAATATGACCAGATC+GGG + Chr4:84319451-84319470 None:intergenic 30.0%
AAGGTTAAAAAAGCAGAAAG+CGG + Chr4:84322244-84322263 None:intergenic 30.0%
ACAATAGAGATATCTCAGTT+AGG + Chr4:84318974-84318993 None:intergenic 30.0%
ACTTGACTACATATAAGTGA+TGG + Chr4:84320577-84320596 None:intergenic 30.0%
AGAGAGAGAAAGAAAAAGAT+AGG + Chr4:84318462-84318481 None:intergenic 30.0%
AGATGAATTTGAACAAAGCA+CGG - Chr4:84321381-84321400 MsG0480023373.01.T01:CDS 30.0%
AGATTTCTATCAGCCATTTA+AGG - Chr4:84321357-84321376 MsG0480023373.01.T01:intron 30.0%
ATATTTGGACCATGCATAAT+TGG + Chr4:84319662-84319681 None:intergenic 30.0%
CCATTCATAAACAGGTATTA+CGG - Chr4:84322716-84322735 MsG0480023373.01.T01:intron 30.0%
CTAGAGATTGTTAAAGTTAG+GGG - Chr4:84321905-84321924 MsG0480023373.01.T01:intron 30.0%
CTCTCTTTCTTTCTTTCTTT+AGG - Chr4:84322127-84322146 MsG0480023373.01.T01:CDS 30.0%
CTTTAACAATCTCTAGTAGA+AGG + Chr4:84321901-84321920 None:intergenic 30.0%
CTTTCATCTGTATATCTCTA+AGG - Chr4:84320603-84320622 MsG0480023373.01.T01:intron 30.0%
GAAAATTGCAATTGTTGTCT+TGG + Chr4:84322770-84322789 None:intergenic 30.0%
GAGAGAGAAAGAAAAAGATA+GGG + Chr4:84318461-84318480 None:intergenic 30.0%
GTGAATTTCTTCTACCAAAA+AGG + Chr4:84322444-84322463 None:intergenic 30.0%
TAAACTGTAACATATCAGGA+AGG + Chr4:84321636-84321655 None:intergenic 30.0%
TAACCTAGAAGTGAGTATTA+AGG - Chr4:84319192-84319211 MsG0480023373.01.T01:intron 30.0%
TACTGATAAACTTATTGAGG+GGG - Chr4:84321998-84322017 MsG0480023373.01.T01:intron 30.0%
TATCATCATAGCAGTATTTC+AGG + Chr4:84320480-84320499 None:intergenic 30.0%
TCCTATGAAGCAAATGAAAA+TGG - Chr4:84320062-84320081 MsG0480023373.01.T01:CDS 30.0%
TCTTTAATCTATCCAACTTC+AGG + Chr4:84321188-84321207 None:intergenic 30.0%
TGAAATACTGCTATGATGAT+AGG - Chr4:84320479-84320498 MsG0480023373.01.T01:intron 30.0%
TGAATTGAAACCATGGTAAA+TGG + Chr4:84320755-84320774 None:intergenic 30.0%
TGTTCTATATGAAGTTTACC+CGG - Chr4:84322811-84322830 MsG0480023373.01.T01:CDS 30.0%
TTAATTATCTGGTGTAGGAA+TGG - Chr4:84321819-84321838 MsG0480023373.01.T01:intron 30.0%
TTCCACCATCTGATAAAATT+GGG - Chr4:84320004-84320023 MsG0480023373.01.T01:intron 30.0%
TTCTTCTACCAAAAAGGAAA+AGG + Chr4:84322438-84322457 None:intergenic 30.0%
TTGTTTGTTTAATATCCTGC+AGG - Chr4:84321971-84321990 MsG0480023373.01.T01:intron 30.0%
TTTAAGCTTCCAATTATGCA+TGG - Chr4:84319650-84319669 MsG0480023373.01.T01:intron 30.0%
TTTCCACCATCTGATAAAAT+TGG - Chr4:84320003-84320022 MsG0480023373.01.T01:intron 30.0%
! ACCCAAAGGAAAAATAGTTT+TGG - Chr4:84319726-84319745 MsG0480023373.01.T01:intron 30.0%
! CTTTCTTTAGGAATTTGTCA+GGG - Chr4:84322139-84322158 MsG0480023373.01.T01:CDS 30.0%
! TAACCTTCTTTTTCTCTTGT+AGG - Chr4:84322257-84322276 MsG0480023373.01.T01:intron 30.0%
! TCCATTTTCATTTGCTTCAT+AGG + Chr4:84320066-84320085 None:intergenic 30.0%
! TCCCTTTTAGACAATTACAT+AGG + Chr4:84322869-84322888 None:intergenic 30.0%
! TCTTTCTTTAGGAATTTGTC+AGG - Chr4:84322138-84322157 MsG0480023373.01.T01:CDS 30.0%
!! AAAACTATTTTTCCTTTGGG+TGG + Chr4:84319727-84319746 None:intergenic 30.0%
!! AAACTATTTTTCCTTTGGGT+GGG + Chr4:84319726-84319745 None:intergenic 30.0%
!! AGAAAAAGATAGGGTTTTGA+AGG + Chr4:84318452-84318471 None:intergenic 30.0%
!! TAAATCATAATTACCGGCTT+TGG + Chr4:84321433-84321452 None:intergenic 30.0%
!! TCTTCTTATCGATTTGAATC+CGG - Chr4:84318405-84318424 MsG0480023373.01.T01:three_prime_UTR 30.0%
!! TGACTTTGAAGTAACAAGTT+AGG - Chr4:84322097-84322116 MsG0480023373.01.T01:intron 30.0%
!! TTCACAAATTTGCTACATCA+AGG + Chr4:84321111-84321130 None:intergenic 30.0%
!!! AAAAAGATAGGGTTTTGAAG+GGG + Chr4:84318450-84318469 None:intergenic 30.0%
!!! ATAGCCATTTTTCTGAATCT+TGG - Chr4:84321690-84321709 MsG0480023373.01.T01:intron 30.0%
!!! ATTTTATCAGATGGTGGAAA+AGG + Chr4:84320003-84320022 None:intergenic 30.0%
!!! GAAAAAGATAGGGTTTTGAA+GGG + Chr4:84318451-84318470 None:intergenic 30.0%
!!! GTTGTTGATTTCAATTTTGC+AGG - Chr4:84318997-84319016 MsG0480023373.01.T01:intron 30.0%
!!! TAATGATAGTTTTTGGGTAC+AGG + Chr4:84320429-84320448 None:intergenic 30.0%
!!! TTCATTTTTAGCTGTTCCTT+TGG - Chr4:84320141-84320160 MsG0480023373.01.T01:intron 30.0%
AAACCTTCTTTCCATACAAG+AGG + Chr4:84319339-84319358 None:intergenic 35.0%
AAATGGCTGATAGAAATCTG+TGG + Chr4:84321356-84321375 None:intergenic 35.0%
AACCATAAACTACTTACGCT+CGG + Chr4:84319377-84319396 None:intergenic 35.0%
AAGTCTACACCAGATAAACA+AGG + Chr4:84319820-84319839 None:intergenic 35.0%
AATTTGTCAGGGAAAAGGTT+CGG - Chr4:84322150-84322169 MsG0480023373.01.T01:intron 35.0%
ACATTTGGAAGTGGAACATA+TGG - Chr4:84320847-84320866 MsG0480023373.01.T01:intron 35.0%
ACTTCCAAATGTTACTCTGA+AGG + Chr4:84320839-84320858 None:intergenic 35.0%
AGATAAATATGACCAGATCG+GGG + Chr4:84319450-84319469 None:intergenic 35.0%
AGGAAGTTGAGAGATTACTA+AGG + Chr4:84320207-84320226 None:intergenic 35.0%
AGGTCTTCTGTGAATTTGAT+TGG - Chr4:84321562-84321581 MsG0480023373.01.T01:intron 35.0%
ATCAGCTCATCAAAGTTGAA+AGG + Chr4:84319916-84319935 None:intergenic 35.0%
ATGCTGTGTATCAAATCAAG+TGG - Chr4:84319161-84319180 MsG0480023373.01.T01:CDS 35.0%
CATAAACAGGTATTACGGAA+AGG - Chr4:84322721-84322740 MsG0480023373.01.T01:intron 35.0%
CCAAAGACTATCAATCGTAA+CGG + Chr4:84321464-84321483 None:intergenic 35.0%
CCGTAATACCTGTTTATGAA+TGG + Chr4:84322719-84322738 None:intergenic 35.0%
CGTACTGGAGAGTAAAAATA+GGG + Chr4:84320679-84320698 None:intergenic 35.0%
CTAAAGCCCAAAAACTTACA+GGG + Chr4:84321228-84321247 None:intergenic 35.0%
CTTCAGCATTAAAAGCTACA+CGG + Chr4:84318816-84318835 None:intergenic 35.0%
CTTCGAAGATAAGCGTAATT+TGG - Chr4:84318664-84318683 MsG0480023373.01.T01:three_prime_UTR 35.0%
GAAAAGTGAAAATGCCTCTT+AGG + Chr4:84320642-84320661 None:intergenic 35.0%
GACACGCTCTTACATTTAAA+AGG + Chr4:84318385-84318404 None:intergenic 35.0%
GGAAAGAAGGTTTACCTATT+TGG - Chr4:84319346-84319365 MsG0480023373.01.T01:intron 35.0%
GGCTCAACTGGATATATTAT+CGG + Chr4:84321412-84321431 None:intergenic 35.0%
GGTCTTCTGTGAATTTGATT+GGG - Chr4:84321563-84321582 MsG0480023373.01.T01:intron 35.0%
GTCATCAACGAAAATCTAAG+CGG + Chr4:84319218-84319237 None:intergenic 35.0%
GTGATCAGAGGAAACATATT+TGG + Chr4:84319677-84319696 None:intergenic 35.0%
GTTTCCTTCAGAGTAACATT+TGG - Chr4:84320832-84320851 MsG0480023373.01.T01:intron 35.0%
GTTTGTATTTATCTCCTTGC+CGG - Chr4:84319793-84319812 MsG0480023373.01.T01:intron 35.0%
TACTGCTATGATGATAGGTA+TGG - Chr4:84320484-84320503 MsG0480023373.01.T01:intron 35.0%
TATCAGGAAGGTTTAACAAC+AGG + Chr4:84321624-84321643 None:intergenic 35.0%
TGAAGCAAATGAAAATGGAC+TGG - Chr4:84320067-84320086 MsG0480023373.01.T01:CDS 35.0%
TGATACAACCTGTTACAGAA+AGG + Chr4:84319980-84319999 None:intergenic 35.0%
TGCATCATGAATTGAAACCA+TGG + Chr4:84320762-84320781 None:intergenic 35.0%
TTAGGAATTTGTCAGGGAAA+AGG - Chr4:84322145-84322164 MsG0480023373.01.T01:CDS 35.0%
TTCAGAGTAACATTTGGAAG+TGG - Chr4:84320838-84320857 MsG0480023373.01.T01:intron 35.0%
TTGCCTACAAGAGAAAAAGA+AGG + Chr4:84322263-84322282 None:intergenic 35.0%
TTGCTATGTTACTGAGTTCT+AGG - Chr4:84321790-84321809 MsG0480023373.01.T01:intron 35.0%
TTGGGAATTAGATGAACTTG+AGG - Chr4:84321581-84321600 MsG0480023373.01.T01:intron 35.0%
TTGTTTATCTGGTGTAGACT+TGG - Chr4:84319819-84319838 MsG0480023373.01.T01:intron 35.0%
TTTCAACTCCTTTCTGTAAC+AGG - Chr4:84319969-84319988 MsG0480023373.01.T01:intron 35.0%
TTTCAGAATGCATTCGAAGA+GGG - Chr4:84319310-84319329 MsG0480023373.01.T01:CDS 35.0%
TTTGATACACAGCATCCAAT+TGG + Chr4:84319156-84319175 None:intergenic 35.0%
! AAATTTTGTATGAGGCATGC+TGG - Chr4:84321271-84321290 MsG0480023373.01.T01:intron 35.0%
! AACTGTGACCTTTTCCTTTT+TGG - Chr4:84322427-84322446 MsG0480023373.01.T01:CDS 35.0%
! ATCCCAATTTTATCAGATGG+TGG + Chr4:84320009-84320028 None:intergenic 35.0%
! ATCTTCGAAGTATTCAGGTT+CGG + Chr4:84318654-84318673 None:intergenic 35.0%
! CAATTTTGCAGGAAGATTTG+TGG - Chr4:84319008-84319027 MsG0480023373.01.T01:intron 35.0%
! CGTTACGATTGATAGTCTTT+GGG - Chr4:84321462-84321481 MsG0480023373.01.T01:CDS 35.0%
! GAAGCAAATGAAAATGGACT+GGG - Chr4:84320068-84320087 MsG0480023373.01.T01:CDS 35.0%
! GACAACAATTGCAATTTTCC+TGG - Chr4:84322771-84322790 MsG0480023373.01.T01:intron 35.0%
! TCTAAAGCCCAAAAACTTAC+AGG + Chr4:84321229-84321248 None:intergenic 35.0%
! TCTTTTTCTCTTGTAGGCAA+GGG - Chr4:84322263-84322282 MsG0480023373.01.T01:intron 35.0%
! TTCTTTTTCTCTTGTAGGCA+AGG - Chr4:84322262-84322281 MsG0480023373.01.T01:intron 35.0%
!! AACTATTTTTCCTTTGGGTG+GGG + Chr4:84319725-84319744 None:intergenic 35.0%
!! AGGTGTTAAGGTTGGTATTT+GGG - Chr4:84322398-84322417 MsG0480023373.01.T01:intron 35.0%
!! CTTTTGGTGATTTGTGATCT+TGG - Chr4:84322200-84322219 MsG0480023373.01.T01:intron 35.0%
!! GAAAGCATTTCCATTTACCA+TGG - Chr4:84320742-84320761 MsG0480023373.01.T01:intron 35.0%
!! TGATAGTCTTTGGGTTGTTT+GGG - Chr4:84321471-84321490 MsG0480023373.01.T01:CDS 35.0%
!! TTGATAGTCTTTGGGTTGTT+TGG - Chr4:84321470-84321489 MsG0480023373.01.T01:CDS 35.0%
!!! TTACCTTGAAGGCATCTTTT+TGG + Chr4:84322040-84322059 None:intergenic 35.0%
!!! TTTTTGTTGTTAGCATGCAC+AGG - Chr4:84321055-84321074 MsG0480023373.01.T01:intron 35.0%
AAATGCCTCTTAGGAAGAAC+AGG + Chr4:84320633-84320652 None:intergenic 40.0%
AACACCATCACAATGAGGAA+AGG - Chr4:84318512-84318531 MsG0480023373.01.T01:three_prime_UTR 40.0%
ACCACCTACTTCACTTATCT+AGG + Chr4:84322921-84322940 None:intergenic 40.0%
AGACCAAAAAGATGCCTTCA+AGG - Chr4:84322034-84322053 MsG0480023373.01.T01:intron 40.0%
AGATGGACATATCCATATCC+AGG - Chr4:84322567-84322586 MsG0480023373.01.T01:intron 40.0%
AGCAAAGAAAGCCAATAGAG+AGG - Chr4:84322175-84322194 MsG0480023373.01.T01:intron 40.0%
ATAAATATGACCAGATCGGG+GGG + Chr4:84319448-84319467 None:intergenic 40.0%
ATGGTGTTTGCGTTCGAATT+CGG + Chr4:84318500-84318519 None:intergenic 40.0%
ATTTGTCAGGGAAAAGGTTC+GGG - Chr4:84322151-84322170 MsG0480023373.01.T01:intron 40.0%
CATTGCTTGATCCACTAAAC+TGG - Chr4:84319699-84319718 MsG0480023373.01.T01:intron 40.0%
CTAGTAGAAGGACATGTAAG+AGG + Chr4:84321889-84321908 None:intergenic 40.0%
GAAAACCTGTTCTTCCTAAG+AGG - Chr4:84320625-84320644 MsG0480023373.01.T01:intron 40.0%
GAACTCAGTAACATAGCAAC+AGG + Chr4:84321789-84321808 None:intergenic 40.0%
GAGACTTCAGTCTATCAACT+TGG + Chr4:84320259-84320278 None:intergenic 40.0%
GATAAATATGACCAGATCGG+GGG + Chr4:84319449-84319468 None:intergenic 40.0%
GATGGACATATCCATATCCA+GGG - Chr4:84322568-84322587 MsG0480023373.01.T01:intron 40.0%
GATTAACTCAGTTCAGAGAG+AGG - Chr4:84320026-84320045 MsG0480023373.01.T01:intron 40.0%
GCGTACTGGAGAGTAAAAAT+AGG + Chr4:84320680-84320699 None:intergenic 40.0%
GCTATTTAACAAGTGCGTAC+TGG + Chr4:84320694-84320713 None:intergenic 40.0%
GGATAATTGAGACGTGTTTC+TGG - Chr4:84322943-84322962 MsG0480023373.01.T01:exon 40.0%
GTAATATCAGTGGGACCAAT+TGG - Chr4:84319138-84319157 MsG0480023373.01.T01:CDS 40.0%
GTTTATCAGTAAACTCCTGC+AGG + Chr4:84321989-84322008 None:intergenic 40.0%
GTTTCAGAATGCATTCGAAG+AGG - Chr4:84319309-84319328 MsG0480023373.01.T01:CDS 40.0%
TACACCAGATAAACAAGGTC+CGG + Chr4:84319815-84319834 None:intergenic 40.0%
TCCTAGATAAGTGAAGTAGG+TGG - Chr4:84322917-84322936 MsG0480023373.01.T01:CDS 40.0%
TGAATTTGAACAAAGCACGG+AGG - Chr4:84321384-84321403 MsG0480023373.01.T01:CDS 40.0%
TGCAGTCTCCATTCATAAAC+AGG - Chr4:84322708-84322727 MsG0480023373.01.T01:intron 40.0%
TGGCTATTATAAGCGGTAGA+AGG + Chr4:84321677-84321696 None:intergenic 40.0%
TTTGCTACATCAAGGACAAC+AGG + Chr4:84321103-84321122 None:intergenic 40.0%
! AAATTTGATGGAGCACCAAG+AGG + Chr4:84322840-84322859 None:intergenic 40.0%
! AAGTATTCAGGTTCGGATTG+GGG + Chr4:84318647-84318666 None:intergenic 40.0%
! ACTTATGCATTGCTTGTTGC+AGG - Chr4:84321542-84321561 MsG0480023373.01.T01:intron 40.0%
! ATTGGGGTTTAGAGGTTTTG+AGG + Chr4:84318631-84318650 None:intergenic 40.0%
! CCGTTACGATTGATAGTCTT+TGG - Chr4:84321461-84321480 MsG0480023373.01.T01:CDS 40.0%
! CGCTTATCTTCGAAGTATTC+AGG + Chr4:84318659-84318678 None:intergenic 40.0%
! GAAGTATTCAGGTTCGGATT+GGG + Chr4:84318648-84318667 None:intergenic 40.0%
! GGTTTCATCATTTTGCGAGT+TGG - Chr4:84319393-84319412 MsG0480023373.01.T01:intron 40.0%
! TGCTTGCCCTGTAAGTTTTT+GGG - Chr4:84321219-84321238 MsG0480023373.01.T01:intron 40.0%
! TTTTCTTGAGACGAAGCAAC+AGG + Chr4:84318575-84318594 None:intergenic 40.0%
!! CACCAAAAGTACCTCTCTAT+TGG + Chr4:84322189-84322208 None:intergenic 40.0%
!! CAGGTGTTAAGGTTGGTATT+TGG - Chr4:84322397-84322416 MsG0480023373.01.T01:intron 40.0%
!! GAATCTTGGTGTTATTCTGC+AGG - Chr4:84321704-84321723 MsG0480023373.01.T01:intron 40.0%
!! GGCTTTAGAATGTTACTCAC+AGG - Chr4:84321240-84321259 MsG0480023373.01.T01:intron 40.0%
!! TGCTTTGAAACACCTGAAGT+TGG - Chr4:84321173-84321192 MsG0480023373.01.T01:intron 40.0%
!!! AGCCAATAGAGAGGTACTTT+TGG - Chr4:84322184-84322203 MsG0480023373.01.T01:intron 40.0%
!!! GTTTTGAGGCGTTTAGCTTT+AGG + Chr4:84318617-84318636 None:intergenic 40.0%
!!! TGATAGTTTTTGGGTACAGG+CGG + Chr4:84320426-84320445 None:intergenic 40.0%
AAATACGGGCAAAACAAGCC+AGG + Chr4:84322792-84322811 None:intergenic 45.0%
AACAAACCTCAGTGCCAACA+GGG + Chr4:84319045-84319064 None:intergenic 45.0%
AACGCGTCTTCATGATACAC+AGG + Chr4:84319588-84319607 None:intergenic 45.0%
ACCTGATGTGTCAGGTGTTA+AGG - Chr4:84322386-84322405 MsG0480023373.01.T01:intron 45.0%
ACCTTAACACCTGACACATC+AGG + Chr4:84322390-84322409 None:intergenic 45.0%
ACGCAAACACCATCACAATG+AGG - Chr4:84318507-84318526 MsG0480023373.01.T01:three_prime_UTR 45.0%
ACTTATTGAGGGGGAAGAGT+TGG - Chr4:84322007-84322026 MsG0480023373.01.T01:intron 45.0%
AGCACCTTTCCTCATTGTGA+TGG + Chr4:84318519-84318538 None:intergenic 45.0%
AGCCATTGCTGAAATGAGTG+CGG - Chr4:84322299-84322318 MsG0480023373.01.T01:CDS 45.0%
ATATCCAGTTGAGCCAAAGC+CGG - Chr4:84321417-84321436 MsG0480023373.01.T01:CDS 45.0%
CACCGAGCGTAAGTAGTTTA+TGG - Chr4:84319372-84319391 MsG0480023373.01.T01:intron 45.0%
CGGCCTTAATACTCACTTCT+AGG + Chr4:84319198-84319217 None:intergenic 45.0%
CTCAACTGGTCATGCATCAA+GGG - Chr4:84319505-84319524 MsG0480023373.01.T01:intron 45.0%
CTGCATACCTGTTGTTGTAG+CGG - Chr4:84319542-84319561 MsG0480023373.01.T01:intron 45.0%
GATAAGTGAAGTAGGTGGTG+AGG - Chr4:84322922-84322941 MsG0480023373.01.T01:CDS 45.0%
GATGTGTCAGGTGTTAAGGT+TGG - Chr4:84322390-84322409 MsG0480023373.01.T01:intron 45.0%
GTATTACGGAAAGGCTCATG+AGG - Chr4:84322730-84322749 MsG0480023373.01.T01:intron 45.0%
TAAATATGACCAGATCGGGG+GGG + Chr4:84319447-84319466 None:intergenic 45.0%
TCAACTGGTCATGCATCAAG+GGG - Chr4:84319506-84319525 MsG0480023373.01.T01:intron 45.0%
TCAAGCAATGTCGTGATCAG+AGG + Chr4:84319689-84319708 None:intergenic 45.0%
TCAGTAACATAGCAACAGGC+AGG + Chr4:84321785-84321804 None:intergenic 45.0%
TGGCCTCTTGTATGGAAAGA+AGG - Chr4:84319333-84319352 MsG0480023373.01.T01:intron 45.0%
TTCCGCACTCATTTCAGCAA+TGG + Chr4:84322304-84322323 None:intergenic 45.0%
TTGAGACGAAGCAACAGGTT+GGG + Chr4:84318570-84318589 None:intergenic 45.0%
! AGCAACAGGTTGGGAATCTT+CGG + Chr4:84318561-84318580 None:intergenic 45.0%
! CGAAGTATTCAGGTTCGGAT+TGG + Chr4:84318649-84318668 None:intergenic 45.0%
! CTGCTTGCCCTGTAAGTTTT+TGG - Chr4:84321218-84321237 MsG0480023373.01.T01:intron 45.0%
!! CAGGCAACTAATTTGCTTGG+TGG - Chr4:84319417-84319436 MsG0480023373.01.T01:intron 45.0%
!! GAGGCGTTTAGCTTTAGGTT+TGG + Chr4:84318612-84318631 None:intergenic 45.0%
!! GGTCAGGCAACTAATTTGCT+TGG - Chr4:84319414-84319433 MsG0480023373.01.T01:intron 45.0%
!!! CATCATTTTGCGAGTTGGTC+AGG - Chr4:84319398-84319417 MsG0480023373.01.T01:intron 45.0%
!!! GATAGTTTTTGGGTACAGGC+GGG + Chr4:84320425-84320444 None:intergenic 45.0%
!!! GTTTTGAAGGGGTGAATCGA+AGG + Chr4:84318439-84318458 None:intergenic 45.0%
!! TATATTTATATATAAAATCA+AGG + Chr4:84318362-84318381 None:intergenic 5.0%
!! TTTGTTTATTAATATTATTA+AGG - Chr4:84318874-84318893 MsG0480023373.01.T01:intron 5.0%
AACATTCCCTGTTGGCACTG+AGG - Chr4:84319036-84319055 MsG0480023373.01.T01:intron 50.0%
AAGTTTACCCGGCAACCTCT+TGG - Chr4:84322822-84322841 MsG0480023373.01.T01:CDS 50.0%
ACCTGACACATCAGGTGCAT+CGG + Chr4:84322382-84322401 None:intergenic 50.0%
CAACAAACCTCAGTGCCAAC+AGG + Chr4:84319046-84319065 None:intergenic 50.0%
CAGAATGCATTCGAAGAGGG+TGG - Chr4:84319313-84319332 MsG0480023373.01.T01:CDS 50.0%
CAGATAAACAAGGTCCGGCA+AGG + Chr4:84319810-84319829 None:intergenic 50.0%
CTTGAGACGAAGCAACAGGT+TGG + Chr4:84318571-84318590 None:intergenic 50.0%
GACATATCCATATCCAGGGC+AGG - Chr4:84322572-84322591 MsG0480023373.01.T01:intron 50.0%
GAGCTTACCGCTACAACAAC+AGG + Chr4:84319552-84319571 None:intergenic 50.0%
GCTCAACTGGTCATGCATCA+AGG - Chr4:84319504-84319523 MsG0480023373.01.T01:intron 50.0%
GTTGAGCTGCAAACGACAAC+AGG + Chr4:84319491-84319510 None:intergenic 50.0%
TAGCGGTAAGCTCTCACACT+GGG - Chr4:84319559-84319578 MsG0480023373.01.T01:intron 50.0%
TCTTGCGTTGCACCCAAAGA+AGG - Chr4:84320288-84320307 MsG0480023373.01.T01:CDS 50.0%
TCTTGTAGGCAAGGGAAGCA+CGG - Chr4:84322271-84322290 MsG0480023373.01.T01:intron 50.0%
TGGCTCGAAACATTCCCTGT+TGG - Chr4:84319028-84319047 MsG0480023373.01.T01:intron 50.0%
TTTGGGTACAGGCGGGAAAA+GGG + Chr4:84320418-84320437 None:intergenic 50.0%
! AGGTTCGGATTGGGGTTTAG+AGG + Chr4:84318639-84318658 None:intergenic 50.0%
! CTTGCCGGACCTTGTTTATC+TGG - Chr4:84319808-84319827 MsG0480023373.01.T01:intron 50.0%
! GTTGTCGTTTGCAGCTCAAC+TGG - Chr4:84319491-84319510 MsG0480023373.01.T01:intron 50.0%
! TTGGGAATCTTCGGTGTGCT+TGG + Chr4:84318552-84318571 None:intergenic 50.0%
!! ATTACCGGCTTTGGCTCAAC+TGG + Chr4:84321424-84321443 None:intergenic 50.0%
!! TACGCTCGGTGCAACCAAAT+AGG + Chr4:84319363-84319382 None:intergenic 50.0%
!! TGAATCGAAGGCGCTAGATC+CGG + Chr4:84318427-84318446 None:intergenic 50.0%
!! TTTTGGGTACAGGCGGGAAA+AGG + Chr4:84320419-84320438 None:intergenic 50.0%
ACATCAGGTGCATCGGGAGA+TGG + Chr4:84322375-84322394 None:intergenic 55.0%
ACTAAACTGGCCCCACCCAA+AGG - Chr4:84319712-84319731 MsG0480023373.01.T01:intron 55.0%
AGGTGCATCGGGAGATGGAA+CGG + Chr4:84322370-84322389 None:intergenic 55.0%
CCTGACACATCAGGTGCATC+GGG + Chr4:84322381-84322400 None:intergenic 55.0%
CGCTGCTCCAGAGGAATGTA+CGG + Chr4:84320096-84320115 None:intergenic 55.0%
CTGGGTTCCGTACATTCCTC+TGG - Chr4:84320086-84320105 MsG0480023373.01.T01:CDS 55.0%
GAAGAGGGTGGCCTCTTGTA+TGG - Chr4:84319325-84319344 MsG0480023373.01.T01:intron 55.0%
GTAGCGGTAAGCTCTCACAC+TGG - Chr4:84319558-84319577 MsG0480023373.01.T01:intron 55.0%
TTTGGGTGGGGCCAGTTTAG+TGG + Chr4:84319713-84319732 None:intergenic 55.0%
! ATGGAGCACCAAGAGGTTGC+CGG + Chr4:84322833-84322852 None:intergenic 55.0%
!! CGTACATTCCTCTGGAGCAG+CGG - Chr4:84320094-84320113 MsG0480023373.01.T01:CDS 55.0%
CATCATCGGTCATCCTGCCC+TGG + Chr4:84322588-84322607 None:intergenic 60.0%
CCCGATGCACCTGATGTGTC+AGG - Chr4:84322378-84322397 MsG0480023373.01.T01:intron 60.0%
CGGTCATCCTGCCCTGGATA+TGG + Chr4:84322582-84322601 None:intergenic 60.0%
GATGCATACCGCTGCTCCAG+AGG + Chr4:84320105-84320124 None:intergenic 60.0%
GGTGCATCGGGAGATGGAAC+GGG + Chr4:84322369-84322388 None:intergenic 60.0%
TATGACCAGATCGGGGGGGT+TGG + Chr4:84319443-84319462 None:intergenic 60.0%
! TGGAGCACCAAGAGGTTGCC+GGG + Chr4:84322832-84322851 None:intergenic 60.0%
GGTGGCCAACCCCCCCGATC+TGG - Chr4:84319435-84319454 MsG0480023373.01.T01:CDS 75.0%
Chromosome Type Strat End Strand Name
Chr4 gene 84318358 84323126 84318358 ID=MsG0480023373.01;Name=MsG0480023373.01
Chr4 mRNA 84318358 84323126 84318358 ID=MsG0480023373.01.T01;Parent=MsG0480023373.01;Name=MsG0480023373.01.T01;_AED=0.49;_eAED=0.49;_QI=166|1|1|1|0.76|0.78|14|366|342
Chr4 exon 84318358 84318771 84318358 ID=MsG0480023373.01.T01:exon:5669;Parent=MsG0480023373.01.T01
Chr4 exon 84319077 84319205 84319077 ID=MsG0480023373.01.T01:exon:5668;Parent=MsG0480023373.01.T01
Chr4 exon 84319288 84319335 84319288 ID=MsG0480023373.01.T01:exon:5667;Parent=MsG0480023373.01.T01
Chr4 exon 84319429 84319491 84319429 ID=MsG0480023373.01.T01:exon:5666;Parent=MsG0480023373.01.T01
Chr4 exon 84319882 84319920 84319882 ID=MsG0480023373.01.T01:exon:5665;Parent=MsG0480023373.01.T01
Chr4 exon 84320046 84320125 84320046 ID=MsG0480023373.01.T01:exon:5664;Parent=MsG0480023373.01.T01
Chr4 exon 84320256 84320314 84320256 ID=MsG0480023373.01.T01:exon:5663;Parent=MsG0480023373.01.T01
Chr4 exon 84321175 84321234 84321175 ID=MsG0480023373.01.T01:exon:5662;Parent=MsG0480023373.01.T01
Chr4 exon 84321369 84321493 84321369 ID=MsG0480023373.01.T01:exon:5661;Parent=MsG0480023373.01.T01
Chr4 exon 84321921 84321979 84321921 ID=MsG0480023373.01.T01:exon:5660;Parent=MsG0480023373.01.T01
Chr4 exon 84322105 84322168 84322105 ID=MsG0480023373.01.T01:exon:5659;Parent=MsG0480023373.01.T01
Chr4 exon 84322283 84322336 84322283 ID=MsG0480023373.01.T01:exon:5658;Parent=MsG0480023373.01.T01
Chr4 exon 84322427 84322465 84322427 ID=MsG0480023373.01.T01:exon:5657;Parent=MsG0480023373.01.T01
Chr4 exon 84322799 84323126 84322799 ID=MsG0480023373.01.T01:exon:5656;Parent=MsG0480023373.01.T01
Chr4 five_prime_UTR 84322961 84323126 84322961 ID=MsG0480023373.01.T01:five_prime_utr;Parent=MsG0480023373.01.T01
Chr4 CDS 84322799 84322960 84322799 ID=MsG0480023373.01.T01:cds;Parent=MsG0480023373.01.T01
Chr4 CDS 84322427 84322465 84322427 ID=MsG0480023373.01.T01:cds;Parent=MsG0480023373.01.T01
Chr4 CDS 84322283 84322336 84322283 ID=MsG0480023373.01.T01:cds;Parent=MsG0480023373.01.T01
Chr4 CDS 84322105 84322168 84322105 ID=MsG0480023373.01.T01:cds;Parent=MsG0480023373.01.T01
Chr4 CDS 84321921 84321979 84321921 ID=MsG0480023373.01.T01:cds;Parent=MsG0480023373.01.T01
Chr4 CDS 84321369 84321493 84321369 ID=MsG0480023373.01.T01:cds;Parent=MsG0480023373.01.T01
Chr4 CDS 84321175 84321234 84321175 ID=MsG0480023373.01.T01:cds;Parent=MsG0480023373.01.T01
Chr4 CDS 84320256 84320314 84320256 ID=MsG0480023373.01.T01:cds;Parent=MsG0480023373.01.T01
Chr4 CDS 84320046 84320125 84320046 ID=MsG0480023373.01.T01:cds;Parent=MsG0480023373.01.T01
Chr4 CDS 84319882 84319920 84319882 ID=MsG0480023373.01.T01:cds;Parent=MsG0480023373.01.T01
Chr4 CDS 84319429 84319491 84319429 ID=MsG0480023373.01.T01:cds;Parent=MsG0480023373.01.T01
Chr4 CDS 84319288 84319335 84319288 ID=MsG0480023373.01.T01:cds;Parent=MsG0480023373.01.T01
Chr4 CDS 84319077 84319205 84319077 ID=MsG0480023373.01.T01:cds;Parent=MsG0480023373.01.T01
Chr4 CDS 84318724 84318771 84318724 ID=MsG0480023373.01.T01:cds;Parent=MsG0480023373.01.T01
Chr4 three_prime_UTR 84318358 84318723 84318358 ID=MsG0480023373.01.T01:three_prime_utr;Parent=MsG0480023373.01.T01
Gene Sequence

>MsG0480023373.01.T01

ATGAGGAAAGGTGCTAAGAGAAAGACCAAGCACACCGAAGATTCCCAACCTGTTGCTTCGTCTCAAGAAAACGAAAACAAAATCACCAAACCTAAAGCTAAACGCCTCAAAACCTCTAAACCCCAATCCGAACCTGAATACTTCGAAGATAAGCGTAATTTGGAAGATTTGTGGCTCGAAACATTCCCTGTTGGCACTGAGTGGGACCAATTGGATGCTGTGTATCAAATCAAGTGGAATTTCTCTAACCTAGAAAATGCATTCGAAGAGGGTGGCCTCTTGTATGGAAAGAAGGTTTACCTATTTGGTTGCACCGAGCCTCAACTGGTCATGCATCAAGGGGAAAACAAAGTTGTCTGCATACCTGTTGTTGTAGCGGTTGTATCACCTTTTCCACCATCTGATAAAATTGGGATTAACTCAGTTCAGAGAGAGGCTGAAGAGATAATTCCTATGAAGCAAATGAAAATGGACTGGGTTCCGTACATTCCTCTGGAGCAGCGAGATAGCCAAGTTGATAGACTGAAGTCTCAAATATTCATCTTGCGTTGCACCCAAAGAAGGTCTGCTTTGAAACACCTGAAGTTGGATAGATTAAAGAAATATGAGTACTGCTTGCCCTATTTCTATCAGCCATTTAAGGAAGATGAATTTGAACAAAGCACGGAGGTTCCGATAATATATCCAGTTGAGCCAAAGCCGGTCTTCTGTGAATTTGATTGGGAATTAGATGAACTTGAGGAGTTTACTGATAAACTTATTGAGGGGGAAGAGTTGGCAGAAGACCAAAAAGATGCCTTCAAGGAATTTGTCAGGGAAAAGGTTCGGGAAGCAAAGAAAGCCAATAGAGAGGCAAGGGAAGCACGGAAAAAAGCCATTGCTGAAATGAGTGCGGAAACTAAAGCTGCATTTGATACAATGAGATTTTATAAGTTCTATCCCGTTCCATCTCCCGATGCACCTGATGTGTCAGGTGTTAAGTCTCCATTCATAAACAGGTATTACGGAAAGGCTCATGAGGTTCTTTGA
Protein sequence

>MsG0480023373.01.T01

MRKGAKRKTKHTEDSQPVASSQENENKITKPKAKRLKTSKPQSEPEYFEDKRNLEDLWLETFPVGTEWDQLDAVYQIKWNFSNLENAFEEGGLLYGKKVYLFGCTEPQLVMHQGENKVVCIPVVVAVVSPFPPSDKIGINSVQREAEEIIPMKQMKMDWVPYIPLEQRDSQVDRLKSQIFILRCTQRRSALKHLKLDRLKKYEYCLPYFYQPFKEDEFEQSTEVPIIYPVEPKPVFCEFDWELDELEEFTDKLIEGEELAEDQKDAFKEFVREKVREAKKANREAREARKKAIAEMSAETKAAFDTMRFYKFYPVPSPDAPDVSGVKSPFINRYYGKAHEVL*