AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580024258.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580024258.01.T01 MTR_5g007710 75.592 422 20 5 160 498 1 422 0.0 599
MsG0580024258.01.T01 MTR_5g007710 75.369 406 17 5 160 482 1 406 0.0 568
MsG0580024258.01.T01 MTR_4g077800 65.347 404 55 5 160 478 1 404 5.97e-163 473
MsG0580024258.01.T01 MTR_4g077800 65.347 404 55 5 160 478 1 404 7.49e-163 472
MsG0580024258.01.T01 MTR_5g007700 82.447 188 3 1 1 158 93 280 5.79e-100 306
MsG0580024258.01.T01 MTR_5g007700 82.447 188 3 1 1 158 93 280 2.32e-99 306
MsG0580024258.01.T01 MTR_5g061700 62.437 197 36 1 1 159 88 284 6.76e-60 203
MsG0580024258.01.T01 MTR_3g007760 34.756 164 80 6 280 430 253 402 6.66e-20 93.6
MsG0580024258.01.T01 MTR_3g007760 34.756 164 80 6 280 430 230 379 7.02e-20 93.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580024258.01.T01 AT3G16090 59.606 406 78 7 160 479 1 406 4.88e-154 449
MsG0580024258.01.T01 AT1G65040 56.618 408 87 5 160 479 1 406 4.83e-148 433
MsG0580024258.01.T01 AT1G65040 57.143 385 98 7 160 479 1 383 2.80e-140 412
MsG0580024258.01.T01 AT1G65040 50.144 347 130 8 160 477 1 333 2.63e-95 295
MsG0580024258.01.T01 AT1G65040 53.962 265 75 6 258 477 1 263 6.12e-83 261
MsG0580024258.01.T01 AT1G65040 68.786 173 43 2 316 479 57 227 2.47e-77 245
MsG0580024258.01.T01 AT1G65040 68.539 178 44 3 316 483 83 258 2.62e-77 244
MsG0580024258.01.T01 AT4G25230 38.406 138 60 5 284 410 256 379 2.60e-19 92.0
MsG0580024258.01.T01 AT4G25230 38.406 138 60 5 284 410 256 379 2.60e-19 92.0
MsG0580024258.01.T01 AT4G25230 38.406 138 60 5 284 410 256 379 2.60e-19 92.0
MsG0580024258.01.T01 AT5G51450 36.232 138 63 5 284 410 256 379 1.61e-15 80.1
MsG0580024258.01.T01 AT5G51450 36.232 138 63 5 284 410 256 379 1.66e-15 80.1
MsG0580024258.01.T01 AT5G01960 34.862 109 67 3 313 417 302 410 3.09e-11 65.9
MsG0580024258.01.T01 AT2G44581 39.535 86 45 3 343 422 42 126 9.58e-11 60.5

Find 142 sgRNAs with CRISPR-Local

Find 497 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCACTGTCATTGGAGTTAT+TGG 0.134555 5:+2658110 MsG0580024258.01.T01:five_prime_UTR
CACTGCATTGTTGTTAATTA+AGG 0.141626 5:+2664116 MsG0580024258.01.T01:CDS
ACTATCATGAATGAACTTTA+TGG 0.145449 5:+2658161 MsG0580024258.01.T01:exon
GCGCCGGCGCGGTTGATTTC+CGG 0.211605 5:-2657877 None:intergenic
TAAAAGATACAATTCGAATA+TGG 0.213863 5:-2664206 None:intergenic
AGCTCTTCAGGGGTTGCTTC+TGG 0.229501 5:-2665487 None:intergenic
GTCATTGGAGTTATTGGATT+TGG 0.233496 5:+2658116 MsG0580024258.01.T01:five_prime_UTR
GCTCGGACGTTGGGCCCTTT+TGG 0.242748 5:+2666159 MsG0580024258.01.T01:CDS
CATTGTTTCGATCGATGATT+TGG 0.252162 5:-2657782 None:intergenic
TCTTCAGATTGTATAGTAAA+AGG 0.263887 5:-2658828 None:intergenic
TGAATTAGCTCATGACCTTA+TGG 0.266202 5:+2659125 MsG0580024258.01.T01:CDS
GGCTTTGCTAGAAGGATCTT+TGG 0.283245 5:-2657828 None:intergenic
CATTTCAGACCCATCTTTGC+TGG 0.298245 5:+2660219 MsG0580024258.01.T01:CDS
TCATGACCTTATGGGTATTC+AGG 0.312013 5:+2659134 MsG0580024258.01.T01:CDS
TCTCGTATAGCTCCCGTATT+AGG 0.318051 5:-2665387 None:intergenic
GGGAGCTATACGAGACATTT+AGG 0.322570 5:+2665395 MsG0580024258.01.T01:CDS
ACTCACGCATTGAGCTCTTC+AGG 0.330562 5:-2665499 None:intergenic
AATACTGATTTCACTGTCAT+TGG 0.347521 5:+2658101 MsG0580024258.01.T01:five_prime_UTR
TCAACAATTTCTTTGCTGAA+TGG 0.373912 5:+2659087 MsG0580024258.01.T01:CDS
TCAATCTTCTCTCTGATTCA+TGG 0.376107 5:+2657953 MsG0580024258.01.T01:five_prime_UTR
GGCATTTATGCTCGGACGTT+GGG 0.377151 5:+2666150 MsG0580024258.01.T01:CDS
AAGAAGCACCAAACTGATCT+TGG 0.383609 5:-2663912 None:intergenic
GCAATCATGGAGGGAGGTTA+TGG 0.389288 5:+2664032 MsG0580024258.01.T01:CDS
GAAGGCAATGAACATGAAAA+AGG 0.391922 5:-2665670 None:intergenic
AATTAAGGCTTTACATTGGT+TGG 0.392154 5:+2664131 MsG0580024258.01.T01:CDS
AGTTGATCTATCAGAAACTA+TGG 0.394151 5:+2665352 MsG0580024258.01.T01:intron
GAATTCCCTTGCACCTAATA+CGG 0.394661 5:+2665374 MsG0580024258.01.T01:CDS
TCACAATCATGGTCATCAAC+AGG 0.396047 5:+2665788 MsG0580024258.01.T01:CDS
ATATGCTGGTCTTAGTTTGA+TGG 0.410943 5:+2663814 MsG0580024258.01.T01:CDS
AAAAGATACAATTCGAATAT+GGG 0.417391 5:-2664205 None:intergenic
CAATCTTCTCTCTGATTCAT+GGG 0.422939 5:+2657954 MsG0580024258.01.T01:five_prime_UTR
ACACCATTGCCGGATAAAAC+TGG 0.424380 5:-2663877 None:intergenic
CGAGTCCTGGCTTTGCTAGA+AGG 0.426901 5:-2657836 None:intergenic
TCTTAGTTTGATGGCAACTT+TGG 0.428785 5:+2663823 MsG0580024258.01.T01:CDS
TTCAACTTCCAAGATCAGTT+TGG 0.429813 5:+2663904 MsG0580024258.01.T01:CDS
GAATTAGCTCATGACCTTAT+GGG 0.429992 5:+2659126 MsG0580024258.01.T01:CDS
ATGTTCATTGCCTTCGATCA+TGG 0.435620 5:+2665678 MsG0580024258.01.T01:CDS
AACTGCTGCTGGAGGTCAGC+AGG 0.439414 5:+2665763 MsG0580024258.01.T01:CDS
TTGCCCTACTTGCAGAGCCT+TGG 0.442641 5:+2665718 MsG0580024258.01.T01:CDS
GTTGAAAGATACACCATTGC+CGG 0.449042 5:-2663887 None:intergenic
TGGCATTGAACCTAGGATAT+CGG 0.450369 5:+2658881 MsG0580024258.01.T01:CDS
TCAAAATAAGCAAATCCAAA+AGG 0.450986 5:-2666174 None:intergenic
TGCCGCCCCACTGCCAAGCT+CGG 0.454269 5:-2666019 None:intergenic
CAACCAAGGCTCTGCAAGTA+GGG 0.460830 5:-2665721 None:intergenic
CTTTGGAGATGGAGAGGGTC+AGG 0.461253 5:-2657811 None:intergenic
GGAGCTCCGGTGACGAGTCC+TGG 0.463133 5:-2657849 None:intergenic
CTCACGCATTGAGCTCTTCA+GGG 0.465783 5:-2665498 None:intergenic
GCTAGAGTTCTGTGAAATAG+AGG 0.467187 5:-2660245 None:intergenic
GAAATCAACCGCGCCGGCGC+CGG 0.469862 5:+2657880 MsG0580024258.01.T01:five_prime_UTR
CGGCATTTATGCTCGGACGT+TGG 0.469866 5:+2666149 MsG0580024258.01.T01:CDS
AGAATCATCTTCGCCGGCGC+CGG 0.470254 5:-2657893 None:intergenic
GAAAATGGAACAACTGCTGC+TGG 0.475916 5:+2665752 MsG0580024258.01.T01:CDS
CGCGGTTGATTTCCGGATAT+AGG 0.476162 5:-2657870 None:intergenic
CTCTGTTACATTCCTTGCGA+TGG 0.480228 5:+2664092 MsG0580024258.01.T01:CDS
ATTTCACAGAACTCTAGCTC+AGG 0.488100 5:+2660250 MsG0580024258.01.T01:CDS
TACCGTACAAAAGAAGTTGC+GGG 0.488992 5:-2666126 None:intergenic
ATAGAGGAAGCCAGCAAAGA+TGG 0.490424 5:-2660229 None:intergenic
AAAACAGAAGCACTAAATAC+AGG 0.498655 5:-2659036 None:intergenic
ATGGCGAGACATTGTTCTAC+TGG 0.499297 5:+2658861 MsG0580024258.01.T01:CDS
GTTATTGGATTTGGATCACC+TGG 0.502689 5:+2658125 MsG0580024258.01.T01:five_prime_UTR
GGATTTGGATCACCTGGAGT+TGG 0.507763 5:+2658131 MsG0580024258.01.T01:five_prime_UTR
GGTCAAACCGAGCTTGGCAG+TGG 0.508618 5:+2666012 MsG0580024258.01.T01:CDS
TACGGTACGGCATTTATGCT+CGG 0.509045 5:+2666142 MsG0580024258.01.T01:CDS
TATATATAATAGAGATGCGT+TGG 0.510081 5:+2657730 None:intergenic
GGGTAATCTTCGAGAGGCTG+AGG 0.510249 5:+2663993 MsG0580024258.01.T01:CDS
CAAAATAAGCAAATCCAAAA+GGG 0.511071 5:-2666173 None:intergenic
AGAGGCTTAATGAGCAATCA+TGG 0.512252 5:+2664019 MsG0580024258.01.T01:CDS
CATCTTCGCCGGCGCCGGCG+CGG 0.512518 5:-2657888 None:intergenic
AAGCTGCAGCAGCAGCTGCT+TGG 0.515752 5:-2666074 None:intergenic
AGATTGAGGGATGCGACGGA+AGG 0.518935 5:-2657937 None:intergenic
AGTACAGGTCAAACCGAGCT+TGG 0.522407 5:+2666006 MsG0580024258.01.T01:intron
AGTTCCTGAGTTCGAATACA+TGG 0.523005 5:+2660291 MsG0580024258.01.T01:CDS
GTCAGCAGGCATCACAATCA+TGG 0.525814 5:+2665777 MsG0580024258.01.T01:CDS
GTCAAACCGAGCTTGGCAGT+GGG 0.527655 5:+2666013 MsG0580024258.01.T01:CDS
GTCACCGGAGCTCCTATATC+CGG 0.530271 5:+2657858 MsG0580024258.01.T01:five_prime_UTR
CAAATCATCGATCGAAACAA+TGG 0.530706 5:+2657783 MsG0580024258.01.T01:five_prime_UTR
GCTAGAAGGATCTTTGGAGA+TGG 0.533257 5:-2657822 None:intergenic
ATAGTAGATTTGCCAACTCC+AGG 0.535261 5:-2658143 None:intergenic
GCAGCTGAGGAAGGCACTCA+TGG 0.537817 5:+2660919 MsG0580024258.01.T01:CDS
ATACGTTCAGCCGATATCCT+AGG 0.538564 5:-2658891 None:intergenic
TGAATCAGAGAGAAGATTGA+GGG 0.542964 5:-2657950 None:intergenic
AGAAATTGTTGAAGAGCCAT+CGG 0.544249 5:-2659076 None:intergenic
AAGATCCTTCTAGCAAAGCC+AGG 0.547363 5:+2657831 MsG0580024258.01.T01:five_prime_UTR
ATTTCCGGATATAGGAGCTC+CGG 0.547450 5:-2657862 None:intergenic
TAGAGGAAGCCAGCAAAGAT+GGG 0.547741 5:-2660228 None:intergenic
GAAATTGTTGAAGAGCCATC+GGG 0.548892 5:-2659075 None:intergenic
AATTCCCTTGCACCTAATAC+GGG 0.549400 5:+2665375 MsG0580024258.01.T01:CDS
ACAACCAAGGCTCTGCAAGT+AGG 0.549795 5:-2665722 None:intergenic
TTCGAGAGGCTGAGGTTGAG+AGG 0.554605 5:+2664001 MsG0580024258.01.T01:CDS
TGTTTACCTGAATACCCATA+AGG 0.555633 5:-2659140 None:intergenic
AAATTGTTTGCAGCTGAGGA+AGG 0.558436 5:+2660910 MsG0580024258.01.T01:CDS
ATGAATCAGAGAGAAGATTG+AGG 0.559170 5:-2657951 None:intergenic
AAATGCTATCTAGAAGAAGA+AGG 0.561235 5:-2664236 None:intergenic
ACATTTGATACAAACATGGC+AGG 0.563896 5:+2664278 MsG0580024258.01.T01:CDS
GTTCTACTGGCATTGAACCT+AGG 0.564457 5:+2658874 MsG0580024258.01.T01:CDS
GGCCTCTACTGTTAAATGCA+TGG 0.568487 5:-2663856 None:intergenic
CGGGGAGAAAGCGGTCGAAG+TGG 0.569328 5:-2657981 None:intergenic
CTGAGTAGAATCATCTTCGC+CGG 0.571878 5:-2657899 None:intergenic
GCAAAGCCAGGACTCGTCAC+CGG 0.578733 5:+2657843 MsG0580024258.01.T01:five_prime_UTR
TAGCTCCCGTATTAGGTGCA+AGG 0.580282 5:-2665380 None:intergenic
ATCTGAAGAGAATAGAGCTA+TGG 0.580561 5:+2658842 MsG0580024258.01.T01:CDS
TGGGATAATGTGGTCACTGT+AGG 0.584012 5:-2664186 None:intergenic
AACCGAGCTTGGCAGTGGGG+CGG 0.584169 5:+2666017 MsG0580024258.01.T01:CDS
CGACGGAAGGGAGACGAGAA+CGG 0.584286 5:-2657924 None:intergenic
TATTACTTACGGGGAGAAAG+CGG 0.585454 5:-2657990 None:intergenic
GATTGAGGGATGCGACGGAA+GGG 0.585515 5:-2657936 None:intergenic
AGCTCCCGTATTAGGTGCAA+GGG 0.585630 5:-2665379 None:intergenic
AATTCGAATATGGGATAATG+TGG 0.586853 5:-2664196 None:intergenic
GAAAGCAAAGAACAGTGAAA+CGG 0.588487 5:-2664304 None:intergenic
TACCATGCATTTAACAGTAG+AGG 0.591610 5:+2663854 MsG0580024258.01.T01:CDS
GAGAAGATTGAGGGATGCGA+CGG 0.597168 5:-2657941 None:intergenic
TCATCGATCGAAACAATGGC+GGG 0.600018 5:+2657787 MsG0580024258.01.T01:five_prime_UTR
AGGATCTTTGGAGATGGAGA+GGG 0.605144 5:-2657816 None:intergenic
AAGGATCTTTGGAGATGGAG+AGG 0.607584 5:-2657817 None:intergenic
TGTTAATTAAGGCTTTACAT+TGG 0.609042 5:+2664127 MsG0580024258.01.T01:CDS
TATCATACTTCTTGATACAC+AGG 0.609304 5:+2658911 MsG0580024258.01.T01:CDS
TCACGCATTGAGCTCTTCAG+GGG 0.610326 5:-2665497 None:intergenic
TAATGTGGTCACTGTAGGAG+TGG 0.615046 5:-2664181 None:intergenic
ATGAGCTAATTCAGCTGACA+AGG 0.615131 5:-2659115 None:intergenic
GTAGCCATGTATTCGAACTC+AGG 0.615484 5:-2660295 None:intergenic
GTCGCTCTAGCCATGATCGA+AGG 0.616148 5:-2665688 None:intergenic
GTACCGTACAAAAGAAGTTG+CGG 0.620554 5:-2666127 None:intergenic
ATGAGGTTGAAGACATATGC+TGG 0.621421 5:+2663800 MsG0580024258.01.T01:CDS
GCTGAGATGACGAGACCCGA+TGG 0.623490 5:+2659060 MsG0580024258.01.T01:CDS
CACAATCATGGTCATCAACA+GGG 0.624882 5:+2665789 MsG0580024258.01.T01:CDS
CAATGAATGAATGTCAACAA+TGG 0.628373 5:-2657754 None:intergenic
TATCCGGAAATCAACCGCGC+CGG 0.631251 5:+2657874 MsG0580024258.01.T01:five_prime_UTR
CGGCAACTGATAGTTTCAGT+CGG 0.633685 5:+2666037 MsG0580024258.01.T01:CDS
ACAATGCAGTGACCATCGCA+AGG 0.636559 5:-2664104 None:intergenic
AATGGAACAACTGCTGCTGG+AGG 0.637463 5:+2665755 MsG0580024258.01.T01:CDS
ATCATCGATCGAAACAATGG+CGG 0.638972 5:+2657786 MsG0580024258.01.T01:five_prime_UTR
ATTCTTGGGTAATCTTCGAG+AGG 0.645712 5:+2663987 MsG0580024258.01.T01:CDS
TTTCACAGAACTCTAGCTCA+GGG 0.646481 5:+2660251 MsG0580024258.01.T01:CDS
TCAGATTGTATAGTAAAAGG+TGG 0.650286 5:-2658825 None:intergenic
GCTTAATGAGCAATCATGGA+GGG 0.653113 5:+2664023 MsG0580024258.01.T01:CDS
TGAAACATTTGATACAAACA+TGG 0.654358 5:+2664274 MsG0580024258.01.T01:CDS
TGTTGTGTAGGAACATGATG+AGG 0.658655 5:+2663783 MsG0580024258.01.T01:intron
GCTTGTGCGGACAACTTGTG+CGG 0.672607 5:+2666197 MsG0580024258.01.T01:CDS
GGCTTAATGAGCAATCATGG+AGG 0.679748 5:+2664022 MsG0580024258.01.T01:CDS
TCAAACCGAGCTTGGCAGTG+GGG 0.681424 5:+2666014 MsG0580024258.01.T01:CDS
TAATGAGCAATCATGGAGGG+AGG 0.688793 5:+2664026 MsG0580024258.01.T01:CDS
CGTACAAAAGAAGTTGCGGG+AGG 0.739850 5:-2666123 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAAATAAAATAAAAAA+AGG + Chr5:2663321-2663340 MsG0580024258.01.T01:intron 0.0%
!! TTATATTAATAATCTAAACA+AGG - Chr5:2663016-2663035 None:intergenic 10.0%
!!! AATTTTTTGCTAAAATAATT+TGG + Chr5:2659537-2659556 MsG0580024258.01.T01:intron 10.0%
!!! TATATTTGTTTCTTTTTTAA+AGG - Chr5:2661923-2661942 None:intergenic 10.0%
!!! TTATTTCTTTTATAAACTTA+TGG + Chr5:2660118-2660137 MsG0580024258.01.T01:intron 10.0%
!!! TTTTCATATTCATTTTATTT+TGG + Chr5:2665276-2665295 MsG0580024258.01.T01:intron 10.0%
!! AAAAAAATAAAAAATTGGAG+AGG - Chr5:2659823-2659842 None:intergenic 15.0%
!! AAAAAATAAAAAATTGGAGA+GGG - Chr5:2659822-2659841 None:intergenic 15.0%
!! AAATAATACTATCAACAATT+AGG - Chr5:2664575-2664594 None:intergenic 15.0%
!! ACATATAGTAATATGATTTA+TGG - Chr5:2664649-2664668 None:intergenic 15.0%
!! AGAAAAAATAAAAGAAACTA+AGG - Chr5:2658753-2658772 None:intergenic 15.0%
!! AGATTATTTCAATTTCAATT+AGG - Chr5:2660835-2660854 None:intergenic 15.0%
!! ATATAGTAATATGATTTATG+GGG - Chr5:2664647-2664666 None:intergenic 15.0%
!! CATATAGTAATATGATTTAT+GGG - Chr5:2664648-2664667 None:intergenic 15.0%
!! GATTATTTCAATTTCAATTA+GGG - Chr5:2660834-2660853 None:intergenic 15.0%
!! TGTGAAAATACAAATAAAAT+AGG - Chr5:2664819-2664838 None:intergenic 15.0%
!! TTATAGAAAATTTGAAAGAA+AGG - Chr5:2662955-2662974 None:intergenic 15.0%
!!! AAACTTTTTTTTTTTTTGAG+AGG + Chr5:2662501-2662520 MsG0580024258.01.T01:intron 15.0%
!!! AAATTTGACGTAAATTTTAA+AGG + Chr5:2662433-2662452 MsG0580024258.01.T01:intron 15.0%
!!! ATTTATCTTTTCAAATAAAC+CGG + Chr5:2664606-2664625 MsG0580024258.01.T01:intron 15.0%
!!! CGATAAATTTTAAATTAACT+CGG - Chr5:2662400-2662419 None:intergenic 15.0%
!!! CTTTTATTAAATGCATTAAA+TGG + Chr5:2659496-2659515 MsG0580024258.01.T01:intron 15.0%
!!! TAAATATTAGCATCATTTTA+TGG - Chr5:2662081-2662100 None:intergenic 15.0%
!!! TTTTAGTAATCAACTAAATT+AGG + Chr5:2661260-2661279 MsG0580024258.01.T01:intron 15.0%
!! AAAAGATACAATTCGAATAT+GGG - Chr5:2664208-2664227 None:intergenic 20.0%
!! AATATTAAACAACGGATAAA+AGG - Chr5:2663157-2663176 None:intergenic 20.0%
!! AATGACCATTGTTAAAATAA+TGG - Chr5:2659628-2659647 None:intergenic 20.0%
!! AATTATTAAAGGGTAAAAAG+GGG + Chr5:2663193-2663212 MsG0580024258.01.T01:intron 20.0%
!! ACAATAAAAAAGACATGTTA+AGG - Chr5:2660360-2660379 None:intergenic 20.0%
!! AGCGAAAAAATATTAAACAA+CGG - Chr5:2663165-2663184 None:intergenic 20.0%
!! ATATATCAACATGACTTAAT+TGG - Chr5:2664388-2664407 None:intergenic 20.0%
!! ATATCATGAAATAATCATAC+AGG - Chr5:2659430-2659449 None:intergenic 20.0%
!! ATATCTCTGTATAAATGATA+GGG + Chr5:2665114-2665133 MsG0580024258.01.T01:intron 20.0%
!! CAATTATTAAAGGGTAAAAA+GGG + Chr5:2663192-2663211 MsG0580024258.01.T01:intron 20.0%
!! GTAAAAAAAAACTATAAGCT+CGG + Chr5:2658350-2658369 MsG0580024258.01.T01:intron 20.0%
!! TAAAAAAAAACTATAAGCTC+GGG + Chr5:2658351-2658370 MsG0580024258.01.T01:intron 20.0%
!! TAAAAATAGTAATTGCAAAG+AGG - Chr5:2664062-2664081 None:intergenic 20.0%
!! TAAAAGATACAATTCGAATA+TGG - Chr5:2664209-2664228 None:intergenic 20.0%
!! TATATCAACATGACTTAATT+GGG - Chr5:2664387-2664406 None:intergenic 20.0%
!! TATATCTCTGTATAAATGAT+AGG + Chr5:2665113-2665132 MsG0580024258.01.T01:intron 20.0%
!! TATGTGGTTTAAATAAACAA+AGG + Chr5:2660469-2660488 MsG0580024258.01.T01:intron 20.0%
!!! AACATATTTAAGACATGTTA+AGG - Chr5:2660426-2660445 None:intergenic 20.0%
!!! AGATTGTTGATGTTTATTTT+AGG + Chr5:2662247-2662266 MsG0580024258.01.T01:intron 20.0%
!!! ATATTGAGTGGTTTTATTTT+TGG - Chr5:2660596-2660615 None:intergenic 20.0%
!!! ATTCGAATTGTATCTTTTAT+GGG + Chr5:2664210-2664229 MsG0580024258.01.T01:CDS 20.0%
!!! ATTTAAAATCTAACAACGTA+AGG + Chr5:2662463-2662482 MsG0580024258.01.T01:intron 20.0%
!!! GGATTAATTTTATCAAAACA+CGG - Chr5:2658250-2658269 None:intergenic 20.0%
!!! TAAGATTGCAACTTTTTATA+TGG - Chr5:2660768-2660787 None:intergenic 20.0%
!!! TACGTTGTTAGATTTTAAAT+TGG - Chr5:2662463-2662482 None:intergenic 20.0%
!!! TATTCGAATTGTATCTTTTA+TGG + Chr5:2664209-2664228 MsG0580024258.01.T01:CDS 20.0%
!!! TATTGAGTGGTTTTATTTTT+GGG - Chr5:2660595-2660614 None:intergenic 20.0%
!!! TCTTTGCAATTACTATTTTT+AGG + Chr5:2664061-2664080 MsG0580024258.01.T01:CDS 20.0%
!!! TGAACATTGATTAAATTGAA+TGG + Chr5:2663747-2663766 MsG0580024258.01.T01:intron 20.0%
!!! TTGGTAAAGTATTTTTGTTT+TGG - Chr5:2661878-2661897 None:intergenic 20.0%
!!! TTTCCTCTTTTTTCTTAAAT+GGG - Chr5:2661064-2661083 None:intergenic 20.0%
!!! TTTTCCTCTTTTTTCTTAAA+TGG - Chr5:2661065-2661084 None:intergenic 20.0%
!!! TTTTGTTTATATGAGCTTAT+TGG + Chr5:2658677-2658696 MsG0580024258.01.T01:intron 20.0%
!!! TTTTTAAAGGAAATTGAGAT+TGG - Chr5:2661910-2661929 None:intergenic 20.0%
! AAATAAGCTGTTTATCCAAA+TGG + Chr5:2658627-2658646 MsG0580024258.01.T01:intron 25.0%
! AACATGTAAACATATCACAA+TGG - Chr5:2661312-2661331 None:intergenic 25.0%
! AACCACTTTACTATCTAAAT+TGG - Chr5:2663545-2663564 None:intergenic 25.0%
! AAGATGTTATTACAAGCATA+TGG - Chr5:2660035-2660054 None:intergenic 25.0%
! AAGATTAGAATGAGAAAATG+AGG - Chr5:2662900-2662919 None:intergenic 25.0%
! AATAAGCTGTTTATCCAAAT+GGG + Chr5:2658628-2658647 MsG0580024258.01.T01:intron 25.0%
! AATAATACACTCATTAATCG+TGG - Chr5:2661679-2661698 None:intergenic 25.0%
! AATATTAAGCATTAGTGTAG+GGG + Chr5:2660611-2660630 MsG0580024258.01.T01:intron 25.0%
! AATTAACTGTACAAGAAAGT+AGG - Chr5:2661242-2661261 None:intergenic 25.0%
! AATTAGTGAATAGGTTAGTA+TGG - Chr5:2661967-2661986 None:intergenic 25.0%
! AATTGATATATGAACCTACA+GGG + Chr5:2658796-2658815 MsG0580024258.01.T01:intron 25.0%
! ACATGTAAACATATCACAAT+GGG - Chr5:2661311-2661330 None:intergenic 25.0%
! ACTATCATGAATGAACTTTA+TGG + Chr5:2658161-2658180 MsG0580024258.01.T01:exon 25.0%
! AGATTTACTCATTTAACCAT+TGG + Chr5:2665168-2665187 MsG0580024258.01.T01:intron 25.0%
! ATCTACAATACAGTATTTGT+CGG - Chr5:2661188-2661207 None:intergenic 25.0%
! ATTTCAATTTCAATTAGGGA+AGG - Chr5:2660830-2660849 None:intergenic 25.0%
! CAAAATAAGCAAATCCAAAA+GGG - Chr5:2666176-2666195 None:intergenic 25.0%
! CAATATTAAGCATTAGTGTA+GGG + Chr5:2660610-2660629 MsG0580024258.01.T01:intron 25.0%
! CCAATTATTAAAGGGTAAAA+AGG + Chr5:2663191-2663210 MsG0580024258.01.T01:intron 25.0%
! GAAAAATTCAGCCAAAATAT+GGG + Chr5:2661394-2661413 MsG0580024258.01.T01:intron 25.0%
! GAACTCAAAGTTAAATACTA+TGG - Chr5:2658776-2658795 None:intergenic 25.0%
! GATTTACTCATTTAACCATT+GGG + Chr5:2665169-2665188 MsG0580024258.01.T01:intron 25.0%
! TAAAAAAGATAACTAGTGGA+AGG - Chr5:2665319-2665338 None:intergenic 25.0%
! TAAAACTACAGTCAATAATC+TGG - Chr5:2663712-2663731 None:intergenic 25.0%
! TAATCGAGGATTATTACTTA+CGG - Chr5:2658004-2658023 None:intergenic 25.0%
! TAGGTAAAAAAGATAACTAG+TGG - Chr5:2665323-2665342 None:intergenic 25.0%
! TCAAAATAAGCAAATCCAAA+AGG - Chr5:2666177-2666196 None:intergenic 25.0%
! TCAATATTAAGCATTAGTGT+AGG + Chr5:2660609-2660628 MsG0580024258.01.T01:intron 25.0%
! TCTTCAGATTGTATAGTAAA+AGG - Chr5:2658831-2658850 None:intergenic 25.0%
! TGAAAAATTCAGCCAAAATA+TGG + Chr5:2661393-2661412 MsG0580024258.01.T01:intron 25.0%
! TGAAACATTTGATACAAACA+TGG + Chr5:2664274-2664293 MsG0580024258.01.T01:CDS 25.0%
! TGAGTCTGTTATTCATTATT+TGG - Chr5:2663106-2663125 None:intergenic 25.0%
! TGTTAATTAAGGCTTTACAT+TGG + Chr5:2664127-2664146 MsG0580024258.01.T01:CDS 25.0%
! TGTTATTCATTATTTGGCAA+TGG - Chr5:2663100-2663119 None:intergenic 25.0%
! TTCTGATCATATCATATTCT+TGG + Chr5:2659733-2659752 MsG0580024258.01.T01:intron 25.0%
! TTTCACATCTGTTTACTATT+CGG + Chr5:2664832-2664851 MsG0580024258.01.T01:intron 25.0%
!! AAAAAAGGAAGATTAGTTGT+TGG + Chr5:2663336-2663355 MsG0580024258.01.T01:intron 25.0%
!! ACCATTGTTAAAATAATGGA+TGG - Chr5:2659624-2659643 None:intergenic 25.0%
!! CATTGATTAAATTGAATGGT+TGG + Chr5:2663751-2663770 MsG0580024258.01.T01:intron 25.0%
!! CCTTTTTACCCTTTAATAAT+TGG - Chr5:2663194-2663213 None:intergenic 25.0%
!! CTGTAATTGAATTTTCGAAA+CGG + Chr5:2658061-2658080 MsG0580024258.01.T01:intron 25.0%
!! CTTTTTATATGGACAGTAAA+TGG - Chr5:2660757-2660776 None:intergenic 25.0%
!! TATGTTTTCTCCATACTATT+TGG + Chr5:2660440-2660459 MsG0580024258.01.T01:intron 25.0%
!! TGTTTTATAAGCTATCTTGA+AGG - Chr5:2658504-2658523 None:intergenic 25.0%
!! TTGATGGTTACTATATTGTA+TGG - Chr5:2662038-2662057 None:intergenic 25.0%
!! TTGCACTTAAATCTAGTTTA+CGG + Chr5:2665192-2665211 MsG0580024258.01.T01:intron 25.0%
!! TTGCTTTGTCAATTTAACTT+GGG + Chr5:2665971-2665990 MsG0580024258.01.T01:intron 25.0%
!! TTTTAAGCAAGAAATAATCG+AGG - Chr5:2658018-2658037 None:intergenic 25.0%
!!! AAGTTTTGATGAATAGATGA+AGG + Chr5:2659888-2659907 MsG0580024258.01.T01:intron 25.0%
!!! ACTTACTAAAAAGGTATTCT+TGG + Chr5:2663972-2663991 MsG0580024258.01.T01:intron 25.0%
!!! AGAATAGTGTCTTATTTTGA+TGG - Chr5:2662054-2662073 None:intergenic 25.0%
!!! CAATATCATCAGAGTTTTTT+TGG + Chr5:2664470-2664489 MsG0580024258.01.T01:intron 25.0%
!!! CATTTTTTCATGTCATTTCA+AGG - Chr5:2658271-2658290 None:intergenic 25.0%
!!! CTTACTAAAAAGGTATTCTT+GGG + Chr5:2663973-2663992 MsG0580024258.01.T01:intron 25.0%
!!! CTTAGACGAAGTTATTTTTT+AGG + Chr5:2662163-2662182 MsG0580024258.01.T01:intron 25.0%
!!! GGTTTTATTTTTGGGTTTTT+TGG - Chr5:2660587-2660606 None:intergenic 25.0%
!!! GTAATCTATTTCTATAGCAA+AGG - Chr5:2658565-2658584 None:intergenic 25.0%
!!! TCCATCCATTATTTTAACAA+TGG + Chr5:2659620-2659639 MsG0580024258.01.T01:intron 25.0%
!!! TTTTTTTTACCATCAATGTG+TGG + Chr5:2661998-2662017 MsG0580024258.01.T01:intron 25.0%
AAATGCTATCTAGAAGAAGA+AGG - Chr5:2664239-2664258 None:intergenic 30.0%
AACTTCCACAATTAGTGAAT+AGG - Chr5:2661976-2661995 None:intergenic 30.0%
AAGCTATTGGTGTATTGAAA+AGG + Chr5:2660146-2660165 MsG0580024258.01.T01:intron 30.0%
AATCAAATTACGCAATACCT+AGG + Chr5:2664736-2664755 MsG0580024258.01.T01:intron 30.0%
AATCGAGGATTATTACTTAC+GGG - Chr5:2658003-2658022 None:intergenic 30.0%
AATGGAAATTACTGAGACAA+TGG - Chr5:2663082-2663101 None:intergenic 30.0%
AATTAAGGCTTTACATTGGT+TGG + Chr5:2664131-2664150 MsG0580024258.01.T01:CDS 30.0%
AATTCGAATATGGGATAATG+TGG - Chr5:2664199-2664218 None:intergenic 30.0%
ACCAAAACACACAAGTATAA+AGG - Chr5:2664866-2664885 None:intergenic 30.0%
ACGTAATTGACAATGATACT+TGG + Chr5:2665215-2665234 MsG0580024258.01.T01:intron 30.0%
ACTAACCTATTCACTAATTG+TGG + Chr5:2661968-2661987 MsG0580024258.01.T01:intron 30.0%
AGTTGATCTATCAGAAACTA+TGG + Chr5:2665352-2665371 MsG0580024258.01.T01:intron 30.0%
ATAAGCTGTTTATCCAAATG+GGG + Chr5:2658629-2658648 MsG0580024258.01.T01:intron 30.0%
ATACTCATCTTTACTTGTAC+AGG + Chr5:2660861-2660880 MsG0580024258.01.T01:intron 30.0%
ATTATTTAATTCCGTTGCGA+TGG + Chr5:2663216-2663235 MsG0580024258.01.T01:intron 30.0%
ATTCAAACATAGGTGATCAT+AGG - Chr5:2663406-2663425 None:intergenic 30.0%
CAATGAATGAATGTCAACAA+TGG - Chr5:2657757-2657776 None:intergenic 30.0%
CAATTGATATATGAACCTAC+AGG + Chr5:2658795-2658814 MsG0580024258.01.T01:intron 30.0%
CACTAATGCTTAATATTGAG+TGG - Chr5:2660608-2660627 None:intergenic 30.0%
CACTTTACTATCTAAATTGG+CGG - Chr5:2663542-2663561 None:intergenic 30.0%
CATACAAGATCCAAATAGTA+TGG - Chr5:2660453-2660472 None:intergenic 30.0%
CCAAAACACACAAGTATAAA+GGG - Chr5:2664865-2664884 None:intergenic 30.0%
CGTAATTGACAATGATACTT+GGG + Chr5:2665216-2665235 MsG0580024258.01.T01:intron 30.0%
CTCAGCTACCAATTATTAAA+GGG + Chr5:2663183-2663202 MsG0580024258.01.T01:intron 30.0%
CTTGCTTTGTCAATTTAACT+TGG + Chr5:2665970-2665989 MsG0580024258.01.T01:intron 30.0%
GATCCCATTTAAGAAAAAAG+AGG + Chr5:2661058-2661077 MsG0580024258.01.T01:intron 30.0%
GTAATTGACAATGATACTTG+GGG + Chr5:2665217-2665236 MsG0580024258.01.T01:intron 30.0%
GTGAAAACATATTCCTTACT+TGG - Chr5:2660338-2660357 None:intergenic 30.0%
GTTATAGAAAGAAACTAACC+AGG - Chr5:2658203-2658222 None:intergenic 30.0%
TAAAAAATCCCCAACGATAT+TGG + Chr5:2661424-2661443 MsG0580024258.01.T01:intron 30.0%
TAATAAAAGATGAAACCAGC+AGG - Chr5:2659485-2659504 None:intergenic 30.0%
TAATTATGACGATAGCATCA+AGG + Chr5:2663477-2663496 MsG0580024258.01.T01:intron 30.0%
TACTATTTGGATCTTGTATG+TGG + Chr5:2660453-2660472 MsG0580024258.01.T01:intron 30.0%
TACTTGGTATGTACAAAAAC+AGG - Chr5:2660322-2660341 None:intergenic 30.0%
TATCATACTTCTTGATACAC+AGG + Chr5:2658911-2658930 MsG0580024258.01.T01:CDS 30.0%
TCAACAATTTCTTTGCTGAA+TGG + Chr5:2659087-2659106 MsG0580024258.01.T01:CDS 30.0%
TCAGATTGTATAGTAAAAGG+TGG - Chr5:2658828-2658847 None:intergenic 30.0%
TCTACAATACAGTATTTGTC+GGG - Chr5:2661187-2661206 None:intergenic 30.0%
TGATACTATATGAAACCAAG+TGG + Chr5:2659590-2659609 MsG0580024258.01.T01:intron 30.0%
TTATTTAATTCCGTTGCGAT+GGG + Chr5:2663217-2663236 MsG0580024258.01.T01:intron 30.0%
TTCACATAATGATCATGTCA+TGG + Chr5:2664412-2664431 MsG0580024258.01.T01:intron 30.0%
TTTGATGAATAGATGAAGGT+TGG + Chr5:2659892-2659911 MsG0580024258.01.T01:intron 30.0%
! ACTAAAAAGCGTGTTATCTT+TGG + Chr5:2662121-2662140 MsG0580024258.01.T01:intron 30.0%
! ACTTATGGTGTTAAAGCTAT+TGG + Chr5:2660133-2660152 MsG0580024258.01.T01:intron 30.0%
! CACTGCATTGTTGTTAATTA+AGG + Chr5:2664116-2664135 MsG0580024258.01.T01:CDS 30.0%
! GACCTGTTTAGAAACAATTT+TGG - Chr5:2658655-2658674 None:intergenic 30.0%
! GTGTTATCTTTGGTTCAATA+TGG + Chr5:2662131-2662150 MsG0580024258.01.T01:intron 30.0%
! GTTTTTGTACATACCAAGTA+AGG + Chr5:2660322-2660341 MsG0580024258.01.T01:intron 30.0%
! TAATTTTCGTCGAGAATCTA+CGG - Chr5:2663263-2663282 None:intergenic 30.0%
! TAGATCAACTTCAAGTTAGT+AGG - Chr5:2665342-2665361 None:intergenic 30.0%
! TATTTAAAACCTTATCTGCC+AGG + Chr5:2663512-2663531 MsG0580024258.01.T01:intron 30.0%
! TTTAACCTGTTCCCATATTT+TGG - Chr5:2661408-2661427 None:intergenic 30.0%
!! AAAACAGAAGCACTAAATAC+AGG - Chr5:2659039-2659058 None:intergenic 30.0%
!! AAAGAAACTAAGGCTTTGTT+TGG - Chr5:2658743-2658762 None:intergenic 30.0%
!! AATACTGATTTCACTGTCAT+TGG + Chr5:2658101-2658120 MsG0580024258.01.T01:five_prime_UTR 30.0%
!! ACGACTAGTTATTTTGTTAG+TGG - Chr5:2659790-2659809 None:intergenic 30.0%
!! ATTTTGACAGATCTGTTTCT+GGG + Chr5:2660064-2660083 MsG0580024258.01.T01:intron 30.0%
!! TGATGTACTTGTTATCATGT+AGG + Chr5:2660177-2660196 MsG0580024258.01.T01:intron 30.0%
!!! ATCAGAGTTTTTTTGGCATA+GGG + Chr5:2664477-2664496 MsG0580024258.01.T01:intron 30.0%
!!! TATCTTGTTTTTGTGTCAAC+TGG + Chr5:2659673-2659692 MsG0580024258.01.T01:intron 30.0%
!!! TGCAATTACTATTTTTAGGC+AGG + Chr5:2664065-2664084 MsG0580024258.01.T01:CDS 30.0%
!!! TGGCAGATAAGGTTTTAAAT+AGG - Chr5:2663513-2663532 None:intergenic 30.0%
!!! TTTCAAACCATCCTCTTTTT+TGG + Chr5:2660946-2660965 MsG0580024258.01.T01:intron 30.0%
AAATTTCTGACTTCTTTCGC+TGG + Chr5:2659856-2659875 MsG0580024258.01.T01:intron 35.0%
AAGAAATAAGTGTCTGCACA+AGG - Chr5:2660107-2660126 None:intergenic 35.0%
AAGTGAAGCTAACAAAAGCA+AGG - Chr5:2661749-2661768 None:intergenic 35.0%
AATTAGTGTGTCAGAATCCA+AGG - Chr5:2661031-2661050 None:intergenic 35.0%
AATTTGGTTAGTGAAGTCCT+TGG + Chr5:2659553-2659572 MsG0580024258.01.T01:intron 35.0%
ACATTTGATACAAACATGGC+AGG + Chr5:2664278-2664297 MsG0580024258.01.T01:CDS 35.0%
ACGAAGCATGTGGTTTATTA+GGG - Chr5:2663578-2663597 None:intergenic 35.0%
ACGAGAGAAACAACAAAACA+AGG - Chr5:2662925-2662944 None:intergenic 35.0%
ACGATCCAAGATTCAAACAT+AGG - Chr5:2663416-2663435 None:intergenic 35.0%
ACGATCCTTCAATTTCCAAT+CGG + Chr5:2662872-2662891 MsG0580024258.01.T01:intron 35.0%
AGAAATTGTTGAAGAGCCAT+CGG - Chr5:2659079-2659098 None:intergenic 35.0%
AGCAAAAAATTGAGCTCAGA+AGG - Chr5:2659528-2659547 None:intergenic 35.0%
AGGAGGTAGAAATTTCTTGA+AGG + Chr5:2661482-2661501 MsG0580024258.01.T01:intron 35.0%
AGGTGAAAACATTTCTCACT+TGG - Chr5:2660406-2660425 None:intergenic 35.0%
ATAACAGACTCAGTAGTTTG+TGG + Chr5:2663114-2663133 MsG0580024258.01.T01:intron 35.0%
ATCGAGGATTATTACTTACG+GGG - Chr5:2658002-2658021 None:intergenic 35.0%
ATCTGAAGAGAATAGAGCTA+TGG + Chr5:2658842-2658861 MsG0580024258.01.T01:CDS 35.0%
ATCTGTATGTCATATTCTGC+TGG + Chr5:2659294-2659313 MsG0580024258.01.T01:intron 35.0%
ATGAATCAGAGAGAAGATTG+AGG - Chr5:2657954-2657973 None:intergenic 35.0%
ATTAGTGTGTCAGAATCCAA+GGG - Chr5:2661030-2661049 None:intergenic 35.0%
ATTGGAAATTGAAGGATCGT+CGG - Chr5:2662872-2662891 None:intergenic 35.0%
ATTTCAATTAGGGAAGGAAG+TGG - Chr5:2660824-2660843 None:intergenic 35.0%
CAAATCATCGATCGAAACAA+TGG + Chr5:2657783-2657802 MsG0580024258.01.T01:five_prime_UTR 35.0%
CAATCTTCTCTCTGATTCAT+GGG + Chr5:2657954-2657973 MsG0580024258.01.T01:five_prime_UTR 35.0%
CATTGTTTCGATCGATGATT+TGG - Chr5:2657785-2657804 None:intergenic 35.0%
CGCCAATTTAGATAGTAAAG+TGG + Chr5:2663540-2663559 MsG0580024258.01.T01:intron 35.0%
CTAAAAATTGTTTGCAGCTG+AGG + Chr5:2660906-2660925 MsG0580024258.01.T01:CDS 35.0%
CTATGTCACTGACATACTTA+TGG + Chr5:2664962-2664981 MsG0580024258.01.T01:intron 35.0%
CTCACTAGCTATAAAATTGC+TGG - Chr5:2661600-2661619 None:intergenic 35.0%
CTTGTCAGTAATATGCAAGA+TGG + Chr5:2665862-2665881 MsG0580024258.01.T01:intron 35.0%
GAAAGCAAAGAACAGTGAAA+CGG - Chr5:2664307-2664326 None:intergenic 35.0%
GAAGGCAATGAACATGAAAA+AGG - Chr5:2665673-2665692 None:intergenic 35.0%
GAATTAGCTCATGACCTTAT+GGG + Chr5:2659126-2659145 MsG0580024258.01.T01:CDS 35.0%
GATAATCACTCACTGTATGT+AGG + Chr5:2665824-2665843 MsG0580024258.01.T01:intron 35.0%
GATCACCTATGTTTGAATCT+TGG + Chr5:2663408-2663427 MsG0580024258.01.T01:intron 35.0%
GCTCAGCTACCAATTATTAA+AGG + Chr5:2663182-2663201 MsG0580024258.01.T01:intron 35.0%
GTCATTGGAGTTATTGGATT+TGG + Chr5:2658116-2658135 MsG0580024258.01.T01:five_prime_UTR 35.0%
GTTTCAGTGATGTTGAATGT+CGG + Chr5:2663449-2663468 MsG0580024258.01.T01:intron 35.0%
TAACTCGTAAAACAACACAC+TGG + Chr5:2661941-2661960 MsG0580024258.01.T01:intron 35.0%
TACAGTACTCCAATATCGTT+GGG - Chr5:2661436-2661455 None:intergenic 35.0%
TACCATGCATTTAACAGTAG+AGG + Chr5:2663854-2663873 MsG0580024258.01.T01:CDS 35.0%
TAGATTTAAGTGCAACCCAA+TGG - Chr5:2665187-2665206 None:intergenic 35.0%
TAGGAGGAAAAGGAATAAGA+AGG - Chr5:2664337-2664356 None:intergenic 35.0%
TATTTAATTCCGTTGCGATG+GGG + Chr5:2663218-2663237 MsG0580024258.01.T01:intron 35.0%
TCAATCTTCTCTCTGATTCA+TGG + Chr5:2657953-2657972 MsG0580024258.01.T01:five_prime_UTR 35.0%
TCAATTGTCATGGAAACACA+AGG - Chr5:2660727-2660746 None:intergenic 35.0%
TCGACGAAAATTAGTAACTG+CGG + Chr5:2663270-2663289 MsG0580024258.01.T01:intron 35.0%
TCTGTGGCAACTTACTAAAA+AGG + Chr5:2663963-2663982 MsG0580024258.01.T01:intron 35.0%
TGAAGCAAGAATGTATGTTC+AGG + Chr5:2663686-2663705 MsG0580024258.01.T01:intron 35.0%
TGAATCAGAGAGAAGATTGA+GGG - Chr5:2657953-2657972 None:intergenic 35.0%
TGAATTAGCTCATGACCTTA+TGG + Chr5:2659125-2659144 MsG0580024258.01.T01:CDS 35.0%
TGCTTCTTCTTAACATGGTT+TGG + Chr5:2663927-2663946 MsG0580024258.01.T01:intron 35.0%
TGGTTATTATGTGTGTTCTG+TGG + Chr5:2663947-2663966 MsG0580024258.01.T01:intron 35.0%
TGTTTACCTGAATACCCATA+AGG - Chr5:2659143-2659162 None:intergenic 35.0%
TTCAACTTCCAAGATCAGTT+TGG + Chr5:2663904-2663923 MsG0580024258.01.T01:CDS 35.0%
TTCACTGTCATTGGAGTTAT+TGG + Chr5:2658110-2658129 MsG0580024258.01.T01:five_prime_UTR 35.0%
TTGAGATTGGAACTGACTAT+TGG - Chr5:2661897-2661916 None:intergenic 35.0%
TTGTTTGTCATGAAGCATGT+TGG - Chr5:2662571-2662590 None:intergenic 35.0%
TTTCAGTGATGTTGAATGTC+GGG + Chr5:2663450-2663469 MsG0580024258.01.T01:intron 35.0%
TTTCTACCTCCTATACATAC+CGG - Chr5:2661474-2661493 None:intergenic 35.0%
! AAAGAAGAAGCACAGATACA+TGG - Chr5:2665056-2665075 None:intergenic 35.0%
! AATTTTCGTCGAGAATCTAC+GGG - Chr5:2663262-2663281 None:intergenic 35.0%
! AGATTTTCGACTATTGGCAA+AGG + Chr5:2660551-2660570 MsG0580024258.01.T01:intron 35.0%
! AGCATTGCTATAGCTTTTAC+AGG - Chr5:2661629-2661648 None:intergenic 35.0%
! AGGAAGATTAGTTGTTGGTA+AGG + Chr5:2663341-2663360 MsG0580024258.01.T01:intron 35.0%
! ATTTTACCTCGACCTTGTTA+GGG + Chr5:2665015-2665034 MsG0580024258.01.T01:intron 35.0%
! CCCTTTATACTTGTGTGTTT+TGG + Chr5:2664862-2664881 MsG0580024258.01.T01:intron 35.0%
! CTCAGCTGCAAACAATTTTT+AGG - Chr5:2660908-2660927 None:intergenic 35.0%
! TCTTAGTTTGATGGCAACTT+TGG + Chr5:2663823-2663842 MsG0580024258.01.T01:CDS 35.0%
! TGATGATGAATACCGCAAAT+CGG + Chr5:2662784-2662803 MsG0580024258.01.T01:intron 35.0%
! TGCAGAAGATTTTCGACTAT+TGG + Chr5:2660545-2660564 MsG0580024258.01.T01:intron 35.0%
! TTTCTTGGATTTCCGATTTG+CGG - Chr5:2662799-2662818 None:intergenic 35.0%
! TTTTTACCATCAATGTGTGG+TGG + Chr5:2662001-2662020 MsG0580024258.01.T01:intron 35.0%
!! ATATGCTGGTCTTAGTTTGA+TGG + Chr5:2663814-2663833 MsG0580024258.01.T01:CDS 35.0%
!! ATTTCTGCTCTGGAAATTAC+GGG + Chr5:2661110-2661129 MsG0580024258.01.T01:intron 35.0%
!! ATTTTACTGATTGCTGTGTC+TGG + Chr5:2659213-2659232 MsG0580024258.01.T01:intron 35.0%
!! CATTTCTGCTCTGGAAATTA+CGG + Chr5:2661109-2661128 MsG0580024258.01.T01:intron 35.0%
!! CATTTTGACAGATCTGTTTC+TGG + Chr5:2660063-2660082 MsG0580024258.01.T01:intron 35.0%
!! GGCCAAAATTGTTTCTAAAC+AGG + Chr5:2658650-2658669 MsG0580024258.01.T01:intron 35.0%
!! TGGTGTGATTTTTGTTGTGT+AGG + Chr5:2663771-2663790 MsG0580024258.01.T01:intron 35.0%
!! TGTTTTGGATTTCGCATAGA+GGG - Chr5:2661863-2661882 None:intergenic 35.0%
!! TTGTCAATTTAACTTGGGAC+AGG + Chr5:2665976-2665995 MsG0580024258.01.T01:intron 35.0%
!! TTTGGTGCTTCTTCTTAACA+TGG + Chr5:2663922-2663941 MsG0580024258.01.T01:intron 35.0%
!!! CATCAGAGTTTTTTTGGCAT+AGG + Chr5:2664476-2664495 MsG0580024258.01.T01:intron 35.0%
!!! GTGTCCACATATCAGTTTTT+TGG - Chr5:2665651-2665670 None:intergenic 35.0%
!!! TTGCTTATTTTGAGCTTGTG+CGG + Chr5:2666184-2666203 MsG0580024258.01.T01:CDS 35.0%
!!! TTGTTTTGGATTTCGCATAG+AGG - Chr5:2661864-2661883 None:intergenic 35.0%
AAATTGTTTGCAGCTGAGGA+AGG + Chr5:2660910-2660929 MsG0580024258.01.T01:CDS 40.0%
AACTATAAGCTCGGGAGAAA+CGG + Chr5:2658359-2658378 MsG0580024258.01.T01:intron 40.0%
AACTCATCAGTAGGAGGAAA+AGG - Chr5:2664347-2664366 None:intergenic 40.0%
AATATGCCACCACACATTGA+TGG - Chr5:2662010-2662029 None:intergenic 40.0%
AATGCCACAAGCTATCATCA+TGG - Chr5:2659336-2659355 None:intergenic 40.0%
AATTCCCTTGCACCTAATAC+GGG + Chr5:2665375-2665394 MsG0580024258.01.T01:CDS 40.0%
ACAGTACTCCAATATCGTTG+GGG - Chr5:2661435-2661454 None:intergenic 40.0%
ACGCACAGAAGTTCATTCTA+TGG - Chr5:2660685-2660704 None:intergenic 40.0%
ACTTTGAACAACTGTAGCCA+TGG + Chr5:2661765-2661784 MsG0580024258.01.T01:intron 40.0%
AGAGGCTTAATGAGCAATCA+TGG + Chr5:2664019-2664038 MsG0580024258.01.T01:CDS 40.0%
AGGAAGGAACTACTCTTTCT+TGG - Chr5:2662814-2662833 None:intergenic 40.0%
AGTATGAGCAACTCATCAGT+AGG - Chr5:2664356-2664375 None:intergenic 40.0%
AGTTCCTGAGTTCGAATACA+TGG + Chr5:2660291-2660310 MsG0580024258.01.T01:CDS 40.0%
ATAAGTTCTGCGAGACTGTT+TGG + Chr5:2658415-2658434 MsG0580024258.01.T01:intron 40.0%
ATAGTAGATTTGCCAACTCC+AGG - Chr5:2658146-2658165 None:intergenic 40.0%
ATCATCGATCGAAACAATGG+CGG + Chr5:2657786-2657805 MsG0580024258.01.T01:five_prime_UTR 40.0%
ATCCATGACCTTTCTGATTG+TGG + Chr5:2661723-2661742 MsG0580024258.01.T01:intron 40.0%
ATCTAAATTGGCGGAAAACC+TGG - Chr5:2663533-2663552 None:intergenic 40.0%
ATGAGCTAATTCAGCTGACA+AGG - Chr5:2659118-2659137 None:intergenic 40.0%
ATGAGGTTGAAGACATATGC+TGG + Chr5:2663800-2663819 MsG0580024258.01.T01:CDS 40.0%
ATGTTCATTGCCTTCGATCA+TGG + Chr5:2665678-2665697 MsG0580024258.01.T01:CDS 40.0%
ATTCTTGGGTAATCTTCGAG+AGG + Chr5:2663987-2664006 MsG0580024258.01.T01:CDS 40.0%
ATTTAATTCCGTTGCGATGG+GGG + Chr5:2663219-2663238 MsG0580024258.01.T01:intron 40.0%
CACAATCATGGTCATCAACA+GGG + Chr5:2665789-2665808 MsG0580024258.01.T01:CDS 40.0%
CACGAAGCATGTGGTTTATT+AGG - Chr5:2663579-2663598 None:intergenic 40.0%
CAGTGTTCTCTCCAAAAAAG+AGG - Chr5:2660960-2660979 None:intergenic 40.0%
CATGCTCATTTACTCGAACA+AGG + Chr5:2661825-2661844 MsG0580024258.01.T01:intron 40.0%
CTACAGTACTCCAATATCGT+TGG - Chr5:2661437-2661456 None:intergenic 40.0%
CTCACGTGTCAAACTGTAAT+TGG + Chr5:2662712-2662731 MsG0580024258.01.T01:intron 40.0%
CTGGTGAATGTGATTGTGTT+GGG + Chr5:2659232-2659251 MsG0580024258.01.T01:intron 40.0%
CTTGTGGCATTTAATGTCGA+CGG + Chr5:2659345-2659364 MsG0580024258.01.T01:intron 40.0%
CTTGTTCGAGTAAATGAGCA+TGG - Chr5:2661827-2661846 None:intergenic 40.0%
GAAATTGTTGAAGAGCCATC+GGG - Chr5:2659078-2659097 None:intergenic 40.0%
GAATTCCCTTGCACCTAATA+CGG + Chr5:2665374-2665393 MsG0580024258.01.T01:CDS 40.0%
GCAGCCAAAAAACTGATATG+TGG + Chr5:2665644-2665663 MsG0580024258.01.T01:CDS 40.0%
GCTAGAGTTCTGTGAAATAG+AGG - Chr5:2660248-2660267 None:intergenic 40.0%
GCTTAATGAGCAATCATGGA+GGG + Chr5:2664023-2664042 MsG0580024258.01.T01:CDS 40.0%
GTACCGTACAAAAGAAGTTG+CGG - Chr5:2666130-2666149 None:intergenic 40.0%
GTCACTGACATACTTATGGA+GGG + Chr5:2664966-2664985 MsG0580024258.01.T01:intron 40.0%
GTTATTGGATTTGGATCACC+TGG + Chr5:2658125-2658144 MsG0580024258.01.T01:five_prime_UTR 40.0%
GTTCTCTCCAAAAAAGAGGA+TGG - Chr5:2660956-2660975 None:intergenic 40.0%
GTTGAAAGATACACCATTGC+CGG - Chr5:2663890-2663909 None:intergenic 40.0%
GTTTGACACGTGAGTTTGTA+TGG - Chr5:2662706-2662725 None:intergenic 40.0%
TAACTCTCATGTTGAGCTCT+TGG - Chr5:2661089-2661108 None:intergenic 40.0%
TAAGTTCTGCGAGACTGTTT+GGG + Chr5:2658416-2658435 MsG0580024258.01.T01:intron 40.0%
TACCGTACAAAAGAAGTTGC+GGG - Chr5:2666129-2666148 None:intergenic 40.0%
TATTACTTACGGGGAGAAAG+CGG - Chr5:2657993-2658012 None:intergenic 40.0%
TCAAAGCTCAAAGCTGACAA+GGG - Chr5:2659934-2659953 None:intergenic 40.0%
TCACAATCATGGTCATCAAC+AGG + Chr5:2665788-2665807 MsG0580024258.01.T01:CDS 40.0%
TCATGACCTTATGGGTATTC+AGG + Chr5:2659134-2659153 MsG0580024258.01.T01:CDS 40.0%
TCGAGGTAAAATGTGAAGAC+TGG - Chr5:2665007-2665026 None:intergenic 40.0%
TCTGGTGAATGTGATTGTGT+TGG + Chr5:2659231-2659250 MsG0580024258.01.T01:intron 40.0%
TGAGAGTTACATTTCTGCTC+TGG + Chr5:2661100-2661119 MsG0580024258.01.T01:intron 40.0%
TGGAAGTCTGTCAATTGTCA+TGG - Chr5:2660737-2660756 None:intergenic 40.0%
TGGATGGATCTTTAACCACT+TGG - Chr5:2659608-2659627 None:intergenic 40.0%
TGTATGTCATATTCTGCTGG+TGG + Chr5:2659297-2659316 MsG0580024258.01.T01:intron 40.0%
TGTCACTGACATACTTATGG+AGG + Chr5:2664965-2664984 MsG0580024258.01.T01:intron 40.0%
TGTTGTGTAGGAACATGATG+AGG + Chr5:2663783-2663802 MsG0580024258.01.T01:intron 40.0%
TTCAAAACTGTTATGCCTGC+TGG + Chr5:2659467-2659486 MsG0580024258.01.T01:intron 40.0%
TTCAACACTCCGGTATGTAT+AGG + Chr5:2661462-2661481 MsG0580024258.01.T01:intron 40.0%
TTCAGCCAAAATATGGGAAC+AGG + Chr5:2661400-2661419 MsG0580024258.01.T01:intron 40.0%
TTGTCATGGAAACACAAGGT+CGG - Chr5:2660723-2660742 None:intergenic 40.0%
! AGCAGTTGTTCCATTTTCTG+GGG - Chr5:2665750-2665769 None:intergenic 40.0%
! ATTTCACAGAACTCTAGCTC+AGG + Chr5:2660250-2660269 MsG0580024258.01.T01:CDS 40.0%
! CAGCAGTTGTTCCATTTTCT+GGG - Chr5:2665751-2665770 None:intergenic 40.0%
! CATTTTACCTCGACCTTGTT+AGG + Chr5:2665014-2665033 MsG0580024258.01.T01:intron 40.0%
! CTTGAAGGTACAACAGTTCT+AGG + Chr5:2661497-2661516 MsG0580024258.01.T01:intron 40.0%
! GCAACTTCTTTTGTACGGTA+CGG + Chr5:2666129-2666148 MsG0580024258.01.T01:CDS 40.0%
! TATGAAGCGTCTGCAAACAT+CGG - Chr5:2659395-2659414 None:intergenic 40.0%
! TGGCATTGAACCTAGGATAT+CGG + Chr5:2658881-2658900 MsG0580024258.01.T01:CDS 40.0%
! TTTCACAGAACTCTAGCTCA+GGG + Chr5:2660251-2660270 MsG0580024258.01.T01:CDS 40.0%
!! AAGAAGCACCAAACTGATCT+TGG - Chr5:2663915-2663934 None:intergenic 40.0%
!! AAGCTCTCTGTTTCTATCTC+AGG + Chr5:2664889-2664908 MsG0580024258.01.T01:intron 40.0%
!! AGGTACCGATTGGAAATTGA+AGG - Chr5:2662880-2662899 None:intergenic 40.0%
!! ATACATACCGGAGTGTTGAA+GGG - Chr5:2661462-2661481 None:intergenic 40.0%
!! GAAACAATTTTGGCCCCATT+TGG - Chr5:2658645-2658664 None:intergenic 40.0%
!! GCGTCGATCAATTTCAAGTT+AGG + Chr5:2662979-2662998 MsG0580024258.01.T01:intron 40.0%
!! TATACATACCGGAGTGTTGA+AGG - Chr5:2661463-2661482 None:intergenic 40.0%
!! TGAGAAAATGAGGTACCGAT+TGG - Chr5:2662890-2662909 None:intergenic 40.0%
!!! CTCTTTTTTGGAGAGAACAC+TGG + Chr5:2660958-2660977 MsG0580024258.01.T01:intron 40.0%
!!! GGTTTTGATTCAACTTCTCC+TGG + Chr5:2658182-2658201 MsG0580024258.01.T01:CDS 40.0%
AACACTCCGGTATGTATAGG+AGG + Chr5:2661465-2661484 MsG0580024258.01.T01:intron 45.0%
AAGATCCTTCTAGCAAAGCC+AGG + Chr5:2657831-2657850 MsG0580024258.01.T01:five_prime_UTR 45.0%
AAGCAAGGCCACAATCAGAA+AGG - Chr5:2661734-2661753 None:intergenic 45.0%
AATTGAAGGATCGTCGGAGT+TGG - Chr5:2662866-2662885 None:intergenic 45.0%
ACACCATTGCCGGATAAAAC+TGG - Chr5:2663880-2663899 None:intergenic 45.0%
ACATACTTATGGAGGGACAG+TGG + Chr5:2664973-2664992 MsG0580024258.01.T01:intron 45.0%
AGTTGGAACGGAGAAAATGG+TGG - Chr5:2662849-2662868 None:intergenic 45.0%
ATACGTTCAGCCGATATCCT+AGG - Chr5:2658894-2658913 None:intergenic 45.0%
ATAGAGGAAGCCAGCAAAGA+TGG - Chr5:2660232-2660251 None:intergenic 45.0%
ATGAGCAACTCATCAGTAGG+AGG - Chr5:2664353-2664372 None:intergenic 45.0%
ATGGCGAGACATTGTTCTAC+TGG + Chr5:2658861-2658880 MsG0580024258.01.T01:CDS 45.0%
ATTTCCGGATATAGGAGCTC+CGG - Chr5:2657865-2657884 None:intergenic 45.0%
CATTTCAGACCCATCTTTGC+TGG + Chr5:2660219-2660238 MsG0580024258.01.T01:CDS 45.0%
CCATGAAGTCTCCATCTTTC+AGG + Chr5:2661345-2661364 MsG0580024258.01.T01:intron 45.0%
CCTGAAAGATGGAGACTTCA+TGG - Chr5:2661348-2661367 None:intergenic 45.0%
CGCAATACCTAGGCAGATTA+TGG + Chr5:2664746-2664765 MsG0580024258.01.T01:intron 45.0%
CGGCAACTGATAGTTTCAGT+CGG + Chr5:2666037-2666056 MsG0580024258.01.T01:CDS 45.0%
CTCAAAGCTCAAAGCTGACA+AGG - Chr5:2659935-2659954 None:intergenic 45.0%
CTCTGTTACATTCCTTGCGA+TGG + Chr5:2664092-2664111 MsG0580024258.01.T01:CDS 45.0%
CTGAGTAGAATCATCTTCGC+CGG - Chr5:2657902-2657921 None:intergenic 45.0%
CTGTGATCCATAATCTGCCT+AGG - Chr5:2664756-2664775 None:intergenic 45.0%
GAAAATGGAACAACTGCTGC+TGG + Chr5:2665752-2665771 MsG0580024258.01.T01:CDS 45.0%
GAGTCCATGATGATAGCTTG+TGG + Chr5:2659329-2659348 MsG0580024258.01.T01:intron 45.0%
GCACAAGGTGTGTAAGACAA+GGG - Chr5:2660092-2660111 None:intergenic 45.0%
GGCCTCTACTGTTAAATGCA+TGG - Chr5:2663859-2663878 None:intergenic 45.0%
GGCTTAATGAGCAATCATGG+AGG + Chr5:2664022-2664041 MsG0580024258.01.T01:CDS 45.0%
GGCTTTGCTAGAAGGATCTT+TGG - Chr5:2657831-2657850 None:intergenic 45.0%
GGGAGCTATACGAGACATTT+AGG + Chr5:2665395-2665414 MsG0580024258.01.T01:CDS 45.0%
GGGGTATGACATGTAATGTC+CGG - Chr5:2664628-2664647 None:intergenic 45.0%
GTAGCCATGTATTCGAACTC+AGG - Chr5:2660298-2660317 None:intergenic 45.0%
GTGGCAATGCTGAGATTGTT+AGG + Chr5:2663370-2663389 MsG0580024258.01.T01:intron 45.0%
TAATGAGCAATCATGGAGGG+AGG + Chr5:2664026-2664045 MsG0580024258.01.T01:CDS 45.0%
TAATGTGGTCACTGTAGGAG+TGG - Chr5:2664184-2664203 None:intergenic 45.0%
TACGGTACGGCATTTATGCT+CGG + Chr5:2666142-2666161 MsG0580024258.01.T01:CDS 45.0%
TAGAGGAAGCCAGCAAAGAT+GGG - Chr5:2660231-2660250 None:intergenic 45.0%
TAGGGAAGGAAGTGGATACA+AGG - Chr5:2660816-2660835 None:intergenic 45.0%
TCATCGATCGAAACAATGGC+GGG + Chr5:2657787-2657806 MsG0580024258.01.T01:five_prime_UTR 45.0%
TCTCGTATAGCTCCCGTATT+AGG - Chr5:2665390-2665409 None:intergenic 45.0%
TGCACAAGGTGTGTAAGACA+AGG - Chr5:2660093-2660112 None:intergenic 45.0%
TGGGATAATGTGGTCACTGT+AGG - Chr5:2664189-2664208 None:intergenic 45.0%
TGTAGAACCCTTCAACACTC+CGG + Chr5:2661452-2661471 MsG0580024258.01.T01:intron 45.0%
TTGGTTGTACCCCCAGAAAA+TGG + Chr5:2665737-2665756 MsG0580024258.01.T01:CDS 45.0%
! AAGGATCTTTGGAGATGGAG+AGG - Chr5:2657820-2657839 None:intergenic 45.0%
! AGGATCTTTGGAGATGGAGA+GGG - Chr5:2657819-2657838 None:intergenic 45.0%
! CTCCCGCAACTTCTTTTGTA+CGG + Chr5:2666124-2666143 MsG0580024258.01.T01:CDS 45.0%
! GCAGCAGTTGTTCCATTTTC+TGG - Chr5:2665752-2665771 None:intergenic 45.0%
! GCAGTTGTTCCATTTTCTGG+GGG - Chr5:2665749-2665768 None:intergenic 45.0%
! GCTAGAAGGATCTTTGGAGA+TGG - Chr5:2657825-2657844 None:intergenic 45.0%
! GTTCTACTGGCATTGAACCT+AGG + Chr5:2658874-2658893 MsG0580024258.01.T01:CDS 45.0%
! GTTGTTGGTAAGGCTTCAAG+TGG + Chr5:2663351-2663370 MsG0580024258.01.T01:intron 45.0%
!! ATTTAACTTGGGACAGGCAC+TGG + Chr5:2665982-2666001 MsG0580024258.01.T01:intron 45.0%
!! ATTTTCTGGGGGTACAACCA+AGG - Chr5:2665738-2665757 None:intergenic 45.0%
!! CAGTAGAGGCCAGTTTTATC+CGG + Chr5:2663868-2663887 MsG0580024258.01.T01:CDS 45.0%
!! TTAAGAAAAAAATAAAAAAT+TGG - Chr5:2659828-2659847 None:intergenic 5.0%
!!! AATTTTACATATTTTTTAAA+TGG + Chr5:2665573-2665592 MsG0580024258.01.T01:intron 5.0%
!!! TAAAATAAATTAATCATTTT+AGG + Chr5:2662292-2662311 MsG0580024258.01.T01:intron 5.0%
!!! TATTTTTTATTTTTTTTTAC+TGG - Chr5:2662668-2662687 None:intergenic 5.0%
!!! TTTATTTTATTTTTTAGTTT+GGG - Chr5:2663313-2663332 None:intergenic 5.0%
!!! TTTTATTTTATTTTTTAGTT+TGG - Chr5:2663314-2663333 None:intergenic 5.0%
AAAGGTGGTAGCATCCCTGT+AGG - Chr5:2658813-2658832 None:intergenic 50.0%
AAGGATCGTCGGAGTTGGAA+CGG - Chr5:2662861-2662880 None:intergenic 50.0%
AAGTCCTTGGCTGCACTTTC+TGG + Chr5:2659566-2659585 MsG0580024258.01.T01:intron 50.0%
AATGGAACAACTGCTGCTGG+AGG + Chr5:2665755-2665774 MsG0580024258.01.T01:CDS 50.0%
ACAACCAAGGCTCTGCAAGT+AGG - Chr5:2665725-2665744 None:intergenic 50.0%
ACAATGCAGTGACCATCGCA+AGG - Chr5:2664107-2664126 None:intergenic 50.0%
ACGGAGAAAATGGTGGTCGT+CGG - Chr5:2662842-2662861 None:intergenic 50.0%
ACTCACGCATTGAGCTCTTC+AGG - Chr5:2665502-2665521 None:intergenic 50.0%
AGCTCCCGTATTAGGTGCAA+GGG - Chr5:2665382-2665401 None:intergenic 50.0%
AGTACAGGTCAAACCGAGCT+TGG + Chr5:2666006-2666025 MsG0580024258.01.T01:intron 50.0%
AGTGCAGCAAGTCCCTAACA+AGG - Chr5:2665030-2665049 None:intergenic 50.0%
CAACCAAGGCTCTGCAAGTA+GGG - Chr5:2665724-2665743 None:intergenic 50.0%
CGACATCTTCACGAAGCATG+TGG - Chr5:2663588-2663607 None:intergenic 50.0%
CGACCATGTTCCACCTTCTA+TGG + Chr5:2660993-2661012 MsG0580024258.01.T01:intron 50.0%
CGGAGTTGGAACGGAGAAAA+TGG - Chr5:2662852-2662871 None:intergenic 50.0%
CGTACAAAAGAAGTTGCGGG+AGG - Chr5:2666126-2666145 None:intergenic 50.0%
CTCACGCATTGAGCTCTTCA+GGG - Chr5:2665501-2665520 None:intergenic 50.0%
CTTCCATGCACCATAGAAGG+TGG - Chr5:2661006-2661025 None:intergenic 50.0%
GAGAAGATTGAGGGATGCGA+CGG - Chr5:2657944-2657963 None:intergenic 50.0%
GATTGTGTTGGGATGCTGCA+AGG + Chr5:2659243-2659262 MsG0580024258.01.T01:intron 50.0%
GCAATCATGGAGGGAGGTTA+TGG + Chr5:2664032-2664051 MsG0580024258.01.T01:CDS 50.0%
GCACCATAGAAGGTGGAACA+TGG - Chr5:2660999-2661018 None:intergenic 50.0%
GGACTTCCATGCACCATAGA+AGG - Chr5:2661009-2661028 None:intergenic 50.0%
GGATTTGGATCACCTGGAGT+TGG + Chr5:2658131-2658150 MsG0580024258.01.T01:five_prime_UTR 50.0%
GGCATTTATGCTCGGACGTT+GGG + Chr5:2666150-2666169 MsG0580024258.01.T01:CDS 50.0%
GGCCACAATCAGAAAGGTCA+TGG - Chr5:2661728-2661747 None:intergenic 50.0%
GTCAGCAGGCATCACAATCA+TGG + Chr5:2665777-2665796 MsG0580024258.01.T01:CDS 50.0%
GTTCCACCTTCTATGGTGCA+TGG + Chr5:2661000-2661019 MsG0580024258.01.T01:intron 50.0%
TAGCTCCCGTATTAGGTGCA+AGG - Chr5:2665383-2665402 None:intergenic 50.0%
TATGGTGCATGGAAGTCCCT+TGG + Chr5:2661011-2661030 MsG0580024258.01.T01:intron 50.0%
TATGTTCTCCCCCATCGCAA+CGG - Chr5:2663230-2663249 None:intergenic 50.0%
TCACGCATTGAGCTCTTCAG+GGG - Chr5:2665500-2665519 None:intergenic 50.0%
TGAACAACTGTAGCCATGGC+CGG + Chr5:2661769-2661788 MsG0580024258.01.T01:intron 50.0%
! ATTCTGCTGGTGGTGTCAGA+GGG + Chr5:2659307-2659326 MsG0580024258.01.T01:intron 50.0%
! CGCGGTTGATTTCCGGATAT+AGG - Chr5:2657873-2657892 None:intergenic 50.0%
! TATTCTGCTGGTGGTGTCAG+AGG + Chr5:2659306-2659325 MsG0580024258.01.T01:intron 50.0%
!! AGGCCAGTTTTATCCGGCAA+TGG + Chr5:2663874-2663893 MsG0580024258.01.T01:CDS 50.0%
!! GCTCTGGAAATTACGGGATC+AGG + Chr5:2661116-2661135 MsG0580024258.01.T01:intron 50.0%
AACCATTCGCGCTCAGACAC+GGG - Chr5:2661374-2661393 None:intergenic 55.0%
AGATTGAGGGATGCGACGGA+AGG - Chr5:2657940-2657959 None:intergenic 55.0%
AGCTCTTCAGGGGTTGCTTC+TGG - Chr5:2665490-2665509 None:intergenic 55.0%
CAACCATTCGCGCTCAGACA+CGG - Chr5:2661375-2661394 None:intergenic 55.0%
CCATGCTAGCAAGAGAAGCC+CGG - Chr5:2661801-2661820 None:intergenic 55.0%
CGAGAATCTACGGGCACACA+AGG - Chr5:2663253-2663272 None:intergenic 55.0%
CGGCATTTATGCTCGGACGT+TGG + Chr5:2666149-2666168 MsG0580024258.01.T01:CDS 55.0%
CGGGCTTCTCTTGCTAGCAT+GGG + Chr5:2661799-2661818 MsG0580024258.01.T01:intron 55.0%
GAAGGTGGAACATGGTCGCT+TGG - Chr5:2660991-2661010 None:intergenic 55.0%
GACACGGGTCTCCTGAAAGA+TGG - Chr5:2661359-2661378 None:intergenic 55.0%
GAGAAAATGGTGGTCGTCGG+TGG - Chr5:2662839-2662858 None:intergenic 55.0%
GATTGAGGGATGCGACGGAA+GGG - Chr5:2657939-2657958 None:intergenic 55.0%
GCAAGTCCCTAACAAGGTCG+AGG - Chr5:2665024-2665043 None:intergenic 55.0%
GCTTGTGCGGACAACTTGTG+CGG + Chr5:2666197-2666216 MsG0580024258.01.T01:CDS 55.0%
GGCGGAAAACCTGGCAGATA+AGG - Chr5:2663524-2663543 None:intergenic 55.0%
GGGTAATCTTCGAGAGGCTG+AGG + Chr5:2663993-2664012 MsG0580024258.01.T01:CDS 55.0%
GTCAAACCGAGCTTGGCAGT+GGG + Chr5:2666013-2666032 MsG0580024258.01.T01:CDS 55.0%
GTCACCGGAGCTCCTATATC+CGG + Chr5:2657858-2657877 MsG0580024258.01.T01:five_prime_UTR 55.0%
GTCGCTCTAGCCATGATCGA+AGG - Chr5:2665691-2665710 None:intergenic 55.0%
TATCCGGAAATCAACCGCGC+CGG + Chr5:2657874-2657893 MsG0580024258.01.T01:five_prime_UTR 55.0%
TCAAACCGAGCTTGGCAGTG+GGG + Chr5:2666014-2666033 MsG0580024258.01.T01:CDS 55.0%
TTCGAGAGGCTGAGGTTGAG+AGG + Chr5:2664001-2664020 MsG0580024258.01.T01:CDS 55.0%
TTGCCCTACTTGCAGAGCCT+TGG + Chr5:2665718-2665737 MsG0580024258.01.T01:CDS 55.0%
! CTTTGGAGATGGAGAGGGTC+AGG - Chr5:2657814-2657833 None:intergenic 55.0%
! TCAGCCAGAAAGTGCAGCCA+AGG - Chr5:2659573-2659592 None:intergenic 55.0%
!! CGAGTCCTGGCTTTGCTAGA+AGG - Chr5:2657839-2657858 None:intergenic 55.0%
AACTGCTGCTGGAGGTCAGC+AGG + Chr5:2665763-2665782 MsG0580024258.01.T01:CDS 60.0%
AAGCTGCAGCAGCAGCTGCT+TGG - Chr5:2666077-2666096 None:intergenic 60.0%
AATGGTGGTCGTCGGTGGTC+AGG - Chr5:2662834-2662853 None:intergenic 60.0%
AGAATCATCTTCGCCGGCGC+CGG - Chr5:2657896-2657915 None:intergenic 60.0%
CCGGGCTTCTCTTGCTAGCA+TGG + Chr5:2661798-2661817 MsG0580024258.01.T01:intron 60.0%
CGACGGAAGGGAGACGAGAA+CGG - Chr5:2657927-2657946 None:intergenic 60.0%
GCAAAGCCAGGACTCGTCAC+CGG + Chr5:2657843-2657862 MsG0580024258.01.T01:five_prime_UTR 60.0%
GCTGAGATGACGAGACCCGA+TGG + Chr5:2659060-2659079 MsG0580024258.01.T01:CDS 60.0%
GGTCAAACCGAGCTTGGCAG+TGG + Chr5:2666012-2666031 MsG0580024258.01.T01:CDS 60.0%
!! GCAGCTGAGGAAGGCACTCA+TGG + Chr5:2660919-2660938 MsG0580024258.01.T01:CDS 60.0%
!! GGGACAGGCACTGGAAGTAC+AGG + Chr5:2665991-2666010 MsG0580024258.01.T01:intron 60.0%
AACCGAGCTTGGCAGTGGGG+CGG + Chr5:2666017-2666036 MsG0580024258.01.T01:CDS 65.0%
AAGAGAAGCCCGGCAGGCAC+CGG - Chr5:2661791-2661810 None:intergenic 65.0%
CGGGGAGAAAGCGGTCGAAG+TGG - Chr5:2657984-2658003 None:intergenic 65.0%
GACCCGTGTCTGAGCGCGAA+TGG + Chr5:2661369-2661388 MsG0580024258.01.T01:intron 65.0%
GCTAGCAAGAGAAGCCCGGC+AGG - Chr5:2661797-2661816 None:intergenic 65.0%
GTGGTCGTCGGTGGTCAGGA+AGG - Chr5:2662830-2662849 None:intergenic 65.0%
! GCTCGGACGTTGGGCCCTTT+TGG + Chr5:2666159-2666178 MsG0580024258.01.T01:CDS 65.0%
GGAGCTCCGGTGACGAGTCC+TGG - Chr5:2657852-2657871 None:intergenic 70.0%
TAGCCATGGCCGGTGCCTGC+CGG + Chr5:2661779-2661798 MsG0580024258.01.T01:intron 70.0%
TGCCGCCCCACTGCCAAGCT+CGG - Chr5:2666022-2666041 None:intergenic 70.0%
! GAAATCAACCGCGCCGGCGC+CGG + Chr5:2657880-2657899 MsG0580024258.01.T01:five_prime_UTR 70.0%
! GCGCCGGCGCGGTTGATTTC+CGG - Chr5:2657880-2657899 None:intergenic 70.0%
AGCCATGGCCGGTGCCTGCC+GGG + Chr5:2661780-2661799 MsG0580024258.01.T01:intron 75.0%
!!! AGCCCGGCAGGCACCGGCCA+TGG - Chr5:2661785-2661804 None:intergenic 80.0%
!!! CATCTTCGCCGGCGCCGGCG+CGG - Chr5:2657891-2657910 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
Chr5 gene 2657744 2666317 2657744 ID=MsG0580024258.01;Name=MsG0580024258.01
Chr5 mRNA 2657744 2666317 2657744 ID=MsG0580024258.01.T01;Parent=MsG0580024258.01;Name=MsG0580024258.01.T01;_AED=0.35;_eAED=0.39;_QI=337|0.5|0.63|1|0.8|0.72|11|0|538
Chr5 exon 2657744 2658002 2657744 ID=MsG0580024258.01.T01:exon:886;Parent=MsG0580024258.01.T01
Chr5 exon 2658089 2658203 2658089 ID=MsG0580024258.01.T01:exon:887;Parent=MsG0580024258.01.T01
Chr5 exon 2658817 2658932 2658817 ID=MsG0580024258.01.T01:exon:888;Parent=MsG0580024258.01.T01
Chr5 exon 2659036 2659155 2659036 ID=MsG0580024258.01.T01:exon:889;Parent=MsG0580024258.01.T01
Chr5 exon 2660199 2660338 2660199 ID=MsG0580024258.01.T01:exon:890;Parent=MsG0580024258.01.T01
Chr5 exon 2660883 2660942 2660883 ID=MsG0580024258.01.T01:exon:891;Parent=MsG0580024258.01.T01
Chr5 exon 2663793 2663925 2663793 ID=MsG0580024258.01.T01:exon:892;Parent=MsG0580024258.01.T01
Chr5 exon 2663985 2664328 2663985 ID=MsG0580024258.01.T01:exon:893;Parent=MsG0580024258.01.T01
Chr5 exon 2665366 2665515 2665366 ID=MsG0580024258.01.T01:exon:894;Parent=MsG0580024258.01.T01
Chr5 exon 2665604 2665810 2665604 ID=MsG0580024258.01.T01:exon:895;Parent=MsG0580024258.01.T01
Chr5 exon 2666008 2666317 2666008 ID=MsG0580024258.01.T01:exon:896;Parent=MsG0580024258.01.T01
Chr5 five_prime_UTR 2657744 2658002 2657744 ID=MsG0580024258.01.T01:five_prime_utr;Parent=MsG0580024258.01.T01
Chr5 five_prime_UTR 2658089 2658166 2658089 ID=MsG0580024258.01.T01:five_prime_utr;Parent=MsG0580024258.01.T01
Chr5 CDS 2658167 2658203 2658167 ID=MsG0580024258.01.T01:cds;Parent=MsG0580024258.01.T01
Chr5 CDS 2658817 2658932 2658817 ID=MsG0580024258.01.T01:cds;Parent=MsG0580024258.01.T01
Chr5 CDS 2659036 2659155 2659036 ID=MsG0580024258.01.T01:cds;Parent=MsG0580024258.01.T01
Chr5 CDS 2660199 2660338 2660199 ID=MsG0580024258.01.T01:cds;Parent=MsG0580024258.01.T01
Chr5 CDS 2660883 2660942 2660883 ID=MsG0580024258.01.T01:cds;Parent=MsG0580024258.01.T01
Chr5 CDS 2663793 2663925 2663793 ID=MsG0580024258.01.T01:cds;Parent=MsG0580024258.01.T01
Chr5 CDS 2663985 2664328 2663985 ID=MsG0580024258.01.T01:cds;Parent=MsG0580024258.01.T01
Chr5 CDS 2665366 2665515 2665366 ID=MsG0580024258.01.T01:cds;Parent=MsG0580024258.01.T01
Chr5 CDS 2665604 2665810 2665604 ID=MsG0580024258.01.T01:cds;Parent=MsG0580024258.01.T01
Chr5 CDS 2666008 2666317 2666008 ID=MsG0580024258.01.T01:cds;Parent=MsG0580024258.01.T01
Gene Sequence

>MsG0580024258.01.T01

ATGAATGAACTTTATGGTTTTGATTCAACTTCTCCTGGGATGCTACCACCTTTTACTATACAATCTGAAGAGAATAGAGCTATGGCGAGACATTGTTCTACTGGCATTGAACCTAGGATATCGGCTGAACGTATCATACTTCTTGATACACAGCCTGTATTTAGTGCTTCTGTTTTAGCTGAGATGACGAGACCCGATGGCTCTTCAACAATTTCTTTGCTGAATGGAGAATCCTTGTCAGCTGAATTAGCTCATGACCTTATGGGTATTCAGGTTGACTTGTTGAAGCATGACATTTCAGACCCATCTTTGCTGGCTTCCTCTATTTCACAGAACTCTAGCTCAGGGCATGATAGTGATAACAAAGTTCCTGAGTTCGAATACATGGCTACTCCTGTTTTTGTACATACCAAGCTACAAGATCAAGAGTTTACTCCTAAAAATTGTTTGCAGCTGAGGAAGGCACTCATGGAGAACATGATGAGGTTGAAGACATATGCTGGTCTTAGTTTGATGGCAACTTTGGCTATTGCATACCATGCATTTAACAGTAGAGGCCAGTTTTATCCGGCAATGGTGTATCTTTCAACTTCCAAGATCAGTTTGGTATTCTTGGGTAATCTTCGAGAGGCTGAGGTTGAGAGGCTTAATGAGCAATCATGGAGGGAGGTTATGGAGATCCTCTTTGCAATTACTATTTTTAGGCAGGATTTCTCTGTTACATTCCTTGCGATGGTCACTGCATTGTTGTTAATTAAGGCTTTACATTGGTTGGCTCAAAAGAGAGTCGAGTACATCGAGACCACTCCTACAGTGACCACATTATCCCATATTCGAATTGTATCTTTTATGGGTTTCCTTCTTCTTCTAGATAGCATTTTCTTATACAGCTCTTTGAAACATTTGATACAAACATGGCAGGCTTCCGTTTCACTGTTCTTTGCTTTCGAAAACTATGGAATTCCCTTGCACCTAATACGGGAGCTATACGAGACATTTAGGAACTTCAAAGCTCGCATTGCAGATTACATTAGATATCGTAAGATCACTTCAAATATGAATGATCGCTTTCCAGAAGCAACCCCTGAAGAGCTCAATGCTAGTGATGCAACTTGTATTATCTGTCGTGAAGAGATGACTGCAGCCAAAAAACTGATATGTGGACACCTTTTTCATGTTCATTGCCTTCGATCATGGCTAGAGCGACAACACACTTGCCCTACTTGCAGAGCCTTGGTTGTACCCCCAGAAAATGGAACAACTGCTGCTGGAGGTCAGCAGGCATCACAATCATGGTCATCAACAGGTACAGGTCAAACCGAGCTTGGCAGTGGGGCGGCAACTGATAGTTTCAGTCGGCATCAAGCTAGACTCCAAGCAGCTGCTGCTGCAGCTTCAATATATGAGAAGTCTTATGTTTATCCTCCCGCAACTTCTTTTGTACGGTACGGCATTTATGCTCGGACGTTGGGCCCTTTTGGATTTGCTTATTTTGAGCTTGTGCGGACAACTTGTGCGGAACAACTTGTGCAAATAAATAAGCTATTATGTATTATTCATAAGCTTGTCAAGTTAGTTAATGAAAAAACAGCTTATGAAGATACATTTTTTCGTTAG
Protein sequence

>MsG0580024258.01.T01

MNELYGFDSTSPGMLPPFTIQSEENRAMARHCSTGIEPRISAERIILLDTQPVFSASVLAEMTRPDGSSTISLLNGESLSAELAHDLMGIQVDLLKHDISDPSLLASSISQNSSSGHDSDNKVPEFEYMATPVFVHTKLQDQEFTPKNCLQLRKALMENMMRLKTYAGLSLMATLAIAYHAFNSRGQFYPAMVYLSTSKISLVFLGNLREAEVERLNEQSWREVMEILFAITIFRQDFSVTFLAMVTALLLIKALHWLAQKRVEYIETTPTVTTLSHIRIVSFMGFLLLLDSIFLYSSLKHLIQTWQASVSLFFAFENYGIPLHLIRELYETFRNFKARIADYIRYRKITSNMNDRFPEATPEELNASDATCIICREEMTAAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPENGTTAAGGQQASQSWSSTGTGQTELGSGAATDSFSRHQARLQAAAAAASIYEKSYVYPPATSFVRYGIYARTLGPFGFAYFELVRTTCAEQLVQINKLLCIIHKLVKLVNEKTAYEDTFFR*