AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580024503.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580024503.01.T01 MTR_5g012390 99.713 349 1 0 1 349 1 349 0.0 715
MsG0580024503.01.T01 MTR_4g101130 85.673 349 50 0 1 349 1 349 0.0 615
MsG0580024503.01.T01 MTR_2g087350 91.954 87 7 0 398 484 296 382 2.46e-43 158
MsG0580024503.01.T01 MTR_1g056880 67.470 83 27 0 402 484 331 413 7.06e-26 110
MsG0580024503.01.T01 MTR_7g106340 66.265 83 28 0 402 484 315 397 1.06e-25 109
MsG0580024503.01.T01 MTR_2g019860 89.091 55 6 0 349 403 94 148 8.10e-25 108
MsG0580024503.01.T01 MTR_1g056870 65.060 83 29 0 402 484 331 413 9.37e-24 103
MsG0580024503.01.T01 MTR_1g056840 60.241 83 26 1 402 484 312 387 1.54e-19 91.3
MsG0580024503.01.T01 MTR_4g119100 72.414 58 16 0 346 403 99 156 1.82e-19 92.0
MsG0580024503.01.T01 MTR_4g119100 72.414 58 16 0 346 403 99 156 1.87e-19 92.0
MsG0580024503.01.T01 MTR_4g119100 72.414 58 16 0 346 403 98 155 2.65e-19 91.7
MsG0580024503.01.T01 MTR_4g051515 42.169 83 48 0 402 484 309 391 1.32e-15 79.0
MsG0580024503.01.T01 MTR_4g092690 24.514 257 161 10 39 281 46 283 8.46e-12 67.0
MsG0580024503.01.T01 MTR_1g056910 38.554 83 51 0 402 484 304 386 5.65e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580024503.01.T01 AT4G17260 77.493 351 76 1 1 348 1 351 0.0 548
MsG0580024503.01.T01 AT2G35930 62.651 83 31 0 402 484 307 389 2.03e-24 105
MsG0580024503.01.T01 AT3G52450 60.241 83 33 0 402 484 331 413 3.60e-23 102
MsG0580024503.01.T01 AT5G18590 67.241 58 19 0 346 403 81 138 5.10e-17 84.7
MsG0580024503.01.T01 AT5G18590 67.241 58 19 0 346 403 81 138 5.10e-17 84.7
MsG0580024503.01.T01 AT3G11840 46.988 83 44 0 402 484 344 426 4.55e-16 80.9
MsG0580024503.01.T01 AT2G22780 24.809 262 162 11 39 285 44 285 2.85e-11 65.5

Find 132 sgRNAs with CRISPR-Local

Find 354 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTGGTTCGGGCACTAATT+TGG 0.197877 5:-5733440 MsG0580024503.01.T01:CDS
TATGAAGTGATCAGTTTAAA+AGG 0.208835 5:-5732953 MsG0580024503.01.T01:CDS
GCTGGGGCTCGCCAGATTAA+TGG 0.260199 5:-5733628 MsG0580024503.01.T01:CDS
GAATTATGAGTTCTATTTGT+AGG 0.264940 5:-5729171 MsG0580024503.01.T01:CDS
GACCTCTGCATCGTCACTGC+TGG 0.269339 5:-5733646 MsG0580024503.01.T01:CDS
GTTTAAAAGGGTACACTTCT+TGG 0.289469 5:-5732940 MsG0580024503.01.T01:CDS
ATCTCACCTCGTAGCTTATC+AGG 0.323215 5:+5733751 None:intergenic
ACCTCTGCATCGTCACTGCT+GGG 0.330491 5:-5733645 MsG0580024503.01.T01:CDS
CATCAAGATGATCAGCAATA+AGG 0.342388 5:+5733398 None:intergenic
CCCTTTGCAAGAACTGAAAC+AGG 0.356068 5:+5732854 None:intergenic
AAGAGGAGATGAAGAGGCTT+AGG 0.361933 5:-5732736 MsG0580024503.01.T01:CDS
ACTCAAACATGTAAATGATA+TGG 0.362904 5:-5729032 MsG0580024503.01.T01:CDS
ATCATTGGGACCAGATGGTT+TGG 0.365992 5:-5733941 MsG0580024503.01.T01:CDS
AAAATGCACAAAAGCATATC+AGG 0.366781 5:-5733967 MsG0580024503.01.T01:CDS
CTTGGTAGAGGAGGTGTATT+GGG 0.368641 5:-5732782 MsG0580024503.01.T01:CDS
CTCCAACCGAGTCATTGGTT+CGG 0.370504 5:-5733452 MsG0580024503.01.T01:CDS
AAACTATGACCCTTGCAAAC+TGG 0.372760 5:+5730455 None:intergenic
CCTTTGTAGCAAATTCAATC+TGG 0.377803 5:+5733600 None:intergenic
TTCCCCTCCAACCGAGTCAT+TGG 0.378810 5:-5733457 MsG0580024503.01.T01:CDS
ATCTGGACTCGCCATTAATC+TGG 0.381187 5:+5733617 None:intergenic
ATAGTGTTTGGTGGTGAATC+TGG 0.382024 5:-5730724 MsG0580024503.01.T01:CDS
AGGGTACTCCGTTGCAAACT+TGG 0.387073 5:-5732912 MsG0580024503.01.T01:CDS
AAACAGGGTGAATCTTCCTT+TGG 0.387150 5:+5732870 None:intergenic
TGAGATCTTGTTGTGGCGTT+TGG 0.389047 5:+5733864 None:intergenic
CTGAATAATCAGTGGAGGCC+TGG 0.394506 5:+5733683 None:intergenic
TCCAACCGAGTCATTGGTTC+GGG 0.395418 5:-5733451 MsG0580024503.01.T01:CDS
ACTTGAAGAAGGATTGAGTT+AGG 0.429690 5:+5733917 None:intergenic
TTTAAAAGGGTACACTTCTT+GGG 0.431299 5:-5732939 MsG0580024503.01.T01:CDS
TACATTGCTTGGAAACTCTC+TGG 0.433042 5:-5733481 MsG0580024503.01.T01:CDS
AGGAGTTTCAAAGTTGTGTT+TGG 0.433429 5:-5729104 MsG0580024503.01.T01:CDS
AAGCATATCAGGTTCATCAT+TGG 0.435410 5:-5733956 MsG0580024503.01.T01:CDS
ATCTGTAACGGCAGACTACT+TGG 0.440551 5:+5730479 None:intergenic
TCTCATGTTGCAAGTGATAG+AGG 0.444489 5:-5729199 MsG0580024503.01.T01:CDS
ATGTGCTCACTTACATTGCT+TGG 0.446335 5:-5733492 MsG0580024503.01.T01:CDS
AGCATATCAGGTTCATCATT+GGG 0.449605 5:-5733955 MsG0580024503.01.T01:CDS
GATATTGTAGGCATACATAG+TGG 0.450779 5:-5733119 MsG0580024503.01.T01:intron
CCTGTTTCAGTTCTTGCAAA+GGG 0.451433 5:-5732854 MsG0580024503.01.T01:CDS
GCTTGGTAGAGGAGGTGTAT+TGG 0.456494 5:-5732783 MsG0580024503.01.T01:CDS
ATGTAAGTGAGCACATCAAC+AGG 0.458914 5:+5733499 None:intergenic
GTTAAATGATGGAGCAGGAT+TGG 0.461494 5:-5729251 MsG0580024503.01.T01:CDS
CAAGGACAAGCTCGTCGACT+AGG 0.461803 5:+5733785 None:intergenic
TCTTGAGTTGCAGAATCAGT+TGG 0.461924 5:-5732696 MsG0580024503.01.T01:CDS
CCCTGTTTCAGTTCTTGCAA+AGG 0.471837 5:-5732855 MsG0580024503.01.T01:CDS
CTTGAGTTGCAGAATCAGTT+GGG 0.475495 5:-5732695 MsG0580024503.01.T01:intron
CGTCGACTAGGTCTTGTGTT+AGG 0.475720 5:+5733797 None:intergenic
TGAGTTAGGTCCAAACCATC+TGG 0.480685 5:+5733931 None:intergenic
GAGAATAAGATGATAGTGTT+TGG 0.481251 5:-5730736 MsG0580024503.01.T01:CDS
TTTGGTGGTGAATCTGGAAA+TGG 0.492857 5:-5730718 MsG0580024503.01.T01:CDS
GGGTACACTTCTTGGGCCAT+AGG 0.493662 5:-5732932 MsG0580024503.01.T01:CDS
TTGCCTGCACAGCTTGGTAG+AGG 0.498243 5:-5732794 MsG0580024503.01.T01:CDS
TGGCGTTTGGTTGGAGAAGG+AGG 0.498929 5:+5733877 None:intergenic
CCTCCTCTACCAAGCTGTGC+AGG 0.499160 5:+5732791 None:intergenic
GAGAAGGAGGTGAGGCATGT+TGG 0.500290 5:+5733890 None:intergenic
AGAGCAGAGTTGTTAAATGA+TGG 0.500837 5:-5729262 MsG0580024503.01.T01:CDS
CCTTCCCCGCACTAAGATCC+AGG 0.501282 5:-5733701 MsG0580024503.01.T01:CDS
GACTAGGTCTTGTGTTAGGA+TGG 0.502443 5:+5733801 None:intergenic
ATCTTGTTGTGGCGTTTGGT+TGG 0.508851 5:+5733868 None:intergenic
ATGTTGGATGGACTTGAAGA+AGG 0.509594 5:+5733906 None:intergenic
CATGAAATGTTGCGTGTTGG+AGG 0.510565 5:-5729124 MsG0580024503.01.T01:CDS
ACTTGGCTCGAACAATTATG+AGG 0.512310 5:-5732895 MsG0580024503.01.T01:CDS
AGAGGAGATGAAGAGGCTTA+GGG 0.514566 5:-5732735 MsG0580024503.01.T01:CDS
GATCTTAGTGCGGGGAAGGA+AGG 0.520118 5:+5733705 None:intergenic
GTGACAGTTCAGTGGCACTA+TGG 0.521160 5:-5733087 MsG0580024503.01.T01:CDS
ATACACAAGGAGGTTATAAA+CGG 0.522040 5:-5732980 MsG0580024503.01.T01:CDS
CCAGATTGAATTTGCTACAA+AGG 0.522205 5:-5733600 MsG0580024503.01.T01:CDS
GGAGGCCTGGATCTTAGTGC+GGG 0.522648 5:+5733696 None:intergenic
TAAGCTACGAGGTGAGATGC+TGG 0.524425 5:-5733746 MsG0580024503.01.T01:CDS
AGTGAGCACATCAACAGGAT+TGG 0.527203 5:+5733504 None:intergenic
AAGATCTCAGTGATCGGTGC+AGG 0.527426 5:-5733850 MsG0580024503.01.T01:CDS
CCTGGATCTTAGTGCGGGGA+AGG 0.529650 5:+5733701 None:intergenic
ATGAAGTGATCAGTTTAAAA+GGG 0.530193 5:-5732952 MsG0580024503.01.T01:CDS
GATGATCAGCAATAAGGAAA+CGG 0.530476 5:+5733404 None:intergenic
ATATTGTAGGCATACATAGT+GGG 0.532935 5:-5733118 MsG0580024503.01.T01:intron
TTGTGGCGTTTGGTTGGAGA+AGG 0.533243 5:+5733874 None:intergenic
CCTGCACAGCTTGGTAGAGG+AGG 0.533540 5:-5732791 MsG0580024503.01.T01:CDS
CGGTGCAGGCAACGTAGGAA+TGG 0.538070 5:-5733836 MsG0580024503.01.T01:CDS
AGGAGGTGAGGCATGTTGGA+TGG 0.541391 5:+5733894 None:intergenic
TGGTCAAGCATTAGTGTTGG+AGG 0.542005 5:-5733067 MsG0580024503.01.T01:CDS
ATTAGTTTGCCTGCACAGCT+TGG 0.543386 5:-5732800 MsG0580024503.01.T01:CDS
GTTACAGATTCCAGTTTGCA+AGG 0.549468 5:-5730465 MsG0580024503.01.T01:CDS
GTTTGCAACGGAGTACCCTA+TGG 0.552396 5:+5732916 None:intergenic
GGTACACTTCTTGGGCCATA+GGG 0.553284 5:-5732931 MsG0580024503.01.T01:CDS
GGTTCATCATTGGGACCAGA+TGG 0.553995 5:-5733946 MsG0580024503.01.T01:CDS
CACTGATTATTCAGTGACGA+TGG 0.555586 5:-5733674 MsG0580024503.01.T01:CDS
TGGATTGCTAGATGAGATGC+AGG 0.556131 5:-5730698 MsG0580024503.01.T01:intron
AACCAATGACTCGGTTGGAG+GGG 0.556552 5:+5733455 None:intergenic
CGAACCAATGACTCGGTTGG+AGG 0.557881 5:+5733453 None:intergenic
CACAACAAGATCTCAGTGAT+CGG 0.568213 5:-5733856 MsG0580024503.01.T01:CDS
ACTGATTATTCAGTGACGAT+GGG 0.569202 5:-5733673 MsG0580024503.01.T01:CDS
GAACCAATGACTCGGTTGGA+GGG 0.570859 5:+5733454 None:intergenic
GCCCGAACCAATGACTCGGT+TGG 0.576347 5:+5733450 None:intergenic
TAATATTCATATGACTGAAG+AGG 0.581935 5:-5732753 MsG0580024503.01.T01:CDS
CTATGGTCAAGCATTAGTGT+TGG 0.582886 5:-5733070 MsG0580024503.01.T01:CDS
TGTTAATGCTCAAGATGTGC+AGG 0.582927 5:-5733377 MsG0580024503.01.T01:intron
AGTGCGGGGAAGGAAGGCGG+CGG 0.585171 5:+5733711 None:intergenic
CCCCAGCAGTGACGATGCAG+AGG 0.586925 5:+5733644 None:intergenic
CAAGACAAAAGAGAGGGCTA+AGG 0.587076 5:-5729059 MsG0580024503.01.T01:CDS
CTTAGTGCGGGGAAGGAAGG+CGG 0.587177 5:+5733708 None:intergenic
TTACAGATTCCAGTTTGCAA+GGG 0.593058 5:-5730464 MsG0580024503.01.T01:intron
TGTTCGAGCCAAGTTTGCAA+CGG 0.597418 5:+5732904 None:intergenic
TTACATGAAATGTTGCGTGT+TGG 0.602505 5:-5729127 MsG0580024503.01.T01:CDS
GAGTTGTTAAATGATGGAGC+AGG 0.603305 5:-5729256 MsG0580024503.01.T01:CDS
TGACTGAAGAGGAGATGAAG+AGG 0.604780 5:-5732742 MsG0580024503.01.T01:CDS
TGGAGGCCTGGATCTTAGTG+CGG 0.604884 5:+5733695 None:intergenic
CATCTTATTCTCAATGACAC+AGG 0.607094 5:+5730747 None:intergenic
CCTCTGCATCGTCACTGCTG+GGG 0.608669 5:-5733644 MsG0580024503.01.T01:CDS
GGAACACGGTGACAGTTCAG+TGG 0.610262 5:-5733095 MsG0580024503.01.T01:CDS
TTGCAAACTGGAATCTGTAA+CGG 0.615964 5:+5730467 None:intergenic
GAACAATTATGAGGAACCAA+AGG 0.619920 5:-5732886 MsG0580024503.01.T01:CDS
TATCAGGAATAGCGTCGACA+AGG 0.623723 5:+5733767 None:intergenic
GTGATCGGTGCAGGCAACGT+AGG 0.624497 5:-5733841 MsG0580024503.01.T01:CDS
CGATCACTGAGATCTTGTTG+TGG 0.631704 5:+5733857 None:intergenic
TATTGTAGGCATACATAGTG+GGG 0.637162 5:-5733117 MsG0580024503.01.T01:intron
AATAAGATGATAGTGTTTGG+TGG 0.637222 5:-5730733 MsG0580024503.01.T01:CDS
GTAATTTCAAGACAAAAGAG+AGG 0.637702 5:-5729066 MsG0580024503.01.T01:CDS
ACAATTAGAAGAACACAATG+AGG 0.641975 5:+5733529 None:intergenic
TGAGGAGAGTAACGAACCAA+AGG 0.646562 5:+5733547 None:intergenic
TAATTTCAAGACAAAAGAGA+GGG 0.648697 5:-5729065 MsG0580024503.01.T01:CDS
CATCGTCACTGAATAATCAG+TGG 0.654394 5:+5733675 None:intergenic
GGAGAGTAACGAACCAAAGG+TGG 0.659475 5:+5733550 None:intergenic
AATAAGGAAACGGAAGCGAG+AGG 0.661745 5:+5733414 None:intergenic
CGTCACTGAATAATCAGTGG+AGG 0.665106 5:+5733678 None:intergenic
CTGATTATTCAGTGACGATG+GGG 0.665528 5:-5733672 MsG0580024503.01.T01:CDS
CCTTTGCAAGAACTGAAACA+GGG 0.666624 5:+5732855 None:intergenic
TAGTGCCCGAACCAATGACT+CGG 0.674597 5:+5733446 None:intergenic
TTTGGTTGGAGAAGGAGGTG+AGG 0.678881 5:+5733882 None:intergenic
ATTGTAGGCATACATAGTGG+GGG 0.687520 5:-5733116 MsG0580024503.01.T01:intron
GAGGCCTGGATCTTAGTGCG+GGG 0.703867 5:+5733697 None:intergenic
GCTAGAGAACATACACAAGG+AGG 0.704826 5:-5732990 MsG0580024503.01.T01:CDS
AATGCTAGAGAACATACACA+AGG 0.727619 5:-5732993 MsG0580024503.01.T01:CDS
GCTATTCCTGATAAGCTACG+AGG 0.790698 5:-5733757 MsG0580024503.01.T01:CDS
GTATAGCTTAGATGACACAG+CGG 0.844638 5:+5730508 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATTAATTATAATGCAAA+TGG - Chr5:5732851-5732870 MsG0580024503.01.T01:CDS 10.0%
!! TAATTAATTATAATGCAAAT+GGG - Chr5:5732852-5732871 MsG0580024503.01.T01:CDS 10.0%
!!! ATTAATATTGACTAATTATT+TGG - Chr5:5732384-5732403 MsG0580024503.01.T01:intron 10.0%
!!! ATTGTATATTATGTTATTTT+CGG + Chr5:5731431-5731450 None:intergenic 10.0%
!!! TTAATTAGTTGTTAATTTTT+AGG - Chr5:5731386-5731405 MsG0580024503.01.T01:intron 10.0%
!! AAAAAAAAAATCCTTTAATC+TGG + Chr5:5733031-5733050 None:intergenic 15.0%
!! AAAAAAAAATCCTTTAATCT+GGG + Chr5:5733030-5733049 None:intergenic 15.0%
!! AATAAGCTAAAAATAACTTA+TGG - Chr5:5731506-5731525 MsG0580024503.01.T01:intron 15.0%
!! TAAATACAATAACAACAAAA+TGG + Chr5:5730357-5730376 None:intergenic 15.0%
!!! AAAATACGTTATTTTTAAGA+AGG + Chr5:5732998-5733017 None:intergenic 15.0%
!!! TAAATTTTGACAAATTTTCA+TGG - Chr5:5732456-5732475 MsG0580024503.01.T01:intron 15.0%
!!! TAGTAAACTCAATATTTTAT+CGG - Chr5:5729838-5729857 MsG0580024503.01.T01:intron 15.0%
!!! TATTTTTTTTTCAAGCAATA+AGG + Chr5:5729649-5729668 None:intergenic 15.0%
!! AACAAAATGGTACATATATT+AGG + Chr5:5730344-5730363 None:intergenic 20.0%
!! AGTATGTTGAGAAATAAATA+TGG - Chr5:5730425-5730444 MsG0580024503.01.T01:intron 20.0%
!! CCAATAAAATAATAGTATGT+TGG + Chr5:5732429-5732448 None:intergenic 20.0%
!! TAAAAAAATTATACCACCTT+TGG - Chr5:5729425-5729444 MsG0580024503.01.T01:intron 20.0%
!!! AAAGAAAACATACAATTTTG+AGG + Chr5:5731128-5731147 None:intergenic 20.0%
!!! AAGAAAACATACAATTTTGA+GGG + Chr5:5731127-5731146 None:intergenic 20.0%
!!! AAGATATTTTAAGAAGCTTA+TGG - Chr5:5731747-5731766 MsG0580024503.01.T01:intron 20.0%
!!! AAGTTATGTTTGTTTTTTAG+TGG + Chr5:5730605-5730624 None:intergenic 20.0%
!!! AGATATTTTAAGAAGCTTAT+GGG - Chr5:5731748-5731767 MsG0580024503.01.T01:intron 20.0%
!!! AGTTATGTTTGTTTTTTAGT+GGG + Chr5:5730604-5730623 None:intergenic 20.0%
!!! ATAGTCAAGAATCTATTTTT+AGG + Chr5:5731851-5731870 None:intergenic 20.0%
!!! ATTAAGTTGTTTATCCAAAT+AGG - Chr5:5732125-5732144 MsG0580024503.01.T01:intron 20.0%
!!! CCAACATACTATTATTTTAT+TGG - Chr5:5732426-5732445 MsG0580024503.01.T01:intron 20.0%
!!! GGAAATTTGAAAACTTTTTA+GGG + Chr5:5731907-5731926 None:intergenic 20.0%
!!! TAGTCAAGAATCTATTTTTA+GGG + Chr5:5731850-5731869 None:intergenic 20.0%
!!! TATTTTCATTCTCTTTGTAT+TGG - Chr5:5731151-5731170 MsG0580024503.01.T01:intron 20.0%
!!! TTAAGTTGTTTATCCAAATA+GGG - Chr5:5732126-5732145 MsG0580024503.01.T01:intron 20.0%
!!! TTCGTTTATTCTTTTTTACT+GGG - Chr5:5733503-5733522 MsG0580024503.01.T01:CDS 20.0%
!!! TTTCGTTTATTCTTTTTTAC+TGG - Chr5:5733502-5733521 MsG0580024503.01.T01:CDS 20.0%
! AAAATAAGAAAATAGTGACC+AGG - Chr5:5733259-5733278 MsG0580024503.01.T01:intron 25.0%
! AAAATAATAGTATGTTGGTG+TGG + Chr5:5732424-5732443 None:intergenic 25.0%
! AAACTATCATTCATCAAGTT+AGG + Chr5:5733478-5733497 None:intergenic 25.0%
! AACTGACAATAAGTTTAACA+AGG - Chr5:5732768-5732787 MsG0580024503.01.T01:CDS 25.0%
! ACTCAAACATGTAAATGATA+TGG - Chr5:5733956-5733975 MsG0580024503.01.T01:CDS 25.0%
! ACTTAAGTCCATTCAAAAAT+TGG + Chr5:5733394-5733413 None:intergenic 25.0%
! ATGAAGTGATCAGTTTAAAA+GGG - Chr5:5730036-5730055 MsG0580024503.01.T01:intron 25.0%
! ATGTAAAAGCTAAAGTCATT+AGG - Chr5:5732060-5732079 MsG0580024503.01.T01:intron 25.0%
! ATTCAAATTCTCAAAACTTC+AGG + Chr5:5733187-5733206 None:intergenic 25.0%
! ATTCATCAAGTTAGGATTAT+TGG + Chr5:5733470-5733489 None:intergenic 25.0%
! GAATAGTAGATTAGAATGTA+GGG - Chr5:5731350-5731369 MsG0580024503.01.T01:intron 25.0%
! GAATTATGAGTTCTATTTGT+AGG - Chr5:5733817-5733836 MsG0580024503.01.T01:CDS 25.0%
! GATCAATGCAGATTATAATA+TGG + Chr5:5732965-5732984 None:intergenic 25.0%
! GATGATGAAATTTGTGAAAT+GGG + Chr5:5732026-5732045 None:intergenic 25.0%
! TAATATTCATATGACTGAAG+AGG - Chr5:5730235-5730254 MsG0580024503.01.T01:intron 25.0%
! TAATTTCAAGACAAAAGAGA+GGG - Chr5:5733923-5733942 MsG0580024503.01.T01:CDS 25.0%
! TATGAAGTGATCAGTTTAAA+AGG - Chr5:5730035-5730054 MsG0580024503.01.T01:intron 25.0%
! TCTATTTGACTAATAAGTGA+AGG - Chr5:5730448-5730467 MsG0580024503.01.T01:intron 25.0%
! TGAAAGAAAAATGAGGAATT+GGG + Chr5:5730991-5731010 None:intergenic 25.0%
! TGAATAGTAGATTAGAATGT+AGG - Chr5:5731349-5731368 MsG0580024503.01.T01:intron 25.0%
! TGGATAAACAACTTAATGAA+AGG + Chr5:5732122-5732141 None:intergenic 25.0%
! TTATCACTTCTTAGAATTGA+AGG - Chr5:5731639-5731658 MsG0580024503.01.T01:intron 25.0%
! TTGACTAATTATTTGGTTGT+TGG - Chr5:5732391-5732410 MsG0580024503.01.T01:intron 25.0%
! TTTCATCATCAAAATCAGAA+TGG - Chr5:5732036-5732055 MsG0580024503.01.T01:intron 25.0%
!! GGGAAATTTGAAAACTTTTT+AGG + Chr5:5731908-5731927 None:intergenic 25.0%
!! TGATGATGAAATTTGTGAAA+TGG + Chr5:5732027-5732046 None:intergenic 25.0%
!! TGTGTCAAAGAAAATTTTGA+GGG - Chr5:5733764-5733783 MsG0580024503.01.T01:CDS 25.0%
!! TTGTGTCAAAGAAAATTTTG+AGG - Chr5:5733763-5733782 MsG0580024503.01.T01:CDS 25.0%
!!! AGATGAAAATTTTAAGTTCG+CGG + Chr5:5730912-5730931 None:intergenic 25.0%
!!! ATACAATTTTGAGGGATTTA+AGG + Chr5:5731119-5731138 None:intergenic 25.0%
!!! CACATGTCATTTTTTTATGT+GGG + Chr5:5730570-5730589 None:intergenic 25.0%
!!! CATACTATTATTTTATTGGC+AGG - Chr5:5732430-5732449 MsG0580024503.01.T01:intron 25.0%
!!! TATGTTATTTTCGGATAACT+TGG + Chr5:5731422-5731441 None:intergenic 25.0%
!!! TATTCTTTTTTACTGGGAAT+CGG - Chr5:5733509-5733528 MsG0580024503.01.T01:CDS 25.0%
AAACTGTCAGCAATAAAAAG+AGG + Chr5:5731948-5731967 None:intergenic 30.0%
AACTGTCAGCAATAAAAAGA+GGG + Chr5:5731947-5731966 None:intergenic 30.0%
AAGCTAAAGTCATTAGGTTA+TGG - Chr5:5732066-5732085 MsG0580024503.01.T01:intron 30.0%
ACAATTAGAAGAACACAATG+AGG + Chr5:5729462-5729481 None:intergenic 30.0%
ACCATTGAAGATTGAATTAG+AGG - Chr5:5731711-5731730 MsG0580024503.01.T01:intron 30.0%
ACTAATTATTTGGTTGTTGG+TGG - Chr5:5732394-5732413 MsG0580024503.01.T01:intron 30.0%
AGTTGTGAATGAAATTCGAT+TGG + Chr5:5732752-5732771 None:intergenic 30.0%
ATACACAAGGAGGTTATAAA+CGG - Chr5:5730008-5730027 MsG0580024503.01.T01:intron 30.0%
ATATTGTAGGCATACATAGT+GGG - Chr5:5729870-5729889 MsG0580024503.01.T01:intron 30.0%
ATGTCATTATTAAGGTCACT+TGG + Chr5:5732621-5732640 None:intergenic 30.0%
CCACATAAAAAAATGACATG+TGG - Chr5:5730568-5730587 MsG0580024503.01.T01:intron 30.0%
GTAATTTCAAGACAAAAGAG+AGG - Chr5:5733922-5733941 MsG0580024503.01.T01:CDS 30.0%
GTGAAAGAAAAATGAGGAAT+TGG + Chr5:5730992-5731011 None:intergenic 30.0%
GTTTGTGAATTGATGTTGAT+AGG - Chr5:5733672-5733691 MsG0580024503.01.T01:CDS 30.0%
TAATGCAGATTGAATGGAAT+TGG + Chr5:5731882-5731901 None:intergenic 30.0%
TCAGGACTCAAAAAATTTCT+TGG + Chr5:5730510-5730529 None:intergenic 30.0%
TCCTCTAATTCAATCTTCAA+TGG + Chr5:5731715-5731734 None:intergenic 30.0%
TCGGTTCAATTTGATATTGT+AGG - Chr5:5729857-5729876 MsG0580024503.01.T01:intron 30.0%
! AATAAGATGATAGTGTTTGG+TGG - Chr5:5732255-5732274 MsG0580024503.01.T01:intron 30.0%
! AGAGCATCATGTCATTATTA+AGG + Chr5:5732629-5732648 None:intergenic 30.0%
! CAAACTTCTTTTCGATGTTT+CGG - Chr5:5733641-5733660 MsG0580024503.01.T01:CDS 30.0%
! CTTTTTATTGCTGACAGTTT+TGG - Chr5:5731948-5731967 MsG0580024503.01.T01:intron 30.0%
! GAGAATAAGATGATAGTGTT+TGG - Chr5:5732252-5732271 MsG0580024503.01.T01:intron 30.0%
! TACATTTTCCTAGGAAAACT+AGG - Chr5:5733288-5733307 MsG0580024503.01.T01:intron 30.0%
! TGAATTGATGTTGATAGGTT+TGG - Chr5:5733677-5733696 MsG0580024503.01.T01:CDS 30.0%
! TTTAAAAGGGTACACTTCTT+GGG - Chr5:5730049-5730068 MsG0580024503.01.T01:intron 30.0%
! TTTTCGTAATTAATCCTGGA+AGG - Chr5:5731475-5731494 MsG0580024503.01.T01:intron 30.0%
!! AGTTTCCAATCGTTTTGTTA+CGG + Chr5:5731076-5731095 None:intergenic 30.0%
!! CTATGTGTATTGACTTGTTT+GGG + Chr5:5731599-5731618 None:intergenic 30.0%
!! GTTGTTTTCGTAATTAATCC+TGG - Chr5:5731471-5731490 MsG0580024503.01.T01:intron 30.0%
!! TAGTGAGTTTGCTAAAATCA+CGG + Chr5:5729743-5729762 None:intergenic 30.0%
!! TATTGTTAAGTACTGACTAC+TGG - Chr5:5732191-5732210 MsG0580024503.01.T01:intron 30.0%
!! TCTATGTGTATTGACTTGTT+TGG + Chr5:5731600-5731619 None:intergenic 30.0%
!!! AACATTTCTGGTTTTGGAAT+TGG - Chr5:5732323-5732342 MsG0580024503.01.T01:intron 30.0%
!!! CAAGCACAAGATTCTTTTTT+TGG - Chr5:5731822-5731841 MsG0580024503.01.T01:intron 30.0%
!!! CCACATGTCATTTTTTTATG+TGG + Chr5:5730571-5730590 None:intergenic 30.0%
!!! GAAATTTTTTGAGTCCTGAT+AGG - Chr5:5730511-5730530 MsG0580024503.01.T01:CDS 30.0%
!!! TCATTTTTTTATGTGGGTGT+AGG + Chr5:5730564-5730583 None:intergenic 30.0%
AAAAATGACATGTGGCAATG+TGG - Chr5:5730576-5730595 MsG0580024503.01.T01:intron 35.0%
AAAATGACATGTGGCAATGT+GGG - Chr5:5730577-5730596 MsG0580024503.01.T01:intron 35.0%
AAGCATATCAGGTTCATCAT+TGG - Chr5:5729032-5729051 MsG0580024503.01.T01:CDS 35.0%
AATCCACCCTTAGTAAATTG+AGG - Chr5:5732696-5732715 MsG0580024503.01.T01:CDS 35.0%
AATGCTAGAGAACATACACA+AGG - Chr5:5729995-5730014 MsG0580024503.01.T01:intron 35.0%
AATTATAATGCAAATGGGCG+TGG - Chr5:5732857-5732876 MsG0580024503.01.T01:CDS 35.0%
ACAGGTTATGTGCAATATGA+TGG - Chr5:5731783-5731802 MsG0580024503.01.T01:intron 35.0%
ACTGATTATTCAGTGACGAT+GGG - Chr5:5729315-5729334 MsG0580024503.01.T01:intron 35.0%
ACTTGAAGAAGGATTGAGTT+AGG + Chr5:5729074-5729093 None:intergenic 35.0%
ACTTGATTCATGTAGATGGT+TGG - Chr5:5733104-5733123 MsG0580024503.01.T01:CDS 35.0%
AGAGCAGAGTTGTTAAATGA+TGG - Chr5:5733726-5733745 MsG0580024503.01.T01:CDS 35.0%
AGCATATCAGGTTCATCATT+GGG - Chr5:5729033-5729052 MsG0580024503.01.T01:CDS 35.0%
AGGAGTTTCAAAGTTGTGTT+TGG - Chr5:5733884-5733903 MsG0580024503.01.T01:CDS 35.0%
AGGGAATAATGCAGATTGAA+TGG + Chr5:5731888-5731907 None:intergenic 35.0%
AGTCCATTCAAAAATTGGTC+AGG + Chr5:5733389-5733408 None:intergenic 35.0%
ATAACTGATAAGCTGATCAG+GGG + Chr5:5731623-5731642 None:intergenic 35.0%
ATAGGTTTGGATCAACTTTG+TGG - Chr5:5733690-5733709 MsG0580024503.01.T01:CDS 35.0%
ATGGATGAAGTTACATACCA+TGG + Chr5:5732946-5732965 None:intergenic 35.0%
CATCAAGATGATCAGCAATA+AGG + Chr5:5729593-5729612 None:intergenic 35.0%
CATCACTTGATTCATGTAGA+TGG - Chr5:5733100-5733119 MsG0580024503.01.T01:CDS 35.0%
CATCTTATTCTCAATGACAC+AGG + Chr5:5732244-5732263 None:intergenic 35.0%
CCTTTGTAGCAAATTCAATC+TGG + Chr5:5729391-5729410 None:intergenic 35.0%
CTTGCTTTCATTCTTGGAAT+AGG - Chr5:5732894-5732913 MsG0580024503.01.T01:CDS 35.0%
GAACAATTATGAGGAACCAA+AGG - Chr5:5730102-5730121 MsG0580024503.01.T01:intron 35.0%
GATAACTGATAAGCTGATCA+GGG + Chr5:5731624-5731643 None:intergenic 35.0%
GATATTGTAGGCATACATAG+TGG - Chr5:5729869-5729888 MsG0580024503.01.T01:intron 35.0%
GATGATCAGCAATAAGGAAA+CGG + Chr5:5729587-5729606 None:intergenic 35.0%
GGACTAACATAAGGATACAT+TGG + Chr5:5733617-5733636 None:intergenic 35.0%
GTCCATTCAAAAATTGGTCA+GGG + Chr5:5733388-5733407 None:intergenic 35.0%
GTTTGCTTAGGACTAACATA+AGG + Chr5:5733626-5733645 None:intergenic 35.0%
TAGCAGCCTCAATTTACTAA+GGG + Chr5:5732705-5732724 None:intergenic 35.0%
TAGGAAAATGTACAAAGACC+TGG + Chr5:5733280-5733299 None:intergenic 35.0%
TATTGTAGGCATACATAGTG+GGG - Chr5:5729871-5729890 MsG0580024503.01.T01:intron 35.0%
TCCATTCAAAAATTGGTCAG+GGG + Chr5:5733387-5733406 None:intergenic 35.0%
TCCTAGGAAAACTAGGTAAA+AGG - Chr5:5733295-5733314 MsG0580024503.01.T01:intron 35.0%
TCGAGAGTGAAAGAAAAATG+AGG + Chr5:5730998-5731017 None:intergenic 35.0%
TCTTGAATGACATGCAGAAT+TGG - Chr5:5733325-5733344 MsG0580024503.01.T01:intron 35.0%
TGATAACTGATAAGCTGATC+AGG + Chr5:5731625-5731644 None:intergenic 35.0%
TTACAGATTCCAGTTTGCAA+GGG - Chr5:5732524-5732543 MsG0580024503.01.T01:intron 35.0%
TTACATGAAATGTTGCGTGT+TGG - Chr5:5733861-5733880 MsG0580024503.01.T01:CDS 35.0%
TTCGAAAAGCAATTAGTGAG+CGG + Chr5:5732804-5732823 None:intergenic 35.0%
TTGCAAACTGGAATCTGTAA+CGG + Chr5:5732524-5732543 None:intergenic 35.0%
TTTCGATGTTTCGGAAAGAA+GGG - Chr5:5733650-5733669 MsG0580024503.01.T01:CDS 35.0%
! ACTACTGGTCTGTTATTCAT+TGG - Chr5:5732206-5732225 MsG0580024503.01.T01:intron 35.0%
! AGAGGGATGAGAAAATGTTT+TGG + Chr5:5731930-5731949 None:intergenic 35.0%
! AGGGATGAGAAAATGTTTTG+GGG + Chr5:5731928-5731947 None:intergenic 35.0%
! AGGTCTTTGTACATTTTCCT+AGG - Chr5:5733279-5733298 MsG0580024503.01.T01:intron 35.0%
! CATCGAAAAGAAGTTTGCTT+AGG + Chr5:5733638-5733657 None:intergenic 35.0%
! CTTCAGGTGATTGTTGATTA+TGG - Chr5:5731312-5731331 MsG0580024503.01.T01:intron 35.0%
! CTTGCAAAGTTTTTCTGCAA+TGG - Chr5:5731986-5732005 MsG0580024503.01.T01:intron 35.0%
! CTTGGAATAGGATTGCATTT+TGG - Chr5:5732906-5732925 MsG0580024503.01.T01:CDS 35.0%
! GAGGGATGAGAAAATGTTTT+GGG + Chr5:5731929-5731948 None:intergenic 35.0%
! GATTTAAGGCGGTCTAAAAT+GGG + Chr5:5731105-5731124 None:intergenic 35.0%
! GTTCTTGCAAAGGGATTTTA+TGG - Chr5:5730143-5730162 MsG0580024503.01.T01:intron 35.0%
! GTTTAAAAGGGTACACTTCT+TGG - Chr5:5730048-5730067 MsG0580024503.01.T01:intron 35.0%
! TTTTCGATGTTTCGGAAAGA+AGG - Chr5:5733649-5733668 MsG0580024503.01.T01:CDS 35.0%
!! AAGGGATTTTATGGCATTGA+TGG - Chr5:5730152-5730171 MsG0580024503.01.T01:intron 35.0%
!! ACCTTTTACCTAGTTTTCCT+AGG + Chr5:5733299-5733318 None:intergenic 35.0%
!! CAATTTTGAGGGATTTAAGG+CGG + Chr5:5731116-5731135 None:intergenic 35.0%
!! CCAGATTGAATTTGCTACAA+AGG - Chr5:5729388-5729407 MsG0580024503.01.T01:intron 35.0%
!! CTTAAGTTGAAGTTCATTGC+AGG - Chr5:5733407-5733426 MsG0580024503.01.T01:CDS 35.0%
!! CTTATTTTCATAAGCCTTCC+AGG + Chr5:5731492-5731511 None:intergenic 35.0%
!! GAGAAAGGAGAAATGGATTA+AGG + Chr5:5730800-5730819 None:intergenic 35.0%
!!! GTTTGACCGATATTTTAGTG+AGG - Chr5:5731270-5731289 MsG0580024503.01.T01:intron 35.0%
AAACAGGGTGAATCTTCCTT+TGG + Chr5:5730121-5730140 None:intergenic 40.0%
AAACTATGACCCTTGCAAAC+TGG + Chr5:5732536-5732555 None:intergenic 40.0%
AAAGCCCTTTCTACAATGAG+AGG + Chr5:5730945-5730964 None:intergenic 40.0%
AACTTTGTGGTTGTGCAGAA+GGG - Chr5:5733703-5733722 MsG0580024503.01.T01:CDS 40.0%
AGGCCTCCTCACTAAAATAT+CGG + Chr5:5731279-5731298 None:intergenic 40.0%
AGTTTGCAAGGGTCATAGTT+TGG - Chr5:5732535-5732554 MsG0580024503.01.T01:intron 40.0%
ATGTAAGTGAGCACATCAAC+AGG + Chr5:5729492-5729511 None:intergenic 40.0%
ATGTGCTCACTTACATTGCT+TGG - Chr5:5729496-5729515 MsG0580024503.01.T01:intron 40.0%
ATTGTAGGCATACATAGTGG+GGG - Chr5:5729872-5729891 MsG0580024503.01.T01:intron 40.0%
CACAACAAGATCTCAGTGAT+CGG - Chr5:5729132-5729151 MsG0580024503.01.T01:CDS 40.0%
CATATGACGAAGACCCTATT+TGG + Chr5:5732142-5732161 None:intergenic 40.0%
CATCGTCACTGAATAATCAG+TGG + Chr5:5729316-5729335 None:intergenic 40.0%
CCTGTTTCAGTTCTTGCAAA+GGG - Chr5:5730134-5730153 MsG0580024503.01.T01:intron 40.0%
CCTTTGCAAGAACTGAAACA+GGG + Chr5:5730136-5730155 None:intergenic 40.0%
CTATGGTCAAGCATTAGTGT+TGG - Chr5:5729918-5729937 MsG0580024503.01.T01:intron 40.0%
CTCAAATGTTGAGAGAGAAG+AGG + Chr5:5730667-5730686 None:intergenic 40.0%
CTGATTATTCAGTGACGATG+GGG - Chr5:5729316-5729335 MsG0580024503.01.T01:intron 40.0%
GAAGTTACATACCATGGAGA+AGG + Chr5:5732940-5732959 None:intergenic 40.0%
GCAAAGAATTGGGTGAGTTA+TGG + Chr5:5731023-5731042 None:intergenic 40.0%
GGAGAAATTTACCTGAACGT+TGG + Chr5:5730970-5730989 None:intergenic 40.0%
GTAGCAGCCTCAATTTACTA+AGG + Chr5:5732706-5732725 None:intergenic 40.0%
GTATAGCTTAGATGACACAG+CGG + Chr5:5732483-5732502 None:intergenic 40.0%
GTCTACAGACGCAAAGAATT+GGG + Chr5:5731033-5731052 None:intergenic 40.0%
GTCTCCTCTCATTGTAGAAA+GGG - Chr5:5730938-5730957 MsG0580024503.01.T01:intron 40.0%
GTTACAGATTCCAGTTTGCA+AGG - Chr5:5732523-5732542 MsG0580024503.01.T01:intron 40.0%
TACATTGCTTGGAAACTCTC+TGG - Chr5:5729507-5729526 MsG0580024503.01.T01:intron 40.0%
TATGGGAGTAAGCTGAAAAC+AGG - Chr5:5731765-5731784 MsG0580024503.01.T01:intron 40.0%
TCTCATGTTGCAAGTGATAG+AGG - Chr5:5733789-5733808 MsG0580024503.01.T01:CDS 40.0%
TGATGCTCTCATCATAGACA+TGG - Chr5:5732640-5732659 MsG0580024503.01.T01:intron 40.0%
TGGATATTCATCCTTCTCCA+TGG - Chr5:5732926-5732945 MsG0580024503.01.T01:CDS 40.0%
TGTCTCCTCTCATTGTAGAA+AGG - Chr5:5730937-5730956 MsG0580024503.01.T01:intron 40.0%
TGTTAATGCTCAAGATGTGC+AGG - Chr5:5729611-5729630 MsG0580024503.01.T01:intron 40.0%
TTAAGGACTGTGAACGATGA+TGG + Chr5:5730783-5730802 None:intergenic 40.0%
TTCTCCAAAAAGCTTAGCAC+TGG + Chr5:5729951-5729970 None:intergenic 40.0%
TTGGCACTTGCTTTCATTCT+TGG - Chr5:5732888-5732907 MsG0580024503.01.T01:CDS 40.0%
! ACCCCTGACCAATTTTTGAA+TGG - Chr5:5733383-5733402 MsG0580024503.01.T01:CDS 40.0%
! ACTTGGCTCGAACAATTATG+AGG - Chr5:5730093-5730112 MsG0580024503.01.T01:intron 40.0%
! ATGTTGGATGGACTTGAAGA+AGG + Chr5:5729085-5729104 None:intergenic 40.0%
! CACTGATTATTCAGTGACGA+TGG - Chr5:5729314-5729333 MsG0580024503.01.T01:intron 40.0%
! CTTGAGTTGCAGAATCAGTT+GGG - Chr5:5730293-5730312 MsG0580024503.01.T01:intron 40.0%
! GAGTTGTTAAATGATGGAGC+AGG - Chr5:5733732-5733751 MsG0580024503.01.T01:CDS 40.0%
! GGATTTAAGGCGGTCTAAAA+TGG + Chr5:5731106-5731125 None:intergenic 40.0%
! GTTAAATGATGGAGCAGGAT+TGG - Chr5:5733737-5733756 MsG0580024503.01.T01:CDS 40.0%
! TCTTGAGTTGCAGAATCAGT+TGG - Chr5:5730292-5730311 MsG0580024503.01.T01:intron 40.0%
! TGTTCCAGTGCTAAGCTTTT+TGG - Chr5:5729944-5729963 MsG0580024503.01.T01:intron 40.0%
! TTGCTATTGCAGTGCATGTT+TGG + Chr5:5729771-5729790 None:intergenic 40.0%
! TTTTTATGTGGGTGTAGGAG+TGG + Chr5:5730559-5730578 None:intergenic 40.0%
!! AATGGTGGATCGAATGTAGT+GGG + Chr5:5730825-5730844 None:intergenic 40.0%
!! ATAGTGTTTGGTGGTGAATC+TGG - Chr5:5732264-5732283 MsG0580024503.01.T01:intron 40.0%
!! TTCCAATCGTTTTGTTACGG+TGG + Chr5:5731073-5731092 None:intergenic 40.0%
!! TTTGGTGGTGAATCTGGAAA+TGG - Chr5:5732270-5732289 MsG0580024503.01.T01:intron 40.0%
!!! GGATTTTATGGCATTGATGG+TGG - Chr5:5730155-5730174 MsG0580024503.01.T01:intron 40.0%
!!! TGACCGATATTTTAGTGAGG+AGG - Chr5:5731273-5731292 MsG0580024503.01.T01:intron 40.0%
!!! TGAGGGAACATTTCTGGTTT+TGG - Chr5:5732317-5732336 MsG0580024503.01.T01:intron 40.0%
AACATGCGCACAAGTGCAAT+TGG + Chr5:5729685-5729704 None:intergenic 45.0%
AAGAGGAGATGAAGAGGCTT+AGG - Chr5:5730252-5730271 MsG0580024503.01.T01:intron 45.0%
AATAAGGAAACGGAAGCGAG+AGG + Chr5:5729577-5729596 None:intergenic 45.0%
ACATGCGCACAAGTGCAATT+GGG + Chr5:5729684-5729703 None:intergenic 45.0%
AGAGAGGAGAAATGTAGTGG+TGG + Chr5:5730878-5730897 None:intergenic 45.0%
AGAGATGGAAGAGAGAGAGT+TGG + Chr5:5730636-5730655 None:intergenic 45.0%
AGAGGAGATGAAGAGGCTTA+GGG - Chr5:5730253-5730272 MsG0580024503.01.T01:intron 45.0%
AGTGAGCACATCAACAGGAT+TGG + Chr5:5729487-5729506 None:intergenic 45.0%
ATCATTGGGACCAGATGGTT+TGG - Chr5:5729047-5729066 MsG0580024503.01.T01:CDS 45.0%
ATCTCACCTCGTAGCTTATC+AGG + Chr5:5729240-5729259 None:intergenic 45.0%
ATCTGGACTCGCCATTAATC+TGG + Chr5:5729374-5729393 None:intergenic 45.0%
ATCTGTAACGGCAGACTACT+TGG + Chr5:5732512-5732531 None:intergenic 45.0%
ATTGCACTTGTGCGCATGTT+TGG - Chr5:5729685-5729704 MsG0580024503.01.T01:intron 45.0%
CAACTTTGTGGTTGTGCAGA+AGG - Chr5:5733702-5733721 MsG0580024503.01.T01:CDS 45.0%
CAAGACAAAAGAGAGGGCTA+AGG - Chr5:5733929-5733948 MsG0580024503.01.T01:CDS 45.0%
CACCACCGTAACAAAACGAT+TGG - Chr5:5731068-5731087 MsG0580024503.01.T01:intron 45.0%
CAGCCTCAATTTACTAAGGG+TGG + Chr5:5732702-5732721 None:intergenic 45.0%
CATGAAATGTTGCGTGTTGG+AGG - Chr5:5733864-5733883 MsG0580024503.01.T01:CDS 45.0%
CCCTGTTTCAGTTCTTGCAA+AGG - Chr5:5730133-5730152 MsG0580024503.01.T01:intron 45.0%
CCCTTTGCAAGAACTGAAAC+AGG + Chr5:5730137-5730156 None:intergenic 45.0%
CCTATGGTGGTATACCTATC+AGG + Chr5:5730528-5730547 None:intergenic 45.0%
CCTGATAGGTATACCACCAT+AGG - Chr5:5730525-5730544 MsG0580024503.01.T01:CDS 45.0%
CGATCACTGAGATCTTGTTG+TGG + Chr5:5729134-5729153 None:intergenic 45.0%
CGTCACTGAATAATCAGTGG+AGG + Chr5:5729313-5729332 None:intergenic 45.0%
CGTCTACAGACGCAAAGAAT+TGG + Chr5:5731034-5731053 None:intergenic 45.0%
GAAGAGGAAACACTCAGAGA+TGG + Chr5:5730651-5730670 None:intergenic 45.0%
GATAGGTATACCACCATAGG+TGG - Chr5:5730528-5730547 MsG0580024503.01.T01:CDS 45.0%
GCTAGAGAACATACACAAGG+AGG - Chr5:5729998-5730017 MsG0580024503.01.T01:intron 45.0%
GCTATTCCTGATAAGCTACG+AGG - Chr5:5729231-5729250 MsG0580024503.01.T01:CDS 45.0%
GGACTGTCACAGACTTTCAT+AGG - Chr5:5732087-5732106 MsG0580024503.01.T01:intron 45.0%
TGACTGAAGAGGAGATGAAG+AGG - Chr5:5730246-5730265 MsG0580024503.01.T01:intron 45.0%
TGAGGAGAGTAACGAACCAA+AGG + Chr5:5729444-5729463 None:intergenic 45.0%
TGAGTTAGGTCCAAACCATC+TGG + Chr5:5729060-5729079 None:intergenic 45.0%
TGGATTGCTAGATGAGATGC+AGG - Chr5:5732290-5732309 MsG0580024503.01.T01:intron 45.0%
TGTTCGAGCCAAGTTTGCAA+CGG + Chr5:5730087-5730106 None:intergenic 45.0%
TTCTTTGCGTCTGTAGACGA+CGG - Chr5:5731035-5731054 MsG0580024503.01.T01:intron 45.0%
! ATCTTGTTGTGGCGTTTGGT+TGG + Chr5:5729123-5729142 None:intergenic 45.0%
! CTTGGTAGAGGAGGTGTATT+GGG - Chr5:5730206-5730225 MsG0580024503.01.T01:intron 45.0%
! GACTAGGTCTTGTGTTAGGA+TGG + Chr5:5729190-5729209 None:intergenic 45.0%
! TGAGATCTTGTTGTGGCGTT+TGG + Chr5:5729127-5729146 None:intergenic 45.0%
! TGGTCAAGCATTAGTGTTGG+AGG - Chr5:5729921-5729940 MsG0580024503.01.T01:intron 45.0%
!! ATTAGTTTGCCTGCACAGCT+TGG - Chr5:5730188-5730207 MsG0580024503.01.T01:intron 45.0%
!! CAATGGTGGATCGAATGTAG+TGG + Chr5:5730826-5730845 None:intergenic 45.0%
!! CATTGGTTCGGGCACTAATT+TGG - Chr5:5729548-5729567 MsG0580024503.01.T01:intron 45.0%
!! GAAATGTAGTGGTGGATCGA+CGG + Chr5:5730870-5730889 None:intergenic 45.0%
!! GGTATTGACTAATCCTCCGA+CGG - Chr5:5731241-5731260 MsG0580024503.01.T01:intron 45.0%
!! GTCGGAGGATTAGTCAATAC+CGG + Chr5:5731242-5731261 None:intergenic 45.0%
!! TATCAGGAATAGCGTCGACA+AGG + Chr5:5729224-5729243 None:intergenic 45.0%
!!! ATTTTAAGTTCGCGGTGCTG+AGG + Chr5:5730904-5730923 None:intergenic 45.0%
AAGATCTCAGTGATCGGTGC+AGG - Chr5:5729138-5729157 MsG0580024503.01.T01:CDS 50.0%
AAGGGCTTTCTCCAACGTTC+AGG - Chr5:5730956-5730975 MsG0580024503.01.T01:intron 50.0%
AATGGGCGTGGTTCTTGGAT+TGG - Chr5:5732869-5732888 MsG0580024503.01.T01:CDS 50.0%
AGAGAACGACGAAAGAGGAC+CGG + Chr5:5730734-5730753 None:intergenic 50.0%
AGATGAGATGCAGGTGAGTG+AGG - Chr5:5732299-5732318 MsG0580024503.01.T01:intron 50.0%
AGGAGTGGTATTGCCACCTA+TGG + Chr5:5730544-5730563 None:intergenic 50.0%
AGTGGTATTGCCACCTATGG+TGG + Chr5:5730541-5730560 None:intergenic 50.0%
ATGCAAATGGGCGTGGTTCT+TGG - Chr5:5732864-5732883 MsG0580024503.01.T01:CDS 50.0%
ATTGACTAATCCTCCGACGG+AGG - Chr5:5731244-5731263 MsG0580024503.01.T01:intron 50.0%
CACAGAGAGAACGACGAAAG+AGG + Chr5:5730739-5730758 None:intergenic 50.0%
CGGAGAGAGGAGAAATGTAG+TGG + Chr5:5730881-5730900 None:intergenic 50.0%
CTGAATAATCAGTGGAGGCC+TGG + Chr5:5729308-5729327 None:intergenic 50.0%
GATGAGATGCAGGTGAGTGA+GGG - Chr5:5732300-5732319 MsG0580024503.01.T01:intron 50.0%
GGAGAGTAACGAACCAAAGG+TGG + Chr5:5729441-5729460 None:intergenic 50.0%
GGTACACTTCTTGGGCCATA+GGG - Chr5:5730057-5730076 MsG0580024503.01.T01:intron 50.0%
GGTGAGTGAGGGAACATTTC+TGG - Chr5:5732311-5732330 MsG0580024503.01.T01:intron 50.0%
GGTTCATCATTGGGACCAGA+TGG - Chr5:5729042-5729061 MsG0580024503.01.T01:CDS 50.0%
GTGACAGTTCAGTGGCACTA+TGG - Chr5:5729901-5729920 MsG0580024503.01.T01:intron 50.0%
GTGGGTCGAGAAAGGAGAAA+TGG + Chr5:5730807-5730826 None:intergenic 50.0%
TAAGCTACGAGGTGAGATGC+TGG - Chr5:5729242-5729261 MsG0580024503.01.T01:CDS 50.0%
TAGTGCCCGAACCAATGACT+CGG + Chr5:5729545-5729564 None:intergenic 50.0%
TTGACTAATCCTCCGACGGA+GGG - Chr5:5731245-5731264 MsG0580024503.01.T01:intron 50.0%
TTGTGGCGTTTGGTTGGAGA+AGG + Chr5:5729117-5729136 None:intergenic 50.0%
TTTGGTTGGAGAAGGAGGTG+AGG + Chr5:5729109-5729128 None:intergenic 50.0%
! ACACGGCAGTGATAGTGATG+AGG + Chr5:5730691-5730710 None:intergenic 50.0%
! AGGGTACTCCGTTGCAAACT+TGG - Chr5:5730076-5730095 MsG0580024503.01.T01:intron 50.0%
! CGTCGACTAGGTCTTGTGTT+AGG + Chr5:5729194-5729213 None:intergenic 50.0%
! CTCCAACCGAGTCATTGGTT+CGG - Chr5:5729536-5729555 MsG0580024503.01.T01:intron 50.0%
! GCATACATAGTGGGGGAACA+CGG - Chr5:5729879-5729898 MsG0580024503.01.T01:intron 50.0%
! GCTTGGTAGAGGAGGTGTAT+TGG - Chr5:5730205-5730224 MsG0580024503.01.T01:intron 50.0%
! GTTTGCAACGGAGTACCCTA+TGG + Chr5:5730075-5730094 None:intergenic 50.0%
!! AACCAATGACTCGGTTGGAG+GGG + Chr5:5729536-5729555 None:intergenic 50.0%
!! CGAATGTAGTGGGTCGAGAA+AGG + Chr5:5730815-5730834 None:intergenic 50.0%
!! GAACCAATGACTCGGTTGGA+GGG + Chr5:5729537-5729556 None:intergenic 50.0%
!! GGAGGATTAGTCAATACCGG+CGG + Chr5:5731239-5731258 None:intergenic 50.0%
!! TCCAACCGAGTCATTGGTTC+GGG - Chr5:5729537-5729556 MsG0580024503.01.T01:intron 50.0%
ACCTCTGCATCGTCACTGCT+GGG - Chr5:5729343-5729362 MsG0580024503.01.T01:intron 55.0%
AGGAGGTGAGGCATGTTGGA+TGG + Chr5:5729097-5729116 None:intergenic 55.0%
GAGAAGGAGGTGAGGCATGT+TGG + Chr5:5729101-5729120 None:intergenic 55.0%
GATCTTAGTGCGGGGAAGGA+AGG + Chr5:5729286-5729305 None:intergenic 55.0%
GGAACACGGTGACAGTTCAG+TGG - Chr5:5729893-5729912 MsG0580024503.01.T01:intron 55.0%
GGGTACACTTCTTGGGCCAT+AGG - Chr5:5730056-5730075 MsG0580024503.01.T01:intron 55.0%
TCGGTCAAACTACCCTCCGT+CGG + Chr5:5731260-5731279 None:intergenic 55.0%
TGGAGGCCTGGATCTTAGTG+CGG + Chr5:5729296-5729315 None:intergenic 55.0%
TGGCGTTTGGTTGGAGAAGG+AGG + Chr5:5729114-5729133 None:intergenic 55.0%
TTCCCCTCCAACCGAGTCAT+TGG - Chr5:5729531-5729550 MsG0580024503.01.T01:intron 55.0%
TTGCCTGCACAGCTTGGTAG+AGG - Chr5:5730194-5730213 MsG0580024503.01.T01:intron 55.0%
! CAAGGACAAGCTCGTCGACT+AGG + Chr5:5729206-5729225 None:intergenic 55.0%
! TTAAGTTCGCGGTGCTGAGG+CGG + Chr5:5730901-5730920 None:intergenic 55.0%
!! ATGTAGTGGTGGATCGACGG+CGG + Chr5:5730867-5730886 None:intergenic 55.0%
!! CGAACCAATGACTCGGTTGG+AGG + Chr5:5729538-5729557 None:intergenic 55.0%
CCTCCTCTACCAAGCTGTGC+AGG + Chr5:5730200-5730219 None:intergenic 60.0%
CCTCTGCATCGTCACTGCTG+GGG - Chr5:5729344-5729363 MsG0580024503.01.T01:intron 60.0%
CCTGCACAGCTTGGTAGAGG+AGG - Chr5:5730197-5730216 MsG0580024503.01.T01:intron 60.0%
CCTGGATCTTAGTGCGGGGA+AGG + Chr5:5729290-5729309 None:intergenic 60.0%
CCTTCCCCGCACTAAGATCC+AGG - Chr5:5729287-5729306 MsG0580024503.01.T01:intron 60.0%
CGACGAAAGAGGACCGGTGT+TGG + Chr5:5730728-5730747 None:intergenic 60.0%
CGGTGCAGGCAACGTAGGAA+TGG - Chr5:5729152-5729171 MsG0580024503.01.T01:CDS 60.0%
CTTAGTGCGGGGAAGGAAGG+CGG + Chr5:5729283-5729302 None:intergenic 60.0%
GACCTCTGCATCGTCACTGC+TGG - Chr5:5729342-5729361 MsG0580024503.01.T01:intron 60.0%
GAGGCCTGGATCTTAGTGCG+GGG + Chr5:5729294-5729313 None:intergenic 60.0%
GCTGGGGCTCGCCAGATTAA+TGG - Chr5:5729360-5729379 MsG0580024503.01.T01:intron 60.0%
GGAGGCCTGGATCTTAGTGC+GGG + Chr5:5729295-5729314 None:intergenic 60.0%
GTCAAACTACCCTCCGTCGG+AGG + Chr5:5731257-5731276 None:intergenic 60.0%
GTGATCGGTGCAGGCAACGT+AGG - Chr5:5729147-5729166 MsG0580024503.01.T01:CDS 60.0%
GTTGTGACTGTAGACGCCGC+CGG - Chr5:5731220-5731239 MsG0580024503.01.T01:intron 60.0%
! CGAAAGAGGACCGGTGTTGG+CGG + Chr5:5730725-5730744 None:intergenic 60.0%
!! GCCCGAACCAATGACTCGGT+TGG + Chr5:5729541-5729560 None:intergenic 60.0%
CCCCAGCAGTGACGATGCAG+AGG + Chr5:5729347-5729366 None:intergenic 65.0%
CCTGAAGCCTGCGACGTCGA+AGG + Chr5:5731299-5731318 None:intergenic 65.0%
CCTTCGACGTCGCAGGCTTC+AGG - Chr5:5731296-5731315 MsG0580024503.01.T01:intron 65.0%
TGACCCATCGCCGCCAACAC+CGG - Chr5:5730712-5730731 MsG0580024503.01.T01:CDS 65.0%
TGGCGGCGATGGGTCAGACA+CGG + Chr5:5730708-5730727 None:intergenic 65.0%
AGTGCGGGGAAGGAAGGCGG+CGG + Chr5:5729280-5729299 None:intergenic 70.0%
GAGGAGGCCTTCGACGTCGC+AGG - Chr5:5731289-5731308 MsG0580024503.01.T01:intron 70.0%
GGTGGATCGACGGCGGAGAG+CGG + Chr5:5730860-5730879 None:intergenic 70.0%
!! AGGACCGGTGTTGGCGGCGA+TGG + Chr5:5730719-5730738 None:intergenic 70.0%
!! GGACCGGTGTTGGCGGCGAT+GGG + Chr5:5730718-5730737 None:intergenic 70.0%
CGGCGACGGCGGTGCAATGG+TGG + Chr5:5730840-5730859 None:intergenic 75.0%
GAGCGGCGACGGCGGTGCAA+TGG + Chr5:5730843-5730862 None:intergenic 75.0%
TCGACGGCGGAGAGCGGCGA+CGG + Chr5:5730854-5730873 None:intergenic 75.0%
! CGCGGTGCTGAGGCGGAGAG+AGG + Chr5:5730894-5730913 None:intergenic 75.0%
! ACGGCGGAGAGCGGCGACGG+CGG + Chr5:5730851-5730870 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
Chr5 gene 5729024 5733986 5729024 ID=MsG0580024503.01;Name=MsG0580024503.01
Chr5 mRNA 5729024 5733986 5729024 ID=MsG0580024503.01.T01;Parent=MsG0580024503.01;Name=MsG0580024503.01.T01;_AED=0.45;_eAED=0.45;_QI=0|0.25|0.2|1|1|1|5|0|491
Chr5 exon 5733378 5733986 5733378 ID=MsG0580024503.01.T01:exon:29124;Parent=MsG0580024503.01.T01
Chr5 exon 5732696 5733131 5732696 ID=MsG0580024503.01.T01:exon:29123;Parent=MsG0580024503.01.T01
Chr5 exon 5730699 5730769 5730699 ID=MsG0580024503.01.T01:exon:29122;Parent=MsG0580024503.01.T01
Chr5 exon 5730465 5730558 5730465 ID=MsG0580024503.01.T01:exon:29121;Parent=MsG0580024503.01.T01
Chr5 exon 5729024 5729289 5729024 ID=MsG0580024503.01.T01:exon:29120;Parent=MsG0580024503.01.T01
Chr5 CDS 5733378 5733986 5733378 ID=MsG0580024503.01.T01:cds;Parent=MsG0580024503.01.T01
Chr5 CDS 5732696 5733131 5732696 ID=MsG0580024503.01.T01:cds;Parent=MsG0580024503.01.T01
Chr5 CDS 5730699 5730769 5730699 ID=MsG0580024503.01.T01:cds;Parent=MsG0580024503.01.T01
Chr5 CDS 5730465 5730558 5730465 ID=MsG0580024503.01.T01:cds;Parent=MsG0580024503.01.T01
Chr5 CDS 5729024 5729289 5729024 ID=MsG0580024503.01.T01:cds;Parent=MsG0580024503.01.T01
Gene Sequence

>MsG0580024503.01.T01

ATGCACAAAAGCATATCAGGTTCATCATTGGGACCAGATGGTTTGGACCTAACTCAATCCTTCTTCAAGTCCATCCAACATGCCTCACCTCCTTCTCCAACCAAACGCCACAACAAGATCTCAGTGATCGGTGCAGGCAACGTAGGAATGGCTATAGCTCAAACCATCCTAACACAAGACCTAGTCGACGAGCTTGTCCTTGTCGACGCTATTCCTGATAAGCTACGAGGTGAGATGCTGGATCTACAGCATGCCGCCGCCTTCCTTCCCCGCACTAAGATCCAGGCCTCCACTGATTATTCAGTGACGATGGGGTCTGACCTCTGCATCGTCACTGCTGGGGCTCGCCAGATTAATGGCGAGTCCAGATTGAATTTGCTACAAAGGAATGTTGCTTTGTTTAAAAAAATTATACCACCTTTGGTTCGTTACTCTCCTCATTGTGTTCTTCTAATTGTTTCCAATCCTGTTGATGTGCTCACTTACATTGCTTGGAAACTCTCTGGTTTCCCCTCCAACCGAGTCATTGGTTCGGGCACTAATTTGGATTCCTCTCGCTTCCGTTTCCTTATTGCTGATCATCTTGATGTTAATGCTCAAGATGTGCAGGCATACATAGTGGGGGAACACGGTGACAGTTCAGTGGCACTATGGTCAAGCATTAGTGTTGGAGGTGTTCCAGTGCTAAGCTTTTTGGAGAAACAACAAATAGCTTACGAGAAAGAAATGCTAGAGAACATACACAAGGAGGTTATAAACGGCGCATATGAAGTGATCAGTTTAAAAGGGTACACTTCTTGGGCCATAGGGTACTCCGTTGCAAACTTGGCTCGAACAATTATGAGGAACCAAAGGAAGATTCACCCTGTTTCAGTTCTTGCAAAGGGATTTTATGGCATTGATGGTGGAGAAGTGTTTATTAGTTTGCCTGCACAGCTTGGTAGAGGAGGTGTATTGGGTGTGACTAATATTCATATGACTGAAGAGGAGATGAAGAGGCTTAGGGACTCTGCTATCACTATTCTTGAGTTGCAGAATCAGTTGGCCTGTGTCATTGAGAATAAGATGATAGTGTTTGGTGGTGAATCTGGAAATGGATTGCTAGATGAGATGCAGGTTCTAAATTTTGACAAATTTTCATGGACCGCTGTGTCATCTAAGCTATACTTGTCACCAAGTAGTCTGCCGTTACAGATTCCAGTTTGCAAGGAAGGGAGAGCAGAGTTGTTAAATGATGGAGCAGGATTGGCTATTGTGTCAAAGAAAATTTTGAGGGTTTCTCATGTTGCAAGTGATAGAGGTGTTAGAATTATGAGTTCTATTTGTAGGCATTCTGCAAATTCTAGAGTTTTACATGAAATGTTGCGTGTTGGAGGAGTTTCAAAGTTGTGTTTGGTGCTTCAAGTTGATAGTAATTTCAAGACAAAAGAGAGGGCTAAGGAGATACTCAAACATGTAAATGATATGGCTAACTAA
Protein sequence

>MsG0580024503.01.T01

MHKSISGSSLGPDGLDLTQSFFKSIQHASPPSPTKRHNKISVIGAGNVGMAIAQTILTQDLVDELVLVDAIPDKLRGEMLDLQHAAAFLPRTKIQASTDYSVTMGSDLCIVTAGARQINGESRLNLLQRNVALFKKIIPPLVRYSPHCVLLIVSNPVDVLTYIAWKLSGFPSNRVIGSGTNLDSSRFRFLIADHLDVNAQDVQAYIVGEHGDSSVALWSSISVGGVPVLSFLEKQQIAYEKEMLENIHKEVINGAYEVISLKGYTSWAIGYSVANLARTIMRNQRKIHPVSVLAKGFYGIDGGEVFISLPAQLGRGGVLGVTNIHMTEEEMKRLRDSAITILELQNQLACVIENKMIVFGGESGNGLLDEMQVLNFDKFSWTAVSSKLYLSPSSLPLQIPVCKEGRAELLNDGAGLAIVSKKILRVSHVASDRGVRIMSSICRHSANSRVLHEMLRVGGVSKLCLVLQVDSNFKTKERAKEILKHVNDMAN*