Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580025098.01.T01 | RHN54326.1 | 88.488 | 582 | 17 | 3 | 1 | 552 | 1 | 562 | 0 | 981 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580025098.01.T01 | O04472 | 60.734 | 545 | 172 | 5 | 31 | 551 | 14 | 540 | 0 | 696 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580025098.01.T01 | A0A396HLV6 | 88.488 | 582 | 17 | 3 | 1 | 552 | 1 | 562 | 0.0 | 981 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|---|---|
MsG0580025098.01 | MsG0880046357.01 | PPI |
MsG0580025098.01 | MsG0880046357.01 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580025098.01.T01 | MTR_5g022110 | 89.065 | 567 | 27 | 3 | 1 | 552 | 1 | 547 | 0.0 | 964 |
MsG0580025098.01.T01 | MTR_3g103230 | 71.324 | 544 | 126 | 2 | 24 | 552 | 26 | 554 | 0.0 | 801 |
MsG0580025098.01.T01 | MTR_8g063220 | 55.191 | 549 | 207 | 5 | 26 | 552 | 2 | 533 | 0.0 | 617 |
MsG0580025098.01.T01 | MTR_3g078270 | 54.693 | 554 | 209 | 4 | 17 | 552 | 3 | 532 | 0.0 | 610 |
MsG0580025098.01.T01 | MTR_4g106750 | 53.663 | 546 | 219 | 4 | 26 | 552 | 2 | 532 | 0.0 | 594 |
MsG0580025098.01.T01 | MTR_5g035180 | 53.471 | 533 | 214 | 4 | 39 | 552 | 21 | 538 | 0.0 | 586 |
MsG0580025098.01.T01 | MTR_1g106085 | 53.506 | 542 | 218 | 7 | 26 | 551 | 3 | 526 | 0.0 | 553 |
MsG0580025098.01.T01 | MTR_4g106750 | 55.187 | 482 | 198 | 2 | 89 | 552 | 2 | 483 | 0.0 | 542 |
MsG0580025098.01.T01 | MTR_2g016460 | 49.722 | 539 | 231 | 6 | 31 | 550 | 5 | 522 | 0.0 | 529 |
MsG0580025098.01.T01 | MTR_8g086520 | 49.257 | 538 | 235 | 6 | 31 | 550 | 5 | 522 | 0.0 | 526 |
MsG0580025098.01.T01 | MTR_3g080390 | 48.491 | 530 | 237 | 4 | 40 | 550 | 6 | 518 | 4.27e-178 | 513 |
MsG0580025098.01.T01 | MTR_1g021120 | 47.925 | 530 | 233 | 7 | 44 | 551 | 38 | 546 | 3.01e-165 | 481 |
MsG0580025098.01.T01 | MTR_8g086520 | 50.773 | 453 | 190 | 3 | 31 | 468 | 5 | 439 | 1.68e-159 | 463 |
MsG0580025098.01.T01 | MTR_8g086520 | 50.242 | 414 | 173 | 3 | 31 | 429 | 5 | 400 | 4.53e-142 | 416 |
MsG0580025098.01.T01 | MTR_4g106750 | 54.595 | 370 | 150 | 2 | 201 | 552 | 11 | 380 | 3.12e-138 | 405 |
MsG0580025098.01.T01 | MTR_8g086520 | 50.372 | 403 | 180 | 4 | 166 | 550 | 6 | 406 | 5.57e-137 | 403 |
MsG0580025098.01.T01 | MTR_8g068550 | 32.819 | 518 | 292 | 8 | 82 | 549 | 244 | 755 | 6.29e-82 | 271 |
MsG0580025098.01.T01 | MTR_5g032020 | 33.395 | 539 | 291 | 9 | 64 | 545 | 166 | 693 | 1.38e-81 | 269 |
MsG0580025098.01.T01 | MTR_2g084895 | 32.258 | 527 | 291 | 8 | 79 | 549 | 162 | 678 | 1.82e-80 | 266 |
MsG0580025098.01.T01 | MTR_2g103510 | 31.102 | 508 | 288 | 9 | 79 | 549 | 109 | 591 | 5.97e-77 | 254 |
MsG0580025098.01.T01 | MTR_4g055290 | 31.489 | 524 | 294 | 8 | 79 | 549 | 169 | 680 | 1.56e-75 | 253 |
MsG0580025098.01.T01 | MTR_8g086535 | 56.034 | 116 | 50 | 1 | 315 | 429 | 1 | 116 | 6.80e-34 | 125 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580025098.01.T01 | AT1G65550 | 60.734 | 545 | 172 | 5 | 31 | 551 | 14 | 540 | 0.0 | 696 |
MsG0580025098.01.T01 | AT5G62890 | 54.579 | 546 | 214 | 4 | 26 | 552 | 2 | 532 | 0.0 | 601 |
MsG0580025098.01.T01 | AT5G62890 | 54.579 | 546 | 214 | 4 | 26 | 552 | 2 | 532 | 0.0 | 601 |
MsG0580025098.01.T01 | AT5G62890 | 54.579 | 546 | 214 | 4 | 26 | 552 | 2 | 532 | 0.0 | 601 |
MsG0580025098.01.T01 | AT1G60030 | 54.887 | 532 | 207 | 3 | 39 | 552 | 22 | 538 | 0.0 | 601 |
MsG0580025098.01.T01 | AT1G10540 | 52.527 | 554 | 225 | 5 | 19 | 551 | 2 | 538 | 0.0 | 577 |
MsG0580025098.01.T01 | AT5G49990 | 53.271 | 535 | 217 | 3 | 36 | 552 | 9 | 528 | 0.0 | 554 |
MsG0580025098.01.T01 | AT5G49990 | 53.271 | 535 | 217 | 3 | 36 | 552 | 9 | 528 | 0.0 | 554 |
MsG0580025098.01.T01 | AT5G49990 | 53.271 | 535 | 217 | 3 | 36 | 552 | 9 | 528 | 0.0 | 554 |
MsG0580025098.01.T01 | AT5G49990 | 53.271 | 535 | 217 | 3 | 36 | 552 | 9 | 528 | 0.0 | 554 |
MsG0580025098.01.T01 | AT1G49960 | 51.197 | 543 | 226 | 6 | 29 | 551 | 2 | 525 | 0.0 | 548 |
MsG0580025098.01.T01 | AT5G62890 | 57.019 | 463 | 168 | 3 | 26 | 472 | 2 | 449 | 0.0 | 532 |
MsG0580025098.01.T01 | AT2G34190 | 49.165 | 539 | 236 | 6 | 30 | 550 | 4 | 522 | 0.0 | 526 |
MsG0580025098.01.T01 | AT2G05760 | 48.302 | 530 | 238 | 4 | 40 | 550 | 6 | 518 | 1.29e-176 | 509 |
MsG0580025098.01.T01 | AT5G25420 | 55.000 | 440 | 128 | 5 | 31 | 470 | 26 | 395 | 1.04e-161 | 467 |
MsG0580025098.01.T01 | AT2G26510 | 46.139 | 531 | 246 | 5 | 41 | 550 | 36 | 547 | 1.79e-155 | 456 |
MsG0580025098.01.T01 | AT1G10540 | 52.723 | 404 | 156 | 4 | 19 | 404 | 2 | 388 | 2.84e-142 | 416 |
MsG0580025098.01.T01 | AT2G26510 | 45.646 | 379 | 176 | 2 | 41 | 404 | 36 | 399 | 6.64e-106 | 324 |
MsG0580025098.01.T01 | AT2G26510 | 44.809 | 366 | 172 | 2 | 41 | 391 | 36 | 386 | 9.12e-99 | 306 |
MsG0580025098.01.T01 | AT4G38050 | 32.443 | 524 | 288 | 7 | 81 | 549 | 192 | 704 | 1.47e-73 | 248 |
MsG0580025098.01.T01 | AT2G27810 | 30.754 | 517 | 309 | 7 | 81 | 549 | 186 | 701 | 1.77e-69 | 237 |
MsG0580025098.01.T01 | AT2G27810 | 34.679 | 421 | 241 | 5 | 81 | 468 | 186 | 605 | 4.75e-68 | 234 |
MsG0580025098.01.T01 | AT2G27810 | 34.074 | 405 | 233 | 5 | 81 | 452 | 186 | 589 | 3.14e-62 | 215 |
MsG0580025098.01.T01 | AT2G27810 | 34.637 | 358 | 200 | 5 | 81 | 405 | 186 | 542 | 1.81e-52 | 187 |
Find 119 sgRNAs with CRISPR-Local
Find 222 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACCATTGAAACAGGAAAATT+TGG | 0.125795 | 5:+13818404 | MsG0580025098.01.T01:intron |
TGCATTGGTTGCATTAATTT+TGG | 0.216559 | 5:+13819412 | MsG0580025098.01.T01:CDS |
CTAGGCTTCTCATTCTTCTT+AGG | 0.228918 | 5:+13819177 | MsG0580025098.01.T01:CDS |
CTTGCGAAATGCGTTGAAAT+TGG | 0.244279 | 5:+13817023 | MsG0580025098.01.T01:CDS |
ACTTCCTGCTTTAATTGTTA+TGG | 0.257766 | 5:+13817046 | MsG0580025098.01.T01:CDS |
TGAGAAGCCTAGCACAAATT+TGG | 0.262002 | 5:-13819166 | None:intergenic |
ACCACCTTCATTGGCAGCTT+TGG | 0.293558 | 5:-13815817 | None:intergenic |
AAGTCCTACTTTCAATGTTT+TGG | 0.295517 | 5:+13817586 | MsG0580025098.01.T01:CDS |
ACCTATAATTTCTATTGTTC+AGG | 0.295647 | 5:+13816543 | MsG0580025098.01.T01:CDS |
TCAAGTTTCCAAATGGCTAT+TGG | 0.296920 | 5:+13816724 | MsG0580025098.01.T01:CDS |
GGCATGTTTGGTTGTGTAAC+TGG | 0.299241 | 5:+13817961 | MsG0580025098.01.T01:CDS |
AACTATAATTGTTCCTCAAA+TGG | 0.310349 | 5:+13816297 | MsG0580025098.01.T01:CDS |
TGCAGGTCAAGCAGTGATAT+TGG | 0.311608 | 5:+13816228 | MsG0580025098.01.T01:CDS |
ATAGTTTCATTTACCTCATA+AGG | 0.311803 | 5:-13816592 | None:intergenic |
GCATTATATTGTATATTATT+CGG | 0.323236 | 5:+13818464 | MsG0580025098.01.T01:CDS |
TCCTATGCTGCTGCAAGATA+TGG | 0.340951 | 5:+13817756 | MsG0580025098.01.T01:CDS |
AAAATGACAGTGGTTTAAAA+TGG | 0.346990 | 5:+13819468 | MsG0580025098.01.T01:CDS |
GCCTGAACAATAGAAATTAT+AGG | 0.356271 | 5:-13816544 | None:intergenic |
TCTTTCACTGGCTGTGGTGC+TGG | 0.357369 | 5:-13815897 | None:intergenic |
GGAGTAGGTGCTTTGTTTAG+TGG | 0.360576 | 5:+13817940 | MsG0580025098.01.T01:CDS |
TTAATGCAATATTGAATTCC+AGG | 0.362670 | 5:-13815927 | None:intergenic |
TATGTAGCTTCTGCTGGTCT+TGG | 0.364528 | 5:+13819108 | MsG0580025098.01.T01:intron |
CGATTGCCAATTGTAGTTGT+TGG | 0.376597 | 5:+13816502 | MsG0580025098.01.T01:CDS |
GCCTCCACCACCACCTTCAT+TGG | 0.391683 | 5:-13815826 | None:intergenic |
TGACAAAACATGGCTCAAAA+TGG | 0.404370 | 5:+13815780 | None:intergenic |
TATGAACCAACAACTACAAT+TGG | 0.405084 | 5:-13816508 | None:intergenic |
CCTTGTATAATGGAGATGTT+AGG | 0.407646 | 5:+13819504 | MsG0580025098.01.T01:CDS |
CAATATAATGCTGCTATGAT+TGG | 0.408090 | 5:-13818452 | None:intergenic |
CAGCATTACCTTCTAACTCT+TGG | 0.411328 | 5:+13816256 | MsG0580025098.01.T01:CDS |
TATCAGCCGCGGAGCTGGTT+GGG | 0.413972 | 5:+13817806 | MsG0580025098.01.T01:CDS |
AATATATAGCTTACCCATCT+AGG | 0.414115 | 5:-13819258 | None:intergenic |
GCTTTGTTTAGTGGCATGTT+TGG | 0.416996 | 5:+13817949 | MsG0580025098.01.T01:CDS |
AGGTGTTATGATCTCTTAAA+GGG | 0.417215 | 5:-13819576 | None:intergenic |
ATGAACAAGAAAGTCCTAGA+TGG | 0.420567 | 5:+13819244 | MsG0580025098.01.T01:CDS |
GAGAAGTTCACCTTGTATAA+TGG | 0.421075 | 5:+13819494 | MsG0580025098.01.T01:CDS |
TCTATTATCAGCCGCGGAGC+TGG | 0.422496 | 5:+13817801 | MsG0580025098.01.T01:CDS |
ATTTGAGGAACAATTATAGT+TGG | 0.426537 | 5:-13816295 | None:intergenic |
GAAGGTGGTGGTGGAGGCGG+CGG | 0.426596 | 5:+13815831 | MsG0580025098.01.T01:CDS |
ACATTTCTTCAATCTTTGTT+CGG | 0.429936 | 5:+13816475 | MsG0580025098.01.T01:CDS |
GCAGGTCAAGCAGTGATATT+GGG | 0.430172 | 5:+13816229 | MsG0580025098.01.T01:CDS |
CAGACACTTCTGTTTGTGTC+TGG | 0.433279 | 5:+13816445 | MsG0580025098.01.T01:CDS |
AACTGTTGAGGTTACAGAAC+TGG | 0.434392 | 5:-13819137 | None:intergenic |
CAATGTAGGCTGAGAAGACT+AGG | 0.435755 | 5:+13816416 | MsG0580025098.01.T01:intron |
TTACTAGCATTAACAAAAGT+AGG | 0.438242 | 5:+13818131 | MsG0580025098.01.T01:CDS |
AGCGCGATCAGTTCGGCAAC+TGG | 0.440761 | 5:-13817369 | None:intergenic |
AATGAAGGTGGTGGTGGAGG+CGG | 0.442126 | 5:+13815828 | MsG0580025098.01.T01:CDS |
CTTACCATGGAGCGGTGGTT+AGG | 0.443759 | 5:-13817397 | None:intergenic |
ACATCTCCTCCACCCATTTG+AGG | 0.445664 | 5:-13816310 | None:intergenic |
CCAGGTAATTGCTCTTTCAC+TGG | 0.449256 | 5:-13815909 | None:intergenic |
ACTATAATTGTTCCTCAAAT+GGG | 0.450386 | 5:+13816298 | MsG0580025098.01.T01:CDS |
AGTAACTAGTATGTTGCAAA+AGG | 0.451022 | 5:+13817106 | MsG0580025098.01.T01:CDS |
TTATCAGCCGCGGAGCTGGT+TGG | 0.454021 | 5:+13817805 | MsG0580025098.01.T01:CDS |
CTGTAATGCCAAGAGTTAGA+AGG | 0.457456 | 5:-13816264 | None:intergenic |
GCTCCGCGGCTGATAATAGA+AGG | 0.458220 | 5:-13817798 | None:intergenic |
GCCAATGAAGGTGGTGGTGG+AGG | 0.466316 | 5:+13815825 | MsG0580025098.01.T01:CDS |
GTTCCATATGTAACTTTCGC+TGG | 0.467362 | 5:+13816882 | MsG0580025098.01.T01:CDS |
AGAGTAATTCAAATTTCAGC+TGG | 0.468569 | 5:+13818161 | MsG0580025098.01.T01:CDS |
TGGAACTATGTAGCTTCTGC+TGG | 0.469454 | 5:+13819102 | MsG0580025098.01.T01:intron |
CATAAGTTCAAGTTTCCAAA+TGG | 0.478916 | 5:+13816717 | MsG0580025098.01.T01:CDS |
TTATGATCTCTTAAAGGGCT+GGG | 0.481196 | 5:-13819571 | None:intergenic |
ACATATAACTGTTGCTGCAT+TGG | 0.483909 | 5:+13819397 | MsG0580025098.01.T01:CDS |
GTTATGATCTCTTAAAGGGC+TGG | 0.486418 | 5:-13819572 | None:intergenic |
TATGTAACTTTCGCTGGACT+CGG | 0.490704 | 5:+13816888 | MsG0580025098.01.T01:CDS |
ATGACAGTGGTTTAAAATGG+TGG | 0.494146 | 5:+13819471 | MsG0580025098.01.T01:CDS |
CCAGTGAAAGAGCAATTACC+TGG | 0.496122 | 5:+13815909 | MsG0580025098.01.T01:CDS |
ACATATGGAACTACAGATAG+TGG | 0.498392 | 5:-13816870 | None:intergenic |
AATTGCTCTTTCACTGGCTG+TGG | 0.501886 | 5:-13815903 | None:intergenic |
GGATTCCAGCGCGATCAGTT+CGG | 0.507110 | 5:-13817376 | None:intergenic |
AGTCCAGCGAAAGTTACATA+TGG | 0.513298 | 5:-13816885 | None:intergenic |
AATGCTGCTATGATTGGTAA+AGG | 0.516664 | 5:-13818446 | None:intergenic |
CTGATAATAGAAGGCGGCAC+CGG | 0.517220 | 5:-13817789 | None:intergenic |
ATGACAATGAGAGGGATTCA+AGG | 0.519356 | 5:+13816685 | MsG0580025098.01.T01:CDS |
GTGTACTAACGCCATGGAGG+TGG | 0.522538 | 5:-13815954 | None:intergenic |
TAGGACTTCCCCATTGGAAA+GGG | 0.527990 | 5:-13817571 | None:intergenic |
TCAATCTTTGATCATAATGC+AGG | 0.531783 | 5:+13816211 | MsG0580025098.01.T01:CDS |
CTTCCCCATTGGAAAGGGTA+AGG | 0.533419 | 5:-13817566 | None:intergenic |
TGAAAGTAGGACTTCCCCAT+TGG | 0.535521 | 5:-13817577 | None:intergenic |
TGAATATACAGATCCTTATG+AGG | 0.535943 | 5:+13816579 | MsG0580025098.01.T01:CDS |
GCTGCCAATGAAGGTGGTGG+TGG | 0.538131 | 5:+13815822 | MsG0580025098.01.T01:CDS |
CCTAACATCTCCATTATACA+AGG | 0.547749 | 5:-13819504 | None:intergenic |
TGACAGTGGTTTAAAATGGT+GGG | 0.549048 | 5:+13819472 | MsG0580025098.01.T01:CDS |
GCTTCCAAAACATTGAAAGT+AGG | 0.550456 | 5:-13817590 | None:intergenic |
TTCAGAACCAAATTTGTGCT+AGG | 0.556517 | 5:+13819159 | MsG0580025098.01.T01:CDS |
ATTTGGTTCTGAAACTGTTG+AGG | 0.556795 | 5:-13819149 | None:intergenic |
TGAACAAGAAAGTCCTAGAT+GGG | 0.558213 | 5:+13819245 | MsG0580025098.01.T01:CDS |
AAAAGCTCATTGAGTTTGCA+AGG | 0.560179 | 5:-13819548 | None:intergenic |
TCCATATCTTGCAGCAGCAT+AGG | 0.561582 | 5:-13817757 | None:intergenic |
GACACCAAAGCTGCCAATGA+AGG | 0.570835 | 5:+13815813 | MsG0580025098.01.T01:CDS |
GGACTCGGTCTCTATCAACT+TGG | 0.572049 | 5:+13816903 | MsG0580025098.01.T01:CDS |
AAAACCATAACAATTAAAGC+AGG | 0.572903 | 5:-13817050 | None:intergenic |
TGACTTGTTGTTATATGCAG+TGG | 0.579646 | 5:-13817333 | None:intergenic |
GAATCCTAACCACCGCTCCA+TGG | 0.579654 | 5:+13817393 | MsG0580025098.01.T01:CDS |
CTATCAACTTGGTTTCCCAA+TGG | 0.581145 | 5:+13816914 | MsG0580025098.01.T01:CDS |
TTGTGAGAAATATTGTGGTA+TGG | 0.582535 | 5:-13819205 | None:intergenic |
GTAGGACTTCCCCATTGGAA+AGG | 0.582640 | 5:-13817572 | None:intergenic |
GAACTACAGATAGTGGACTA+AGG | 0.587103 | 5:-13816863 | None:intergenic |
ATTGTTCCTCAAATGGGTGG+AGG | 0.596097 | 5:+13816304 | MsG0580025098.01.T01:CDS |
GCATTAACAGTCCACCTCCA+TGG | 0.596854 | 5:+13815943 | MsG0580025098.01.T01:CDS |
AACATGGCTCAAAATGGAGG+TGG | 0.597871 | 5:+13815786 | None:intergenic |
AGGTTTACTATGACAATGAG+AGG | 0.600380 | 5:+13816676 | MsG0580025098.01.T01:CDS |
AGTTGCCGAACTGATCGCGC+TGG | 0.602623 | 5:+13817371 | MsG0580025098.01.T01:CDS |
GGTTTACTATGACAATGAGA+GGG | 0.606294 | 5:+13816677 | MsG0580025098.01.T01:CDS |
AAATATTGTGAGAAATATTG+TGG | 0.606956 | 5:-13819210 | None:intergenic |
ATAATTGTTCCTCAAATGGG+TGG | 0.610258 | 5:+13816301 | MsG0580025098.01.T01:CDS |
CAGCCGCGGAGCTGGTTGGG+TGG | 0.617485 | 5:+13817809 | MsG0580025098.01.T01:CDS |
CCGCCTTCTATTATCAGCCG+CGG | 0.618383 | 5:+13817795 | MsG0580025098.01.T01:CDS |
CAAAACATGGCTCAAAATGG+AGG | 0.619091 | 5:+13815783 | None:intergenic |
AGATAGGTGTACTAACGCCA+TGG | 0.623946 | 5:-13815960 | None:intergenic |
AATAGAAGGCGGCACCGGCG+TGG | 0.625499 | 5:-13817784 | None:intergenic |
AATGTAGGCTGAGAAGACTA+GGG | 0.641878 | 5:+13816417 | MsG0580025098.01.T01:intron |
TTAATCTTACCATGGAGCGG+TGG | 0.643744 | 5:-13817402 | None:intergenic |
AACTTAATCTTACCATGGAG+CGG | 0.649594 | 5:-13817405 | None:intergenic |
AAGATATGGAAGTGCCACGC+CGG | 0.655847 | 5:+13817770 | MsG0580025098.01.T01:CDS |
TTTCCTTACCCTTTCCAATG+GGG | 0.665262 | 5:+13817563 | MsG0580025098.01.T01:CDS |
AAAGCTGCCAATGAAGGTGG+TGG | 0.665648 | 5:+13815819 | MsG0580025098.01.T01:CDS |
CCGCGGCTGATAATAGAAGG+CGG | 0.690209 | 5:-13817795 | None:intergenic |
ACCAAAGCTGCCAATGAAGG+TGG | 0.697056 | 5:+13815816 | MsG0580025098.01.T01:CDS |
ATACCACCCAACCAGCTCCG+CGG | 0.707287 | 5:-13817812 | None:intergenic |
TAGGTGTACTAACGCCATGG+AGG | 0.753213 | 5:-13815957 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ACATAAATTAAGTTAAAAAT+AGG | + | Chr5:13818895-13818914 | MsG0580025098.01.T01:intron | 10.0% |
!! | CATAAATTAAGTTAAAAATA+GGG | + | Chr5:13818896-13818915 | MsG0580025098.01.T01:intron | 10.0% |
!!! | TATAATATTTTGAATTTTTC+TGG | - | Chr5:13818697-13818716 | None:intergenic | 10.0% |
!! | CACATAGATTATTATTATTA+GGG | - | Chr5:13819030-13819049 | None:intergenic | 15.0% |
!! | CATGCTAATAATAATAATAA+GGG | + | Chr5:13818510-13818529 | MsG0580025098.01.T01:intron | 15.0% |
!! | GAAATTAGTACAAATAATAT+TGG | - | Chr5:13818225-13818244 | None:intergenic | 15.0% |
!! | GCATTATATTGTATATTATT+CGG | + | Chr5:13818464-13818483 | MsG0580025098.01.T01:CDS | 15.0% |
!! | TCATGCTAATAATAATAATA+AGG | + | Chr5:13818509-13818528 | MsG0580025098.01.T01:intron | 15.0% |
!!! | AAATTCTAAAACAGAATAAT+GGG | + | Chr5:13817140-13817159 | MsG0580025098.01.T01:intron | 15.0% |
!!! | CTTAACAATATTTGTTAATT+TGG | + | Chr5:13819082-13819101 | MsG0580025098.01.T01:intron | 15.0% |
!!! | TAAATTCTAAAACAGAATAA+TGG | + | Chr5:13817139-13817158 | MsG0580025098.01.T01:intron | 15.0% |
!!! | TAGTGATTGAAAATTTTATA+GGG | + | Chr5:13818927-13818946 | MsG0580025098.01.T01:intron | 15.0% |
!!! | TGAAGATTGAAAATTTTATA+GGG | - | Chr5:13818613-13818632 | None:intergenic | 15.0% |
!! | AAAATGATTTGATTCAATGT+AGG | + | Chr5:13816402-13816421 | MsG0580025098.01.T01:intron | 20.0% |
!! | AAATATTGTGAGAAATATTG+TGG | - | Chr5:13819213-13819232 | None:intergenic | 20.0% |
!! | GAAAAGTTGACATATTTATA+GGG | + | Chr5:13818987-13819006 | MsG0580025098.01.T01:intron | 20.0% |
!! | GAAAAGTTGTCATATTTATA+GGG | - | Chr5:13818553-13818572 | None:intergenic | 20.0% |
!! | GCACATAGATTATTATTATT+AGG | - | Chr5:13819031-13819050 | None:intergenic | 20.0% |
!! | TAAGAAGCAAAAAATCAAAA+GGG | - | Chr5:13816967-13816986 | None:intergenic | 20.0% |
!! | TAGTAACTATAAGTTAAGAT+AGG | - | Chr5:13815979-13815998 | None:intergenic | 20.0% |
!! | TGAGTAATATAATGACTAAA+AGG | - | Chr5:13817698-13817717 | None:intergenic | 20.0% |
!! | TTAAGAAGCAAAAAATCAAA+AGG | - | Chr5:13816968-13816987 | None:intergenic | 20.0% |
!!! | AAATTTTCAATCACTACTTT+TGG | - | Chr5:13818923-13818942 | None:intergenic | 20.0% |
!!! | AAATTTTCAATCTTCACTTT+TGG | + | Chr5:13818617-13818636 | MsG0580025098.01.T01:intron | 20.0% |
!!! | AACTCTAATTAATTTTGCTA+AGG | - | Chr5:13817670-13817689 | None:intergenic | 20.0% |
!!! | ATAAGGGTTAAATATGTTTT+TGG | + | Chr5:13818526-13818545 | MsG0580025098.01.T01:intron | 20.0% |
!!! | ATATGAGTTTACTTTAAAAG+AGG | - | Chr5:13818645-13818664 | None:intergenic | 20.0% |
!!! | ATTAGGGTTAAATATGTTTT+TGG | - | Chr5:13819014-13819033 | None:intergenic | 20.0% |
!!! | GTAGTGATTGAAAATTTTAT+AGG | + | Chr5:13818926-13818945 | MsG0580025098.01.T01:intron | 20.0% |
!!! | GTGAAGATTGAAAATTTTAT+AGG | - | Chr5:13818614-13818633 | None:intergenic | 20.0% |
!!! | TAATTTTGCTAAGGATTTAA+GGG | - | Chr5:13817661-13817680 | None:intergenic | 20.0% |
!!! | TATGAGTTTACTTTAAAAGA+GGG | - | Chr5:13818644-13818663 | None:intergenic | 20.0% |
!!! | TCATTCTTGTTTTGATTTTA+GGG | + | Chr5:13817919-13817938 | MsG0580025098.01.T01:intron | 20.0% |
!!! | TTAATTTTGCTAAGGATTTA+AGG | - | Chr5:13817662-13817681 | None:intergenic | 20.0% |
!!! | TTCGATTTTTATGTAAATCT+TGG | + | Chr5:13816801-13816820 | MsG0580025098.01.T01:intron | 20.0% |
!!! | TTTTAGTCATTATATTACTC+AGG | + | Chr5:13817697-13817716 | MsG0580025098.01.T01:intron | 20.0% |
! | AAAAAAAGAGTAAAGCAGAA+AGG | - | Chr5:13818094-13818113 | None:intergenic | 25.0% |
! | AAAACCATAACAATTAAAGC+AGG | - | Chr5:13817053-13817072 | None:intergenic | 25.0% |
! | AAAATGACAGTGGTTTAAAA+TGG | + | Chr5:13819468-13819487 | MsG0580025098.01.T01:CDS | 25.0% |
! | AACTATAATTGTTCCTCAAA+TGG | + | Chr5:13816297-13816316 | MsG0580025098.01.T01:CDS | 25.0% |
! | ACATTTCTTCAATCTTTGTT+CGG | + | Chr5:13816475-13816494 | MsG0580025098.01.T01:CDS | 25.0% |
! | ACCTATAATTTCTATTGTTC+AGG | + | Chr5:13816543-13816562 | MsG0580025098.01.T01:CDS | 25.0% |
! | ACTATAATTGTTCCTCAAAT+GGG | + | Chr5:13816298-13816317 | MsG0580025098.01.T01:CDS | 25.0% |
! | ATAGTTTCATTTACCTCATA+AGG | - | Chr5:13816595-13816614 | None:intergenic | 25.0% |
! | ATTTCATAATTTCAGCATCT+TGG | + | Chr5:13818240-13818259 | MsG0580025098.01.T01:intron | 25.0% |
! | ATTTGAGGAACAATTATAGT+TGG | - | Chr5:13816298-13816317 | None:intergenic | 25.0% |
! | CGAAAAGTTGACATATTTAT+AGG | + | Chr5:13818986-13819005 | MsG0580025098.01.T01:intron | 25.0% |
! | CGAAAAGTTGTCATATTTAT+AGG | - | Chr5:13818554-13818573 | None:intergenic | 25.0% |
! | TATGAAACTTAATCTTACCA+TGG | - | Chr5:13817413-13817432 | None:intergenic | 25.0% |
! | TATTTACTGTCACAATTACA+TGG | + | Chr5:13817285-13817304 | MsG0580025098.01.T01:intron | 25.0% |
! | TTAATGCAATATTGAATTCC+AGG | - | Chr5:13815930-13815949 | None:intergenic | 25.0% |
! | TTACAAGTTCCAACAAATTA+AGG | - | Chr5:13816016-13816035 | None:intergenic | 25.0% |
! | TTACTAGCATTAACAAAAGT+AGG | + | Chr5:13818131-13818150 | MsG0580025098.01.T01:CDS | 25.0% |
!! | AAGTTGAAGGAAAATTTTAG+AGG | + | Chr5:13818955-13818974 | MsG0580025098.01.T01:intron | 25.0% |
!! | AGTTGAAGGAAAATTTTAGA+GGG | + | Chr5:13818956-13818975 | MsG0580025098.01.T01:intron | 25.0% |
!! | ATGATTTTCTTCTCTGTATT+TGG | + | Chr5:13818188-13818207 | MsG0580025098.01.T01:CDS | 25.0% |
!! | ATTTTTGCTTAAGATAGTAC+TGG | + | Chr5:13816175-13816194 | MsG0580025098.01.T01:intron | 25.0% |
!!! | CTATTGGATTTTTTGGTTTT+TGG | + | Chr5:13816740-13816759 | MsG0580025098.01.T01:CDS | 25.0% |
!!! | GTCATTCTTGTTTTGATTTT+AGG | + | Chr5:13817918-13817937 | MsG0580025098.01.T01:intron | 25.0% |
!!! | TGCTTTACTCTTTTTTTTCA+GGG | + | Chr5:13818097-13818116 | MsG0580025098.01.T01:intron | 25.0% |
!!! | TTAACTTGTGATCTGTTAAA+GGG | + | Chr5:13818056-13818075 | MsG0580025098.01.T01:intron | 25.0% |
!!! | TTCACTTTTCCTTAATTTGT+TGG | + | Chr5:13816004-13816023 | MsG0580025098.01.T01:intron | 25.0% |
!!! | TTCTTTAGTTTCTCTTTTTG+AGG | + | Chr5:13817631-13817650 | MsG0580025098.01.T01:CDS | 25.0% |
AAAAACACACACAAGGAATT+AGG | - | Chr5:13818012-13818031 | None:intergenic | 30.0% | |
AAAACACACACAAGGAATTA+GGG | - | Chr5:13818011-13818030 | None:intergenic | 30.0% | |
AATATATAGCTTACCCATCT+AGG | - | Chr5:13819261-13819280 | None:intergenic | 30.0% | |
AATCCTCAATTCTTTACCAT+TGG | - | Chr5:13816933-13816952 | None:intergenic | 30.0% | |
ACCATTGAAACAGGAAAATT+TGG | + | Chr5:13818404-13818423 | MsG0580025098.01.T01:intron | 30.0% | |
ACTTCCTGCTTTAATTGTTA+TGG | + | Chr5:13817046-13817065 | MsG0580025098.01.T01:CDS | 30.0% | |
AGAGTAATTCAAATTTCAGC+TGG | + | Chr5:13818161-13818180 | MsG0580025098.01.T01:CDS | 30.0% | |
AGTAACTAGTATGTTGCAAA+AGG | + | Chr5:13817106-13817125 | MsG0580025098.01.T01:CDS | 30.0% | |
ATCCTCAATTCTTTACCATT+GGG | - | Chr5:13816932-13816951 | None:intergenic | 30.0% | |
CAAAAAATCCAATAGCCATT+TGG | - | Chr5:13816735-13816754 | None:intergenic | 30.0% | |
CAATATAATGCTGCTATGAT+TGG | - | Chr5:13818455-13818474 | None:intergenic | 30.0% | |
CCAAATCTGTTTAACTAGTA+TGG | + | Chr5:13817166-13817185 | MsG0580025098.01.T01:intron | 30.0% | |
CCATACTAGTTAAACAGATT+TGG | - | Chr5:13817169-13817188 | None:intergenic | 30.0% | |
CTGTTTCAATGGTAAATAAC+AGG | - | Chr5:13818397-13818416 | None:intergenic | 30.0% | |
GACATAACATTAGTTATTCC+AGG | - | Chr5:13818362-13818381 | None:intergenic | 30.0% | |
GACTTATAGCCAATAAAACA+CGG | + | Chr5:13818297-13818316 | MsG0580025098.01.T01:intron | 30.0% | |
GCCTGAACAATAGAAATTAT+AGG | - | Chr5:13816547-13816566 | None:intergenic | 30.0% | |
TATGAACCAACAACTACAAT+TGG | - | Chr5:13816511-13816530 | None:intergenic | 30.0% | |
TCAATCTTTGATCATAATGC+AGG | + | Chr5:13816211-13816230 | MsG0580025098.01.T01:CDS | 30.0% | |
TGAATATACAGATCCTTATG+AGG | + | Chr5:13816579-13816598 | MsG0580025098.01.T01:CDS | 30.0% | |
TGTTTGTTTGAATTTCCTAG+AGG | + | Chr5:13816656-13816675 | MsG0580025098.01.T01:intron | 30.0% | |
TTATAGGGACTAAAAGTTGA+AGG | + | Chr5:13818942-13818961 | MsG0580025098.01.T01:intron | 30.0% | |
TTATAGGGACTAAAAGTTGA+AGG | - | Chr5:13818961-13818942 | None:intergenic | 30.0% | |
TTCAAGAAAAAACACACACA+AGG | - | Chr5:13818019-13818038 | None:intergenic | 30.0% | |
TTGTGAGAAATATTGTGGTA+TGG | - | Chr5:13819208-13819227 | None:intergenic | 30.0% | |
! | AAAGTGTTTCCATTTATGCA+GGG | + | Chr5:13817535-13817554 | MsG0580025098.01.T01:intron | 30.0% |
! | AAGTCCTACTTTCAATGTTT+TGG | + | Chr5:13817586-13817605 | MsG0580025098.01.T01:CDS | 30.0% |
! | AAGTTGAAGGAAAATTTTCG+AGG | - | Chr5:13818585-13818604 | None:intergenic | 30.0% |
! | AGTTGAAGGAAAATTTTCGA+GGG | - | Chr5:13818584-13818603 | None:intergenic | 30.0% |
! | CATAAGTTCAAGTTTCCAAA+TGG | + | Chr5:13816717-13816736 | MsG0580025098.01.T01:CDS | 30.0% |
! | CTGTTATTTACCATTGAAAC+AGG | + | Chr5:13818395-13818414 | MsG0580025098.01.T01:intron | 30.0% |
! | TAATAATCTATGTGCTGTTG+TGG | + | Chr5:13819036-13819055 | MsG0580025098.01.T01:intron | 30.0% |
! | TCCAAATTTTCCTGTTTCAA+TGG | - | Chr5:13818408-13818427 | None:intergenic | 30.0% |
!! | AAAAGTGTTTCCATTTATGC+AGG | + | Chr5:13817534-13817553 | MsG0580025098.01.T01:intron | 30.0% |
!! | GTTAACTTGTGATCTGTTAA+AGG | + | Chr5:13818055-13818074 | MsG0580025098.01.T01:intron | 30.0% |
!!! | CAAATGGCTATTGGATTTTT+TGG | + | Chr5:13816733-13816752 | MsG0580025098.01.T01:CDS | 30.0% |
!!! | CTGCTTTACTCTTTTTTTTC+AGG | + | Chr5:13818096-13818115 | MsG0580025098.01.T01:intron | 30.0% |
!!! | TGCATTGGTTGCATTAATTT+TGG | + | Chr5:13819412-13819431 | MsG0580025098.01.T01:CDS | 30.0% |
!!! | TGTGTTTTTTCTTGAATGCA+TGG | + | Chr5:13818023-13818042 | MsG0580025098.01.T01:intron | 30.0% |
!!! | TTGTTTTGATTTTAGGGAGT+AGG | + | Chr5:13817925-13817944 | MsG0580025098.01.T01:intron | 30.0% |
!!! | TTTTTTTTCAGGGAAAATGC+TGG | + | Chr5:13818107-13818126 | MsG0580025098.01.T01:intron | 30.0% |
AAAACGATCAAACATGCACT+AGG | - | Chr5:13817192-13817211 | None:intergenic | 35.0% | |
AAAAGCTCATTGAGTTTGCA+AGG | - | Chr5:13819551-13819570 | None:intergenic | 35.0% | |
AACTTAATCTTACCATGGAG+CGG | - | Chr5:13817408-13817427 | None:intergenic | 35.0% | |
AATGCTGCTATGATTGGTAA+AGG | - | Chr5:13818449-13818468 | None:intergenic | 35.0% | |
ACATATAACTGTTGCTGCAT+TGG | + | Chr5:13819397-13819416 | MsG0580025098.01.T01:CDS | 35.0% | |
ACATATGGAACTACAGATAG+TGG | - | Chr5:13816873-13816892 | None:intergenic | 35.0% | |
AGGTTTACTATGACAATGAG+AGG | + | Chr5:13816676-13816695 | MsG0580025098.01.T01:CDS | 35.0% | |
ATAATTGTTCCTCAAATGGG+TGG | + | Chr5:13816301-13816320 | MsG0580025098.01.T01:CDS | 35.0% | |
ATGAACAAGAAAGTCCTAGA+TGG | + | Chr5:13819244-13819263 | MsG0580025098.01.T01:CDS | 35.0% | |
CAGTAAATAGCACTGCAAAT+CGG | - | Chr5:13817274-13817293 | None:intergenic | 35.0% | |
CATTGTCATAGTAAACCTCT+AGG | - | Chr5:13816674-13816693 | None:intergenic | 35.0% | |
CCTAACATCTCCATTATACA+AGG | - | Chr5:13819507-13819526 | None:intergenic | 35.0% | |
GAAAATACACCCTGCATAAA+TGG | - | Chr5:13817547-13817566 | None:intergenic | 35.0% | |
GAGAAGTTCACCTTGTATAA+TGG | + | Chr5:13819494-13819513 | MsG0580025098.01.T01:CDS | 35.0% | |
GCTTCCAAAACATTGAAAGT+AGG | - | Chr5:13817593-13817612 | None:intergenic | 35.0% | |
GGTTTACTATGACAATGAGA+GGG | + | Chr5:13816677-13816696 | MsG0580025098.01.T01:CDS | 35.0% | |
TAATTTCAGCATCTTGGCAT+TGG | + | Chr5:13818246-13818265 | MsG0580025098.01.T01:intron | 35.0% | |
TCAAGTTTCCAAATGGCTAT+TGG | + | Chr5:13816724-13816743 | MsG0580025098.01.T01:CDS | 35.0% | |
TCGGTCATTTATAGACTTCA+CGG | - | Chr5:13817255-13817274 | None:intergenic | 35.0% | |
TGAACAAGAAAGTCCTAGAT+GGG | + | Chr5:13819245-13819264 | MsG0580025098.01.T01:CDS | 35.0% | |
TTCAGAACCAAATTTGTGCT+AGG | + | Chr5:13819159-13819178 | MsG0580025098.01.T01:CDS | 35.0% | |
TTCCCAATGGTAAAGAATTG+AGG | + | Chr5:13816927-13816946 | MsG0580025098.01.T01:intron | 35.0% | |
! | ATGACAGTGGTTTAAAATGG+TGG | + | Chr5:13819471-13819490 | MsG0580025098.01.T01:CDS | 35.0% |
! | ATTGGTAGTTTACTCGTTTG+TGG | + | Chr5:13818264-13818283 | MsG0580025098.01.T01:intron | 35.0% |
! | ATTTTCCTTACCCTTTCCAA+TGG | + | Chr5:13817561-13817580 | MsG0580025098.01.T01:CDS | 35.0% |
! | CCTTGTATAATGGAGATGTT+AGG | + | Chr5:13819504-13819523 | MsG0580025098.01.T01:CDS | 35.0% |
! | TGACAGTGGTTTAAAATGGT+GGG | + | Chr5:13819472-13819491 | MsG0580025098.01.T01:CDS | 35.0% |
! | TGTTATGGTTTTCATCTCAC+AGG | + | Chr5:13817061-13817080 | MsG0580025098.01.T01:CDS | 35.0% |
! | TGTTTGTGTCCGTGTTTTAT+TGG | - | Chr5:13818309-13818328 | None:intergenic | 35.0% |
! | TTTTCCTTACCCTTTCCAAT+GGG | + | Chr5:13817562-13817581 | MsG0580025098.01.T01:CDS | 35.0% |
! | TTTTCTTGAATGCATGGTAG+AGG | + | Chr5:13818029-13818048 | MsG0580025098.01.T01:intron | 35.0% |
!! | ATTTGGTTCTGAAACTGTTG+AGG | - | Chr5:13819152-13819171 | None:intergenic | 35.0% |
!! | TGACTTGTTGTTATATGCAG+TGG | - | Chr5:13817336-13817355 | None:intergenic | 35.0% |
!! | TTGTTTTACTTGCAGTACAC+TGG | + | Chr5:13817729-13817748 | MsG0580025098.01.T01:intron | 35.0% |
!! | TTTGGAAGCTTTTGCTATGA+TGG | + | Chr5:13817604-13817623 | MsG0580025098.01.T01:CDS | 35.0% |
AACTGTTGAGGTTACAGAAC+TGG | - | Chr5:13819140-13819159 | None:intergenic | 40.0% | |
AATGTAGGCTGAGAAGACTA+GGG | + | Chr5:13816417-13816436 | MsG0580025098.01.T01:intron | 40.0% | |
ACTCGTTTGTGGTTGTCTAT+AGG | + | Chr5:13818275-13818294 | MsG0580025098.01.T01:intron | 40.0% | |
AGTCCAGCGAAAGTTACATA+TGG | - | Chr5:13816888-13816907 | None:intergenic | 40.0% | |
ATGACAATGAGAGGGATTCA+AGG | + | Chr5:13816685-13816704 | MsG0580025098.01.T01:CDS | 40.0% | |
CAGCATTACCTTCTAACTCT+TGG | + | Chr5:13816256-13816275 | MsG0580025098.01.T01:CDS | 40.0% | |
CGATTGCCAATTGTAGTTGT+TGG | + | Chr5:13816502-13816521 | MsG0580025098.01.T01:CDS | 40.0% | |
CTAGGCTTCTCATTCTTCTT+AGG | + | Chr5:13819177-13819196 | MsG0580025098.01.T01:CDS | 40.0% | |
CTATCAACTTGGTTTCCCAA+TGG | + | Chr5:13816914-13816933 | MsG0580025098.01.T01:CDS | 40.0% | |
CTGTAATGCCAAGAGTTAGA+AGG | - | Chr5:13816267-13816286 | None:intergenic | 40.0% | |
CTTGCGAAATGCGTTGAAAT+TGG | + | Chr5:13817023-13817042 | MsG0580025098.01.T01:CDS | 40.0% | |
GATGCAGCTAAAAATGACAG+TGG | + | Chr5:13819458-13819477 | MsG0580025098.01.T01:CDS | 40.0% | |
GTCATTTATAGACTTCACGG+CGG | - | Chr5:13817252-13817271 | None:intergenic | 40.0% | |
GTTCCATATGTAACTTTCGC+TGG | + | Chr5:13816882-13816901 | MsG0580025098.01.T01:CDS | 40.0% | |
TATACCGATGAAGATACTGC+AGG | - | Chr5:13817226-13817245 | None:intergenic | 40.0% | |
TATGTAACTTTCGCTGGACT+CGG | + | Chr5:13816888-13816907 | MsG0580025098.01.T01:CDS | 40.0% | |
TCTTCCTGCAGTATCTTCAT+CGG | + | Chr5:13817219-13817238 | MsG0580025098.01.T01:intron | 40.0% | |
TGAGAAGCCTAGCACAAATT+TGG | - | Chr5:13819169-13819188 | None:intergenic | 40.0% | |
TTTCCTTACCCTTTCCAATG+GGG | + | Chr5:13817563-13817582 | MsG0580025098.01.T01:CDS | 40.0% | |
!! | GAACTACAGATAGTGGACTA+AGG | - | Chr5:13816866-13816885 | None:intergenic | 40.0% |
!! | GCTTTGTTTAGTGGCATGTT+TGG | + | Chr5:13817949-13817968 | MsG0580025098.01.T01:CDS | 40.0% |
!! | GTTTTTGGAGAAATGCTGTC+AGG | + | Chr5:13816755-13816774 | MsG0580025098.01.T01:CDS | 40.0% |
AGATAGGTGTACTAACGCCA+TGG | - | Chr5:13815963-13815982 | None:intergenic | 45.0% | |
ATTGTTCCTCAAATGGGTGG+AGG | + | Chr5:13816304-13816323 | MsG0580025098.01.T01:CDS | 45.0% | |
CAATGTAGGCTGAGAAGACT+AGG | + | Chr5:13816416-13816435 | MsG0580025098.01.T01:intron | 45.0% | |
CAGACACTTCTGTTTGTGTC+TGG | + | Chr5:13816445-13816464 | MsG0580025098.01.T01:CDS | 45.0% | |
CCAGGTAATTGCTCTTTCAC+TGG | - | Chr5:13815912-13815931 | None:intergenic | 45.0% | |
CCAGTGAAAGAGCAATTACC+TGG | + | Chr5:13815909-13815928 | MsG0580025098.01.T01:CDS | 45.0% | |
GCAGGTCAAGCAGTGATATT+GGG | + | Chr5:13816229-13816248 | MsG0580025098.01.T01:CDS | 45.0% | |
GGCATGTTTGGTTGTGTAAC+TGG | + | Chr5:13817961-13817980 | MsG0580025098.01.T01:CDS | 45.0% | |
TAGGACTTCCCCATTGGAAA+GGG | - | Chr5:13817574-13817593 | None:intergenic | 45.0% | |
TATTCCAGGTGTCTGTGTGT+CGG | - | Chr5:13818348-13818367 | None:intergenic | 45.0% | |
TCCATATCTTGCAGCAGCAT+AGG | - | Chr5:13817760-13817779 | None:intergenic | 45.0% | |
TCCTATGCTGCTGCAAGATA+TGG | + | Chr5:13817756-13817775 | MsG0580025098.01.T01:CDS | 45.0% | |
TGAAAGTAGGACTTCCCCAT+TGG | - | Chr5:13817580-13817599 | None:intergenic | 45.0% | |
TGCAGGTCAAGCAGTGATAT+TGG | + | Chr5:13816228-13816247 | MsG0580025098.01.T01:CDS | 45.0% | |
TGGAACTATGTAGCTTCTGC+TGG | + | Chr5:13819102-13819121 | MsG0580025098.01.T01:intron | 45.0% | |
TTAATCTTACCATGGAGCGG+TGG | - | Chr5:13817405-13817424 | None:intergenic | 45.0% | |
! | AATTGCTCTTTCACTGGCTG+TGG | - | Chr5:13815906-13815925 | None:intergenic | 45.0% |
! | TATGTAGCTTCTGCTGGTCT+TGG | + | Chr5:13819108-13819127 | MsG0580025098.01.T01:intron | 45.0% |
!! | GGAGTAGGTGCTTTGTTTAG+TGG | + | Chr5:13817940-13817959 | MsG0580025098.01.T01:CDS | 45.0% |
!!! | AAAAAATTCTAATTTTTTTT+AGG | + | Chr5:13818822-13818841 | MsG0580025098.01.T01:intron | 5.0% |
!!! | AAAAAATTCTAATTTTTTTT+TGG | - | Chr5:13818841-13818822 | None:intergenic | 5.0% |
!!! | ATGAATTTTAATATTTTTTA+TGG | + | Chr5:13818768-13818787 | MsG0580025098.01.T01:intron | 5.0% |
AAAGCTGCCAATGAAGGTGG+TGG | + | Chr5:13815819-13815838 | MsG0580025098.01.T01:CDS | 50.0% | |
ACATCTCCTCCACCCATTTG+AGG | - | Chr5:13816313-13816332 | None:intergenic | 50.0% | |
ACCAAAGCTGCCAATGAAGG+TGG | + | Chr5:13815816-13815835 | MsG0580025098.01.T01:CDS | 50.0% | |
ACCACCTTCATTGGCAGCTT+TGG | - | Chr5:13815820-13815839 | None:intergenic | 50.0% | |
CTGATAATAGAAGGCGGCAC+CGG | - | Chr5:13817792-13817811 | None:intergenic | 50.0% | |
CTTCCCCATTGGAAAGGGTA+AGG | - | Chr5:13817569-13817588 | None:intergenic | 50.0% | |
GACACCAAAGCTGCCAATGA+AGG | + | Chr5:13815813-13815832 | MsG0580025098.01.T01:CDS | 50.0% | |
GCATTAACAGTCCACCTCCA+TGG | + | Chr5:13815943-13815962 | MsG0580025098.01.T01:CDS | 50.0% | |
GGTGCTAAAAATGCAGGTGG+TGG | + | Chr5:13815852-13815871 | MsG0580025098.01.T01:CDS | 50.0% | |
GTAGGACTTCCCCATTGGAA+AGG | - | Chr5:13817575-13817594 | None:intergenic | 50.0% | |
TAGGTGTACTAACGCCATGG+AGG | - | Chr5:13815960-13815979 | None:intergenic | 50.0% | |
! | GGACTCGGTCTCTATCAACT+TGG | + | Chr5:13816903-13816922 | MsG0580025098.01.T01:CDS | 50.0% |
!! | AAGATATGGAAGTGCCACGC+CGG | + | Chr5:13817770-13817789 | MsG0580025098.01.T01:CDS | 50.0% |
ACGGACACAAACACGCACAC+AGG | + | Chr5:13818316-13818335 | MsG0580025098.01.T01:intron | 55.0% | |
CCGCCTTCTATTATCAGCCG+CGG | + | Chr5:13817795-13817814 | MsG0580025098.01.T01:CDS | 55.0% | |
CCGCGGCTGATAATAGAAGG+CGG | - | Chr5:13817798-13817817 | None:intergenic | 55.0% | |
CTTACCATGGAGCGGTGGTT+AGG | - | Chr5:13817400-13817419 | None:intergenic | 55.0% | |
GAATCCTAACCACCGCTCCA+TGG | + | Chr5:13817393-13817412 | MsG0580025098.01.T01:CDS | 55.0% | |
GCTCCGCGGCTGATAATAGA+AGG | - | Chr5:13817801-13817820 | None:intergenic | 55.0% | |
GGATTCCAGCGCGATCAGTT+CGG | - | Chr5:13817379-13817398 | None:intergenic | 55.0% | |
GTGTACTAACGCCATGGAGG+TGG | - | Chr5:13815957-13815976 | None:intergenic | 55.0% | |
TCTATTATCAGCCGCGGAGC+TGG | + | Chr5:13817801-13817820 | MsG0580025098.01.T01:CDS | 55.0% | |
! | GGCGGTGCTAAAAATGCAGG+TGG | + | Chr5:13815849-13815868 | MsG0580025098.01.T01:CDS | 55.0% |
! | TCTTTCACTGGCTGTGGTGC+TGG | - | Chr5:13815900-13815919 | None:intergenic | 55.0% |
!! | AATGAAGGTGGTGGTGGAGG+CGG | + | Chr5:13815828-13815847 | MsG0580025098.01.T01:CDS | 55.0% |
AGCGCGATCAGTTCGGCAAC+TGG | - | Chr5:13817372-13817391 | None:intergenic | 60.0% | |
AGTTGCCGAACTGATCGCGC+TGG | + | Chr5:13817371-13817390 | MsG0580025098.01.T01:CDS | 60.0% | |
ATACCACCCAACCAGCTCCG+CGG | - | Chr5:13817815-13817834 | None:intergenic | 60.0% | |
GCCTCCACCACCACCTTCAT+TGG | - | Chr5:13815829-13815848 | None:intergenic | 60.0% | |
TATCAGCCGCGGAGCTGGTT+GGG | + | Chr5:13817806-13817825 | MsG0580025098.01.T01:CDS | 60.0% | |
TCCAGGTGTCTGTGTGTCGG+CGG | - | Chr5:13818345-13818364 | None:intergenic | 60.0% | |
TTATCAGCCGCGGAGCTGGT+TGG | + | Chr5:13817805-13817824 | MsG0580025098.01.T01:CDS | 60.0% | |
! | GCTGCCAATGAAGGTGGTGG+TGG | + | Chr5:13815822-13815841 | MsG0580025098.01.T01:CDS | 60.0% |
! | GGCGGCGGTGCTAAAAATGC+AGG | + | Chr5:13815846-13815865 | MsG0580025098.01.T01:CDS | 60.0% |
!! | GCCAATGAAGGTGGTGGTGG+AGG | + | Chr5:13815825-13815844 | MsG0580025098.01.T01:CDS | 60.0% |
ACCGCCGACACACAGACACC+TGG | + | Chr5:13818341-13818360 | MsG0580025098.01.T01:intron | 65.0% | |
!! | AATAGAAGGCGGCACCGGCG+TGG | - | Chr5:13817787-13817806 | None:intergenic | 65.0% |
!! | GAAGGTGGTGGTGGAGGCGG+CGG | + | Chr5:13815831-13815850 | MsG0580025098.01.T01:CDS | 70.0% |
CAGCCGCGGAGCTGGTTGGG+TGG | + | Chr5:13817809-13817828 | MsG0580025098.01.T01:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr5 | gene | 13815789 | 13819583 | 13815789 | ID=MsG0580025098.01;Name=MsG0580025098.01 |
Chr5 | mRNA | 13815789 | 13819583 | 13815789 | ID=MsG0580025098.01.T01;Parent=MsG0580025098.01;Name=MsG0580025098.01.T01;_AED=0.22;_eAED=0.25;_QI=0|0|0|1|1|1|14|0|552 |
Chr5 | exon | 13815789 | 13815970 | 13815789 | ID=MsG0580025098.01.T01:exon:5650;Parent=MsG0580025098.01.T01 |
Chr5 | exon | 13816192 | 13816330 | 13816192 | ID=MsG0580025098.01.T01:exon:5651;Parent=MsG0580025098.01.T01 |
Chr5 | exon | 13816424 | 13816600 | 13816424 | ID=MsG0580025098.01.T01:exon:5652;Parent=MsG0580025098.01.T01 |
Chr5 | exon | 13816676 | 13816776 | 13816676 | ID=MsG0580025098.01.T01:exon:5653;Parent=MsG0580025098.01.T01 |
Chr5 | exon | 13816860 | 13816935 | 13816860 | ID=MsG0580025098.01.T01:exon:5654;Parent=MsG0580025098.01.T01 |
Chr5 | exon | 13817023 | 13817127 | 13817023 | ID=MsG0580025098.01.T01:exon:5655;Parent=MsG0580025098.01.T01 |
Chr5 | exon | 13817320 | 13817414 | 13817320 | ID=MsG0580025098.01.T01:exon:5656;Parent=MsG0580025098.01.T01 |
Chr5 | exon | 13817556 | 13817652 | 13817556 | ID=MsG0580025098.01.T01:exon:5657;Parent=MsG0580025098.01.T01 |
Chr5 | exon | 13817744 | 13817830 | 13817744 | ID=MsG0580025098.01.T01:exon:5658;Parent=MsG0580025098.01.T01 |
Chr5 | exon | 13817940 | 13817998 | 13817940 | ID=MsG0580025098.01.T01:exon:5659;Parent=MsG0580025098.01.T01 |
Chr5 | exon | 13818118 | 13818209 | 13818118 | ID=MsG0580025098.01.T01:exon:5660;Parent=MsG0580025098.01.T01 |
Chr5 | exon | 13818417 | 13818494 | 13818417 | ID=MsG0580025098.01.T01:exon:5661;Parent=MsG0580025098.01.T01 |
Chr5 | exon | 13819115 | 13819266 | 13819115 | ID=MsG0580025098.01.T01:exon:5662;Parent=MsG0580025098.01.T01 |
Chr5 | exon | 13819365 | 13819583 | 13819365 | ID=MsG0580025098.01.T01:exon:5663;Parent=MsG0580025098.01.T01 |
Chr5 | CDS | 13815789 | 13815970 | 13815789 | ID=MsG0580025098.01.T01:cds;Parent=MsG0580025098.01.T01 |
Chr5 | CDS | 13816192 | 13816330 | 13816192 | ID=MsG0580025098.01.T01:cds;Parent=MsG0580025098.01.T01 |
Chr5 | CDS | 13816424 | 13816600 | 13816424 | ID=MsG0580025098.01.T01:cds;Parent=MsG0580025098.01.T01 |
Chr5 | CDS | 13816676 | 13816776 | 13816676 | ID=MsG0580025098.01.T01:cds;Parent=MsG0580025098.01.T01 |
Chr5 | CDS | 13816860 | 13816935 | 13816860 | ID=MsG0580025098.01.T01:cds;Parent=MsG0580025098.01.T01 |
Chr5 | CDS | 13817023 | 13817127 | 13817023 | ID=MsG0580025098.01.T01:cds;Parent=MsG0580025098.01.T01 |
Chr5 | CDS | 13817320 | 13817414 | 13817320 | ID=MsG0580025098.01.T01:cds;Parent=MsG0580025098.01.T01 |
Chr5 | CDS | 13817556 | 13817652 | 13817556 | ID=MsG0580025098.01.T01:cds;Parent=MsG0580025098.01.T01 |
Chr5 | CDS | 13817744 | 13817830 | 13817744 | ID=MsG0580025098.01.T01:cds;Parent=MsG0580025098.01.T01 |
Chr5 | CDS | 13817940 | 13817998 | 13817940 | ID=MsG0580025098.01.T01:cds;Parent=MsG0580025098.01.T01 |
Chr5 | CDS | 13818118 | 13818209 | 13818118 | ID=MsG0580025098.01.T01:cds;Parent=MsG0580025098.01.T01 |
Chr5 | CDS | 13818417 | 13818494 | 13818417 | ID=MsG0580025098.01.T01:cds;Parent=MsG0580025098.01.T01 |
Chr5 | CDS | 13819115 | 13819266 | 13819115 | ID=MsG0580025098.01.T01:cds;Parent=MsG0580025098.01.T01 |
Chr5 | CDS | 13819365 | 13819583 | 13819365 | ID=MsG0580025098.01.T01:cds;Parent=MsG0580025098.01.T01 |
Gene Sequence |
Protein sequence |