AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580025183.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580025183.01.T01 MTR_5g023760 87.797 295 16 1 1 275 38 332 0.0 515
MsG0580025183.01.T01 MTR_5g023760 88.235 272 12 1 1 252 38 309 1.66e-169 473
MsG0580025183.01.T01 MTR_8g028040 52.941 238 92 2 18 235 32 269 1.71e-83 254
MsG0580025183.01.T01 MTR_3g058410 49.020 255 105 2 18 247 70 324 7.31e-82 251
MsG0580025183.01.T01 MTR_5g095470 48.496 266 111 3 18 257 55 320 3.35e-81 249
MsG0580025183.01.T01 MTR_1g115485 51.316 76 33 2 251 322 645 720 1.65e-15 77.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580025183.01.T01 AT4G35640 67.399 273 69 1 16 268 71 343 7.75e-124 359
MsG0580025183.01.T01 AT2G17640 67.518 274 69 1 15 268 33 306 7.98e-124 358
MsG0580025183.01.T01 AT5G56760 49.438 267 110 4 18 264 45 306 7.57e-83 253
MsG0580025183.01.T01 AT1G55920 46.332 259 114 3 12 245 42 300 3.83e-77 239
MsG0580025183.01.T01 AT3G13110 46.667 255 111 3 16 245 123 377 4.64e-76 238

Find 105 sgRNAs with CRISPR-Local

Find 344 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAGACGGCTCTGACCCTATT+TGG 0.139178 5:+14830930 MsG0580025183.01.T01:CDS
TTGGGAAATGGTGGTGTTTC+GGG 0.167350 5:-14830582 None:intergenic
ATTGGTGAAACTGCTGTTAT+TGG 0.252979 5:+14833631 MsG0580025183.01.T01:CDS
GTTGGGAAATGGTGGTGTTT+CGG 0.260585 5:-14830583 None:intergenic
TGCTTAACAGCTTCCCAAAT+AGG 0.273449 5:-14830944 None:intergenic
TCTTCAAAGTCCTACTCTTT+TGG 0.285311 5:+14831465 MsG0580025183.01.T01:CDS
CAGTGCCCCTTCACCTACTT+TGG 0.314526 5:-14834079 None:intergenic
CTTTCTGTATGCAAGTGTTT+TGG 0.317478 5:+14831396 MsG0580025183.01.T01:CDS
CATGGGACAGGCGTGATTAT+TGG 0.318467 5:+14833613 MsG0580025183.01.T01:CDS
GGAATACCGGCAAAAGTTAT+TGG 0.319686 5:+14834317 MsG0580025183.01.T01:CDS
ATCAATCCGCCTCGATGTTC+AGG 0.320091 5:+14831546 MsG0580025183.01.T01:CDS
ATTTGGCAGGCTGTGACATT+AGG 0.333673 5:+14834024 MsG0580025183.01.T01:intron
CAATAATGTTATGGTGTCTA+TGG 0.353738 5:+14836287 MsG0580025183.01.T01:CDS
GCTTAACAGCTTCCCAAATA+GGG 0.353953 5:-14830943 None:intergenic
AAAATATCGCAATAATGTTA+TGG 0.357273 5:+14836278 MsG0580025183.01.T01:CDS
GCGAAGCTGCCAACCAAGTT+TGG 0.357507 5:+14836152 MsG0580025183.01.T01:CDS
AGACGGCTCTGACCCTATTT+GGG 0.360623 5:+14830931 MsG0580025183.01.T01:CDS
GCAGGAACTGTTACTGTTGT+TGG 0.371537 5:-14830601 None:intergenic
GAGCCGTCTAAGATGGATTC+AGG 0.379278 5:-14830917 None:intergenic
TACAGAAAGCTACTCAAAAC+TGG 0.396999 5:-14831382 None:intergenic
CTCGATAAGTTTGCAGAGAA+TGG 0.399780 5:-14832991 None:intergenic
GGGTTACACGCACGGGGATA+AGG 0.401910 5:-14830562 None:intergenic
AGTGCCCCTTCACCTACTTT+GGG 0.406867 5:-14834078 None:intergenic
CTGTTACTGTTGTTGGGAAA+TGG 0.414427 5:-14830594 None:intergenic
GGAGGCACGGGGAAGGAAAC+AGG 0.416586 5:+14834045 MsG0580025183.01.T01:CDS
GGCCAGCAACTTACCAAACT+TGG 0.434399 5:-14836165 None:intergenic
AGGCCAAGACTTTGCGTCCC+TGG 0.436340 5:-14833033 None:intergenic
CCATGTCTCATGGTTAAAGA+TGG 0.441408 5:-14834359 None:intergenic
GGTAAACCCATAGCATAAAC+AGG 0.441968 5:-14830884 None:intergenic
GGGACGCAAAGTCTTGGCCT+TGG 0.444248 5:+14833036 MsG0580025183.01.T01:CDS
CAGGAACTGTTACTGTTGTT+GGG 0.445342 5:-14830600 None:intergenic
CAAAAGTTATTGGAGGTCTC+CGG 0.450080 5:+14834327 MsG0580025183.01.T01:CDS
TCTAAGATGGATTCAGGATC+CGG 0.451899 5:-14830911 None:intergenic
GTAGGTGAAGGGGCACTGAT+TGG 0.454003 5:+14834084 MsG0580025183.01.T01:CDS
GTGTTTCGGGTTACACGCAC+GGG 0.456168 5:-14830569 None:intergenic
AAGCATTGTGGCGGGAATAC+CGG 0.466055 5:+14834304 MsG0580025183.01.T01:intron
TGCTATGGGTTTACCTGACC+CGG 0.472146 5:+14830892 MsG0580025183.01.T01:exon
GGTGTTTCGGGTTACACGCA+CGG 0.477248 5:-14830570 None:intergenic
AGCGCATGCATTGTGGCACC+AGG 0.484817 5:+14833015 MsG0580025183.01.T01:CDS
AGGGTCAGAGCCGTCTAAGA+TGG 0.485295 5:-14830924 None:intergenic
GGCTGTGACATTAGGAGGCA+CGG 0.498738 5:+14834032 MsG0580025183.01.T01:intron
GCACCAGGGACGCAAAGTCT+TGG 0.500311 5:+14833030 MsG0580025183.01.T01:CDS
ATGGATTCAGGATCCGGGTC+AGG 0.500593 5:-14830905 None:intergenic
GAAGGTGTGATGATTGCTGC+TGG 0.501419 5:+14834144 MsG0580025183.01.T01:CDS
CTTGTGTGAGTCATCACAAT+TGG 0.505244 5:+14830790 MsG0580025183.01.T01:five_prime_UTR
TTCATCGATACCTGCGGGGA+GGG 0.505922 5:-14834188 None:intergenic
GTTGCGAACTGCCTTACCAT+TGG 0.511868 5:-14836390 None:intergenic
AAAAGTTATTGGAGGTCTCC+GGG 0.513324 5:+14834328 MsG0580025183.01.T01:CDS
TCATCGATACCTGCGGGGAG+GGG 0.515341 5:-14834187 None:intergenic
TTTGGAATTGACATTCATCC+TGG 0.517254 5:+14833190 MsG0580025183.01.T01:CDS
CGCCATCCCAAAGTAGGTGA+AGG 0.528499 5:+14834072 MsG0580025183.01.T01:CDS
GCTGTGACATTAGGAGGCAC+GGG 0.536433 5:+14834033 MsG0580025183.01.T01:CDS
CCCCTTCACCTACTTTGGGA+TGG 0.538383 5:-14834074 None:intergenic
TTAAAGATGGGTCATGCTCC+CGG 0.540962 5:-14834346 None:intergenic
GGTTTGCTTACCATGTCTCA+TGG 0.541852 5:-14834369 None:intergenic
GAAGGGGCACTGATTGGAGC+TGG 0.545218 5:+14834090 MsG0580025183.01.T01:CDS
TGGCAGGCTGTGACATTAGG+AGG 0.549812 5:+14834027 MsG0580025183.01.T01:intron
AGCAACTTACCAAACTTGGT+TGG 0.550107 5:-14836161 None:intergenic
ACTGTAACTGAAGTGGTGTA+TGG 0.556399 5:-14830734 None:intergenic
TTGGGAGGTACAGGCAGAGA+AGG 0.560021 5:+14831357 MsG0580025183.01.T01:intron
TTGTCTTAAAGCATTGTGGC+GGG 0.560601 5:+14834296 MsG0580025183.01.T01:intron
CGCGCGACATGTTGAACCAA+TGG 0.563390 5:+14836374 MsG0580025183.01.T01:CDS
CATGTCTCATGGTTAAAGAT+GGG 0.566129 5:-14834358 None:intergenic
AAGAGTAACTGTAACTGAAG+TGG 0.566842 5:-14830741 None:intergenic
AACACGGCTTTGCAAAGCCA+AGG 0.569616 5:-14833053 None:intergenic
GATCCTGAATCCATCTTAGA+CGG 0.575156 5:+14830914 MsG0580025183.01.T01:CDS
GGTGATCGCCATCCCAAAGT+AGG 0.579853 5:+14834066 MsG0580025183.01.T01:CDS
TTTCTTATTAAGCACTCGCA+TGG 0.580956 5:+14830767 MsG0580025183.01.T01:five_prime_UTR
GACATTAGGAGGCACGGGGA+AGG 0.585579 5:+14834038 MsG0580025183.01.T01:CDS
TATGGTGTCTATGGCGTCGA+AGG 0.586915 5:+14836296 MsG0580025183.01.T01:CDS
GACATGTTGAACCAATGGTA+AGG 0.590495 5:+14836379 MsG0580025183.01.T01:CDS
TAAATGATGCCCCTCCCCGC+AGG 0.591313 5:+14834178 MsG0580025183.01.T01:CDS
GGAGCTGGTTCAACTATACT+CGG 0.592954 5:+14834105 MsG0580025183.01.T01:CDS
TGCTTTGTCTTAAAGCATTG+TGG 0.593770 5:+14834292 MsG0580025183.01.T01:intron
GCCATCCCAAAGTAGGTGAA+GGG 0.595201 5:+14834073 MsG0580025183.01.T01:CDS
AAGACGATAAGAAAAGAGAG+AGG 0.597467 5:-14830849 None:intergenic
CTAAGATGGATTCAGGATCC+GGG 0.601089 5:-14830910 None:intergenic
AGGAACAATAAAGTGTCAGA+AGG 0.609671 5:+14836316 MsG0580025183.01.T01:CDS
ATCGAGTAGCGCATGCATTG+TGG 0.609852 5:+14833008 MsG0580025183.01.T01:CDS
TTACTGTTGTTGGGAAATGG+TGG 0.616221 5:-14830591 None:intergenic
ATACCGGCAAAAGTTATTGG+AGG 0.620950 5:+14834320 MsG0580025183.01.T01:CDS
TTTGCAAAGCCGTGTTAGCG+AGG 0.622043 5:+14833060 MsG0580025183.01.T01:CDS
AGTAAGCTACCTCGCTAACA+CGG 0.624456 5:-14833069 None:intergenic
AGACGATAAGAAAAGAGAGA+GGG 0.627024 5:-14830848 None:intergenic
CCATCTTTAACCATGAGACA+TGG 0.631571 5:+14834359 MsG0580025183.01.T01:CDS
TGTAATAGTAAAACAAGTGG+TGG 0.634071 5:-14830700 None:intergenic
CCATCCCAAAGTAGGTGAAG+GGG 0.637315 5:+14834074 MsG0580025183.01.T01:CDS
AAAGAGTAGGACTTTGAAGA+CGG 0.640299 5:-14831462 None:intergenic
TTTGTCTTAAAGCATTGTGG+CGG 0.641313 5:+14834295 MsG0580025183.01.T01:intron
GAGGGGCATCATTTAACACA+AGG 0.646008 5:-14834170 None:intergenic
AGCTGTGTAGCCAAAAGAGT+AGG 0.656992 5:-14831475 None:intergenic
TTTAGAGATGAAAAGTCCAG+TGG 0.663044 5:+14834908 MsG0580025183.01.T01:CDS
GCGTTTCTCAGAGACCATGT+TGG 0.664405 5:-14830823 None:intergenic
ATTCATCGATACCTGCGGGG+AGG 0.669803 5:-14834189 None:intergenic
TAAGCAAGAAGCTAAGCTTG+AGG 0.674117 5:+14830961 MsG0580025183.01.T01:CDS
GCGCATGCATTGTGGCACCA+GGG 0.679516 5:+14833016 MsG0580025183.01.T01:CDS
TGTTTCGGGTTACACGCACG+GGG 0.680622 5:-14830568 None:intergenic
GGGTGTAATAGTAAAACAAG+TGG 0.683221 5:-14830703 None:intergenic
CTGTGACATTAGGAGGCACG+GGG 0.687363 5:+14834034 MsG0580025183.01.T01:CDS
TTGGCTTAATCTCTCCAACA+TGG 0.706436 5:+14830809 MsG0580025183.01.T01:five_prime_UTR
TTGAAATCACCTGAACATCG+AGG 0.722778 5:-14831555 None:intergenic
AAATCACCTGAACATCGAGG+CGG 0.728350 5:-14831552 None:intergenic
AGGGGCATCATTTAACACAA+GGG 0.728651 5:-14834169 None:intergenic
AAGGTGATATGAAAGAAGTG+CGG 0.732942 5:+14836335 MsG0580025183.01.T01:CDS
GATATTCATCGATACCTGCG+GGG 0.761375 5:-14834192 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGCTAAAAAAATACAAATA+AGG - Chr5:14832355-14832374 None:intergenic 15.0%
!! AATTTCAAAATTATTTCCAT+AGG - Chr5:14834631-14834650 None:intergenic 15.0%
!! ACGTTAAATATATAGTAATT+TGG - Chr5:14831586-14831605 None:intergenic 15.0%
!! AGCTAAAAAAATACAAATAA+GGG - Chr5:14832354-14832373 None:intergenic 15.0%
!! CGTTAAATATATAGTAATTT+GGG - Chr5:14831585-14831604 None:intergenic 15.0%
!! TAAAAAAATCCAATAATGAT+TGG - Chr5:14832621-14832640 None:intergenic 15.0%
!! TAATAAGTATGTAGTAATTT+CGG - Chr5:14831720-14831739 None:intergenic 15.0%
!! TCACTTAATTATTATTACTA+TGG + Chr5:14833526-14833545 MsG0580025183.01.T01:intron 15.0%
!!! AATAAGTATGTAGTAATTTT+GGG - Chr5:14831853-14831872 None:intergenic 15.0%
!!! ATCATTATTGGATTTTTTTA+AGG + Chr5:14832621-14832640 MsG0580025183.01.T01:intron 15.0%
!!! ATTTTAATATGAAACAAATC+AGG - Chr5:14834247-14834266 None:intergenic 15.0%
!!! TAATAAGTATGTAGTAATTT+TGG - Chr5:14831720-14831739 None:intergenic 15.0%
!!! TTTACTGTTTTATTAAAATG+AGG + Chr5:14831008-14831027 MsG0580025183.01.T01:intron 15.0%
!!! TTTTTTCTTCTAATTTCTTT+AGG + Chr5:14835371-14835390 MsG0580025183.01.T01:intron 15.0%
!! AAAAGACAAAATTACCAATA+AGG - Chr5:14832093-14832112 None:intergenic 20.0%
!! AAAATATCGCAATAATGTTA+TGG + Chr5:14836278-14836297 MsG0580025183.01.T01:CDS 20.0%
!! AAATTGTCTTCTATTCTTTA+GGG + Chr5:14834767-14834786 MsG0580025183.01.T01:intron 20.0%
!! AATAAGTATGTAGTAATTTC+GGG - Chr5:14831719-14831738 None:intergenic 20.0%
!! AATATAAATTACTCCAATGA+TGG - Chr5:14834580-14834599 None:intergenic 20.0%
!! ATACTCGGAAATATAAAAAT+TGG + Chr5:14834120-14834139 MsG0580025183.01.T01:CDS 20.0%
!! ATCAATCCAAATACTTTAAT+TGG - Chr5:14832835-14832854 None:intergenic 20.0%
!! CAAAATAATAATAAATTCGC+AGG - Chr5:14833343-14833362 None:intergenic 20.0%
!! CTATTATATGCATGAAAAAA+GGG - Chr5:14832926-14832945 None:intergenic 20.0%
!! GAATATTTCAACAAATTGAA+TGG - Chr5:14835775-14835794 None:intergenic 20.0%
!! GCAACATATTAAAATATCTA+AGG - Chr5:14835086-14835105 None:intergenic 20.0%
!! TAATTTAGTTAAAATGAGTC+TGG - Chr5:14831664-14831683 None:intergenic 20.0%
!! TACTATATATTTAACGTGTT+CGG + Chr5:14831589-14831608 MsG0580025183.01.T01:intron 20.0%
!! TCAATCCAAATACTTTAATT+GGG - Chr5:14832834-14832853 None:intergenic 20.0%
!! TGTTTCATATTAAAATGTGA+CGG + Chr5:14834251-14834270 MsG0580025183.01.T01:intron 20.0%
!! TTAAAGAGCTAAAACTAAAT+GGG - Chr5:14835407-14835426 None:intergenic 20.0%
!! TTACTACATACTTATTATGT+CGG + Chr5:14831723-14831742 MsG0580025183.01.T01:intron 20.0%
!! TTATGTTATTGTATGATACA+AGG + Chr5:14834484-14834503 MsG0580025183.01.T01:intron 20.0%
!! TTATTAAAATGAGGCAAAAT+TGG + Chr5:14831017-14831036 MsG0580025183.01.T01:intron 20.0%
!! TTGATATTATGGTGAATTTA+AGG + Chr5:14835486-14835505 MsG0580025183.01.T01:intron 20.0%
!! TTTAAAGAGCTAAAACTAAA+TGG - Chr5:14835408-14835427 None:intergenic 20.0%
!! TTTATATAGCTGCAAAAATT+GGG + Chr5:14833572-14833591 MsG0580025183.01.T01:intron 20.0%
!!! AAAATGTTTTATTGTGGATT+TGG + Chr5:14832881-14832900 MsG0580025183.01.T01:intron 20.0%
!!! AAATCCACAATAAAACATTT+TGG - Chr5:14832882-14832901 None:intergenic 20.0%
!!! ATATTAAAATATCTAAGGCA+TGG - Chr5:14835081-14835100 None:intergenic 20.0%
!!! CATAACAGATATTTTGTTAT+AGG - Chr5:14832037-14832056 None:intergenic 20.0%
!!! GATATTTTGAAATGTTTGTT+CGG - Chr5:14836266-14836285 None:intergenic 20.0%
!!! TAGATATTTTAATATGTTGC+AGG + Chr5:14835086-14835105 MsG0580025183.01.T01:intron 20.0%
!!! TATTTTAGTTAAAATGAGTC+TGG - Chr5:14831798-14831817 None:intergenic 20.0%
!!! TATTTTTATGTTATTGTGCA+GGG + Chr5:14836237-14836256 MsG0580025183.01.T01:intron 20.0%
!!! TTTCAATGAAAGTTTGTTAA+CGG - Chr5:14833890-14833909 None:intergenic 20.0%
!!! TTTCTTTTCTTGATAAAAGA+AGG + Chr5:14835434-14835453 MsG0580025183.01.T01:intron 20.0%
!!! TTTTATATAGCTGCAAAAAT+TGG + Chr5:14833571-14833590 MsG0580025183.01.T01:intron 20.0%
!!! TTTTTTTTGAGAGAAGTAAT+AGG + Chr5:14832562-14832581 MsG0580025183.01.T01:intron 20.0%
! AAAACATAAACGACACATAA+CGG - Chr5:14831823-14831842 None:intergenic 25.0%
! AACAAATTGAATGGTAGAAT+GGG - Chr5:14835766-14835785 None:intergenic 25.0%
! ACCTCTTGAGTAAAAAATAA+TGG + Chr5:14835659-14835678 MsG0580025183.01.T01:intron 25.0%
! ACTTACTATGCTATATGTAA+CGG - Chr5:14831995-14832014 None:intergenic 25.0%
! AGAATAGTTATGAAAACGAT+TGG + Chr5:14836113-14836132 MsG0580025183.01.T01:intron 25.0%
! AGTTGTTAGTAGATTAATTG+AGG + Chr5:14831319-14831338 MsG0580025183.01.T01:intron 25.0%
! ATAAATCCAATAGACACAAA+TGG + Chr5:14833107-14833126 MsG0580025183.01.T01:intron 25.0%
! ATAATATTTGTTCTCCTGAT+TGG + Chr5:14834843-14834862 MsG0580025183.01.T01:intron 25.0%
! ATACAACCTAATTACATTCA+TGG + Chr5:14832738-14832757 MsG0580025183.01.T01:intron 25.0%
! ATGATCGTATATGTTTGATT+TGG + Chr5:14834007-14834026 MsG0580025183.01.T01:intron 25.0%
! CAAATTGTCTTCTATTCTTT+AGG + Chr5:14834766-14834785 MsG0580025183.01.T01:intron 25.0%
! CATTGAAATGATAATAGTCA+TGG + Chr5:14833902-14833921 MsG0580025183.01.T01:intron 25.0%
! CCTCTTGAGTAAAAAATAAT+GGG + Chr5:14835660-14835679 MsG0580025183.01.T01:intron 25.0%
! GCTATTATATGCATGAAAAA+AGG - Chr5:14832927-14832946 None:intergenic 25.0%
! GGAAATATAAAAATTGGTGA+AGG + Chr5:14834126-14834145 MsG0580025183.01.T01:CDS 25.0%
! GTTGTTAGTAGATTAATTGA+GGG + Chr5:14831320-14831339 MsG0580025183.01.T01:intron 25.0%
! TAAGGACATGTTTGATATTA+TGG + Chr5:14835475-14835494 MsG0580025183.01.T01:intron 25.0%
! TAATATTTGTTCTCCTGATT+GGG + Chr5:14834844-14834863 MsG0580025183.01.T01:intron 25.0%
! TATAGTACCATAAGTGTTAT+AGG + Chr5:14832656-14832675 MsG0580025183.01.T01:intron 25.0%
! TGAATTTAAGGATATCATAG+TGG + Chr5:14835498-14835517 MsG0580025183.01.T01:intron 25.0%
! TGGTAAAAGGACAATTTATA+GGG + Chr5:14832488-14832507 MsG0580025183.01.T01:intron 25.0%
! TGTATTTCCTAACTAGAAAT+AGG - Chr5:14835834-14835853 None:intergenic 25.0%
! TTATATAGCTGCAAAAATTG+GGG + Chr5:14833573-14833592 MsG0580025183.01.T01:intron 25.0%
! TTGGTAAAAGGACAATTTAT+AGG + Chr5:14832487-14832506 MsG0580025183.01.T01:intron 25.0%
! TTGTTAGTAGATTAATTGAG+GGG + Chr5:14831321-14831340 MsG0580025183.01.T01:intron 25.0%
!! AAAAGAGCAACACAAAATTT+TGG + Chr5:14835631-14835650 MsG0580025183.01.T01:intron 25.0%
!! AGGGAATTTTATTAGATCAT+GGG + Chr5:14833596-14833615 MsG0580025183.01.T01:CDS 25.0%
!! AGTTTTTACTGTTTGGTAAA+AGG + Chr5:14832475-14832494 MsG0580025183.01.T01:intron 25.0%
!! ATTTTTATGTTATTGTGCAG+GGG + Chr5:14836238-14836257 MsG0580025183.01.T01:intron 25.0%
!! CAACTTTGTATTGATAACAA+AGG - Chr5:14835983-14836002 None:intergenic 25.0%
!! TATTGATTAATCTGCTTTGT+TGG + Chr5:14834728-14834747 MsG0580025183.01.T01:intron 25.0%
!! TCTTGTTTATGTTTGTAAAC+AGG + Chr5:14832166-14832185 MsG0580025183.01.T01:intron 25.0%
!! TGGTTGAACTTTACATTTTA+TGG + Chr5:14833546-14833565 MsG0580025183.01.T01:intron 25.0%
!! TGTTCTTGTTTCCATTATTA+GGG + Chr5:14832295-14832314 MsG0580025183.01.T01:intron 25.0%
!! TTGTTCTTGTTTCCATTATT+AGG + Chr5:14832294-14832313 MsG0580025183.01.T01:intron 25.0%
!!! ACAACCAAAATGTTTTATTG+TGG + Chr5:14832875-14832894 MsG0580025183.01.T01:intron 25.0%
!!! ATCATTAGTTTGATTTGAGT+TGG + Chr5:14831287-14831306 MsG0580025183.01.T01:intron 25.0%
!!! ATTTTAATGCATCTTTGGAT+TGG - Chr5:14835601-14835620 None:intergenic 25.0%
!!! ATTTTTTACTCAAGAGGTAA+AGG - Chr5:14835657-14835676 None:intergenic 25.0%
!!! GCTTTTTTAAAAACAAAACC+TGG + Chr5:14835887-14835906 MsG0580025183.01.T01:intron 25.0%
!!! GTATTTTTATGTTATTGTGC+AGG + Chr5:14836236-14836255 MsG0580025183.01.T01:intron 25.0%
!!! TTATTTTGAATAACGGAGAA+TGG + Chr5:14833355-14833374 MsG0580025183.01.T01:intron 25.0%
!!! TTTAGTTCTGAAAGTAACAA+TGG - Chr5:14831262-14831281 None:intergenic 25.0%
AACAACACCTATAACACTTA+TGG - Chr5:14832666-14832685 None:intergenic 30.0%
AACATTGCTCCAATCATTAT+TGG + Chr5:14832609-14832628 MsG0580025183.01.T01:intron 30.0%
AAGAAAAGAAAACTAACCAC+TGG - Chr5:14834927-14834946 None:intergenic 30.0%
AAGTATGATAACAACTTACC+AGG - Chr5:14833211-14833230 None:intergenic 30.0%
AATAATGATTGGAGCAATGT+TGG - Chr5:14832610-14832629 None:intergenic 30.0%
AATAGTGAGCACACTAAATT+TGG - Chr5:14832524-14832543 None:intergenic 30.0%
AATCAATATGTCATACAGAC+CGG - Chr5:14834716-14834735 None:intergenic 30.0%
ACAAATTGAATGGTAGAATG+GGG - Chr5:14835765-14835784 None:intergenic 30.0%
ACAACTCCATGAATGTAATT+AGG - Chr5:14832747-14832766 None:intergenic 30.0%
ACTAATTAAATCCGTTACGT+CGG + Chr5:14831921-14831940 MsG0580025183.01.T01:intron 30.0%
ACTACAGAAATTACCTATAC+TGG - Chr5:14835319-14835338 None:intergenic 30.0%
AGTATAGGTAATTTCTGTAG+TGG + Chr5:14835318-14835337 MsG0580025183.01.T01:intron 30.0%
ATATAATAGCTTCATAGGAC+TGG + Chr5:14832937-14832956 MsG0580025183.01.T01:intron 30.0%
ATCAGTTCAAAACAATGTAG+TGG + Chr5:14835222-14835241 MsG0580025183.01.T01:intron 30.0%
ATGTTCCATAAGTTAGACTT+TGG + Chr5:14835925-14835944 MsG0580025183.01.T01:intron 30.0%
CAACAAATTGAATGGTAGAA+TGG - Chr5:14835767-14835786 None:intergenic 30.0%
CAATAATGTTATGGTGTCTA+TGG + Chr5:14836287-14836306 MsG0580025183.01.T01:CDS 30.0%
CATAACTATTCTTGCAATGA+GGG - Chr5:14836105-14836124 None:intergenic 30.0%
CATGCATATAATAGCTTCAT+AGG + Chr5:14832932-14832951 MsG0580025183.01.T01:intron 30.0%
CTCATAAATACTAGTTGTAG+TGG - Chr5:14834986-14835005 None:intergenic 30.0%
CTTCTAATTTCTTTAGGTGA+AGG + Chr5:14835377-14835396 MsG0580025183.01.T01:intron 30.0%
GATCTCATATATCAATGTAG+TGG + Chr5:14835340-14835359 MsG0580025183.01.T01:intron 30.0%
GATTCACATTAATCCATCAT+TGG + Chr5:14834564-14834583 MsG0580025183.01.T01:intron 30.0%
TACTTCCAAAGTCTAACTTA+TGG - Chr5:14835933-14835952 None:intergenic 30.0%
TAGATTTGGCAAAATCACAA+TGG + Chr5:14835550-14835569 MsG0580025183.01.T01:intron 30.0%
TCATAACTATTCTTGCAATG+AGG - Chr5:14836106-14836125 None:intergenic 30.0%
TGAAATCCATTTGTGTCTAT+TGG - Chr5:14833116-14833135 None:intergenic 30.0%
TGAAGATATTGAAAGCTCTT+TGG + Chr5:14833489-14833508 MsG0580025183.01.T01:intron 30.0%
TGTAATAGTAAAACAAGTGG+TGG - Chr5:14830703-14830722 None:intergenic 30.0%
TGTCCCTTATTAATTTCCAA+AGG - Chr5:14836189-14836208 None:intergenic 30.0%
TGTTATTGTATGATACAAGG+AGG + Chr5:14834487-14834506 MsG0580025183.01.T01:intron 30.0%
TTCGAACTTCAACAAAATCA+TGG - Chr5:14835526-14835545 None:intergenic 30.0%
TTTAGTTAAAATGAGTCTGG+CGG - Chr5:14831661-14831680 None:intergenic 30.0%
! ACTCAGCTATGTTTCATTTT+TGG - Chr5:14834682-14834701 None:intergenic 30.0%
! AGGAATGCATCACTAAATTT+TGG + Chr5:14835705-14835724 MsG0580025183.01.T01:intron 30.0%
! AGTCTTTTATCCCCTAATAA+TGG - Chr5:14832309-14832328 None:intergenic 30.0%
! AGTTTTTCCTGTTTATGCTA+TGG + Chr5:14830877-14830896 MsG0580025183.01.T01:exon 30.0%
! ATTTTATTAGATCATGGGAC+AGG + Chr5:14833601-14833620 MsG0580025183.01.T01:CDS 30.0%
! CTCAGAAAGTTTTTACTGTT+TGG + Chr5:14832468-14832487 MsG0580025183.01.T01:intron 30.0%
! CTCAGCAATTTTGTATATGA+AGG + Chr5:14832226-14832245 MsG0580025183.01.T01:intron 30.0%
! GAGGGAATTTTATTAGATCA+TGG + Chr5:14833595-14833614 MsG0580025183.01.T01:CDS 30.0%
! GTCGCATATATCTTTGTTTA+CGG - Chr5:14836048-14836067 None:intergenic 30.0%
! GTTCTTGTTTCCATTATTAG+GGG + Chr5:14832296-14832315 MsG0580025183.01.T01:intron 30.0%
! GTTTTTCCTGTTTATGCTAT+GGG + Chr5:14830878-14830897 MsG0580025183.01.T01:exon 30.0%
! TAACTATTTTCCTCTTATGC+AGG - Chr5:14833803-14833822 None:intergenic 30.0%
! TGGCCTTTGGAAATTAATAA+GGG + Chr5:14836183-14836202 MsG0580025183.01.T01:intron 30.0%
! TTGCACCCAATTAAAGTATT+TGG + Chr5:14832826-14832845 MsG0580025183.01.T01:intron 30.0%
!! CGCTAATTTGTAGTTTTTGA+CGG + Chr5:14834419-14834438 MsG0580025183.01.T01:intron 30.0%
!! TTTCATGCCTATTTCTAGTT+AGG + Chr5:14835824-14835843 MsG0580025183.01.T01:intron 30.0%
!! TTTTAAAAGCCACTAAGCTA+AGG + Chr5:14835457-14835476 MsG0580025183.01.T01:intron 30.0%
!!! ATCTGCTTTGTTGGTTTTTA+CGG + Chr5:14834737-14834756 MsG0580025183.01.T01:intron 30.0%
!!! CCCATTATTTTTTACTCAAG+AGG - Chr5:14835663-14835682 None:intergenic 30.0%
!!! CTTGCGTTTTGAAATTCTTA+TGG + Chr5:14834450-14834469 MsG0580025183.01.T01:intron 30.0%
!!! GCAGTATTTTAATGCATCTT+TGG - Chr5:14835606-14835625 None:intergenic 30.0%
AACGATTGGCACTTGTTTAT+AGG + Chr5:14836127-14836146 MsG0580025183.01.T01:intron 35.0%
AAGACGATAAGAAAAGAGAG+AGG - Chr5:14830852-14830871 None:intergenic 35.0%
AAGAGTAACTGTAACTGAAG+TGG - Chr5:14830744-14830763 None:intergenic 35.0%
AAGATATTCATCGATACCTG+CGG - Chr5:14834197-14834216 None:intergenic 35.0%
AAGGTGATATGAAAGAAGTG+CGG + Chr5:14836335-14836354 MsG0580025183.01.T01:CDS 35.0%
AATGCTCAAATTCTTGTTGG+AGG + Chr5:14835685-14835704 MsG0580025183.01.T01:intron 35.0%
AGAAAGTGATGCTATGAATG+TGG - Chr5:14832431-14832450 None:intergenic 35.0%
AGACGATAAGAAAAGAGAGA+GGG - Chr5:14830851-14830870 None:intergenic 35.0%
AGAGCTTTCAATATCTTCAG+TGG - Chr5:14833488-14833507 None:intergenic 35.0%
ATAGTGACTCAGACATGTAT+TGG - Chr5:14834606-14834625 None:intergenic 35.0%
ATCATATCTTACCGACGTAA+CGG - Chr5:14831935-14831954 None:intergenic 35.0%
ATTCATTTCTGCAGACAACT+TGG + Chr5:14835791-14835810 MsG0580025183.01.T01:intron 35.0%
ATTGGTGAAACTGCTGTTAT+TGG + Chr5:14833631-14833650 MsG0580025183.01.T01:CDS 35.0%
ATTGTCAATACGATTCTGCT+AGG - Chr5:14834799-14834818 None:intergenic 35.0%
CAGCAGAAACTATAGACTAT+AGG + Chr5:14834542-14834561 MsG0580025183.01.T01:intron 35.0%
CATGTCTCATGGTTAAAGAT+GGG - Chr5:14834361-14834380 None:intergenic 35.0%
GGGTGTAATAGTAAAACAAG+TGG - Chr5:14830706-14830725 None:intergenic 35.0%
GTAAACAGGCATTTAAAGAC+CGG + Chr5:14832180-14832199 MsG0580025183.01.T01:intron 35.0%
GTAGCTACATGAGAGAAAAA+TGG - Chr5:14834884-14834903 None:intergenic 35.0%
GTGAATGCTCAAATTCTTGT+TGG + Chr5:14835682-14835701 MsG0580025183.01.T01:intron 35.0%
TAAACAGGCATTTAAAGACC+GGG + Chr5:14832181-14832200 MsG0580025183.01.T01:intron 35.0%
TACAGAAAGCTACTCAAAAC+TGG - Chr5:14831385-14831404 None:intergenic 35.0%
TATATGCGACTCCAAGATAA+TGG + Chr5:14836058-14836077 MsG0580025183.01.T01:intron 35.0%
TCAATTCCAAAAACCTGTGA+AGG - Chr5:14833181-14833200 None:intergenic 35.0%
TGAAGGTCTACTTTCTGATT+TGG + Chr5:14832243-14832262 MsG0580025183.01.T01:intron 35.0%
TGTCGAATTCAAGACCTTAT+TGG + Chr5:14832076-14832095 MsG0580025183.01.T01:intron 35.0%
TTGTCAATACGATTCTGCTA+GGG - Chr5:14834798-14834817 None:intergenic 35.0%
TTTAGAGATGAAAAGTCCAG+TGG + Chr5:14834908-14834927 MsG0580025183.01.T01:CDS 35.0%
TTTCTTATTAAGCACTCGCA+TGG + Chr5:14830767-14830786 MsG0580025183.01.T01:five_prime_UTR 35.0%
TTTGGATCGATTGTCTTCAA+AGG + Chr5:14835166-14835185 MsG0580025183.01.T01:intron 35.0%
! AAAGAGTAGGACTTTGAAGA+CGG - Chr5:14831465-14831484 None:intergenic 35.0%
! AGATTGAGTGTTGTCTTGAA+GGG + Chr5:14833451-14833470 MsG0580025183.01.T01:intron 35.0%
! AGGAACAATAAAGTGTCAGA+AGG + Chr5:14836316-14836335 MsG0580025183.01.T01:CDS 35.0%
! CTGGCCTTTGGAAATTAATA+AGG + Chr5:14836182-14836201 MsG0580025183.01.T01:intron 35.0%
! CTTTCTGTATGCAAGTGTTT+TGG + Chr5:14831396-14831415 MsG0580025183.01.T01:CDS 35.0%
! GAAGTTCGAAAGTGTAGATT+TGG + Chr5:14835536-14835555 MsG0580025183.01.T01:intron 35.0%
! TAGCTTTTGCAAAATCACAG+TGG + Chr5:14831045-14831064 MsG0580025183.01.T01:intron 35.0%
! TCTTCAAAGTCCTACTCTTT+TGG + Chr5:14831465-14831484 MsG0580025183.01.T01:CDS 35.0%
! TTTGGAATTGACATTCATCC+TGG + Chr5:14833190-14833209 MsG0580025183.01.T01:CDS 35.0%
!! CAGCTATGTTTCATTTTTGG+TGG - Chr5:14834679-14834698 None:intergenic 35.0%
!! GAAGCAGAAGGTATTCTTAA+GGG + Chr5:14833385-14833404 MsG0580025183.01.T01:intron 35.0%
!! GTTTTGAGTAGTGGTGTTTT+TGG - Chr5:14830636-14830655 None:intergenic 35.0%
!! TCGTATATGTTTGATTTGGC+AGG + Chr5:14834011-14834030 MsG0580025183.01.T01:intron 35.0%
!! TGAAGCAGAAGGTATTCTTA+AGG + Chr5:14833384-14833403 MsG0580025183.01.T01:intron 35.0%
!! TGCTTTGTCTTAAAGCATTG+TGG + Chr5:14834292-14834311 MsG0580025183.01.T01:intron 35.0%
!! TTTGTCTTAAAGCATTGTGG+CGG + Chr5:14834295-14834314 MsG0580025183.01.T01:intron 35.0%
!!! AATTTTGACTCCTGCATAAG+AGG + Chr5:14833790-14833809 MsG0580025183.01.T01:intron 35.0%
!!! CTTTGCTTTGTTTTGAGTAG+TGG - Chr5:14830645-14830664 None:intergenic 35.0%
AAAAGTTATTGGAGGTCTCC+GGG + Chr5:14834328-14834347 MsG0580025183.01.T01:CDS 40.0%
AAACGAAACGAACGCTTGAA+AGG + Chr5:14835127-14835146 MsG0580025183.01.T01:intron 40.0%
AAACGAACGCTTGAAAGGTT+TGG + Chr5:14835132-14835151 MsG0580025183.01.T01:intron 40.0%
AACCAAGTTTGGTAAGTTGC+TGG + Chr5:14836163-14836182 MsG0580025183.01.T01:intron 40.0%
AAGTGATGCTATGAATGTGG+CGG - Chr5:14832428-14832447 None:intergenic 40.0%
AATGGTATCAGTGAAGCAGA+AGG + Chr5:14833373-14833392 MsG0580025183.01.T01:intron 40.0%
ACTGTAACTGAAGTGGTGTA+TGG - Chr5:14830737-14830756 None:intergenic 40.0%
AGATATTCATCGATACCTGC+GGG - Chr5:14834196-14834215 None:intergenic 40.0%
AGCAACTTACCAAACTTGGT+TGG - Chr5:14836164-14836183 None:intergenic 40.0%
AGCAATATGACAGACATGCA+GGG - Chr5:14832208-14832227 None:intergenic 40.0%
AGCTGAGTCACTTAGAATAC+CGG + Chr5:14834694-14834713 MsG0580025183.01.T01:intron 40.0%
AGTGTGCTCACTATTGTAAC+AGG + Chr5:14832529-14832548 MsG0580025183.01.T01:intron 40.0%
ATACCGGCAAAAGTTATTGG+AGG + Chr5:14834320-14834339 MsG0580025183.01.T01:CDS 40.0%
ATAGCTGCAAAAATTGGGGA+GGG + Chr5:14833577-14833596 MsG0580025183.01.T01:intron 40.0%
CAAAAGTCAGTAGCATCTGA+TGG - Chr5:14832809-14832828 None:intergenic 40.0%
CAAAAGTTATTGGAGGTCTC+CGG + Chr5:14834327-14834346 MsG0580025183.01.T01:CDS 40.0%
CAAACATGTCCTTAGCTTAG+TGG - Chr5:14835469-14835488 None:intergenic 40.0%
CAGGAACTGTTACTGTTGTT+GGG - Chr5:14830603-14830622 None:intergenic 40.0%
CATCAATTCACACATGTTCC+AGG - Chr5:14835908-14835927 None:intergenic 40.0%
CCATCTTTAACCATGAGACA+TGG + Chr5:14834359-14834378 MsG0580025183.01.T01:CDS 40.0%
CCATGTCTCATGGTTAAAGA+TGG - Chr5:14834362-14834381 None:intergenic 40.0%
CTCGATAAGTTTGCAGAGAA+TGG - Chr5:14832994-14833013 None:intergenic 40.0%
CTGTTACTGTTGTTGGGAAA+TGG - Chr5:14830597-14830616 None:intergenic 40.0%
CTTGTGTGAGTCATCACAAT+TGG + Chr5:14830790-14830809 MsG0580025183.01.T01:five_prime_UTR 40.0%
GAGCACACTAAATTTGGTAG+TGG - Chr5:14832518-14832537 None:intergenic 40.0%
GATCCTGAATCCATCTTAGA+CGG + Chr5:14830914-14830933 MsG0580025183.01.T01:CDS 40.0%
GATCGATTGTCTTCAAAGGA+AGG + Chr5:14835170-14835189 MsG0580025183.01.T01:intron 40.0%
GCTAGCACCACAAGTTTATA+GGG + Chr5:14832400-14832419 MsG0580025183.01.T01:intron 40.0%
GCTTAACAGCTTCCCAAATA+GGG - Chr5:14830946-14830965 None:intergenic 40.0%
GGAATACCGGCAAAAGTTAT+TGG + Chr5:14834317-14834336 MsG0580025183.01.T01:CDS 40.0%
GGTAAACCCATAGCATAAAC+AGG - Chr5:14830887-14830906 None:intergenic 40.0%
TAAGCAAGAAGCTAAGCTTG+AGG + Chr5:14830961-14830980 MsG0580025183.01.T01:CDS 40.0%
TACACGGTACTCCATTATCT+TGG - Chr5:14836072-14836091 None:intergenic 40.0%
TATAGCTGCAAAAATTGGGG+AGG + Chr5:14833576-14833595 MsG0580025183.01.T01:intron 40.0%
TCCAAAAACCTGTGAAGGAA+AGG - Chr5:14833176-14833195 None:intergenic 40.0%
TCTGAGAAGAAAAGATGCAG+TGG - Chr5:14832454-14832473 None:intergenic 40.0%
TGCTAGCACCACAAGTTTAT+AGG + Chr5:14832399-14832418 MsG0580025183.01.T01:intron 40.0%
TGCTTAACAGCTTCCCAAAT+AGG - Chr5:14830947-14830966 None:intergenic 40.0%
TGTGATAAGAACACCAGTTG+AGG - Chr5:14835021-14835040 None:intergenic 40.0%
TTACTGTTGTTGGGAAATGG+TGG - Chr5:14830594-14830613 None:intergenic 40.0%
TTGAAATCACCTGAACATCG+AGG - Chr5:14831558-14831577 None:intergenic 40.0%
TTGGCTTAATCTCTCCAACA+TGG + Chr5:14830809-14830828 MsG0580025183.01.T01:five_prime_UTR 40.0%
! AGACCTCCAATAACTTTTGC+CGG - Chr5:14834326-14834345 None:intergenic 40.0%
! CAGATTGAGTGTTGTCTTGA+AGG + Chr5:14833450-14833469 MsG0580025183.01.T01:intron 40.0%
! GGTTTGGTTGCTTTGATCTT+TGG + Chr5:14835148-14835167 MsG0580025183.01.T01:intron 40.0%
! GTAGCTTTTGCAAAATCACG+TGG + Chr5:14831125-14831144 MsG0580025183.01.T01:intron 40.0%
! TCCTTTCCTTCACAGGTTTT+TGG + Chr5:14833172-14833191 MsG0580025183.01.T01:intron 40.0%
! TCTAAGATGGATTCAGGATC+CGG - Chr5:14830914-14830933 None:intergenic 40.0%
! TGGCATTCGATGTTGTGTTT+TGG + Chr5:14832957-14832976 MsG0580025183.01.T01:intron 40.0%
!! AGATAATGGAGTACCGTGTA+CGG + Chr5:14836072-14836091 MsG0580025183.01.T01:intron 40.0%
!! AGGGGCATCATTTAACACAA+GGG - Chr5:14834172-14834191 None:intergenic 40.0%
!! AGGGGTGTTGTGTTGAATTT+GGG + Chr5:14831339-14831358 MsG0580025183.01.T01:intron 40.0%
!! CACACTAAATTTGGTAGTGG+TGG - Chr5:14832515-14832534 None:intergenic 40.0%
!! GGATTGAAAGTGTTTGCTGA+TGG + Chr5:14832129-14832148 MsG0580025183.01.T01:intron 40.0%
!! TCTTTTGGCTACACAGCTTA+TGG + Chr5:14831480-14831499 MsG0580025183.01.T01:CDS 40.0%
!! TGAAGTGGTGTATGGTTTTG+AGG - Chr5:14830729-14830748 None:intergenic 40.0%
!! TTGTCTTAAAGCATTGTGGC+GGG + Chr5:14834296-14834315 MsG0580025183.01.T01:intron 40.0%
!!! AAGTGGTGTATGGTTTTGAG+GGG - Chr5:14830727-14830746 None:intergenic 40.0%
!!! GAAGTGGTGTATGGTTTTGA+GGG - Chr5:14830728-14830747 None:intergenic 40.0%
!!! GATGTTGTGTTTTGGCAACA+GGG + Chr5:14832965-14832984 MsG0580025183.01.T01:intron 40.0%
!!! TGTTTTGGCACATGAGTGTT+TGG + Chr5:14831411-14831430 MsG0580025183.01.T01:CDS 40.0%
AAATCACCTGAACATCGAGG+CGG - Chr5:14831555-14831574 None:intergenic 45.0%
AACCTGTGAAGGAAAGGACA+AGG - Chr5:14833170-14833189 None:intergenic 45.0%
ACCTGTGAAGGAAAGGACAA+GGG - Chr5:14833169-14833188 None:intergenic 45.0%
AGCTGTGTAGCCAAAAGAGT+AGG - Chr5:14831478-14831497 None:intergenic 45.0%
AGTAAGCTACCTCGCTAACA+CGG - Chr5:14833072-14833091 None:intergenic 45.0%
AGTGATGCTATGAATGTGGC+GGG - Chr5:14832427-14832446 None:intergenic 45.0%
ATTTGGCAGGCTGTGACATT+AGG + Chr5:14834024-14834043 MsG0580025183.01.T01:intron 45.0%
CACGGGGATAAGGAAAAAAG+TGG - Chr5:14830555-14830574 None:intergenic 45.0%
GAGCAATATGACAGACATGC+AGG - Chr5:14832209-14832228 None:intergenic 45.0%
GATATTCATCGATACCTGCG+GGG - Chr5:14834195-14834214 None:intergenic 45.0%
GCAGGAACTGTTACTGTTGT+TGG - Chr5:14830604-14830623 None:intergenic 45.0%
GTCTGAGTCACTATAGCCTA+TGG + Chr5:14834612-14834631 MsG0580025183.01.T01:intron 45.0%
TCATGGAGTTGTGACGTTGA+GGG + Chr5:14832755-14832774 MsG0580025183.01.T01:intron 45.0%
TGAGGTTCTTGCACCAGTAT+AGG + Chr5:14835303-14835322 MsG0580025183.01.T01:intron 45.0%
TGCAAAATCACAGTGGCTCA+TGG + Chr5:14831052-14831071 MsG0580025183.01.T01:intron 45.0%
TTAAAGATGGGTCATGCTCC+CGG - Chr5:14834349-14834368 None:intergenic 45.0%
TTCATGGAGTTGTGACGTTG+AGG + Chr5:14832754-14832773 MsG0580025183.01.T01:intron 45.0%
TTTGTAGCATCTGCCCAATC+AGG - Chr5:14834860-14834879 None:intergenic 45.0%
! CTAAGATGGATTCAGGATCC+GGG - Chr5:14830913-14830932 None:intergenic 45.0%
! GGAGCTGGTTCAACTATACT+CGG + Chr5:14834105-14834124 MsG0580025183.01.T01:CDS 45.0%
! GGTGTTGTGTTGAATTTGGG+AGG + Chr5:14831342-14831361 MsG0580025183.01.T01:intron 45.0%
! GGTTTGCTTACCATGTCTCA+TGG - Chr5:14834372-14834391 None:intergenic 45.0%
! GTGCATTTTCAGTCCTCAAC+TGG + Chr5:14835005-14835024 MsG0580025183.01.T01:intron 45.0%
! GTGTTGAATTTGGGAGGTAC+AGG + Chr5:14831348-14831367 MsG0580025183.01.T01:intron 45.0%
! GTTGGGAAATGGTGGTGTTT+CGG - Chr5:14830586-14830605 None:intergenic 45.0%
! TTGGGAAATGGTGGTGTTTC+GGG - Chr5:14830585-14830604 None:intergenic 45.0%
!! GAGGGGCATCATTTAACACA+AGG - Chr5:14834173-14834192 None:intergenic 45.0%
!! GAGGGGTGTTGTGTTGAATT+TGG + Chr5:14831338-14831357 MsG0580025183.01.T01:intron 45.0%
!! TTTGGTAAGTTGCTGGCCTT+TGG + Chr5:14836170-14836189 MsG0580025183.01.T01:intron 45.0%
!!! AGTGGTGTATGGTTTTGAGG+GGG - Chr5:14830726-14830745 None:intergenic 45.0%
!!! CGATGTTGTGTTTTGGCAAC+AGG + Chr5:14832964-14832983 MsG0580025183.01.T01:intron 45.0%
!!! TGTTTTTGGCACATCATCGC+AGG - Chr5:14830622-14830641 None:intergenic 45.0%
!!! CTTTTAATTTAATTTTATAT+TGG + Chr5:14832108-14832127 MsG0580025183.01.T01:intron 5.0%
!!! TTTATTATTATTTTGAATAA+CGG + Chr5:14833348-14833367 MsG0580025183.01.T01:intron 5.0%
AACACGGCTTTGCAAAGCCA+AGG - Chr5:14833056-14833075 None:intergenic 50.0%
AGTGCCCCTTCACCTACTTT+GGG - Chr5:14834081-14834100 None:intergenic 50.0%
ATCAATCCGCCTCGATGTTC+AGG + Chr5:14831546-14831565 MsG0580025183.01.T01:CDS 50.0%
ATCGAGTAGCGCATGCATTG+TGG + Chr5:14833008-14833027 MsG0580025183.01.T01:CDS 50.0%
CATGGGACAGGCGTGATTAT+TGG + Chr5:14833613-14833632 MsG0580025183.01.T01:CDS 50.0%
CCATCCCAAAGTAGGTGAAG+GGG + Chr5:14834074-14834093 MsG0580025183.01.T01:CDS 50.0%
CCTGTGAAGGAAAGGACAAG+GGG - Chr5:14833168-14833187 None:intergenic 50.0%
CGATGATGTGGCATGCTCAA+AGG - Chr5:14834393-14834412 None:intergenic 50.0%
GCCATCCCAAAGTAGGTGAA+GGG + Chr5:14834073-14834092 MsG0580025183.01.T01:CDS 50.0%
GCGTTTCTCAGAGACCATGT+TGG - Chr5:14830826-14830845 None:intergenic 50.0%
GGCCAGCAACTTACCAAACT+TGG - Chr5:14836168-14836187 None:intergenic 50.0%
TGCTATGGGTTTACCTGACC+CGG + Chr5:14830892-14830911 MsG0580025183.01.T01:exon 50.0%
TTAGCGTAGTCGCGATGATG+TGG - Chr5:14834405-14834424 None:intergenic 50.0%
TTTGCAAAGCCGTGTTAGCG+AGG + Chr5:14833060-14833079 MsG0580025183.01.T01:CDS 50.0%
! AAGCATTGTGGCGGGAATAC+CGG + Chr5:14834304-14834323 MsG0580025183.01.T01:intron 50.0%
! AGACGGCTCTGACCCTATTT+GGG + Chr5:14830931-14830950 MsG0580025183.01.T01:CDS 50.0%
! GAAGGTGTGATGATTGCTGC+TGG + Chr5:14834144-14834163 MsG0580025183.01.T01:CDS 50.0%
! GAGCCGTCTAAGATGGATTC+AGG - Chr5:14830920-14830939 None:intergenic 50.0%
! TAGACGGCTCTGACCCTATT+TGG + Chr5:14830930-14830949 MsG0580025183.01.T01:CDS 50.0%
! TATGGTGTCTATGGCGTCGA+AGG + Chr5:14836296-14836315 MsG0580025183.01.T01:CDS 50.0%
ACTGGTGCAAGAACCTCAGC+AGG - Chr5:14835301-14835320 None:intergenic 55.0%
AGGGTCAGAGCCGTCTAAGA+TGG - Chr5:14830927-14830946 None:intergenic 55.0%
ATGACAGACATGCAGGGTCC+CGG - Chr5:14832202-14832221 None:intergenic 55.0%
ATGGATTCAGGATCCGGGTC+AGG - Chr5:14830908-14830927 None:intergenic 55.0%
ATTCATCGATACCTGCGGGG+AGG - Chr5:14834192-14834211 None:intergenic 55.0%
CAGTGCCCCTTCACCTACTT+TGG - Chr5:14834082-14834101 None:intergenic 55.0%
CCCCTTGTCCTTTCCTTCAC+AGG + Chr5:14833165-14833184 MsG0580025183.01.T01:intron 55.0%
CGCCATCCCAAAGTAGGTGA+AGG + Chr5:14834072-14834091 MsG0580025183.01.T01:CDS 55.0%
CGCGCGACATGTTGAACCAA+TGG + Chr5:14836374-14836393 MsG0580025183.01.T01:CDS 55.0%
GCGAAGCTGCCAACCAAGTT+TGG + Chr5:14836152-14836171 MsG0580025183.01.T01:CDS 55.0%
GGCGGGTCCCTATAAACTTG+TGG - Chr5:14832410-14832429 None:intergenic 55.0%
GGCTGTGACATTAGGAGGCA+CGG + Chr5:14834032-14834051 MsG0580025183.01.T01:intron 55.0%
GGTGATCGCCATCCCAAAGT+AGG + Chr5:14834066-14834085 MsG0580025183.01.T01:CDS 55.0%
TGAGGGCAGCAATCCGTACA+CGG - Chr5:14836088-14836107 None:intergenic 55.0%
TGGCAGGCTGTGACATTAGG+AGG + Chr5:14834027-14834046 MsG0580025183.01.T01:intron 55.0%
TTCATCGATACCTGCGGGGA+GGG - Chr5:14834191-14834210 None:intergenic 55.0%
! CCCCTTCACCTACTTTGGGA+TGG - Chr5:14834077-14834096 None:intergenic 55.0%
! CTGTGACATTAGGAGGCACG+GGG + Chr5:14834034-14834053 MsG0580025183.01.T01:CDS 55.0%
! GCTGTGACATTAGGAGGCAC+GGG + Chr5:14834033-14834052 MsG0580025183.01.T01:CDS 55.0%
! TTGGGAGGTACAGGCAGAGA+AGG + Chr5:14831357-14831376 MsG0580025183.01.T01:intron 55.0%
!! GGTGTTTCGGGTTACACGCA+CGG - Chr5:14830573-14830592 None:intergenic 55.0%
!! GTAGGTGAAGGGGCACTGAT+TGG + Chr5:14834084-14834103 MsG0580025183.01.T01:CDS 55.0%
!! GTGTTTCGGGTTACACGCAC+GGG - Chr5:14830572-14830591 None:intergenic 55.0%
!! TGTTTCGGGTTACACGCACG+GGG - Chr5:14830571-14830590 None:intergenic 55.0%
AGCGCATGCATTGTGGCACC+AGG + Chr5:14833015-14833034 MsG0580025183.01.T01:CDS 60.0%
AGGCCAAGACTTTGCGTCCC+TGG - Chr5:14833036-14833055 None:intergenic 60.0%
GCACCAGGGACGCAAAGTCT+TGG + Chr5:14833030-14833049 MsG0580025183.01.T01:CDS 60.0%
GCGCATGCATTGTGGCACCA+GGG + Chr5:14833016-14833035 MsG0580025183.01.T01:CDS 60.0%
GGGACGCAAAGTCTTGGCCT+TGG + Chr5:14833036-14833055 MsG0580025183.01.T01:CDS 60.0%
GGGTTACACGCACGGGGATA+AGG - Chr5:14830565-14830584 None:intergenic 60.0%
TAAATGATGCCCCTCCCCGC+AGG + Chr5:14834178-14834197 MsG0580025183.01.T01:CDS 60.0%
TCATCGATACCTGCGGGGAG+GGG - Chr5:14834190-14834209 None:intergenic 60.0%
TTGCTGCTGAGTGCCTGCTG+AGG + Chr5:14835285-14835304 MsG0580025183.01.T01:intron 60.0%
! GACATTAGGAGGCACGGGGA+AGG + Chr5:14834038-14834057 MsG0580025183.01.T01:CDS 60.0%
!! GAAGGGGCACTGATTGGAGC+TGG + Chr5:14834090-14834109 MsG0580025183.01.T01:CDS 60.0%
! GGAGGCACGGGGAAGGAAAC+AGG + Chr5:14834045-14834064 MsG0580025183.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr5 gene 14830528 14836399 14830528 ID=MsG0580025183.01;Name=MsG0580025183.01
Chr5 mRNA 14830528 14836399 14830528 ID=MsG0580025183.01.T01;Parent=MsG0580025183.01;Name=MsG0580025183.01.T01;_AED=0.48;_eAED=0.48;_QI=368|0.66|0.8|1|1|1|10|0|322
Chr5 exon 14830528 14830982 14830528 ID=MsG0580025183.01.T01:exon:5918;Parent=MsG0580025183.01.T01
Chr5 exon 14831370 14831567 14831370 ID=MsG0580025183.01.T01:exon:5919;Parent=MsG0580025183.01.T01
Chr5 exon 14832986 14833081 14832986 ID=MsG0580025183.01.T01:exon:5920;Parent=MsG0580025183.01.T01
Chr5 exon 14833187 14833211 14833187 ID=MsG0580025183.01.T01:exon:5921;Parent=MsG0580025183.01.T01
Chr5 exon 14833581 14833675 14833581 ID=MsG0580025183.01.T01:exon:5922;Parent=MsG0580025183.01.T01
Chr5 exon 14834033 14834199 14834033 ID=MsG0580025183.01.T01:exon:5923;Parent=MsG0580025183.01.T01
Chr5 exon 14834307 14834380 14834307 ID=MsG0580025183.01.T01:exon:5924;Parent=MsG0580025183.01.T01
Chr5 exon 14834870 14834929 14834870 ID=MsG0580025183.01.T01:exon:5925;Parent=MsG0580025183.01.T01
Chr5 exon 14836149 14836173 14836149 ID=MsG0580025183.01.T01:exon:5926;Parent=MsG0580025183.01.T01
Chr5 exon 14836258 14836399 14836258 ID=MsG0580025183.01.T01:exon:5927;Parent=MsG0580025183.01.T01
Chr5 five_prime_UTR 14830528 14830895 14830528 ID=MsG0580025183.01.T01:five_prime_utr;Parent=MsG0580025183.01.T01
Chr5 CDS 14830896 14830982 14830896 ID=MsG0580025183.01.T01:cds;Parent=MsG0580025183.01.T01
Chr5 CDS 14831370 14831567 14831370 ID=MsG0580025183.01.T01:cds;Parent=MsG0580025183.01.T01
Chr5 CDS 14832986 14833081 14832986 ID=MsG0580025183.01.T01:cds;Parent=MsG0580025183.01.T01
Chr5 CDS 14833187 14833211 14833187 ID=MsG0580025183.01.T01:cds;Parent=MsG0580025183.01.T01
Chr5 CDS 14833581 14833675 14833581 ID=MsG0580025183.01.T01:cds;Parent=MsG0580025183.01.T01
Chr5 CDS 14834033 14834199 14834033 ID=MsG0580025183.01.T01:cds;Parent=MsG0580025183.01.T01
Chr5 CDS 14834307 14834380 14834307 ID=MsG0580025183.01.T01:cds;Parent=MsG0580025183.01.T01
Chr5 CDS 14834870 14834929 14834870 ID=MsG0580025183.01.T01:cds;Parent=MsG0580025183.01.T01
Chr5 CDS 14836149 14836173 14836149 ID=MsG0580025183.01.T01:cds;Parent=MsG0580025183.01.T01
Chr5 CDS 14836258 14836399 14836258 ID=MsG0580025183.01.T01:cds;Parent=MsG0580025183.01.T01
Gene Sequence

>MsG0580025183.01.T01

ATGGGTTTACCTGACCCGGATCCTGAATCCATCTTAGACGGCTCTGACCCTATTTGGGAAGCTGTTAAGCAAGAAGCTAAGCTTGAGGCAGAGAAGGAACCAGTTTTGAGTAGCTTTCTGTATGCAAGTGTTTTGGCACATGAGTGTTTGGAGCAAGTTCTAGCTTTTGTTGTTGCTAGCCGTCTTCAAAGTCCTACTCTTTTGGCTACACAGCTTATGGATATAATATGCAATGTTTTCATGCATGACAAATCTATTCAGAGATCAATCCGCCTCGATGTTCAGGGTTTCCATTCTCTGCAAACTTATCGAGTAGCGCATGCATTGTGGCACCAGGGACGCAAAGTCTTGGCCTTGGCTTTGCAAAGCCGTGTTAGCGAGGTTTTTGGAATTGACATTCATCCTGCTGCAAAAATTGGGGAGGGAATTTTATTAGATCATGGGACAGGCGTGATTATTGGTGAAACTGCTGTTATTGGAAACAGAGTTTCATTGATGCAAGCTGTGACATTAGGAGGCACGGGGAAGGAAACAGGTGATCGCCATCCCAAAGTAGGTGAAGGGGCACTGATTGGAGCTGGTTCAACTATACTCGGAAATATAAAAATTGGTGAAGGTGTGATGATTGCTGCTGGCTCCCTTGTGTTAAATGATGCCCCTCCCCGCAGCATTGTGGCGGGAATACCGGCAAAAGTTATTGGAGGTCTCCGGGAGCATGACCCATCTTTAACCATGAGACATGATGCTACAAAACCATTTTTCTCTCATGTAGCTACTAACTTTAGAGATGAAAAGTCCAGTGGTTGCGAAGCTGCCAACCAAGTTTGGGGTTCCGAACAAACATTTCAAAATATCGCAATAATGTTATGGTGTCTATGGCGTCGAAGGAACAATAAAGTGTCAGAAGGTGATATGAAAGAAGTGCGGCTGACTGTGCACTTAGCGCGCGACATGTTGAACCAATGGTAA
Protein sequence

>MsG0580025183.01.T01

MGLPDPDPESILDGSDPIWEAVKQEAKLEAEKEPVLSSFLYASVLAHECLEQVLAFVVASRLQSPTLLATQLMDIICNVFMHDKSIQRSIRLDVQGFHSLQTYRVAHALWHQGRKVLALALQSRVSEVFGIDIHPAAKIGEGILLDHGTGVIIGETAVIGNRVSLMQAVTLGGTGKETGDRHPKVGEGALIGAGSTILGNIKIGEGVMIAAGSLVLNDAPPRSIVAGIPAKVIGGLREHDPSLTMRHDATKPFFSHVATNFRDEKSSGCEAANQVWGSEQTFQNIAIMLWCLWRRRNNKVSEGDMKEVRLTVHLARDMLNQW*