Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480023963.01.T01 | XP_003630990.1 | 89.389 | 311 | 11 | 1 | 1 | 289 | 1 | 311 | 0 | 551 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480023963.01.T01 | Q9LFD5 | 49.569 | 232 | 91 | 3 | 29 | 238 | 3 | 230 | 1.05E-63 | 204 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480023963.01.T01 | G7LBH9 | 89.389 | 311 | 11 | 1 | 1 | 289 | 1 | 311 | 0.0 | 551 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0480023963.01 | MsG0780036236.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480023963.01.T01 | MTR_8g105910 | 89.389 | 311 | 11 | 1 | 1 | 289 | 1 | 311 | 0.0 | 551 |
| MsG0480023963.01.T01 | MTR_1g032860 | 61.238 | 307 | 95 | 3 | 1 | 285 | 1 | 305 | 1.16e-123 | 355 |
| MsG0480023963.01.T01 | MTR_8g066460 | 47.407 | 270 | 110 | 3 | 31 | 268 | 3 | 272 | 1.09e-75 | 233 |
| MsG0480023963.01.T01 | MTR_8g066460 | 47.407 | 270 | 110 | 3 | 31 | 268 | 19 | 288 | 2.48e-75 | 232 |
| MsG0480023963.01.T01 | MTR_5g029640 | 52.049 | 244 | 91 | 2 | 31 | 248 | 3 | 246 | 4.03e-73 | 232 |
| MsG0480023963.01.T01 | MTR_5g029640 | 48.571 | 140 | 50 | 1 | 131 | 248 | 279 | 418 | 2.77e-30 | 119 |
| MsG0480023963.01.T01 | MTR_7g086080 | 37.751 | 249 | 115 | 3 | 32 | 240 | 4 | 252 | 5.19e-52 | 171 |
| MsG0480023963.01.T01 | MTR_5g039130 | 37.500 | 240 | 113 | 4 | 27 | 229 | 3 | 242 | 2.66e-40 | 140 |
| MsG0480023963.01.T01 | MTR_7g010100 | 31.276 | 243 | 121 | 7 | 33 | 229 | 7 | 249 | 2.42e-26 | 104 |
| MsG0480023963.01.T01 | MTR_5g038107 | 63.333 | 60 | 22 | 0 | 31 | 90 | 3 | 62 | 1.54e-19 | 82.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480023963.01.T01 | AT1G67950 | 52.675 | 243 | 86 | 2 | 28 | 248 | 25 | 260 | 2.68e-80 | 244 |
| MsG0480023963.01.T01 | AT1G67950 | 52.675 | 243 | 86 | 2 | 28 | 248 | 26 | 261 | 4.00e-80 | 244 |
| MsG0480023963.01.T01 | AT1G67950 | 52.869 | 244 | 85 | 3 | 28 | 248 | 25 | 261 | 4.38e-79 | 241 |
| MsG0480023963.01.T01 | AT4G17720 | 51.111 | 270 | 96 | 6 | 33 | 273 | 5 | 267 | 2.59e-78 | 240 |
| MsG0480023963.01.T01 | AT5G46870 | 51.250 | 240 | 85 | 2 | 33 | 240 | 5 | 244 | 4.67e-72 | 224 |
| MsG0480023963.01.T01 | AT5G46870 | 51.250 | 240 | 85 | 2 | 33 | 240 | 5 | 244 | 4.67e-72 | 224 |
| MsG0480023963.01.T01 | AT5G16840 | 49.569 | 232 | 92 | 3 | 29 | 238 | 3 | 231 | 2.91e-65 | 205 |
| MsG0480023963.01.T01 | AT5G16840 | 49.569 | 232 | 91 | 3 | 29 | 238 | 3 | 230 | 1.07e-64 | 204 |
| MsG0480023963.01.T01 | AT5G16840 | 49.565 | 230 | 90 | 3 | 31 | 238 | 3 | 228 | 3.98e-64 | 202 |
| MsG0480023963.01.T01 | AT1G67950 | 49.038 | 208 | 77 | 2 | 63 | 248 | 1 | 201 | 4.85e-59 | 188 |
| MsG0480023963.01.T01 | AT5G32450 | 40.400 | 250 | 108 | 3 | 32 | 240 | 5 | 254 | 2.06e-55 | 180 |
| MsG0480023963.01.T01 | AT1G14340 | 34.632 | 231 | 118 | 4 | 34 | 231 | 9 | 239 | 5.40e-36 | 129 |
| MsG0480023963.01.T01 | AT3G01210 | 31.416 | 226 | 113 | 5 | 35 | 219 | 9 | 233 | 1.98e-22 | 94.0 |
| MsG0480023963.01.T01 | AT3G01210 | 31.416 | 226 | 113 | 5 | 35 | 219 | 9 | 233 | 1.98e-22 | 94.0 |
Find 58 sgRNAs with CRISPR-Local
Find 107 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCCAACCCCTTGATCTTTA+TGG | 0.155369 | 4:+91748604 | None:intergenic |
| TGCTCCCTGTGTATTCTTAA+AGG | 0.217148 | 4:+91747850 | None:intergenic |
| GGACTAAATGGTTGAGCTTC+AGG | 0.256983 | 4:+91747603 | None:intergenic |
| GAGACATTAATTGTCCAATT+TGG | 0.261504 | 4:+91748558 | None:intergenic |
| CCTGATTTAACAGGATCTTT+TGG | 0.271247 | 4:+91746777 | None:intergenic |
| AATCTACAATTACACCAAAT+TGG | 0.277160 | 4:-91748572 | MsG0480023963.01.T01:CDS |
| TCAGGTGATGATAGTAGATT+TGG | 0.285077 | 4:-91746759 | MsG0480023963.01.T01:CDS |
| CAGCAGCAGGAGTCTGCTTT+TGG | 0.298826 | 4:+91747305 | None:intergenic |
| ATGGCGTTCGTCAAAGGATT+TGG | 0.339452 | 4:+91747207 | None:intergenic |
| ATTTGGTGTAATTGTAGATT+GGG | 0.343560 | 4:+91748575 | None:intergenic |
| CTATCATCACCTGATTTAAC+AGG | 0.366026 | 4:+91746768 | None:intergenic |
| TAGGTGCTTACAGGACTAAA+TGG | 0.367374 | 4:+91747591 | None:intergenic |
| GCTTCCATCGACCGTAAAAT+CGG | 0.392626 | 4:-91747154 | MsG0480023963.01.T01:CDS |
| CCAAAAGATCCTGTTAAATC+AGG | 0.398256 | 4:-91746777 | MsG0480023963.01.T01:CDS |
| AATTTGGTGTAATTGTAGAT+TGG | 0.408821 | 4:+91748574 | None:intergenic |
| AAACTCTTTGATATCCTTCT+CGG | 0.411550 | 4:+91748053 | None:intergenic |
| TTGACTGATAAACTAAGTAT+TGG | 0.438409 | 4:-91747130 | MsG0480023963.01.T01:CDS |
| GAGCAAAAGGCAAGTGATGC+TGG | 0.451069 | 4:-91747023 | MsG0480023963.01.T01:CDS |
| AGCAATCCTTATGTATCAAC+CGG | 0.460676 | 4:-91746987 | MsG0480023963.01.T01:CDS |
| TCAAATGGCGTGATGGTGAC+AGG | 0.461655 | 4:+91747642 | None:intergenic |
| CAGGTGATGATAGTAGATTT+GGG | 0.463823 | 4:-91746758 | MsG0480023963.01.T01:CDS |
| TCAGCCTTCTTAACAGCAGC+AGG | 0.470780 | 4:+91747292 | None:intergenic |
| GACCATGGAGAAGGTCGAAA+TGG | 0.472925 | 4:-91746901 | MsG0480023963.01.T01:CDS |
| GACTAAATGGTTGAGCTTCA+GGG | 0.476963 | 4:+91747604 | None:intergenic |
| ATGTATCAACCGGAGCTTCG+TGG | 0.477069 | 4:-91746977 | MsG0480023963.01.T01:CDS |
| AAGAGATCATTTACAGTGAA+AGG | 0.479981 | 4:-91746863 | MsG0480023963.01.T01:CDS |
| AACAAAACCTTTGGCAAGCA+TGG | 0.482332 | 4:+91747255 | None:intergenic |
| GACTCCTGCTGCTGTTAAGA+AGG | 0.488682 | 4:-91747296 | MsG0480023963.01.T01:CDS |
| CCAGTGGACCATAAAGATCA+AGG | 0.496454 | 4:-91748612 | MsG0480023963.01.T01:CDS |
| CCTTGATCTTTATGGTCCAC+TGG | 0.505164 | 4:+91748612 | None:intergenic |
| GACAGGAGAATTTGCTATGT+TGG | 0.511315 | 4:+91747659 | None:intergenic |
| TAAGTGATGGCGTTCGTCAA+AGG | 0.516029 | 4:+91747201 | None:intergenic |
| ACTAAATGGTTGAGCTTCAG+GGG | 0.517698 | 4:+91747605 | None:intergenic |
| GCTCGACACCCACGAAGCTC+CGG | 0.518595 | 4:+91746968 | None:intergenic |
| GACCATAAAGATCAAGGGGT+TGG | 0.525650 | 4:-91748606 | MsG0480023963.01.T01:CDS |
| GAAGCTCCGGTTGATACATA+AGG | 0.526434 | 4:+91746981 | None:intergenic |
| GGCCATTTCGACCTTCTCCA+TGG | 0.533969 | 4:+91746899 | None:intergenic |
| TGTATCAACCGGAGCTTCGT+GGG | 0.542390 | 4:-91746976 | MsG0480023963.01.T01:CDS |
| CACTCTGAGAAACCTTCAGT+TGG | 0.554582 | 4:-91746810 | MsG0480023963.01.T01:CDS |
| AGACACAGCGGTGCTCTTGA+CGG | 0.555982 | 4:-91747828 | MsG0480023963.01.T01:intron |
| GACCTTCTCCATGGTCATTG+TGG | 0.556836 | 4:+91746908 | None:intergenic |
| GGAGAAGTACTTCCAACTGA+AGG | 0.564400 | 4:+91746798 | None:intergenic |
| TTATTATATGCAGGTTCCAG+TGG | 0.564713 | 4:-91748628 | None:intergenic |
| CAGTGGACCATAAAGATCAA+GGG | 0.577238 | 4:-91748611 | MsG0480023963.01.T01:CDS |
| TTTGGTGTAATTGTAGATTG+GGG | 0.593002 | 4:+91748576 | None:intergenic |
| GGAGAAGGTCGAAATGGCCG+AGG | 0.599248 | 4:-91746895 | MsG0480023963.01.T01:CDS |
| GTGAGCACCATGCTTGCCAA+AGG | 0.609575 | 4:-91747262 | MsG0480023963.01.T01:CDS |
| AAGCATTTGAAATTAAGTGA+TGG | 0.611170 | 4:+91747188 | None:intergenic |
| ATCAATGACTGCGACCGAGA+AGG | 0.612115 | 4:-91748067 | MsG0480023963.01.T01:CDS |
| GATCTCTTTCTTATCAACCT+CGG | 0.612294 | 4:+91746878 | None:intergenic |
| TGTTACCTTTAAGAATACAC+AGG | 0.630422 | 4:-91747855 | MsG0480023963.01.T01:CDS |
| ACGGTCGATGGAAGCAACTG+TGG | 0.631720 | 4:+91747162 | None:intergenic |
| AACCACAATGACCATGGAGA+AGG | 0.639861 | 4:-91746910 | MsG0480023963.01.T01:CDS |
| AGATGTAACCACAATGACCA+TGG | 0.653319 | 4:-91746916 | MsG0480023963.01.T01:CDS |
| AGTGGACCATAAAGATCAAG+GGG | 0.658714 | 4:-91748610 | MsG0480023963.01.T01:CDS |
| GTTACCTTTAAGAATACACA+GGG | 0.687476 | 4:-91747854 | MsG0480023963.01.T01:CDS |
| CTAAATGGTTGAGCTTCAGG+GGG | 0.692728 | 4:+91747606 | None:intergenic |
| TACACAGGGAGCAGACACAG+CGG | 0.763107 | 4:-91747840 | MsG0480023963.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATACATCTTATAAATTTAT+CGG | + | Chr4:91747923-91747942 | None:intergenic | 10.0% |
| !! | TTATATATTCTATTTATCAA+TGG | + | Chr4:91747609-91747628 | None:intergenic | 10.0% |
| !!! | CAGATTATTATTATTATTTT+TGG | - | Chr4:91747647-91747666 | MsG0480023963.01.T01:CDS | 10.0% |
| ! | AATCTACAATTACACCAAAT+TGG | - | Chr4:91746798-91746817 | MsG0480023963.01.T01:CDS | 25.0% |
| ! | AGGTAAAAATGAATCAACTT+AGG | + | Chr4:91747250-91747269 | None:intergenic | 25.0% |
| ! | ATAAATCCATAAATGCATAG+TGG | - | Chr4:91747037-91747056 | MsG0480023963.01.T01:intron | 25.0% |
| ! | CATTAAAATGGAAGGAAAAA+AGG | + | Chr4:91747406-91747425 | None:intergenic | 25.0% |
| ! | GAACAGATAAAAACTAACTT+AGG | + | Chr4:91747801-91747820 | None:intergenic | 25.0% |
| ! | TTGACTGATAAACTAAGTAT+TGG | - | Chr4:91748240-91748259 | MsG0480023963.01.T01:intron | 25.0% |
| !! | AAGCATTTGAAATTAAGTGA+TGG | + | Chr4:91748185-91748204 | None:intergenic | 25.0% |
| !! | ATTTTCACAATTCACTTACA+TGG | - | Chr4:91747453-91747472 | MsG0480023963.01.T01:intron | 25.0% |
| !! | TTTTCCTAAAACAAAACCTT+TGG | + | Chr4:91748127-91748146 | None:intergenic | 25.0% |
| !!! | AAAGGTTTTGTTTTAGGAAA+AGG | - | Chr4:91748126-91748145 | MsG0480023963.01.T01:intron | 25.0% |
| !!! | AATTTGGTGTAATTGTAGAT+TGG | + | Chr4:91746799-91746818 | None:intergenic | 25.0% |
| !!! | ATTTGGTGTAATTGTAGATT+GGG | + | Chr4:91746798-91746817 | None:intergenic | 25.0% |
| AAACTCTTTGATATCCTTCT+CGG | + | Chr4:91747320-91747339 | None:intergenic | 30.0% | |
| AAATGAAAAAGTGAGAGAGA+TGG | - | Chr4:91748275-91748294 | MsG0480023963.01.T01:intron | 30.0% | |
| AAGAGATCATTTACAGTGAA+AGG | - | Chr4:91748507-91748526 | MsG0480023963.01.T01:intron | 30.0% | |
| AATACCAACACATGACAATA+AGG | + | Chr4:91747167-91747186 | None:intergenic | 30.0% | |
| AGCAATGACACTCATTAAAA+TGG | + | Chr4:91747418-91747437 | None:intergenic | 30.0% | |
| ATATTTATATTGCAGTGTCC+AGG | + | Chr4:91746940-91746959 | None:intergenic | 30.0% | |
| ATGACACTCATTAAAATGGA+AGG | + | Chr4:91747414-91747433 | None:intergenic | 30.0% | |
| ATGCTTCTCTTTATAGTACA+GGG | - | Chr4:91747686-91747705 | MsG0480023963.01.T01:intron | 30.0% | |
| CTAGAGTGAAAACATGATAT+TGG | + | Chr4:91746914-91746933 | None:intergenic | 30.0% | |
| GAGACATTAATTGTCCAATT+TGG | + | Chr4:91746815-91746834 | None:intergenic | 30.0% | |
| GTATGACTCATTTATTTAGC+AGG | - | Chr4:91747873-91747892 | MsG0480023963.01.T01:CDS | 30.0% | |
| TAAGATAATTCGATACTGGT+AGG | + | Chr4:91747830-91747849 | None:intergenic | 30.0% | |
| TTATCTTAGCAGTAAAAGTG+TGG | - | Chr4:91747842-91747861 | MsG0480023963.01.T01:CDS | 30.0% | |
| TTGAATCCACTATGCATTTA+TGG | + | Chr4:91747046-91747065 | None:intergenic | 30.0% | |
| ! | AAAGAGTTTTTCTCATTCTC+TGG | - | Chr4:91747331-91747350 | MsG0480023963.01.T01:intron | 30.0% |
| ! | ATAATTTTCAAATGGCGTGA+TGG | + | Chr4:91747738-91747757 | None:intergenic | 30.0% |
| ! | GGAAGCTGATAATTTTCAAA+TGG | + | Chr4:91747746-91747765 | None:intergenic | 30.0% |
| ! | GTTACCTTTAAGAATACACA+GGG | - | Chr4:91747516-91747535 | MsG0480023963.01.T01:intron | 30.0% |
| ! | TGTTACCTTTAAGAATACAC+AGG | - | Chr4:91747515-91747534 | MsG0480023963.01.T01:intron | 30.0% |
| ! | TTTGGTGTAATTGTAGATTG+GGG | + | Chr4:91746797-91746816 | None:intergenic | 30.0% |
| ! | TTTTCTGATTATGTTGTAGC+AGG | + | Chr4:91746968-91746987 | None:intergenic | 30.0% |
| !! | AATGCATAGTGGATTCAAAT+TGG | - | Chr4:91747048-91747067 | MsG0480023963.01.T01:intron | 30.0% |
| !! | AGTTGATTCATTTTTACCTC+TGG | - | Chr4:91747251-91747270 | MsG0480023963.01.T01:CDS | 30.0% |
| !! | ATGCATAGTGGATTCAAATT+GGG | - | Chr4:91747049-91747068 | MsG0480023963.01.T01:intron | 30.0% |
| !! | TATCAGTCAAACCGATTTTA+CGG | + | Chr4:91748230-91748249 | None:intergenic | 30.0% |
| !!! | ACTTACATGGAATTTTTTGC+AGG | - | Chr4:91747466-91747485 | MsG0480023963.01.T01:intron | 30.0% |
| !!! | CTTACATGGAATTTTTTGCA+GGG | - | Chr4:91747467-91747486 | MsG0480023963.01.T01:intron | 30.0% |
| !!! | TTGCTGATTTTAACTGCTTT+TGG | - | Chr4:91747112-91747131 | MsG0480023963.01.T01:CDS | 30.0% |
| AAACTAACTTAGGTGCTTAC+AGG | + | Chr4:91747791-91747810 | None:intergenic | 35.0% | |
| AGCAATCCTTATGTATCAAC+CGG | - | Chr4:91748383-91748402 | MsG0480023963.01.T01:intron | 35.0% | |
| CAGGTGATGATAGTAGATTT+GGG | - | Chr4:91748612-91748631 | MsG0480023963.01.T01:CDS | 35.0% | |
| CATGCTTCTCTTTATAGTAC+AGG | - | Chr4:91747685-91747704 | MsG0480023963.01.T01:intron | 35.0% | |
| CCAAAAGATCCTGTTAAATC+AGG | - | Chr4:91748593-91748612 | MsG0480023963.01.T01:CDS | 35.0% | |
| CTATCATCACCTGATTTAAC+AGG | + | Chr4:91748605-91748624 | None:intergenic | 35.0% | |
| CTGCTAAGATAATTCGATAC+TGG | + | Chr4:91747834-91747853 | None:intergenic | 35.0% | |
| GAGAGATGGATGAAAATTTC+AGG | - | Chr4:91748289-91748308 | MsG0480023963.01.T01:intron | 35.0% | |
| GATCTCTTTCTTATCAACCT+CGG | + | Chr4:91748495-91748514 | None:intergenic | 35.0% | |
| TAACCTTTGATGTTGATCTC+AGG | - | Chr4:91748041-91748060 | MsG0480023963.01.T01:CDS | 35.0% | |
| TCAGGTGATGATAGTAGATT+TGG | - | Chr4:91748611-91748630 | MsG0480023963.01.T01:CDS | 35.0% | |
| TTACCTCTGGCAGATAAAAA+CGG | - | Chr4:91747264-91747283 | MsG0480023963.01.T01:CDS | 35.0% | |
| ! | CCTGATTTAACAGGATCTTT+TGG | + | Chr4:91748596-91748615 | None:intergenic | 35.0% |
| !!! | CTTGCCAAAGGTTTTGTTTT+AGG | - | Chr4:91748120-91748139 | MsG0480023963.01.T01:intron | 35.0% |
| AACAAAACCTTTGGCAAGCA+TGG | + | Chr4:91748118-91748137 | None:intergenic | 40.0% | |
| ACTAAATGGTTGAGCTTCAG+GGG | + | Chr4:91747768-91747787 | None:intergenic | 40.0% | |
| AGATGTAACCACAATGACCA+TGG | - | Chr4:91748454-91748473 | MsG0480023963.01.T01:intron | 40.0% | |
| AGTGGACCATAAAGATCAAG+GGG | - | Chr4:91746760-91746779 | MsG0480023963.01.T01:CDS | 40.0% | |
| CAGTGGACCATAAAGATCAA+GGG | - | Chr4:91746759-91746778 | MsG0480023963.01.T01:CDS | 40.0% | |
| CTGGCAGATAAAAACGGTTA+AGG | - | Chr4:91747270-91747289 | MsG0480023963.01.T01:CDS | 40.0% | |
| GAAAAAAGGATTGCATTGCG+AGG | + | Chr4:91747392-91747411 | None:intergenic | 40.0% | |
| GACTAAATGGTTGAGCTTCA+GGG | + | Chr4:91747769-91747788 | None:intergenic | 40.0% | |
| TAGGTGCTTACAGGACTAAA+TGG | + | Chr4:91747782-91747801 | None:intergenic | 40.0% | |
| TGCTCCCTGTGTATTCTTAA+AGG | + | Chr4:91747523-91747542 | None:intergenic | 40.0% | |
| TTATGCTGTTGCTGAGCAAA+AGG | - | Chr4:91748334-91748353 | MsG0480023963.01.T01:intron | 40.0% | |
| ! | ATGTTTTCACTCTAGATGCC+TGG | - | Chr4:91746919-91746938 | MsG0480023963.01.T01:CDS | 40.0% |
| ! | TCTGCCTTATTGTCATGTGT+TGG | - | Chr4:91747160-91747179 | MsG0480023963.01.T01:CDS | 40.0% |
| !! | GACAGGAGAATTTGCTATGT+TGG | + | Chr4:91747714-91747733 | None:intergenic | 40.0% |
| !! | TAACCGTTTTTATCTGCCAG+AGG | + | Chr4:91747270-91747289 | None:intergenic | 40.0% |
| AACCACAATGACCATGGAGA+AGG | - | Chr4:91748460-91748479 | MsG0480023963.01.T01:intron | 45.0% | |
| ATGGCGTTCGTCAAAGGATT+TGG | + | Chr4:91748166-91748185 | None:intergenic | 45.0% | |
| CCAGTGGACCATAAAGATCA+AGG | - | Chr4:91746758-91746777 | MsG0480023963.01.T01:CDS | 45.0% | |
| CCTTGATCTTTATGGTCCAC+TGG | + | Chr4:91746761-91746780 | None:intergenic | 45.0% | |
| CTAAATGGTTGAGCTTCAGG+GGG | + | Chr4:91747767-91747786 | None:intergenic | 45.0% | |
| CTCCAACCCCTTGATCTTTA+TGG | + | Chr4:91746769-91746788 | None:intergenic | 45.0% | |
| GACCATAAAGATCAAGGGGT+TGG | - | Chr4:91746764-91746783 | MsG0480023963.01.T01:CDS | 45.0% | |
| GCTTCCATCGACCGTAAAAT+CGG | - | Chr4:91748216-91748235 | MsG0480023963.01.T01:intron | 45.0% | |
| GGACTAAATGGTTGAGCTTC+AGG | + | Chr4:91747770-91747789 | None:intergenic | 45.0% | |
| GGTCCTGAGATCAACATCAA+AGG | + | Chr4:91748047-91748066 | None:intergenic | 45.0% | |
| ! | CACTCTGAGAAACCTTCAGT+TGG | - | Chr4:91748560-91748579 | MsG0480023963.01.T01:CDS | 45.0% |
| ! | GAAGCTCCGGTTGATACATA+AGG | + | Chr4:91748392-91748411 | None:intergenic | 45.0% |
| ! | TAAGTGATGGCGTTCGTCAA+AGG | + | Chr4:91748172-91748191 | None:intergenic | 45.0% |
| !! | CAAACCGATTTTACGGTCGA+TGG | + | Chr4:91748223-91748242 | None:intergenic | 45.0% |
| !! | GGAGAAGTACTTCCAACTGA+AGG | + | Chr4:91748575-91748594 | None:intergenic | 45.0% |
| !! | AAAATATAAAATATATGAAT+TGG | - | Chr4:91746885-91746904 | MsG0480023963.01.T01:CDS | 5.0% |
| !! | AAATATAAAATATATGAATT+GGG | - | Chr4:91746886-91746905 | MsG0480023963.01.T01:CDS | 5.0% |
| ATCAATGACTGCGACCGAGA+AGG | - | Chr4:91747303-91747322 | MsG0480023963.01.T01:CDS | 50.0% | |
| ATGTATCAACCGGAGCTTCG+TGG | - | Chr4:91748393-91748412 | MsG0480023963.01.T01:intron | 50.0% | |
| GACCATGGAGAAGGTCGAAA+TGG | - | Chr4:91748469-91748488 | MsG0480023963.01.T01:intron | 50.0% | |
| GACCTTCTCCATGGTCATTG+TGG | + | Chr4:91748465-91748484 | None:intergenic | 50.0% | |
| GACTCCTGCTGCTGTTAAGA+AGG | - | Chr4:91748074-91748093 | MsG0480023963.01.T01:CDS | 50.0% | |
| GAGCAAAAGGCAAGTGATGC+TGG | - | Chr4:91748347-91748366 | MsG0480023963.01.T01:intron | 50.0% | |
| TCAGCCTTCTTAACAGCAGC+AGG | + | Chr4:91748081-91748100 | None:intergenic | 50.0% | |
| TGTATCAACCGGAGCTTCGT+GGG | - | Chr4:91748394-91748413 | MsG0480023963.01.T01:intron | 50.0% | |
| ! | TCAAATGGCGTGATGGTGAC+AGG | + | Chr4:91747731-91747750 | None:intergenic | 50.0% |
| ACGGTCGATGGAAGCAACTG+TGG | + | Chr4:91748211-91748230 | None:intergenic | 55.0% | |
| AGACACAGCGGTGCTCTTGA+CGG | - | Chr4:91747542-91747561 | MsG0480023963.01.T01:intron | 55.0% | |
| GGCCATTTCGACCTTCTCCA+TGG | + | Chr4:91748474-91748493 | None:intergenic | 55.0% | |
| GTGAGCACCATGCTTGCCAA+AGG | - | Chr4:91748108-91748127 | MsG0480023963.01.T01:intron | 55.0% | |
| TACACAGGGAGCAGACACAG+CGG | - | Chr4:91747530-91747549 | MsG0480023963.01.T01:intron | 55.0% | |
| ! | CAGCAGCAGGAGTCTGCTTT+TGG | + | Chr4:91748068-91748087 | None:intergenic | 55.0% |
| CAGCGGTGCTCTTGACGGTA+TGG | - | Chr4:91747547-91747566 | MsG0480023963.01.T01:intron | 60.0% | |
| GGAGAAGGTCGAAATGGCCG+AGG | - | Chr4:91748475-91748494 | MsG0480023963.01.T01:intron | 60.0% | |
| GCTCGACACCCACGAAGCTC+CGG | + | Chr4:91748405-91748424 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 91746749 | 91748643 | 91746749 | ID=MsG0480023963.01;Name=MsG0480023963.01 |
| Chr4 | mRNA | 91746749 | 91748643 | 91746749 | ID=MsG0480023963.01.T01;Parent=MsG0480023963.01;Name=MsG0480023963.01.T01;_AED=0.35;_eAED=0.35;_QI=0|0|0|1|1|1|6|0|289 |
| Chr4 | exon | 91748554 | 91748643 | 91748554 | ID=MsG0480023963.01.T01:exon:8018;Parent=MsG0480023963.01.T01 |
| Chr4 | exon | 91748012 | 91748115 | 91748012 | ID=MsG0480023963.01.T01:exon:8017;Parent=MsG0480023963.01.T01 |
| Chr4 | exon | 91747829 | 91747904 | 91747829 | ID=MsG0480023963.01.T01:exon:8016;Parent=MsG0480023963.01.T01 |
| Chr4 | exon | 91747602 | 91747685 | 91747602 | ID=MsG0480023963.01.T01:exon:8015;Parent=MsG0480023963.01.T01 |
| Chr4 | exon | 91747108 | 91747329 | 91747108 | ID=MsG0480023963.01.T01:exon:8014;Parent=MsG0480023963.01.T01 |
| Chr4 | exon | 91746749 | 91747042 | 91746749 | ID=MsG0480023963.01.T01:exon:8013;Parent=MsG0480023963.01.T01 |
| Chr4 | CDS | 91748554 | 91748643 | 91748554 | ID=MsG0480023963.01.T01:cds;Parent=MsG0480023963.01.T01 |
| Chr4 | CDS | 91748012 | 91748115 | 91748012 | ID=MsG0480023963.01.T01:cds;Parent=MsG0480023963.01.T01 |
| Chr4 | CDS | 91747829 | 91747904 | 91747829 | ID=MsG0480023963.01.T01:cds;Parent=MsG0480023963.01.T01 |
| Chr4 | CDS | 91747602 | 91747685 | 91747602 | ID=MsG0480023963.01.T01:cds;Parent=MsG0480023963.01.T01 |
| Chr4 | CDS | 91747108 | 91747329 | 91747108 | ID=MsG0480023963.01.T01:cds;Parent=MsG0480023963.01.T01 |
| Chr4 | CDS | 91746749 | 91747042 | 91746749 | ID=MsG0480023963.01.T01:cds;Parent=MsG0480023963.01.T01 |
| Gene Sequence |
| Protein sequence |
