AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580025012.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580025012.01.T01 MTR_5g021150 89.826 344 29 1 80 423 360 697 0.0 633
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580025012.01.T01 AT3G51050 72.136 323 83 2 99 420 380 696 1.91e-170 494

Find 167 sgRNAs with CRISPR-Local

Find 261 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATGTTGGAATAAGTTAAAA+TGG 0.250294 5:+12815661 None:intergenic
TAGCCAGGCTTTGGGGTATT+TGG 0.252739 5:-12817169 MsG0580025012.01.T01:CDS
TGAGTGAGAGGCCCATTATT+TGG 0.264500 5:-12817389 MsG0580025012.01.T01:CDS
TTAGTAGTGGAAGGAATATA+TGG 0.275953 5:-12817299 MsG0580025012.01.T01:CDS
TTCTAGTTTAGCCAGGCTTT+GGG 0.280180 5:-12817177 MsG0580025012.01.T01:intron
TTCATACACCCTCCAAATAA+TGG 0.290169 5:+12817377 None:intergenic
CTTATTCTTGTCACCTCTTC+CGG 0.293199 5:-12815006 MsG0580025012.01.T01:CDS
ATTCTAGTTTAGCCAGGCTT+TGG 0.304117 5:-12817178 MsG0580025012.01.T01:intron
AGAGAGGAGAGAAGGGACTA+AGG 0.315327 5:-12817344 MsG0580025012.01.T01:CDS
AGGTTCAGATATGTCTTCTT+TGG 0.326448 5:-12815613 MsG0580025012.01.T01:CDS
TGCTTGTGACCATCGCTTCT+AGG 0.330305 5:+12815567 None:intergenic
AGATGAGCCACGACAACATT+AGG 0.330385 5:+12816249 None:intergenic
TTTATCTCAGCTTCACCTTC+AGG 0.331432 5:-12815989 MsG0580025012.01.T01:intron
GAGCACCAGGTTGTCGGGTC+TGG 0.344637 5:+12814968 None:intergenic
CCTGGTGTGGTTGAAGCGTT+GGG 0.354161 5:-12817047 MsG0580025012.01.T01:CDS
TGTTGGGCTGTTGCAACGTC+TGG 0.363491 5:-12815732 MsG0580025012.01.T01:CDS
TGGATGTTCTACGTCCTTGT+TGG 0.368359 5:-12815749 MsG0580025012.01.T01:CDS
GGTCTACATGCTGATATTAA+TGG 0.378282 5:-12815961 MsG0580025012.01.T01:CDS
AACCTTAGTATAGTTGGTTA+TGG 0.378610 5:+12816281 None:intergenic
AATCAGGCTGTTGGAGGAAA+TGG 0.379180 5:-12815801 MsG0580025012.01.T01:intron
GTCACCTCTTCCGGAGTGTA+TGG 0.379714 5:-12814997 MsG0580025012.01.T01:CDS
CCTTCATGGAATTTATGTGC+TGG 0.383755 5:+12814887 None:intergenic
TCCTGGTGTGGTTGAAGCGT+TGG 0.384562 5:-12817048 MsG0580025012.01.T01:CDS
TGGACGAGGCTTCCCCTTCA+TGG 0.388131 5:+12814873 None:intergenic
CGTGAAGACTTCTCGAATGA+TGG 0.409495 5:-12815039 MsG0580025012.01.T01:CDS
TATTAATGGTGATGGAGTTC+TGG 0.409951 5:-12815947 MsG0580025012.01.T01:CDS
GGGGATAGAAGCCCTTCATT+TGG 0.415834 5:-12816220 MsG0580025012.01.T01:CDS
TCATACACCCTCCAAATAAT+GGG 0.432012 5:+12817378 None:intergenic
GAAGCCCTTCATTTGGCATC+TGG 0.435082 5:-12816213 MsG0580025012.01.T01:CDS
CGGAAGAGGTGACAAGAATA+AGG 0.435916 5:+12815007 None:intergenic
TGCACAGTTTCATGTACTCC+TGG 0.436808 5:-12817065 MsG0580025012.01.T01:CDS
CCACCAAACCTTAGTATAGT+TGG 0.437688 5:+12816275 None:intergenic
AGGGATGATGGAAGGTGGTT+TGG 0.441586 5:-12815214 MsG0580025012.01.T01:CDS
CAACATGGAGAACTTTATAG+AGG 0.443685 5:-12815645 MsG0580025012.01.T01:CDS
TGCATGGTCATGATGCTGTT+TGG 0.445456 5:-12815287 MsG0580025012.01.T01:CDS
GGATGTTCTACGTCCTTGTT+GGG 0.451946 5:-12815748 MsG0580025012.01.T01:CDS
GGGAAGCCTCGTCCATCATC+TGG 0.453114 5:-12814865 MsG0580025012.01.T01:CDS
TCGTGCAACCGCAAAGGAAA+AGG 0.455782 5:+12815174 None:intergenic
GAGAGGAGAGAAGGGACTAA+GGG 0.457093 5:-12817343 MsG0580025012.01.T01:CDS
ATTGCTATTCTAGTTTAGCC+AGG 0.458971 5:-12817184 MsG0580025012.01.T01:intron
CACCATAACCAACTATACTA+AGG 0.462046 5:-12816283 MsG0580025012.01.T01:CDS
CCACCTTCCATCATCCCTGC+TGG 0.462762 5:+12815219 None:intergenic
GAAGAGAGCACCAGGTTGTC+GGG 0.463435 5:+12814963 None:intergenic
CTTAGTATAGTTGGTTATGG+TGG 0.463949 5:+12816284 None:intergenic
ACCTTCCCCAGCAGGGATGA+TGG 0.464866 5:-12815226 MsG0580025012.01.T01:CDS
ATCACCCGGAGGTAGCATAT+TGG 0.465330 5:-12815103 MsG0580025012.01.T01:CDS
TTCAGATATGTCTTCTTTGG+AGG 0.466617 5:-12815610 MsG0580025012.01.T01:CDS
TTGAAAAGTTGTTCCCGTAC+TGG 0.469544 5:+12815705 None:intergenic
TAACCAACTATACTAAGGTT+TGG 0.475404 5:-12816278 MsG0580025012.01.T01:CDS
TAGTAGTGGAAGGAATATAT+GGG 0.476297 5:-12817298 MsG0580025012.01.T01:CDS
GAAGCGATGGTCACAAGCAC+AGG 0.476863 5:-12815563 MsG0580025012.01.T01:CDS
TGTAGCCAATATGCTACCTC+CGG 0.480751 5:+12815098 None:intergenic
CAGTTGGAAGGTTCAATTGT+GGG 0.484189 5:-12817110 MsG0580025012.01.T01:CDS
TCAAATCTACCTTCCCCAGC+AGG 0.485510 5:-12815234 MsG0580025012.01.T01:CDS
AATACATGTGTAGGTGGACC+AGG 0.487837 5:+12815066 None:intergenic
CTTCATGGAATTTATGTGCT+GGG 0.489382 5:+12814888 None:intergenic
ATTTCTAATCAGGCTGTTGG+AGG 0.489656 5:-12815807 MsG0580025012.01.T01:intron
AACGTCTGGCGTACCAGTAC+GGG 0.490568 5:-12815718 MsG0580025012.01.T01:CDS
ATCTGGTCGAACACTATGTA+AGG 0.497608 5:-12816196 MsG0580025012.01.T01:intron
CACCTTCCATCATCCCTGCT+GGG 0.500048 5:+12815220 None:intergenic
CAACGTCTGGCGTACCAGTA+CGG 0.501097 5:-12815719 MsG0580025012.01.T01:CDS
TTGGTTATGGTGGGAACGTA+TGG 0.504272 5:+12816294 None:intergenic
TTCGACCAGATGCCAAATGA+AGG 0.505004 5:+12816208 None:intergenic
TGTTGTCGTGGCTCATCTAA+AGG 0.505582 5:-12816244 MsG0580025012.01.T01:CDS
CAGATAACTGCGTACACTCC+TGG 0.506469 5:-12815312 MsG0580025012.01.T01:CDS
CGGCTGTCTCATAGTCGTGA+TGG 0.507527 5:-12814926 MsG0580025012.01.T01:CDS
CAACTATACTAAGGTTTGGT+GGG 0.512198 5:-12816274 MsG0580025012.01.T01:CDS
GGGAAGAAGAGAGGAGAGAA+GGG 0.513212 5:-12817351 MsG0580025012.01.T01:CDS
ATCGCTTCTAGGAATGAGAA+TGG 0.515104 5:+12815578 None:intergenic
AACTGTAGTTAGTGGGTCCA+TGG 0.515264 5:-12815769 MsG0580025012.01.T01:CDS
AAGATTTCTAATCAGGCTGT+TGG 0.517756 5:-12815810 MsG0580025012.01.T01:intron
ATGTTGGAATAAGTTAAAAT+GGG 0.518543 5:+12815662 None:intergenic
CTCTTCTTCAGTGTGCTGAT+CGG 0.521220 5:-12814946 MsG0580025012.01.T01:CDS
AGAAGAGAGCACCAGGTTGT+CGG 0.521482 5:+12814962 None:intergenic
CTCGTCCATCATCTGGTCCT+AGG 0.521879 5:-12814858 MsG0580025012.01.T01:CDS
TGGGAAGAAGAGAGGAGAGA+AGG 0.522142 5:-12817352 MsG0580025012.01.T01:CDS
TCCATCATCCCTGCTGGGGA+AGG 0.527584 5:+12815225 None:intergenic
GTTATGGTGGGAACGTATGG+TGG 0.528881 5:+12816297 None:intergenic
CATGAGATGATCCTTGCAGC+TGG 0.529304 5:-12815147 MsG0580025012.01.T01:CDS
CTCTATAAAGTTCTCCATGT+TGG 0.529957 5:+12815646 None:intergenic
CCAACTATACTAAGGTTTGG+TGG 0.533620 5:-12816275 MsG0580025012.01.T01:CDS
TGGCAGTGGCAACAATCAAC+TGG 0.535011 5:-12815267 MsG0580025012.01.T01:CDS
TATGAACGTGGGAAGAAGAG+AGG 0.536003 5:-12817360 MsG0580025012.01.T01:CDS
CATCATTCGAGAAGTCTTCA+CGG 0.537864 5:+12815040 None:intergenic
CATGCTGATATTAATGGTGA+TGG 0.542764 5:-12815955 MsG0580025012.01.T01:CDS
CTACTAACTAACTGCCAGCT+AGG 0.543784 5:+12817315 None:intergenic
TTAGTATAGTTGGTTATGGT+GGG 0.544259 5:+12816285 None:intergenic
GGGTATTTGGTTATCTACCT+CGG 0.547888 5:-12817156 MsG0580025012.01.T01:CDS
GTGAAGACTTCTCGAATGAT+GGG 0.548657 5:-12815038 MsG0580025012.01.T01:CDS
TAACCAAATACCCCAAAGCC+TGG 0.549215 5:+12817166 None:intergenic
TGGAGTTCTGGATCATGTGC+AGG 0.552596 5:-12815935 MsG0580025012.01.T01:intron
GCTGAGCAAACTGTAGTTAG+TGG 0.552735 5:-12815777 MsG0580025012.01.T01:CDS
CCAGCACATAAATTCCATGA+AGG 0.553076 5:-12814887 MsG0580025012.01.T01:CDS
GCATCATGACCATGCAAACC+AGG 0.553331 5:+12815294 None:intergenic
TCTAGTTTAGCCAGGCTTTG+GGG 0.556266 5:-12817176 MsG0580025012.01.T01:intron
AAGCACAGGAAGGGAAGCCA+TGG 0.561268 5:-12815549 MsG0580025012.01.T01:CDS
AGCTGGAGAACAAGAGGCTG+TGG 0.561335 5:-12815130 MsG0580025012.01.T01:CDS
GGCAGTTAGTTAGTAGTGGA+AGG 0.561760 5:-12817308 MsG0580025012.01.T01:CDS
GGCTGTCTCATAGTCGTGAT+GGG 0.565766 5:-12814925 MsG0580025012.01.T01:CDS
CCTAAAATGATGCAGTTGGA+AGG 0.571228 5:-12817122 MsG0580025012.01.T01:CDS
CTTTATAGAGGCTTCAACCG+AGG 0.572173 5:-12815633 MsG0580025012.01.T01:CDS
GTGAGAGGCCCATTATTTGG+AGG 0.572619 5:-12817386 MsG0580025012.01.T01:CDS
CCCAACGCTTCAACCACACC+AGG 0.573386 5:+12817047 None:intergenic
AAAGCCATACACTCCGGAAG+AGG 0.574413 5:+12814993 None:intergenic
CTGGTGTGGTTGAAGCGTTG+GGG 0.574696 5:-12817046 MsG0580025012.01.T01:CDS
AGCTGGCAGTTAGTTAGTAG+TGG 0.575783 5:-12817312 MsG0580025012.01.T01:CDS
TTTGTCCAGACCCGACAACC+TGG 0.576436 5:-12814973 MsG0580025012.01.T01:CDS
CAGCTTCACCTTCAGGAAGG+TGG 0.577873 5:-12815982 MsG0580025012.01.T01:CDS
TGAGAGGCCCATTATTTGGA+GGG 0.580206 5:-12817385 MsG0580025012.01.T01:CDS
GCGTACACTCCTGGTTTGCA+TGG 0.580754 5:-12815303 MsG0580025012.01.T01:CDS
GTAGCCAATATGCTACCTCC+GGG 0.582821 5:+12815099 None:intergenic
CCTTGCAGCTGGAGAACAAG+AGG 0.583958 5:-12815136 MsG0580025012.01.T01:CDS
TTTGGAGGGTGTATGAACGT+GGG 0.585732 5:-12817371 MsG0580025012.01.T01:CDS
GTCATGATGCTGTTTGGCAG+TGG 0.587708 5:-12815281 MsG0580025012.01.T01:CDS
CTGAGCAAACTGTAGTTAGT+GGG 0.588360 5:-12815776 MsG0580025012.01.T01:CDS
TTGGCTACAATTGAACTCCC+TGG 0.589134 5:-12815084 MsG0580025012.01.T01:CDS
TTATCTACCTCGGAGAAGCT+AGG 0.589207 5:-12817146 MsG0580025012.01.T01:CDS
AGAGGAGAGAAGGGACTAAG+GGG 0.589672 5:-12817342 MsG0580025012.01.T01:CDS
CGATGGTCACAAGCACAGGA+AGG 0.589794 5:-12815559 MsG0580025012.01.T01:CDS
ACAAGGACGTAGAACATCCA+TGG 0.589938 5:+12815752 None:intergenic
TCGCTTCTAGGAATGAGAAT+GGG 0.590286 5:+12815579 None:intergenic
ACACTGAAGAAGAGAGCACC+AGG 0.591749 5:+12814955 None:intergenic
GTCGTGGCTCATCTAAAGGA+GGG 0.592110 5:-12816240 MsG0580025012.01.T01:CDS
CCTCTTGTTCTCCAGCTGCA+AGG 0.594983 5:+12815136 None:intergenic
AATTGTGGGAGTCTCTATGT+TGG 0.596553 5:-12817096 MsG0580025012.01.T01:CDS
AACAATCAACTGGTGTCACA+TGG 0.598090 5:-12815257 MsG0580025012.01.T01:CDS
ATTCTCATTCCTAGAAGCGA+TGG 0.601076 5:-12815576 MsG0580025012.01.T01:CDS
TCACGGATCAATACATGTGT+AGG 0.601651 5:+12815057 None:intergenic
CAAATCTACCTTCCCCAGCA+GGG 0.601892 5:-12815233 MsG0580025012.01.T01:CDS
TTTCACCTAGGACCAGATGA+TGG 0.602090 5:+12814853 None:intergenic
CAGCACATAAATTCCATGAA+GGG 0.602120 5:-12814886 MsG0580025012.01.T01:CDS
GGCTCAAGTAAATGAGTGAG+AGG 0.603453 5:-12817401 None:intergenic
AGGTCCTAAAATGATGCAGT+TGG 0.604295 5:-12817126 MsG0580025012.01.T01:CDS
TCTCAGCTTCACCTTCAGGA+AGG 0.607541 5:-12815985 MsG0580025012.01.T01:intron
TCCCCAGCAGGGATGATGGA+AGG 0.608108 5:-12815222 MsG0580025012.01.T01:CDS
CATGTAGACCACCTTCCTGA+AGG 0.610666 5:+12815974 None:intergenic
GTGGGTTCCTAATGTTGTCG+TGG 0.610824 5:-12816256 MsG0580025012.01.T01:CDS
TCAGGTTCTGCATTTCACCT+AGG 0.610929 5:+12814841 None:intergenic
AAAGGAAAAGGCTTTAGTGT+GGG 0.615804 5:+12815186 None:intergenic
TGATTGTCGTGCAACCGCAA+AGG 0.617981 5:+12815168 None:intergenic
TGGTGTGGTTGAAGCGTTGG+GGG 0.618639 5:-12817045 MsG0580025012.01.T01:intron
ATTTGGAGGGTGTATGAACG+TGG 0.618699 5:-12817372 MsG0580025012.01.T01:CDS
AGCACATAAATTCCATGAAG+GGG 0.620604 5:-12814885 MsG0580025012.01.T01:CDS
CAAAGGAAAAGGCTTTAGTG+TGG 0.621808 5:+12815185 None:intergenic
AGTTTCATGTACTCCTGGTG+TGG 0.622572 5:-12817060 MsG0580025012.01.T01:CDS
GATGGTCACAAGCACAGGAA+GGG 0.623068 5:-12815558 MsG0580025012.01.T01:CDS
ACCTTCCATCATCCCTGCTG+GGG 0.625590 5:+12815221 None:intergenic
TAGTGGAAGGAATATATGGG+AGG 0.626767 5:-12817295 MsG0580025012.01.T01:CDS
CGGATCAATACATGTGTAGG+TGG 0.626900 5:+12815060 None:intergenic
CTAGGACCAGATGATGGACG+AGG 0.627570 5:+12814859 None:intergenic
GACGTTGCAACAGCCCAACA+AGG 0.629896 5:+12815735 None:intergenic
CCAGCAGGGATGATGGAAGG+TGG 0.632400 5:-12815219 MsG0580025012.01.T01:CDS
AGCACAGGAAGGGAAGCCAT+GGG 0.633343 5:-12815548 MsG0580025012.01.T01:CDS
GAGGAGAGAAGGGACTAAGG+GGG 0.634193 5:-12817341 MsG0580025012.01.T01:CDS
GTCAAGAAGATAACGTCCCA+TGG 0.634786 5:+12815532 None:intergenic
TGTCGTGGCTCATCTAAAGG+AGG 0.645066 5:-12816241 MsG0580025012.01.T01:CDS
TCGACCAGATGCCAAATGAA+GGG 0.648003 5:+12816209 None:intergenic
GAGGCTGTGGTAATATCACC+CGG 0.649171 5:-12815117 MsG0580025012.01.T01:CDS
AAGAAGACATATCTGAACCT+CGG 0.655110 5:+12815616 None:intergenic
AATATATGGGAGGTAGCACG+AGG 0.669768 5:-12817285 MsG0580025012.01.T01:CDS
TCGTGGCTCATCTAAAGGAG+GGG 0.676739 5:-12816239 MsG0580025012.01.T01:CDS
ATACATGTGTAGGTGGACCA+GGG 0.684493 5:+12815067 None:intergenic
CTGGACAAAGCCATACACTC+CGG 0.697857 5:+12814987 None:intergenic
GCAGTTGGAAGGTTCAATTG+TGG 0.705984 5:-12817111 MsG0580025012.01.T01:CDS
TTTAGGACCTAGCTTCTCCG+AGG 0.716811 5:+12817139 None:intergenic
ATATATGGGAGGTAGCACGA+GGG 0.781016 5:-12817284 MsG0580025012.01.T01:CDS
GCTGTGGTAATATCACCCGG+AGG 0.808322 5:-12815114 MsG0580025012.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAGAAAGAAAA+AGG + Chr5:12815871-12815890 None:intergenic 10.0%
!! TTTATATGCATTATAATATT+TGG + Chr5:12815602-12815621 None:intergenic 10.0%
!! TTGTTAAATATACTTATTGA+TGG - Chr5:12815736-12815755 MsG0580025012.01.T01:CDS 15.0%
!!! AAGTTACAACTAATATATTT+TGG - Chr5:12816854-12816873 MsG0580025012.01.T01:intron 15.0%
!!! ATGAACAATTTTTATAAAGT+CGG + Chr5:12816911-12816930 None:intergenic 15.0%
!! AATGCATATAAAACAATTTG+AGG - Chr5:12815610-12815629 MsG0580025012.01.T01:CDS 20.0%
!! ATGCTAAATTAATAAAGATC+TGG + Chr5:12816375-12816394 None:intergenic 20.0%
!! ATGTTGGAATAAGTTAAAAT+GGG + Chr5:12816586-12816605 None:intergenic 20.0%
!! ATTCATTTAAACAAACAACT+AGG + Chr5:12815548-12815567 None:intergenic 20.0%
!! GTATTGGATACATATTTATT+GGG - Chr5:12815346-12815365 MsG0580025012.01.T01:CDS 20.0%
!! TATTGGATACATATTTATTG+GGG - Chr5:12815347-12815366 MsG0580025012.01.T01:CDS 20.0%
!! TTGTTAAACAAATATGAACT+AGG + Chr5:12816826-12816845 None:intergenic 20.0%
!! TTTGTTTATCAAAAATGTGA+AGG + Chr5:12816348-12816367 None:intergenic 20.0%
!!! AGTATTGGATACATATTTAT+TGG - Chr5:12815345-12815364 MsG0580025012.01.T01:CDS 20.0%
!!! ATAAAATGTATGGCATTTTA+TGG - Chr5:12815833-12815852 MsG0580025012.01.T01:intron 20.0%
!!! ATGATAATTGATAACGTAAT+GGG - Chr5:12816393-12816412 MsG0580025012.01.T01:intron 20.0%
!!! CTTTCTTTTTTTTTTTACCA+GGG - Chr5:12815875-12815894 MsG0580025012.01.T01:intron 20.0%
!!! TAAAATGTATGGCATTTTAT+GGG - Chr5:12815834-12815853 MsG0580025012.01.T01:intron 20.0%
!!! TCTTTCTTTTTTTTTTTACC+AGG - Chr5:12815874-12815893 MsG0580025012.01.T01:intron 20.0%
!!! TTGTCATAATGTTTTTCTTT+TGG - Chr5:12815915-12815934 MsG0580025012.01.T01:intron 20.0%
!!! TTTTTATAAAGTCGGTATAA+AGG + Chr5:12816903-12816922 None:intergenic 20.0%
! AAGCACTAAATTATTAGAAG+AGG + Chr5:12815579-12815598 None:intergenic 25.0%
! AGCACTAAATTATTAGAAGA+GGG + Chr5:12815578-12815597 None:intergenic 25.0%
! CATGTTGGAATAAGTTAAAA+TGG + Chr5:12816587-12816606 None:intergenic 25.0%
! TTCTCATGTTATTGCTTAAT+CGG - Chr5:12815799-12815818 MsG0580025012.01.T01:intron 25.0%
!! TTAAAGCATTAGAGTCTTAT+TGG + Chr5:12815388-12815407 None:intergenic 25.0%
!!! CATGATAATTGATAACGTAA+TGG - Chr5:12816392-12816411 MsG0580025012.01.T01:intron 25.0%
!!! CATTTTAACTTATTCCAACA+TGG - Chr5:12816585-12816604 MsG0580025012.01.T01:intron 25.0%
!!! CTAGTGTGCATTTTTTTTTT+GGG - Chr5:12815248-12815267 MsG0580025012.01.T01:CDS 25.0%
!!! TGATAATTGATAACGTAATG+GGG - Chr5:12816394-12816413 MsG0580025012.01.T01:intron 25.0%
AAAGAAAGAAAAAGGCTTCT+CGG + Chr5:12815863-12815882 None:intergenic 30.0%
AACCTTAGTATAGTTGGTTA+TGG + Chr5:12815967-12815986 None:intergenic 30.0%
AAGGGGTTCTATAAAATGTA+TGG - Chr5:12815823-12815842 MsG0580025012.01.T01:intron 30.0%
ACGTTATCTTCTTGACAAAT+CGG - Chr5:12816720-12816739 MsG0580025012.01.T01:intron 30.0%
ATGTTATTGCTTAATCGGAA+AGG - Chr5:12815804-12815823 MsG0580025012.01.T01:intron 30.0%
GATACATATTTATTGGGGTT+AGG - Chr5:12815352-12815371 MsG0580025012.01.T01:CDS 30.0%
GATTATCTGTTCTTAGGTTA+AGG - Chr5:12815632-12815651 MsG0580025012.01.T01:CDS 30.0%
GATTGAATAACTTTCTTCTG+AGG - Chr5:12815003-12815022 MsG0580025012.01.T01:CDS 30.0%
TAACCAACTATACTAAGGTT+TGG - Chr5:12815967-12815986 MsG0580025012.01.T01:CDS 30.0%
TAGCAATGAAATCACTATGA+TGG + Chr5:12815048-12815067 None:intergenic 30.0%
TGTCTGAAAGATTTCTAATC+AGG - Chr5:12816428-12816447 MsG0580025012.01.T01:intron 30.0%
TGTTATTGCTTAATCGGAAA+GGG - Chr5:12815805-12815824 MsG0580025012.01.T01:intron 30.0%
TTAGAAATCTTTCAGACATC+AGG + Chr5:12816426-12816445 None:intergenic 30.0%
TTAGTATAGTTGGTTATGGT+GGG + Chr5:12815963-12815982 None:intergenic 30.0%
TTTGAGGATTATCTGTTCTT+AGG - Chr5:12815626-12815645 MsG0580025012.01.T01:CDS 30.0%
TTTGTAGTATTAAACTGCAC+TGG - Chr5:12816161-12816180 MsG0580025012.01.T01:intron 30.0%
! AGATGAAGTACTTCATGTTT+GGG - Chr5:12815503-12815522 MsG0580025012.01.T01:intron 30.0%
! GTGACAGCTAAATAAGATTT+TGG + Chr5:12816193-12816212 None:intergenic 30.0%
! TAGTAGTGGAAGGAATATAT+GGG - Chr5:12814947-12814966 MsG0580025012.01.T01:CDS 30.0%
! TTAAGGTACTTCATGAAACA+TGG - Chr5:12815649-12815668 MsG0580025012.01.T01:CDS 30.0%
! TTAGTAGTGGAAGGAATATA+TGG - Chr5:12814946-12814965 MsG0580025012.01.T01:CDS 30.0%
!! ATGAACTAGGTTAGTTTGAT+TGG + Chr5:12816813-12816832 None:intergenic 30.0%
!! GATAATTGATAACGTAATGG+GGG - Chr5:12816395-12816414 MsG0580025012.01.T01:intron 30.0%
!!! CTTTTTTTTTTTACCAGGGT+GGG - Chr5:12815879-12815898 MsG0580025012.01.T01:intron 30.0%
!!! GCTAGTGTGCATTTTTTTTT+TGG - Chr5:12815247-12815266 MsG0580025012.01.T01:CDS 30.0%
!!! TCGATTTTCAAGTTAATCAG+TGG + Chr5:12816086-12816105 None:intergenic 30.0%
!!! TCTTTTTTTTTTTACCAGGG+TGG - Chr5:12815878-12815897 MsG0580025012.01.T01:intron 30.0%
!!! TGTGCATTTTTTTTTTGGGT+GGG - Chr5:12815252-12815271 MsG0580025012.01.T01:CDS 30.0%
!!! TTTTTTTTTTTACCAGGGTG+GGG - Chr5:12815880-12815899 MsG0580025012.01.T01:intron 30.0%
AAGAAGACATATCTGAACCT+CGG + Chr5:12816632-12816651 None:intergenic 35.0%
AAGATTTCTAATCAGGCTGT+TGG - Chr5:12816435-12816454 MsG0580025012.01.T01:intron 35.0%
AGCACATAAATTCCATGAAG+GGG - Chr5:12817360-12817379 MsG0580025012.01.T01:CDS 35.0%
AGGTTCAGATATGTCTTCTT+TGG - Chr5:12816632-12816651 MsG0580025012.01.T01:intron 35.0%
ATATTTATTGGGGTTAGGAG+AGG - Chr5:12815357-12815376 MsG0580025012.01.T01:CDS 35.0%
ATCTACCAGTTTAACCCATA+TGG + Chr5:12815449-12815468 None:intergenic 35.0%
CAACATGGAGAACTTTATAG+AGG - Chr5:12816600-12816619 MsG0580025012.01.T01:intron 35.0%
CACCATAACCAACTATACTA+AGG - Chr5:12815962-12815981 MsG0580025012.01.T01:CDS 35.0%
CAGCACATAAATTCCATGAA+GGG - Chr5:12817359-12817378 MsG0580025012.01.T01:CDS 35.0%
CATGCTGATATTAATGGTGA+TGG - Chr5:12816290-12816309 MsG0580025012.01.T01:CDS 35.0%
CGTTATCTTCTTGACAAATC+GGG - Chr5:12816721-12816740 MsG0580025012.01.T01:intron 35.0%
CTCTATAAAGTTCTCCATGT+TGG + Chr5:12816602-12816621 None:intergenic 35.0%
CTTAGTATAGTTGGTTATGG+TGG + Chr5:12815964-12815983 None:intergenic 35.0%
CTTCATGGAATTTATGTGCT+GGG + Chr5:12817360-12817379 None:intergenic 35.0%
GGTCTACATGCTGATATTAA+TGG - Chr5:12816284-12816303 MsG0580025012.01.T01:CDS 35.0%
GTTATCTTCTTGACAAATCG+GGG - Chr5:12816722-12816741 MsG0580025012.01.T01:intron 35.0%
GTTATTGCTTAATCGGAAAG+GGG - Chr5:12815806-12815825 MsG0580025012.01.T01:intron 35.0%
GTTCATATGGTGCAGATATT+GGG - Chr5:12815284-12815303 MsG0580025012.01.T01:CDS 35.0%
TACTACAAATCTACAACCAC+AGG + Chr5:12816150-12816169 None:intergenic 35.0%
TATCGGTACTTATGCAGTAT+TGG - Chr5:12815330-12815349 MsG0580025012.01.T01:CDS 35.0%
TCATACACCCTCCAAATAAT+GGG + Chr5:12814870-12814889 None:intergenic 35.0%
TTCAGATATGTCTTCTTTGG+AGG - Chr5:12816635-12816654 MsG0580025012.01.T01:intron 35.0%
TTCATACACCCTCCAAATAA+TGG + Chr5:12814871-12814890 None:intergenic 35.0%
TTTCGACCAAGTTATTGCTT+TGG + Chr5:12815688-12815707 None:intergenic 35.0%
! AAAGGAAAAGGCTTTAGTGT+GGG + Chr5:12817062-12817081 None:intergenic 35.0%
! AACATGAAGTACTTCATCTG+TGG + Chr5:12815502-12815521 None:intergenic 35.0%
! ACATGAAGTACTTCATCTGT+GGG + Chr5:12815501-12815520 None:intergenic 35.0%
! CAACTATACTAAGGTTTGGT+GGG - Chr5:12815971-12815990 MsG0580025012.01.T01:CDS 35.0%
! CAGATGAAGTACTTCATGTT+TGG - Chr5:12815502-12815521 MsG0580025012.01.T01:intron 35.0%
! GATGAAGTACTTCATGTTTG+GGG - Chr5:12815504-12815523 MsG0580025012.01.T01:intron 35.0%
!! ATTGCTATTCTAGTTTAGCC+AGG - Chr5:12815061-12815080 MsG0580025012.01.T01:CDS 35.0%
!! TATTAATGGTGATGGAGTTC+TGG - Chr5:12816298-12816317 MsG0580025012.01.T01:CDS 35.0%
!!! GTGCATTTTTTTTTTGGGTG+GGG - Chr5:12815253-12815272 MsG0580025012.01.T01:CDS 35.0%
!!! GTGTGCATTTTTTTTTTGGG+TGG - Chr5:12815251-12815270 MsG0580025012.01.T01:CDS 35.0%
!!! TGCATTTTTTTTTTGGGTGG+GGG - Chr5:12815254-12815273 MsG0580025012.01.T01:CDS 35.0%
!!! TTTTTTTTTTACCAGGGTGG+GGG - Chr5:12815881-12815900 MsG0580025012.01.T01:intron 35.0%
AATTGTGGGAGTCTCTATGT+TGG - Chr5:12815149-12815168 MsG0580025012.01.T01:CDS 40.0%
ACCAGTTTAACCCATATGGT+TGG + Chr5:12815445-12815464 None:intergenic 40.0%
ACGAGGGAATGATTAGTATG+AGG - Chr5:12814977-12814996 MsG0580025012.01.T01:CDS 40.0%
AGGGAATGATTAGTATGAGG+AGG - Chr5:12814980-12814999 MsG0580025012.01.T01:CDS 40.0%
AGGTCCTAAAATGATGCAGT+TGG - Chr5:12815119-12815138 MsG0580025012.01.T01:CDS 40.0%
ATATTGGGCAAATGTGTGGT+TGG - Chr5:12815299-12815318 MsG0580025012.01.T01:CDS 40.0%
ATCTGGTCGAACACTATGTA+AGG - Chr5:12816049-12816068 MsG0580025012.01.T01:intron 40.0%
ATTCTCATTCCTAGAAGCGA+TGG - Chr5:12816669-12816688 MsG0580025012.01.T01:intron 40.0%
ATTTCTAATCAGGCTGTTGG+AGG - Chr5:12816438-12816457 MsG0580025012.01.T01:intron 40.0%
CAGTTGGAAGGTTCAATTGT+GGG - Chr5:12815135-12815154 MsG0580025012.01.T01:CDS 40.0%
CATCATTCGAGAAGTCTTCA+CGG + Chr5:12817208-12817227 None:intergenic 40.0%
CCAACTATACTAAGGTTTGG+TGG - Chr5:12815970-12815989 MsG0580025012.01.T01:CDS 40.0%
CCACCAAACCTTAGTATAGT+TGG + Chr5:12815973-12815992 None:intergenic 40.0%
CCAGCACATAAATTCCATGA+AGG - Chr5:12817358-12817377 MsG0580025012.01.T01:CDS 40.0%
CCTAAAATGATGCAGTTGGA+AGG - Chr5:12815123-12815142 MsG0580025012.01.T01:CDS 40.0%
CCTTCATGGAATTTATGTGC+TGG + Chr5:12817361-12817380 None:intergenic 40.0%
CTGAGCAAACTGTAGTTAGT+GGG - Chr5:12816469-12816488 MsG0580025012.01.T01:intron 40.0%
CTTATTCTTGTCACCTCTTC+CGG - Chr5:12817239-12817258 MsG0580025012.01.T01:intron 40.0%
GCAGTATCTGTTGAATCCAA+AGG + Chr5:12815229-12815248 None:intergenic 40.0%
GGGAATGATTAGTATGAGGA+GGG - Chr5:12814981-12815000 MsG0580025012.01.T01:CDS 40.0%
GGGTATTTGGTTATCTACCT+CGG - Chr5:12815089-12815108 MsG0580025012.01.T01:CDS 40.0%
GGTTCATATGGTGCAGATAT+TGG - Chr5:12815283-12815302 MsG0580025012.01.T01:CDS 40.0%
GTGAAGACTTCTCGAATGAT+GGG - Chr5:12817207-12817226 MsG0580025012.01.T01:intron 40.0%
TAGTGGAAGGAATATATGGG+AGG - Chr5:12814950-12814969 MsG0580025012.01.T01:CDS 40.0%
TCACGGATCAATACATGTGT+AGG + Chr5:12817191-12817210 None:intergenic 40.0%
TTCATGAAACATGGCATGTG+CGG - Chr5:12815658-12815677 MsG0580025012.01.T01:CDS 40.0%
TTGAAAAGTTGTTCCCGTAC+TGG + Chr5:12816543-12816562 None:intergenic 40.0%
TTGTACAACATTTGCTCCTG+TGG - Chr5:12816131-12816150 MsG0580025012.01.T01:intron 40.0%
TTTATCTCAGCTTCACCTTC+AGG - Chr5:12816256-12816275 MsG0580025012.01.T01:CDS 40.0%
! ATCGCTTCTAGGAATGAGAA+TGG + Chr5:12816670-12816689 None:intergenic 40.0%
! CAAAGGAAAAGGCTTTAGTG+TGG + Chr5:12817063-12817082 None:intergenic 40.0%
! CACTAAAGCCTTTTCCTTTG+CGG - Chr5:12817063-12817082 MsG0580025012.01.T01:CDS 40.0%
! CCTTCCAACTGCATCATTTT+AGG + Chr5:12815126-12815145 None:intergenic 40.0%
! TCGCTTCTAGGAATGAGAAT+GGG + Chr5:12816669-12816688 None:intergenic 40.0%
!! AACAATCAACTGGTGTCACA+TGG - Chr5:12816988-12817007 MsG0580025012.01.T01:intron 40.0%
!! ATTCTAGTTTAGCCAGGCTT+TGG - Chr5:12815067-12815086 MsG0580025012.01.T01:CDS 40.0%
!! TTCTAGTTTAGCCAGGCTTT+GGG - Chr5:12815068-12815087 MsG0580025012.01.T01:CDS 40.0%
!!! ATTTTTTTTTTGGGTGGGGG+TGG - Chr5:12815257-12815276 MsG0580025012.01.T01:CDS 40.0%
!!! TTTTTTTTTACCAGGGTGGG+GGG - Chr5:12815882-12815901 MsG0580025012.01.T01:intron 40.0%
!!! TTTTTTTTTTGGGTGGGGGT+GGG - Chr5:12815258-12815277 MsG0580025012.01.T01:CDS 40.0%
AATACATGTGTAGGTGGACC+AGG + Chr5:12817182-12817201 None:intergenic 45.0%
AATATATGGGAGGTAGCACG+AGG - Chr5:12814960-12814979 MsG0580025012.01.T01:CDS 45.0%
AATCAGGCTGTTGGAGGAAA+TGG - Chr5:12816444-12816463 MsG0580025012.01.T01:intron 45.0%
ACAAGGACGTAGAACATCCA+TGG + Chr5:12816496-12816515 None:intergenic 45.0%
ACCTTTCACTGCCAACCATA+TGG - Chr5:12815431-12815450 MsG0580025012.01.T01:intron 45.0%
AGATGAGCCACGACAACATT+AGG + Chr5:12815999-12816018 None:intergenic 45.0%
AGCTGGCAGTTAGTTAGTAG+TGG - Chr5:12814933-12814952 MsG0580025012.01.T01:CDS 45.0%
AGTTTCATGTACTCCTGGTG+TGG - Chr5:12815185-12815204 MsG0580025012.01.T01:CDS 45.0%
ATACATGTGTAGGTGGACCA+GGG + Chr5:12817181-12817200 None:intergenic 45.0%
ATATATGGGAGGTAGCACGA+GGG - Chr5:12814961-12814980 MsG0580025012.01.T01:CDS 45.0%
CCTTTCACTGCCAACCATAT+GGG - Chr5:12815432-12815451 MsG0580025012.01.T01:intron 45.0%
CGGAAGAGGTGACAAGAATA+AGG + Chr5:12817241-12817260 None:intergenic 45.0%
CGGATCAATACATGTGTAGG+TGG + Chr5:12817188-12817207 None:intergenic 45.0%
CGTGAAGACTTCTCGAATGA+TGG - Chr5:12817206-12817225 MsG0580025012.01.T01:intron 45.0%
CTACTAACTAACTGCCAGCT+AGG + Chr5:12814933-12814952 None:intergenic 45.0%
CTTTATAGAGGCTTCAACCG+AGG - Chr5:12816612-12816631 MsG0580025012.01.T01:intron 45.0%
GCAGATATTGGGCAAATGTG+TGG - Chr5:12815295-12815314 MsG0580025012.01.T01:CDS 45.0%
GCAGTTGGAAGGTTCAATTG+TGG - Chr5:12815134-12815153 MsG0580025012.01.T01:CDS 45.0%
GCTGAGCAAACTGTAGTTAG+TGG - Chr5:12816468-12816487 MsG0580025012.01.T01:intron 45.0%
GGATGTTCTACGTCCTTGTT+GGG - Chr5:12816497-12816516 MsG0580025012.01.T01:intron 45.0%
GGTGTGCCAAAGCAATAACT+TGG - Chr5:12815679-12815698 MsG0580025012.01.T01:CDS 45.0%
GTCAAGAAGATAACGTCCCA+TGG + Chr5:12816716-12816735 None:intergenic 45.0%
TAACCAAATACCCCAAAGCC+TGG + Chr5:12815082-12815101 None:intergenic 45.0%
TATGAACGTGGGAAGAAGAG+AGG - Chr5:12814885-12814904 MsG0580025012.01.T01:CDS 45.0%
TCGACCAGATGCCAAATGAA+GGG + Chr5:12816039-12816058 None:intergenic 45.0%
TGAGAGGCCCATTATTTGGA+GGG - Chr5:12814860-12814879 MsG0580025012.01.T01:CDS 45.0%
TGAGTGAGAGGCCCATTATT+TGG - Chr5:12814856-12814875 MsG0580025012.01.T01:CDS 45.0%
TGCACAGTTTCATGTACTCC+TGG - Chr5:12815180-12815199 MsG0580025012.01.T01:CDS 45.0%
TGCATGGTCATGATGCTGTT+TGG - Chr5:12816958-12816977 MsG0580025012.01.T01:intron 45.0%
TGGATGTTCTACGTCCTTGT+TGG - Chr5:12816496-12816515 MsG0580025012.01.T01:intron 45.0%
TGTAGCCAATATGCTACCTC+CGG + Chr5:12817150-12817169 None:intergenic 45.0%
TGTTGTCGTGGCTCATCTAA+AGG - Chr5:12816001-12816020 MsG0580025012.01.T01:intron 45.0%
TTATCTACCTCGGAGAAGCT+AGG - Chr5:12815099-12815118 MsG0580025012.01.T01:CDS 45.0%
TTCGACCAGATGCCAAATGA+AGG + Chr5:12816040-12816059 None:intergenic 45.0%
TTGGCTACAATTGAACTCCC+TGG - Chr5:12817161-12817180 MsG0580025012.01.T01:CDS 45.0%
! AACTGTAGTTAGTGGGTCCA+TGG - Chr5:12816476-12816495 MsG0580025012.01.T01:intron 45.0%
! ATTTGGAGGGTGTATGAACG+TGG - Chr5:12814873-12814892 MsG0580025012.01.T01:CDS 45.0%
! CTCTTCTTCAGTGTGCTGAT+CGG - Chr5:12817299-12817318 MsG0580025012.01.T01:CDS 45.0%
! GCCAACCATATGGGTTAAAC+TGG - Chr5:12815441-12815460 MsG0580025012.01.T01:intron 45.0%
! GGCAGTTAGTTAGTAGTGGA+AGG - Chr5:12814937-12814956 MsG0580025012.01.T01:CDS 45.0%
! TCTAGTTTAGCCAGGCTTTG+GGG - Chr5:12815069-12815088 MsG0580025012.01.T01:CDS 45.0%
! TTGGTTATGGTGGGAACGTA+TGG + Chr5:12815954-12815973 None:intergenic 45.0%
! TTTGGAGGGTGTATGAACGT+GGG - Chr5:12814874-12814893 MsG0580025012.01.T01:CDS 45.0%
!! TGTGGTTGGCTTCTGCATAT+CGG - Chr5:12815313-12815332 MsG0580025012.01.T01:CDS 45.0%
AAAGCCATACACTCCGGAAG+AGG + Chr5:12817255-12817274 None:intergenic 50.0%
AGAGAGGAGAGAAGGGACTA+AGG - Chr5:12814901-12814920 MsG0580025012.01.T01:CDS 50.0%
AGAGGAGAGAAGGGACTAAG+GGG - Chr5:12814903-12814922 MsG0580025012.01.T01:CDS 50.0%
ATCACCCGGAGGTAGCATAT+TGG - Chr5:12817142-12817161 MsG0580025012.01.T01:CDS 50.0%
CAAATCTACCTTCCCCAGCA+GGG - Chr5:12817012-12817031 MsG0580025012.01.T01:intron 50.0%
CAGATAACTGCGTACACTCC+TGG - Chr5:12816933-12816952 MsG0580025012.01.T01:intron 50.0%
CATGAGATGATCCTTGCAGC+TGG - Chr5:12817098-12817117 MsG0580025012.01.T01:CDS 50.0%
CATGTAGACCACCTTCCTGA+AGG + Chr5:12816274-12816293 None:intergenic 50.0%
CCCATATGGTTGGCAGTGAA+AGG + Chr5:12815435-12815454 None:intergenic 50.0%
CTGGACAAAGCCATACACTC+CGG + Chr5:12817261-12817280 None:intergenic 50.0%
CTTCTTGACAAATCGGGGAG+AGG - Chr5:12816727-12816746 MsG0580025012.01.T01:intron 50.0%
GAAGCCCTTCATTTGGCATC+TGG - Chr5:12816032-12816051 MsG0580025012.01.T01:intron 50.0%
GAGAGGAGAGAAGGGACTAA+GGG - Chr5:12814902-12814921 MsG0580025012.01.T01:CDS 50.0%
GAGGCTGTGGTAATATCACC+CGG - Chr5:12817128-12817147 MsG0580025012.01.T01:CDS 50.0%
GATGGTCACAAGCACAGGAA+GGG - Chr5:12816687-12816706 MsG0580025012.01.T01:intron 50.0%
GCATCATGACCATGCAAACC+AGG + Chr5:12816954-12816973 None:intergenic 50.0%
GGCTGTCTCATAGTCGTGAT+GGG - Chr5:12817320-12817339 MsG0580025012.01.T01:CDS 50.0%
GGGAAGAAGAGAGGAGAGAA+GGG - Chr5:12814894-12814913 MsG0580025012.01.T01:CDS 50.0%
GGGGATAGAAGCCCTTCATT+TGG - Chr5:12816025-12816044 MsG0580025012.01.T01:intron 50.0%
GTAGCCAATATGCTACCTCC+GGG + Chr5:12817149-12817168 None:intergenic 50.0%
GTCGTGGCTCATCTAAAGGA+GGG - Chr5:12816005-12816024 MsG0580025012.01.T01:intron 50.0%
GTGAGAGGCCCATTATTTGG+AGG - Chr5:12814859-12814878 MsG0580025012.01.T01:CDS 50.0%
GTGGGTTCCTAATGTTGTCG+TGG - Chr5:12815989-12816008 MsG0580025012.01.T01:intron 50.0%
TCAAATCTACCTTCCCCAGC+AGG - Chr5:12817011-12817030 MsG0580025012.01.T01:intron 50.0%
TCGTGCAACCGCAAAGGAAA+AGG + Chr5:12817074-12817093 None:intergenic 50.0%
TCGTGGCTCATCTAAAGGAG+GGG - Chr5:12816006-12816025 MsG0580025012.01.T01:intron 50.0%
TCTCAGCTTCACCTTCAGGA+AGG - Chr5:12816260-12816279 MsG0580025012.01.T01:CDS 50.0%
TGATTGTCGTGCAACCGCAA+AGG + Chr5:12817080-12817099 None:intergenic 50.0%
TGCTTGTGACCATCGCTTCT+AGG + Chr5:12816681-12816700 None:intergenic 50.0%
TGGCAGTGGCAACAATCAAC+TGG - Chr5:12816978-12816997 MsG0580025012.01.T01:intron 50.0%
TGGGAAGAAGAGAGGAGAGA+AGG - Chr5:12814893-12814912 MsG0580025012.01.T01:CDS 50.0%
TGTCGTGGCTCATCTAAAGG+AGG - Chr5:12816004-12816023 MsG0580025012.01.T01:intron 50.0%
! GTCATGATGCTGTTTGGCAG+TGG - Chr5:12816964-12816983 MsG0580025012.01.T01:intron 50.0%
! GTTATGGTGGGAACGTATGG+TGG + Chr5:12815951-12815970 None:intergenic 50.0%
! TTTAGGACCTAGCTTCTCCG+AGG + Chr5:12815109-12815128 None:intergenic 50.0%
!! ACACTGAAGAAGAGAGCACC+AGG + Chr5:12817293-12817312 None:intergenic 50.0%
!! AGAAGAGAGCACCAGGTTGT+CGG + Chr5:12817286-12817305 None:intergenic 50.0%
!! AGGGATGATGGAAGGTGGTT+TGG - Chr5:12817031-12817050 MsG0580025012.01.T01:intron 50.0%
!! TAGCCAGGCTTTGGGGTATT+TGG - Chr5:12815076-12815095 MsG0580025012.01.T01:CDS 50.0%
!! TGGAGTTCTGGATCATGTGC+AGG - Chr5:12816310-12816329 MsG0580025012.01.T01:intron 50.0%
AACGTCTGGCGTACCAGTAC+GGG - Chr5:12816527-12816546 MsG0580025012.01.T01:intron 55.0%
AAGCACAGGAAGGGAAGCCA+TGG - Chr5:12816696-12816715 MsG0580025012.01.T01:intron 55.0%
ACCTTCCATCATCCCTGCTG+GGG + Chr5:12817027-12817046 None:intergenic 55.0%
AGCACAGGAAGGGAAGCCAT+GGG - Chr5:12816697-12816716 MsG0580025012.01.T01:intron 55.0%
AGCTGGAGAACAAGAGGCTG+TGG - Chr5:12817115-12817134 MsG0580025012.01.T01:CDS 55.0%
CAACGTCTGGCGTACCAGTA+CGG - Chr5:12816526-12816545 MsG0580025012.01.T01:intron 55.0%
CACCTTCCATCATCCCTGCT+GGG + Chr5:12817028-12817047 None:intergenic 55.0%
CAGCTTCACCTTCAGGAAGG+TGG - Chr5:12816263-12816282 MsG0580025012.01.T01:CDS 55.0%
CCTCTTGTTCTCCAGCTGCA+AGG + Chr5:12817112-12817131 None:intergenic 55.0%
CCTTGCAGCTGGAGAACAAG+AGG - Chr5:12817109-12817128 MsG0580025012.01.T01:CDS 55.0%
CGATGGTCACAAGCACAGGA+AGG - Chr5:12816686-12816705 MsG0580025012.01.T01:intron 55.0%
CGGCTGTCTCATAGTCGTGA+TGG - Chr5:12817319-12817338 MsG0580025012.01.T01:CDS 55.0%
CTCGTCCATCATCTGGTCCT+AGG - Chr5:12817387-12817406 MsG0580025012.01.T01:CDS 55.0%
GAAGCGATGGTCACAAGCAC+AGG - Chr5:12816682-12816701 MsG0580025012.01.T01:intron 55.0%
GACGTTGCAACAGCCCAACA+AGG + Chr5:12816513-12816532 None:intergenic 55.0%
GAGGAGAGAAGGGACTAAGG+GGG - Chr5:12814904-12814923 MsG0580025012.01.T01:CDS 55.0%
GCTGTGGTAATATCACCCGG+AGG - Chr5:12817131-12817150 MsG0580025012.01.T01:CDS 55.0%
GTCACCTCTTCCGGAGTGTA+TGG - Chr5:12817248-12817267 MsG0580025012.01.T01:intron 55.0%
TCCTGGTGTGGTTGAAGCGT+TGG - Chr5:12815197-12815216 MsG0580025012.01.T01:CDS 55.0%
TGTTGGGCTGTTGCAACGTC+TGG - Chr5:12816513-12816532 MsG0580025012.01.T01:intron 55.0%
TTTGTCCAGACCCGACAACC+TGG - Chr5:12817272-12817291 MsG0580025012.01.T01:intron 55.0%
! CCTGGTGTGGTTGAAGCGTT+GGG - Chr5:12815198-12815217 MsG0580025012.01.T01:CDS 55.0%
! GCGTACACTCCTGGTTTGCA+TGG - Chr5:12816942-12816961 MsG0580025012.01.T01:intron 55.0%
!! CTAGGACCAGATGATGGACG+AGG + Chr5:12817389-12817408 None:intergenic 55.0%
!! CTGGTGTGGTTGAAGCGTTG+GGG - Chr5:12815199-12815218 MsG0580025012.01.T01:CDS 55.0%
!! GAAGAGAGCACCAGGTTGTC+GGG + Chr5:12817285-12817304 None:intergenic 55.0%
!! TGGTGTGGTTGAAGCGTTGG+GGG - Chr5:12815200-12815219 MsG0580025012.01.T01:CDS 55.0%
!!! TTTTTTGGGTGGGGGTGGGT+GGG - Chr5:12815262-12815281 MsG0580025012.01.T01:CDS 55.0%
!!! TTTTTTTGGGTGGGGGTGGG+TGG - Chr5:12815261-12815280 MsG0580025012.01.T01:CDS 55.0%
ACCTTCCCCAGCAGGGATGA+TGG - Chr5:12817019-12817038 MsG0580025012.01.T01:intron 60.0%
ATAGTGCAAACCCCCCACCC+TGG + Chr5:12815895-12815914 None:intergenic 60.0%
CCACCTTCCATCATCCCTGC+TGG + Chr5:12817029-12817048 None:intergenic 60.0%
CCCAACGCTTCAACCACACC+AGG + Chr5:12815201-12815220 None:intergenic 60.0%
GGGAAGCCTCGTCCATCATC+TGG - Chr5:12817380-12817399 MsG0580025012.01.T01:CDS 60.0%
TCCATCATCCCTGCTGGGGA+AGG + Chr5:12817023-12817042 None:intergenic 60.0%
TGGACGAGGCTTCCCCTTCA+TGG + Chr5:12817375-12817394 None:intergenic 60.0%
! TGGGGGTGGGTGGGTTCATA+TGG - Chr5:12815271-12815290 MsG0580025012.01.T01:CDS 60.0%
!! CCAGCAGGGATGATGGAAGG+TGG - Chr5:12817026-12817045 MsG0580025012.01.T01:intron 60.0%
!! GAAGCGTTGGGGGTTGCCTT+TGG - Chr5:12815210-12815229 MsG0580025012.01.T01:CDS 60.0%
!! TCCCCAGCAGGGATGATGGA+AGG - Chr5:12817023-12817042 MsG0580025012.01.T01:intron 60.0%
GACTAAGGGGGCTGCCTAGC+TGG - Chr5:12814916-12814935 MsG0580025012.01.T01:CDS 65.0%
GAGCACCAGGTTGTCGGGTC+TGG + Chr5:12817280-12817299 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr5 gene 12814855 12817412 12814855 ID=MsG0580025012.01;Name=MsG0580025012.01
Chr5 mRNA 12814855 12817412 12814855 ID=MsG0580025012.01.T01;Parent=MsG0580025012.01;Name=MsG0580025012.01.T01;_AED=0.50;_eAED=0.63;_QI=0|0.4|0.33|1|0.6|0.66|6|0|423
Chr5 exon 12817276 12817412 12817276 ID=MsG0580025012.01.T01:exon:20012;Parent=MsG0580025012.01.T01
Chr5 exon 12817046 12817193 12817046 ID=MsG0580025012.01.T01:exon:20011;Parent=MsG0580025012.01.T01
Chr5 exon 12816197 12816322 12816197 ID=MsG0580025012.01.T01:exon:20010;Parent=MsG0580025012.01.T01
Chr5 exon 12815936 12816001 12815936 ID=MsG0580025012.01.T01:exon:20009;Parent=MsG0580025012.01.T01
Chr5 exon 12815546 12815817 12815546 ID=MsG0580025012.01.T01:exon:20008;Parent=MsG0580025012.01.T01
Chr5 exon 12814855 12815377 12814855 ID=MsG0580025012.01.T01:exon:20007;Parent=MsG0580025012.01.T01
Chr5 CDS 12817276 12817412 12817276 ID=MsG0580025012.01.T01:cds;Parent=MsG0580025012.01.T01
Chr5 CDS 12817046 12817193 12817046 ID=MsG0580025012.01.T01:cds;Parent=MsG0580025012.01.T01
Chr5 CDS 12816197 12816322 12816197 ID=MsG0580025012.01.T01:cds;Parent=MsG0580025012.01.T01
Chr5 CDS 12815936 12816001 12815936 ID=MsG0580025012.01.T01:cds;Parent=MsG0580025012.01.T01
Chr5 CDS 12815546 12815817 12815546 ID=MsG0580025012.01.T01:cds;Parent=MsG0580025012.01.T01
Chr5 CDS 12814855 12815377 12814855 ID=MsG0580025012.01.T01:cds;Parent=MsG0580025012.01.T01
Gene Sequence

>MsG0580025012.01.T01

ATGAGTGAGAGGCCCATTATTTGGAGGGTGTATGAACGTGGGAAGAAGAGAGGAGAGAAGGGACTAAGGGGGCTGCCTAGCTGGCAGTTAGTTAGTAGTGGAAGGAATATATGGGAGGTAGCACGAGGGAATGATTATTTAGCCAGGCTTTGGGGTATTTGGTTATCTACCTCGGAGAAGCTAGGTCCTAAAATGATGCAGTTGGAAGGTTCAATTGTGGGAGTCTCTATGTTGGTGATGATTTGCACAGTTTCATGTACTCCTGGTGTGGTTGAAGCGTTGGGGCATCCACCATACGTTCCCACCATAACCAACTATACTAAGGTTTGGTGGGTTCCTAATGTTGTCGTGGCTCATCTAAAGGAGGGGATAGAAGCCCTTCATTTGGCATCTGGTCGAACACTATGTAAGCTTCACCTTCAGGAAGGTGGTCTACATGCTGATATTAATGGTGATGGAGTTCTGGATCATGTGCAGGCTGTTGGAGGAAATGGTGCTGAGCAAACTGTAGTTAGTGGGTCCATGGATGTTCTACGTCCTTGTTGGGCTGTTGCAACGTCTGGCGTACCAGTACGGGAACAACTTTTCAATGTATCTATTTGTCATTATACCCATTTTAACTTATTCCAACATGGAGAACTTTATAGAGGCTTCAACCGAGGTTCAGATATGTCTTCTTTGGAGGTAGCAACACCCATTCTCATTCCTAGAAGCGATGGTCACAAGCACAGGAAGGGAAGCCATGGGACATATTCTGTACCTTTATACCGACTTTATAAAAATTGTTCATCGCAGATAACTGCGTACACTCCTGGTTTGCATGGTCATGATGCTGTTTGGCAGTGGCAACAATCAACTGGTGTCACATGGTCAAATCTACCTTCCCCAGCAGGGATGATGGAAGGTGGTTTGGTGATTCCCACACTAAAGCCTTTTCCTTTGCGGTTGCACGACAATCATGAGATGATCCTTGCAGCTGGAGAACAAGAGGCTGTGGTAATATCACCCGGAGGTAGCATATTGGCTACAATTGAACTCCCTGGTCCACCTACACATGTATTGATCCGTGAAGACTTCTCGAATGATGGGCTCACTGACCTTATTCTTGTCACCTCTTCCGGAGTGTATGGCTTTGTCCAGACCCGACAACCTGGTGCTCTCTTCTTCAGTGTGCTGATCGGCTGTCTCATAGTCGTGATGGGAATTATATTTGTTACCCAGCACATAAATTCCATGAAGGGGAAGCCTCGTCCATCATCTGGTCCTAGGTGA
Protein sequence

>MsG0580025012.01.T01

MSERPIIWRVYERGKKRGEKGLRGLPSWQLVSSGRNIWEVARGNDYLARLWGIWLSTSEKLGPKMMQLEGSIVGVSMLVMICTVSCTPGVVEALGHPPYVPTITNYTKVWWVPNVVVAHLKEGIEALHLASGRTLCKLHLQEGGLHADINGDGVLDHVQAVGGNGAEQTVVSGSMDVLRPCWAVATSGVPVREQLFNVSICHYTHFNLFQHGELYRGFNRGSDMSSLEVATPILIPRSDGHKHRKGSHGTYSVPLYRLYKNCSSQITAYTPGLHGHDAVWQWQQSTGVTWSNLPSPAGMMEGGLVIPTLKPFPLRLHDNHEMILAAGEQEAVVISPGGSILATIELPGPPTHVLIREDFSNDGLTDLILVTSSGVYGFVQTRQPGALFFSVLIGCLIVVMGIIFVTQHINSMKGKPRPSSGPR*