AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580025263.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580025263.01.T01 MTR_5g025410 88.313 753 18 3 1 741 1 695 0.0 1288
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580025263.01.T01 AT1G31780 66.667 753 166 9 1 741 1 680 0.0 945

Find 163 sgRNAs with CRISPR-Local

Find 531 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCTCTGTTTGGTCTTATTT+TGG 0.110512 5:-16131193 MsG0580025263.01.T01:CDS
CTTGAGATACTAAACATTAT+TGG 0.144855 5:-16130831 MsG0580025263.01.T01:three_prime_UTR
AAAACACAAACCTGAATTAT+TGG 0.164317 5:+16132786 None:intergenic
AATCAGATAAGAACTATATT+AGG 0.194033 5:-16130997 MsG0580025263.01.T01:CDS
TCTTAGGGTTACTTACTTAA+TGG 0.199668 5:-16132662 MsG0580025263.01.T01:intron
AGATCCATTCTCAGAGTTAT+TGG 0.219068 5:+16133321 None:intergenic
ACAATAATTCAAACCTCTTC+AGG 0.230873 5:+16137155 None:intergenic
ACTTTCCCGCAAACTGAAAA+AGG 0.231487 5:-16138940 MsG0580025263.01.T01:CDS
CGTCCTTATGAATTGAATTA+TGG 0.234939 5:+16131289 None:intergenic
GCTTATTTATAAGGCTATTA+TGG 0.235940 5:-16131070 MsG0580025263.01.T01:CDS
TTCAGAAGCTCGCCAACTTC+TGG 0.244564 5:+16134435 None:intergenic
TCCGGTTATATCTGCTATAT+TGG 0.262015 5:-16132811 MsG0580025263.01.T01:CDS
TATATTGGATCCAATAATTC+AGG 0.284567 5:-16132796 MsG0580025263.01.T01:intron
AAGTGTATTACTGAGTTTAT+AGG 0.286084 5:+16133183 None:intergenic
TATAGGTGTGGCCAGGTCAC+TGG 0.289237 5:-16131106 MsG0580025263.01.T01:CDS
AGCTTATGAGCTTATTTATA+AGG 0.299993 5:-16131079 MsG0580025263.01.T01:CDS
GGGATCTGGATAGCCATTCT+TGG 0.301755 5:+16131044 None:intergenic
ATCGAGAAACTCGTGATTAA+TGG 0.304706 5:+16138791 None:intergenic
CTTTACATCTAGGTGGGTTC+AGG 0.323577 5:-16134490 MsG0580025263.01.T01:intron
AGCATGATGGTTCCTGCTTC+TGG 0.328326 5:-16132852 MsG0580025263.01.T01:CDS
AATATAGTTCTTATCTGATT+GGG 0.333325 5:+16131000 None:intergenic
GCTATTCAACAACCTCTATC+TGG 0.334688 5:-16131441 MsG0580025263.01.T01:CDS
TAAAGACAGTTCAAGGATAC+TGG 0.346881 5:-16132366 MsG0580025263.01.T01:intron
GGGATGCCTTGCCAACGCCC+TGG 0.353488 5:+16131023 None:intergenic
TCAGGCTGAATGTAGAAAAC+TGG 0.356063 5:-16134472 MsG0580025263.01.T01:CDS
TAATATAGTTCTTATCTGAT+TGG 0.356142 5:+16130999 None:intergenic
TGGTACCCCACTGGCTGAAC+TGG 0.380630 5:-16131253 MsG0580025263.01.T01:CDS
TGCTTCGCATGCCGCGCAAC+TGG 0.396916 5:-16138769 MsG0580025263.01.T01:intron
CTTCCATAATTCAATTCATA+AGG 0.401528 5:-16131292 MsG0580025263.01.T01:CDS
ATCAGATAAGAACTATATTA+GGG 0.405047 5:-16130996 MsG0580025263.01.T01:CDS
TATGTTAGGCTGGCTGCATC+AGG 0.407815 5:-16133957 MsG0580025263.01.T01:intron
TGTTCAACTCTCACTTTAAA+CGG 0.407884 5:+16133238 None:intergenic
GAGTTGCTTTGCTGTTGGTC+TGG 0.409085 5:+16133345 None:intergenic
CTTGCCAACGCCCTGGGATC+TGG 0.409335 5:+16131030 None:intergenic
CGATATGTTGGTGATATGTT+AGG 0.411372 5:-16133971 MsG0580025263.01.T01:CDS
GGATGCCTTGCCAACGCCCT+GGG 0.412902 5:+16131024 None:intergenic
CGATAGTTGATCGGAGGTTA+CGG 0.412937 5:+16138829 None:intergenic
GAAGAAGAAGAAGACGAGAA+TGG 0.413293 5:-16138991 MsG0580025263.01.T01:exon
TTACAGGATAGCAAAGGCTT+TGG 0.415391 5:-16137300 MsG0580025263.01.T01:intron
GCGTGCTGGTTTAGAGCTAA+TGG 0.418347 5:-16135531 MsG0580025263.01.T01:CDS
GAGAGCTTGAAAGCTCTGTT+TGG 0.424314 5:-16131204 MsG0580025263.01.T01:CDS
TAGTGCATTGTGTCTCATAT+TGG 0.427619 5:+16134078 None:intergenic
GGATCTGGATAGCCATTCTT+GGG 0.430421 5:+16131045 None:intergenic
AAACAGCTGTGCGCTACCTC+AGG 0.435522 5:-16134413 MsG0580025263.01.T01:CDS
TATCACCAACATATCGTAAT+GGG 0.438690 5:+16133978 None:intergenic
CTGCTCTTTGTAACACACTA+TGG 0.440851 5:-16133034 MsG0580025263.01.T01:CDS
TCATGAGCATGCACTTCAAT+AGG 0.445031 5:+16134001 None:intergenic
CTGGTATCAACAATTGCATC+TGG 0.450863 5:+16133364 None:intergenic
GCCTGAGTTTGAGCAAATAC+AGG 0.450961 5:-16131154 MsG0580025263.01.T01:CDS
TTCAGTTTGCGGGAAAGTCC+CGG 0.452886 5:+16138945 None:intergenic
TTGGAGAGTTGCTTTGCTGT+TGG 0.454058 5:+16133340 None:intergenic
ATAATTCAATTCATAAGGAC+GGG 0.457260 5:-16131287 MsG0580025263.01.T01:CDS
AAGAAGAAGAAGACGAGAAT+GGG 0.469945 5:-16138990 MsG0580025263.01.T01:exon
CTCTCCAATAACTCTGAGAA+TGG 0.471355 5:-16133325 MsG0580025263.01.T01:CDS
TTGCGGTCTGAAGCTTCTAT+AGG 0.474003 5:-16131123 MsG0580025263.01.T01:CDS
GACGGTGGCGGGTCTAGCGC+CGG 0.477065 5:-16138964 MsG0580025263.01.T01:CDS
ACAAACATAATGAGCAGGAT+TGG 0.483066 5:+16130940 None:intergenic
ATAGGTGTGGCCAGGTCACT+GGG 0.485454 5:-16131105 MsG0580025263.01.T01:CDS
AGCAGAGGCGCACAAGTCAA+AGG 0.486551 5:-16132249 MsG0580025263.01.T01:CDS
GACACTCCTTCTCGTACAGC+CGG 0.486602 5:+16132906 None:intergenic
AATAACTCTGAGAATGGATC+TGG 0.488847 5:-16133319 MsG0580025263.01.T01:CDS
TCCAATATAGCAGATATAAC+CGG 0.490741 5:+16132810 None:intergenic
AAATTTCATTTGCAGCGTGC+TGG 0.492144 5:-16135545 MsG0580025263.01.T01:intron
CAATAATTCAAACCTCTTCA+GGG 0.492787 5:+16137156 None:intergenic
ACAACCTCTATCTGGATATG+AGG 0.494996 5:-16131433 MsG0580025263.01.T01:CDS
AAATCAGTTGCGTGTTCTTG+TGG 0.495429 5:-16131370 MsG0580025263.01.T01:CDS
ACCTGTATTTGCTCAAACTC+AGG 0.496927 5:+16131153 None:intergenic
GAAAATCTTTATTCTCAACT+TGG 0.499695 5:-16132632 MsG0580025263.01.T01:CDS
TGTCTTCCAGTTCAGCCAGT+GGG 0.500914 5:+16131247 None:intergenic
ACACTCCTTCTCGTACAGCC+GGG 0.503107 5:+16132907 None:intergenic
GCAACCTCATATCCAGATAG+AGG 0.509521 5:+16131429 None:intergenic
AAGCTCTCTGATAGAACGGC+TGG 0.512752 5:+16131219 None:intergenic
GCTGAGTATGTGAAAAGGCT+TGG 0.513841 5:-16131405 MsG0580025263.01.T01:CDS
AGAATGGGAACGACGGTGGC+GGG 0.515715 5:-16138975 MsG0580025263.01.T01:CDS
GAGCTTATGAGCGCCTATGC+AGG 0.518385 5:-16135484 MsG0580025263.01.T01:intron
ATATCACCAACATATCGTAA+TGG 0.518994 5:+16133977 None:intergenic
ATGAATTGAATTATGGAAGT+GGG 0.521954 5:+16131296 None:intergenic
ATATAGTTCTTATCTGATTG+GGG 0.524029 5:+16131001 None:intergenic
TTTAGTTAGTTGACTAGAGT+CGG 0.527143 5:+16132190 None:intergenic
TTTAGATCTCAGATTTACTT+GGG 0.527870 5:-16133064 MsG0580025263.01.T01:intron
GTTGCTTAGGACACATCATC+AGG 0.527906 5:-16136956 MsG0580025263.01.T01:intron
CATAATTCAATTCATAAGGA+CGG 0.528227 5:-16131288 MsG0580025263.01.T01:CDS
GAAGCTTCAGACCGCAACCT+TGG 0.528440 5:+16131129 None:intergenic
GACACTGACAATCCAGAAGT+TGG 0.530203 5:-16134447 MsG0580025263.01.T01:CDS
CACTTGCGGAATGCTGTGAT+AGG 0.530688 5:-16138626 MsG0580025263.01.T01:intron
TATGAATTGAATTATGGAAG+TGG 0.531225 5:+16131295 None:intergenic
CCGCACTGCTTCATCATCAC+TGG 0.531283 5:-16132138 MsG0580025263.01.T01:intron
CCAACTGTAAAGTGTTGCTT+AGG 0.531460 5:-16136969 MsG0580025263.01.T01:CDS
TGTGGTACTTATAATGTCAC+TGG 0.531463 5:+16137259 None:intergenic
GCTATTATGGAACCCAAGAA+TGG 0.533607 5:-16131057 MsG0580025263.01.T01:CDS
AGTATTCTCGTCGTAGAAAG+AGG 0.535224 5:+16138863 None:intergenic
TTGAGCAAATACAGGTTCCA+AGG 0.537225 5:-16131146 MsG0580025263.01.T01:CDS
AGAATGGCTATCCAGATCCC+AGG 0.538334 5:-16131041 MsG0580025263.01.T01:CDS
GCGCACAAGTCAAAGGGAGT+TGG 0.538827 5:-16132242 MsG0580025263.01.T01:CDS
GCAGAGGCGCACAAGTCAAA+GGG 0.541225 5:-16132248 MsG0580025263.01.T01:CDS
TTTCAAGTATTGTGCAGAAG+AGG 0.541277 5:-16134376 MsG0580025263.01.T01:intron
TGTTGATCTTTCTCCTCCCC+CGG 0.541848 5:-16132925 MsG0580025263.01.T01:CDS
GAGAATGGGAACGACGGTGG+CGG 0.542162 5:-16138976 MsG0580025263.01.T01:exon
TTTAGAGCTAATGGATATGA+TGG 0.544473 5:-16135522 MsG0580025263.01.T01:CDS
GAAACTCATCAAGAAGAAGT+AGG 0.545806 5:-16132220 MsG0580025263.01.T01:CDS
AAATACAGGTTCCAAGGTTG+CGG 0.548662 5:-16131140 MsG0580025263.01.T01:CDS
TTTGGATAGCGTGGAGAATG+AGG 0.551443 5:-16138655 MsG0580025263.01.T01:CDS
TTGAGTGAAGATAAGAGATC+CGG 0.555762 5:+16138894 None:intergenic
CAGGCTGAATGTAGAAAACT+GGG 0.556163 5:-16134471 MsG0580025263.01.T01:CDS
AAGCTTCTATAGGTGTGGCC+AGG 0.556484 5:-16131113 MsG0580025263.01.T01:CDS
CAGATCCCAGGGCGTTGGCA+AGG 0.557184 5:-16131029 MsG0580025263.01.T01:CDS
GCTCTTACACGTGGAGGACC+TGG 0.559865 5:-16134037 MsG0580025263.01.T01:CDS
ATAAGCTTCACCCAGTGACC+TGG 0.560887 5:+16131095 None:intergenic
GTCTGAAGCTTCTATAGGTG+TGG 0.562795 5:-16131118 MsG0580025263.01.T01:CDS
CGGAGGTTACGGCGAGCTTG+AGG 0.569536 5:+16138840 None:intergenic
TTATCAGCTCTCCCCTGAAG+AGG 0.569618 5:-16137168 MsG0580025263.01.T01:intron
ACGGTGGCGGGTCTAGCGCC+GGG 0.573517 5:-16138963 MsG0580025263.01.T01:CDS
CTATCCAGATCCCAGGGCGT+TGG 0.573616 5:-16131034 MsG0580025263.01.T01:CDS
GTGTCTTCCAGTTCAGCCAG+TGG 0.574423 5:+16131246 None:intergenic
AACAGCTGTGCGCTACCTCA+GGG 0.577762 5:-16134412 MsG0580025263.01.T01:CDS
AATTAACAAACATAATGAGC+AGG 0.578632 5:+16130935 None:intergenic
TTGTTAGGCTTTGGATAGCG+TGG 0.578669 5:-16138664 MsG0580025263.01.T01:intron
TAGGGTTACTTACTTAATGG+TGG 0.580702 5:-16132659 MsG0580025263.01.T01:CDS
AAGGACGGGGACAATGAAGT+TGG 0.580965 5:-16131273 MsG0580025263.01.T01:CDS
ATGATGCAAAATATCTGCAA+AGG 0.582539 5:-16132598 MsG0580025263.01.T01:intron
CCTAAGCAACACTTTACAGT+TGG 0.583433 5:+16136969 None:intergenic
CACTCCTTCTCGTACAGCCG+GGG 0.586739 5:+16132908 None:intergenic
TTATAGGAGACTATAAGACT+TGG 0.588121 5:+16133199 None:intergenic
AAGTTCTCGTTCAGATGCCA+AGG 0.594563 5:+16133405 None:intergenic
TTTCAAGCTCTCTGATAGAA+CGG 0.595179 5:+16131215 None:intergenic
AAAGATCAACAGCAACAAGT+GGG 0.599213 5:+16132937 None:intergenic
ATAGTTCTTATCTGATTGGG+GGG 0.602107 5:+16131003 None:intergenic
AGATGATTCTTCACCTGCAT+AGG 0.602469 5:+16135471 None:intergenic
CAATGAAGTTGGTACCCCAC+TGG 0.603951 5:-16131262 MsG0580025263.01.T01:CDS
TTGCTGCTGAGTATGTGAAA+AGG 0.605529 5:-16131410 MsG0580025263.01.T01:CDS
ATAGGTCGAGGCATTCCACC+AGG 0.608061 5:+16134019 None:intergenic
TATTTGCTCAAACTCAGGCA+TGG 0.609255 5:+16131158 None:intergenic
ATGTTGGTGATATGTTAGGC+TGG 0.612407 5:-16133967 MsG0580025263.01.T01:CDS
GATGTGTGAACAAGCAGCAG+AGG 0.615419 5:-16132264 MsG0580025263.01.T01:CDS
GAAAGATCAACAGCAACAAG+TGG 0.616890 5:+16132936 None:intergenic
TTCTTGTTTGAGCCTCTCTG+TGG 0.617010 5:+16137241 None:intergenic
GCATGCACTTCAATAGGTCG+AGG 0.620723 5:+16134007 None:intergenic
ATGATGGCGGTGTATCAAGA+AGG 0.620796 5:-16135506 MsG0580025263.01.T01:CDS
GTCTTCCAGTTCAGCCAGTG+GGG 0.621983 5:+16131248 None:intergenic
AATAATTCAAACCTCTTCAG+GGG 0.629801 5:+16137157 None:intergenic
TATAGTTCTTATCTGATTGG+GGG 0.631538 5:+16131002 None:intergenic
TGAATTGAATTATGGAAGTG+GGG 0.631669 5:+16131297 None:intergenic
TCAAAGATCTGAATCGCGAA+CGG 0.631791 5:-16139021 MsG0580025263.01.T01:five_prime_UTR
AGATCAACAGCAACAAGTGG+GGG 0.631953 5:+16132939 None:intergenic
CATGACCCATTACGATATGT+TGG 0.633573 5:-16133983 MsG0580025263.01.T01:CDS
CTTACACGTGGAGGACCTGG+TGG 0.634185 5:-16134034 MsG0580025263.01.T01:CDS
TGAGAACTACAACAGCATGA+TGG 0.641022 5:-16132865 MsG0580025263.01.T01:CDS
AAGATCAACAGCAACAAGTG+GGG 0.642402 5:+16132938 None:intergenic
GAATGAGGTGAATTCACTTG+CGG 0.643635 5:-16138640 MsG0580025263.01.T01:CDS
TTCACACATCTGCAACAAGT+AGG 0.648170 5:+16132277 None:intergenic
GACGAGAATGGGAACGACGG+TGG 0.653213 5:-16138979 MsG0580025263.01.T01:exon
GAATGGCTATCCAGATCCCA+GGG 0.654201 5:-16131040 MsG0580025263.01.T01:CDS
TAATTCAATTCATAAGGACG+GGG 0.661545 5:-16131286 MsG0580025263.01.T01:CDS
TTTATAAGTGCTCTTACACG+TGG 0.662487 5:-16134046 MsG0580025263.01.T01:CDS
AGAATCTCGAATCGATACAC+CGG 0.663325 5:-16138913 MsG0580025263.01.T01:CDS
ATAAGTGCTCTTACACGTGG+AGG 0.664709 5:-16134043 MsG0580025263.01.T01:CDS
AAGAGGAATTACCAGTTGCG+CGG 0.674723 5:+16138758 None:intergenic
ACTCCTTCTCGTACAGCCGG+GGG 0.686984 5:+16132909 None:intergenic
GAAGACGAGAATGGGAACGA+CGG 0.707972 5:-16138982 MsG0580025263.01.T01:exon
AGAGCTAATGGATATGATGG+CGG 0.714793 5:-16135519 MsG0580025263.01.T01:CDS
ACATTATAAGTACCACAGAG+AGG 0.748544 5:-16137253 MsG0580025263.01.T01:CDS
CCAGTGATGATGAAGCAGTG+CGG 0.756307 5:+16132138 None:intergenic
AAAGAACAGATCTTTCCCTG+AGG 0.759398 5:+16134397 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAATAAATAAATAAAT+AGG + Chr5:16136271-16136290 None:intergenic 0.0%
!! AATAAATAAATAAATAAATA+GGG + Chr5:16136270-16136289 None:intergenic 0.0%
!! ATGTTAAATTAAAAATTAGA+TGG + Chr5:16136296-16136315 None:intergenic 10.0%
!! ATTAAGTGAAAAAATTAATT+TGG - Chr5:16137967-16137986 MsG0580025263.01.T01:intron 10.0%
!! TAAATAAATAAATAAATAGG+GGG + Chr5:16136268-16136287 None:intergenic 10.0%
!!! TATTTTAATTGCTATATTTT+GGG - Chr5:16131849-16131868 MsG0580025263.01.T01:intron 10.0%
!! AAAATTACTCTAAATTAATG+TGG - Chr5:16133488-16133507 MsG0580025263.01.T01:intron 15.0%
!! AAATGGAAAATATATATCTT+TGG + Chr5:16134489-16134508 None:intergenic 15.0%
!! AAGTAAAAACAAAATTGAAT+TGG + Chr5:16134971-16134990 None:intergenic 15.0%
!! AATAATTATTGATGTGTAAT+TGG - Chr5:16138109-16138128 MsG0580025263.01.T01:intron 15.0%
!! AATCATTCATTCAATAAAAT+TGG + Chr5:16136140-16136159 None:intergenic 15.0%
!! AGTAAAAACAAAATTGAATT+GGG + Chr5:16134970-16134989 None:intergenic 15.0%
!! TACGGAAATTTAAAAAAAAA+TGG - Chr5:16133823-16133842 MsG0580025263.01.T01:intron 15.0%
!! TTACACATCAATAATTATTA+CGG + Chr5:16138108-16138127 None:intergenic 15.0%
!!! AAGATCTTTGAATAAAATTT+TGG - Chr5:16132481-16132500 MsG0580025263.01.T01:intron 15.0%
!!! ACATTTTTTGATATTTTGAA+AGG - Chr5:16136828-16136847 MsG0580025263.01.T01:intron 15.0%
!!! AGATCTTTGAATAAAATTTT+GGG - Chr5:16132482-16132501 MsG0580025263.01.T01:intron 15.0%
!!! CAAATTTTGAAATATCATTA+GGG - Chr5:16133025-16133044 MsG0580025263.01.T01:CDS 15.0%
!!! GTATTTTAATTGCTATATTT+TGG - Chr5:16131848-16131867 MsG0580025263.01.T01:intron 15.0%
!!! TGGTATAATTTTTTCAATTT+TGG - Chr5:16132288-16132307 MsG0580025263.01.T01:CDS 15.0%
!!! TTTTTTTTGAATTGTGATAA+TGG - Chr5:16136001-16136020 MsG0580025263.01.T01:intron 15.0%
!! AAAATATATCTCCTGATATT+TGG + Chr5:16136341-16136360 None:intergenic 20.0%
!! AAATATCTTCAACTGAAATA+TGG + Chr5:16135522-16135541 None:intergenic 20.0%
!! AAGTAAACTCATAATCAAAT+TGG + Chr5:16132969-16132988 None:intergenic 20.0%
!! AATATAGTTCTTATCTGATT+GGG + Chr5:16138818-16138837 None:intergenic 20.0%
!! AATCAGATAAGAACTATATT+AGG - Chr5:16138818-16138837 MsG0580025263.01.T01:CDS 20.0%
!! AATGAAGTGGAATAAATTAA+TGG - Chr5:16138139-16138158 MsG0580025263.01.T01:intron 20.0%
!! ATCAGATAAGAACTATATTA+GGG - Chr5:16138819-16138838 MsG0580025263.01.T01:CDS 20.0%
!! ATTAAGGATTACTAATATAG+TGG + Chr5:16136701-16136720 None:intergenic 20.0%
!! CATATTATTATCTGTTATCA+TGG - Chr5:16135554-16135573 MsG0580025263.01.T01:intron 20.0%
!! CGTCAAGATTAATAAAATTA+AGG + Chr5:16136717-16136736 None:intergenic 20.0%
!! TAATATAGTTCTTATCTGAT+TGG + Chr5:16138819-16138838 None:intergenic 20.0%
!! TAATTTATAAAGACAGTTCA+AGG - Chr5:16137442-16137461 MsG0580025263.01.T01:intron 20.0%
!! TACATCTTAAATATAAACCA+TGG + Chr5:16135942-16135961 None:intergenic 20.0%
!! TAGAATTGCACATATAATAT+GGG + Chr5:16132908-16132927 None:intergenic 20.0%
!! TTAAGGATTACTAATATAGT+GGG + Chr5:16136700-16136719 None:intergenic 20.0%
!! TTAATGAGAAAAATCTTTGA+GGG + Chr5:16138344-16138363 None:intergenic 20.0%
!! TTAGAATTGCACATATAATA+TGG + Chr5:16132909-16132928 None:intergenic 20.0%
!!! AGAACTTTAAGAATATCAAA+TGG + Chr5:16134506-16134525 None:intergenic 20.0%
!!! ATATTCTAATTTGATGATTG+TGG + Chr5:16133540-16133559 None:intergenic 20.0%
!!! ATGGTTTATATTTAAGATGT+AGG - Chr5:16135941-16135960 MsG0580025263.01.T01:intron 20.0%
!!! GCAAATTTTGAAATATCATT+AGG - Chr5:16133024-16133043 MsG0580025263.01.T01:CDS 20.0%
!!! GTAATTTTTACAATAGATTG+AGG + Chr5:16133476-16133495 None:intergenic 20.0%
!!! GTTATTCTATTTTTTTGTCT+AGG - Chr5:16134039-16134058 MsG0580025263.01.T01:CDS 20.0%
!!! TATTCTAATTTGATGATTGT+GGG + Chr5:16133539-16133558 None:intergenic 20.0%
!!! TCATAATCAAATTGGTATTT+TGG + Chr5:16132961-16132980 None:intergenic 20.0%
!!! TGGTTTATATTTAAGATGTA+GGG - Chr5:16135942-16135961 MsG0580025263.01.T01:intron 20.0%
!!! TTAAAAAGGATATTGTTGTT+GGG - Chr5:16132029-16132048 MsG0580025263.01.T01:intron 20.0%
!!! TTCATGATTTATGATTTTAC+TGG - Chr5:16135220-16135239 MsG0580025263.01.T01:intron 20.0%
!!! TTGGATTCTATTAATTTTGT+TGG - Chr5:16139003-16139022 MsG0580025263.01.T01:five_prime_UTR 20.0%
!!! TTTCACTGAAAATGTTTTTA+TGG - Chr5:16131370-16131389 MsG0580025263.01.T01:CDS 20.0%
!!! TTTTACAGTATATTGACTTA+CGG + Chr5:16133569-16133588 None:intergenic 20.0%
! AAAACACAAACCTGAATTAT+TGG + Chr5:16137032-16137051 None:intergenic 25.0%
! AAAGAAACAATACACCAAAA+TGG - Chr5:16138040-16138059 MsG0580025263.01.T01:intron 25.0%
! AAATCATGAATAAAGAATGC+AGG + Chr5:16133176-16133195 None:intergenic 25.0%
! AACAGTTATTCAAAACAAGT+AGG - Chr5:16131613-16131632 MsG0580025263.01.T01:intron 25.0%
! AACATAATTGAGAAACTGTA+TGG - Chr5:16131822-16131841 MsG0580025263.01.T01:intron 25.0%
! AAGGAAAATAATGCATTTAG+AGG - Chr5:16131889-16131908 MsG0580025263.01.T01:intron 25.0%
! AAGTGTATTACTGAGTTTAT+AGG + Chr5:16136635-16136654 None:intergenic 25.0%
! AATTAACAAACATAATGAGC+AGG + Chr5:16138883-16138902 None:intergenic 25.0%
! ACAGTTTCTCAATTATGTTA+TGG + Chr5:16131821-16131840 None:intergenic 25.0%
! ACTGTAATTCGTTATTTGTT+TGG - Chr5:16131252-16131271 MsG0580025263.01.T01:CDS 25.0%
! AGAAACAATTAATACTCTCT+GGG + Chr5:16135071-16135090 None:intergenic 25.0%
! AGAATTGCACATATAATATG+GGG + Chr5:16132907-16132926 None:intergenic 25.0%
! AGCTTATGAGCTTATTTATA+AGG - Chr5:16138736-16138755 MsG0580025263.01.T01:intron 25.0%
! ATAAAGTAGAAGGTAAGTAT+GGG + Chr5:16134213-16134232 None:intergenic 25.0%
! ATAATTCAATTCATAAGGAC+GGG - Chr5:16138528-16138547 MsG0580025263.01.T01:intron 25.0%
! ATATAGTTCTTATCTGATTG+GGG + Chr5:16138817-16138836 None:intergenic 25.0%
! ATGAATATACATGAATGTTG+TGG - Chr5:16135177-16135196 MsG0580025263.01.T01:intron 25.0%
! ATGAATTGAATTATGGAAGT+GGG + Chr5:16138522-16138541 None:intergenic 25.0%
! ATTAATTCTCTCTCTCTTAA+AGG + Chr5:16133897-16133916 None:intergenic 25.0%
! ATTGACCTATGTTATATCTT+AGG - Chr5:16137137-16137156 MsG0580025263.01.T01:intron 25.0%
! ATTTATTCCACTTCATTTGT+TGG + Chr5:16138136-16138155 None:intergenic 25.0%
! CAATTACACAAGAATATCTA+TGG + Chr5:16133095-16133114 None:intergenic 25.0%
! CATAATTCAATTCATAAGGA+CGG - Chr5:16138527-16138546 MsG0580025263.01.T01:intron 25.0%
! CATAGATATTCTTGTGTAAT+TGG - Chr5:16133093-16133112 MsG0580025263.01.T01:intron 25.0%
! CTTCCATAATTCAATTCATA+AGG - Chr5:16138523-16138542 MsG0580025263.01.T01:intron 25.0%
! CTTGAGATACTAAACATTAT+TGG - Chr5:16138984-16139003 MsG0580025263.01.T01:exon 25.0%
! GAAAATCTTTATTCTCAACT+TGG - Chr5:16137183-16137202 MsG0580025263.01.T01:CDS 25.0%
! GACAAAAAAATAGAATAACC+TGG + Chr5:16134038-16134057 None:intergenic 25.0%
! GCTATTCTCAAGAAAAAATA+AGG + Chr5:16133656-16133675 None:intergenic 25.0%
! GCTTATTTATAAGGCTATTA+TGG - Chr5:16138745-16138764 MsG0580025263.01.T01:intron 25.0%
! GGATCAAAATGAAAATCTAA+TGG - Chr5:16133140-16133159 MsG0580025263.01.T01:intron 25.0%
! GTTAAAAAGGATATTGTTGT+TGG - Chr5:16132028-16132047 MsG0580025263.01.T01:intron 25.0%
! GTTAATGAGAAAAATCTTTG+AGG + Chr5:16138345-16138364 None:intergenic 25.0%
! GTTGAAGATATTTCATATTC+TGG - Chr5:16135529-16135548 MsG0580025263.01.T01:CDS 25.0%
! TAAAAAGTAATCTAATGTGC+AGG - Chr5:16133584-16133603 MsG0580025263.01.T01:intron 25.0%
! TAAGGATTACTAATATAGTG+GGG + Chr5:16136699-16136718 None:intergenic 25.0%
! TACTTATAGTCTTTACATCT+AGG - Chr5:16135315-16135334 MsG0580025263.01.T01:intron 25.0%
! TATATTGGATCCAATAATTC+AGG - Chr5:16137019-16137038 MsG0580025263.01.T01:CDS 25.0%
! TATGAATTGAATTATGGAAG+TGG + Chr5:16138523-16138542 None:intergenic 25.0%
! TCTAGTATTCGTACAAAAAA+TGG + Chr5:16136054-16136073 None:intergenic 25.0%
! TGAAAAAATGTTTCATTTGC+TGG - Chr5:16131999-16132018 MsG0580025263.01.T01:intron 25.0%
! TGAATATACATGAATGTTGT+GGG - Chr5:16135178-16135197 MsG0580025263.01.T01:intron 25.0%
! TGATTATGAGTTTACTTAAG+TGG - Chr5:16132972-16132991 MsG0580025263.01.T01:CDS 25.0%
! TTAATTCTCTCTCTCTTAAA+GGG + Chr5:16133896-16133915 None:intergenic 25.0%
! TTATTATCTGTTATCATGGA+TGG - Chr5:16135558-16135577 MsG0580025263.01.T01:intron 25.0%
! TTGACCTATGTTATATCTTA+GGG - Chr5:16137138-16137157 MsG0580025263.01.T01:intron 25.0%
! TTGCTGGAAATAAGTTAAAA+AGG - Chr5:16132015-16132034 MsG0580025263.01.T01:intron 25.0%
! TTTAGATCTCAGATTTACTT+GGG - Chr5:16136751-16136770 MsG0580025263.01.T01:intron 25.0%
!! ATCGAGATTTTACTCATAAT+TGG + Chr5:16135252-16135271 None:intergenic 25.0%
!! ATTCTAATTTGATGATTGTG+GGG + Chr5:16133538-16133557 None:intergenic 25.0%
!! ATTTTACTCATAATTGGTGA+GGG + Chr5:16135246-16135265 None:intergenic 25.0%
!! TAGTTTTCTAATTCATGTTC+TGG - Chr5:16132336-16132355 MsG0580025263.01.T01:CDS 25.0%
!! TCTGAAATGTTGTTAAATGA+AGG - Chr5:16131308-16131327 MsG0580025263.01.T01:CDS 25.0%
!! TGTATTTTCAATGAAATCAG+AGG - Chr5:16137497-16137516 MsG0580025263.01.T01:intron 25.0%
!! TTTTAAGCTGATAAAGTAGA+AGG + Chr5:16134223-16134242 None:intergenic 25.0%
!! TTTTAGATCTCAGATTTACT+TGG - Chr5:16136750-16136769 MsG0580025263.01.T01:intron 25.0%
!!! AAATCAAGAAAGTCTTGTTT+TGG - Chr5:16135045-16135064 MsG0580025263.01.T01:intron 25.0%
!!! AACATCTTTTGTTGATAAAG+TGG + Chr5:16137862-16137881 None:intergenic 25.0%
!!! AATATTGACCATTCTAGTTT+TGG - Chr5:16135494-16135513 MsG0580025263.01.T01:CDS 25.0%
!!! ACATCTTTTGTTGATAAAGT+GGG + Chr5:16137861-16137880 None:intergenic 25.0%
!!! ACATTCCTTGAAGTATTTTT+GGG - Chr5:16137321-16137340 MsG0580025263.01.T01:intron 25.0%
!!! ACTTGTTTTTTCTTCTCTTT+TGG - Chr5:16137730-16137749 MsG0580025263.01.T01:intron 25.0%
!!! AGACAAAATTTTGATGCAAA+AGG + Chr5:16134159-16134178 None:intergenic 25.0%
!!! AGCATGACTAATTTTAAAGT+GGG + Chr5:16137943-16137962 None:intergenic 25.0%
!!! ATATATTTATTTCTGCTTGC+AGG - Chr5:16136387-16136406 MsG0580025263.01.T01:intron 25.0%
!!! ATATTTTTACAGGATAGCAA+AGG - Chr5:16132509-16132528 MsG0580025263.01.T01:intron 25.0%
!!! ATGAAACATTTTTTCATCTG+CGG + Chr5:16131995-16132014 None:intergenic 25.0%
!!! CATAGGTCAATTTTAGAATA+AGG + Chr5:16137128-16137147 None:intergenic 25.0%
!!! CTTGTTTTTTCTTCTCTTTT+GGG - Chr5:16137731-16137750 MsG0580025263.01.T01:intron 25.0%
!!! TAGCATGACTAATTTTAAAG+TGG + Chr5:16137944-16137963 None:intergenic 25.0%
!!! TAGGTTATTTTTGGTTGAAA+GGG - Chr5:16134900-16134919 MsG0580025263.01.T01:intron 25.0%
!!! TATTCATTTTAGAAGTCAAC+TGG - Chr5:16137473-16137492 MsG0580025263.01.T01:intron 25.0%
!!! TCTGAATGAAAACTTTTTCA+AGG - Chr5:16132796-16132815 MsG0580025263.01.T01:intron 25.0%
!!! TTTAGAGTGAAGTTTGTTTT+TGG - Chr5:16131761-16131780 MsG0580025263.01.T01:intron 25.0%
!!! TTTGATGTGTTTGATTTGTT+AGG - Chr5:16131136-16131155 MsG0580025263.01.T01:CDS 25.0%
!!! TTTGGGTTCTATATTTTTAC+AGG - Chr5:16132499-16132518 MsG0580025263.01.T01:intron 25.0%
AAACAATACACCAAAATGGT+GGG - Chr5:16138044-16138063 MsG0580025263.01.T01:intron 30.0%
AAGAAAAGAATTTAGCCAAC+AGG + Chr5:16133731-16133750 None:intergenic 30.0%
AAGGATTACTAATATAGTGG+GGG + Chr5:16136698-16136717 None:intergenic 30.0%
AATAATTCAAACCTCTTCAG+GGG + Chr5:16132661-16132680 None:intergenic 30.0%
AATTTGGATAGGCAATACAT+AGG + Chr5:16134841-16134860 None:intergenic 30.0%
ACAAGTCTGAAAAATCTTTG+AGG + Chr5:16138282-16138301 None:intergenic 30.0%
ACAATAATTCAAACCTCTTC+AGG + Chr5:16132663-16132682 None:intergenic 30.0%
ACAATAGATAGATCTGCAAT+GGG - Chr5:16133968-16133987 MsG0580025263.01.T01:CDS 30.0%
ACTAAAATGCACACGAATAA+TGG + Chr5:16137827-16137846 None:intergenic 30.0%
AGAAAAGAATTTAGCCAACA+GGG + Chr5:16133730-16133749 None:intergenic 30.0%
ATATCACCAACATATCGTAA+TGG + Chr5:16135841-16135860 None:intergenic 30.0%
ATATGGAACCAAAACTAGAA+TGG + Chr5:16135505-16135524 None:intergenic 30.0%
ATCATCTACTTAAGCTCATA+TGG - Chr5:16134360-16134379 MsG0580025263.01.T01:intron 30.0%
ATGATGCAAAATATCTGCAA+AGG - Chr5:16137217-16137236 MsG0580025263.01.T01:CDS 30.0%
CAAGTCTGAAAAATCTTTGA+GGG + Chr5:16138281-16138300 None:intergenic 30.0%
CAATAATTCAAACCTCTTCA+GGG + Chr5:16132662-16132681 None:intergenic 30.0%
CGTCCTTATGAATTGAATTA+TGG + Chr5:16138529-16138548 None:intergenic 30.0%
CTATCATAGCACTTATTCTA+AGG - Chr5:16133927-16133946 MsG0580025263.01.T01:intron 30.0%
CTTAGAATAAGTGCTATGAT+AGG + Chr5:16133929-16133948 None:intergenic 30.0%
CTTTCAACCAAAAATAACCT+AGG + Chr5:16134901-16134920 None:intergenic 30.0%
GAATTGCACATATAATATGG+GGG + Chr5:16132906-16132925 None:intergenic 30.0%
GAGAAACAATTAATACTCTC+TGG + Chr5:16135072-16135091 None:intergenic 30.0%
GATAAAGTAGAAGGTAAGTA+TGG + Chr5:16134214-16134233 None:intergenic 30.0%
GCAATGAACTGCAATATATA+TGG - Chr5:16137882-16137901 MsG0580025263.01.T01:intron 30.0%
GTAACCCTAAGATATAACAT+AGG + Chr5:16137145-16137164 None:intergenic 30.0%
GTGGTTAGTAAAAACAAACA+AGG + Chr5:16136079-16136098 None:intergenic 30.0%
TAAATGCTTGTTCGGTTTAT+TGG - Chr5:16131699-16131718 MsG0580025263.01.T01:intron 30.0%
TAAGATGCAATCCAAATATC+AGG - Chr5:16136327-16136346 MsG0580025263.01.T01:intron 30.0%
TAATTCAATTCATAAGGACG+GGG - Chr5:16138529-16138548 MsG0580025263.01.T01:intron 30.0%
TACAATAGATAGATCTGCAA+TGG - Chr5:16133967-16133986 MsG0580025263.01.T01:CDS 30.0%
TACTTAAATACAGGAGGAAA+GGG - Chr5:16135965-16135984 MsG0580025263.01.T01:intron 30.0%
TATACAACACGACTACAAAA+TGG + Chr5:16134723-16134742 None:intergenic 30.0%
TATAGTCTTTACATCTAGGT+GGG - Chr5:16135319-16135338 MsG0580025263.01.T01:intron 30.0%
TATAGTTCTTATCTGATTGG+GGG + Chr5:16138816-16138835 None:intergenic 30.0%
TATCACCAACATATCGTAAT+GGG + Chr5:16135840-16135859 None:intergenic 30.0%
TATTGCCCAAAAATACTTCA+AGG + Chr5:16137329-16137348 None:intergenic 30.0%
TCCAAAAGATATTGTGTGAA+AGG + Chr5:16136218-16136237 None:intergenic 30.0%
TCCAATATAGCAGATATAAC+CGG + Chr5:16137008-16137027 None:intergenic 30.0%
TCTTAGGGTTACTTACTTAA+TGG - Chr5:16137153-16137172 MsG0580025263.01.T01:intron 30.0%
TCTTTCTATTGAGATCTGAT+TGG - Chr5:16134535-16134554 MsG0580025263.01.T01:intron 30.0%
TGAATTGAATTATGGAAGTG+GGG + Chr5:16138521-16138540 None:intergenic 30.0%
TGATTTATGTATTTAGTGCG+AGG - Chr5:16132262-16132281 MsG0580025263.01.T01:CDS 30.0%
TGTTCAACTCTCACTTTAAA+CGG + Chr5:16136580-16136599 None:intergenic 30.0%
TTAGTTTCTGTGATTAGAGT+TGG - Chr5:16131331-16131350 MsG0580025263.01.T01:CDS 30.0%
TTATAGGAGACTATAAGACT+TGG + Chr5:16136619-16136638 None:intergenic 30.0%
TTATAGTCTTTACATCTAGG+TGG - Chr5:16135318-16135337 MsG0580025263.01.T01:intron 30.0%
TTATCATAGTCACCATTAGA+TGG + Chr5:16135588-16135607 None:intergenic 30.0%
TTTAGTTAGTTGACTAGAGT+CGG + Chr5:16137628-16137647 None:intergenic 30.0%
TTTCACATCAGTTAATCCTT+AGG - Chr5:16133193-16133212 MsG0580025263.01.T01:intron 30.0%
! AATTGTTTTCTGCATTGAGT+CGG - Chr5:16134623-16134642 MsG0580025263.01.T01:intron 30.0%
! AATTTTCTTACCAATTCTGC+AGG - Chr5:16135711-16135730 MsG0580025263.01.T01:intron 30.0%
! AGATCATGTGTAATTTTGCA+TGG - Chr5:16131504-16131523 MsG0580025263.01.T01:intron 30.0%
! ATGCAGAAAACAATTTTGCA+TGG + Chr5:16134618-16134637 None:intergenic 30.0%
! GATTTTACTCATAATTGGTG+AGG + Chr5:16135247-16135266 None:intergenic 30.0%
! GTGATTTGGCTGAAATTATT+AGG - Chr5:16132158-16132177 MsG0580025263.01.T01:CDS 30.0%
! GTTCTTGATAGAATTTTCGA+AGG - Chr5:16136544-16136563 MsG0580025263.01.T01:intron 30.0%
! GTTTTTACTTCTTTAGCCAT+TGG - Chr5:16134981-16135000 MsG0580025263.01.T01:intron 30.0%
! TATTTGATTTACAGAGCCAT+GGG + Chr5:16132708-16132727 None:intergenic 30.0%
! TCCTTTCACACAATATCTTT+TGG - Chr5:16136214-16136233 MsG0580025263.01.T01:intron 30.0%
! TCTTTGTATTGATCTTGTTC+TGG - Chr5:16134176-16134195 MsG0580025263.01.T01:intron 30.0%
! TGCAGAAAACAATTTTGCAT+GGG + Chr5:16134617-16134636 None:intergenic 30.0%
! TTATTTGATTTACAGAGCCA+TGG + Chr5:16132709-16132728 None:intergenic 30.0%
! TTCTAATTTGATGATTGTGG+GGG + Chr5:16133537-16133556 None:intergenic 30.0%
! TTCTTCCTCTCTTTTCTAAA+AGG - Chr5:16137704-16137723 MsG0580025263.01.T01:intron 30.0%
! TTGGCTAAATTCTTTTCTTG+AGG - Chr5:16133732-16133751 MsG0580025263.01.T01:intron 30.0%
! TTTAGAGCTAATGGATATGA+TGG - Chr5:16134293-16134312 MsG0580025263.01.T01:intron 30.0%
!! AGTGTTGATAAATGCTTGTT+CGG - Chr5:16131691-16131710 MsG0580025263.01.T01:intron 30.0%
!! ATAGCACTTATTCTAAGGTA+AGG - Chr5:16133932-16133951 MsG0580025263.01.T01:intron 30.0%
!! CTAAGTTCTAGATATAACAC+AGG + Chr5:16133067-16133086 None:intergenic 30.0%
!! CTTTGAAGCATTCATACATA+AGG + Chr5:16135897-16135916 None:intergenic 30.0%
!! GACATTCCTTGAAGTATTTT+TGG - Chr5:16137320-16137339 MsG0580025263.01.T01:intron 30.0%
!! TATAGATTTTTGCTGGTTGT+AGG - Chr5:16137757-16137776 MsG0580025263.01.T01:intron 30.0%
!! TGAGAGTAATATTGGTTTGT+GGG - Chr5:16134944-16134963 MsG0580025263.01.T01:intron 30.0%
!! TGGGTTTTATAGATTTTTGC+TGG - Chr5:16137750-16137769 MsG0580025263.01.T01:intron 30.0%
!! TGTGTTTTTGAATCTGATTC+CGG - Chr5:16137044-16137063 MsG0580025263.01.T01:CDS 30.0%
!!! AGTTTGTTTTTGGAAATTGC+TGG - Chr5:16131771-16131790 MsG0580025263.01.T01:intron 30.0%
!!! ATTTTGGGATTGTAAAATGC+AGG - Chr5:16131864-16131883 MsG0580025263.01.T01:intron 30.0%
!!! CTAGGTTATTTTTGGTTGAA+AGG - Chr5:16134899-16134918 MsG0580025263.01.T01:intron 30.0%
AAAATAGAGACGACAACTCA+CGG + Chr5:16136674-16136693 None:intergenic 35.0%
AAAGATCAACAGCAACAAGT+GGG + Chr5:16136881-16136900 None:intergenic 35.0%
AAAGGAGAAATCCTTTGTGA+AGG + Chr5:16136200-16136219 None:intergenic 35.0%
AAATCCTAAAATCGCTGTTC+AGG + Chr5:16133254-16133273 None:intergenic 35.0%
AACCTCTTTCAAACCAACAA+TGG + Chr5:16133331-16133350 None:intergenic 35.0%
AAGAAGAAGAAGACGAGAAT+GGG - Chr5:16130825-16130844 MsG0580025263.01.T01:three_prime_UTR 35.0%
AAGGAGAAATCCTTTGTGAA+GGG + Chr5:16136199-16136218 None:intergenic 35.0%
AATTATTACGGTATTCCGCT+TGG + Chr5:16138096-16138115 None:intergenic 35.0%
AATTGGACCAACAAATGAAG+TGG - Chr5:16138126-16138145 MsG0580025263.01.T01:intron 35.0%
AATTTCCGTAATTCAGCAAG+CGG + Chr5:16133813-16133832 None:intergenic 35.0%
ACAAACATAATGAGCAGGAT+TGG + Chr5:16138878-16138897 None:intergenic 35.0%
ACATTATAAGTACCACAGAG+AGG - Chr5:16132562-16132581 MsG0580025263.01.T01:intron 35.0%
ACTGAACTAAATGCATGAAG+AGG + Chr5:16131077-16131096 None:intergenic 35.0%
ACTTAAATACAGGAGGAAAG+GGG - Chr5:16135966-16135985 MsG0580025263.01.T01:intron 35.0%
AGATCCATTCTCAGAGTTAT+TGG + Chr5:16136497-16136516 None:intergenic 35.0%
ATAGATCTCATGCAATAGCA+GGG + Chr5:16134011-16134030 None:intergenic 35.0%
ATAGTTCTTATCTGATTGGG+GGG + Chr5:16138815-16138834 None:intergenic 35.0%
ATATAATATGGGGGATAGAG+AGG + Chr5:16132897-16132916 None:intergenic 35.0%
ATCGAGAAACTCGTGATTAA+TGG + Chr5:16131027-16131046 None:intergenic 35.0%
ATGGAAAAACTTACACCATG+TGG - Chr5:16138158-16138177 MsG0580025263.01.T01:intron 35.0%
ATGGTATTGCAATCAAATCC+CGG + Chr5:16137066-16137085 None:intergenic 35.0%
CAGAAGAGGTAATTTCTCAA+TGG - Chr5:16135453-16135472 MsG0580025263.01.T01:intron 35.0%
CAGTTTACCTAATGAACAGT+TGG - Chr5:16134575-16134594 MsG0580025263.01.T01:intron 35.0%
CCAACAATGGCTAGTAATAA+TGG + Chr5:16133318-16133337 None:intergenic 35.0%
CCATTATTACTAGCCATTGT+TGG - Chr5:16133315-16133334 MsG0580025263.01.T01:CDS 35.0%
CTCAAGTAAACTTGTGACTT+AGG + Chr5:16133282-16133301 None:intergenic 35.0%
CTCTAACATGCTAGATACTA+CGG + Chr5:16132215-16132234 None:intergenic 35.0%
CTTGATTTCTTCCAAGTACA+AGG + Chr5:16135033-16135052 None:intergenic 35.0%
GAAACAATACACCAAAATGG+TGG - Chr5:16138043-16138062 MsG0580025263.01.T01:intron 35.0%
GAAACTCATCAAGAAGAAGT+AGG - Chr5:16137595-16137614 MsG0580025263.01.T01:intron 35.0%
GATATAACCGGATCAAAAAC+AGG + Chr5:16136996-16137015 None:intergenic 35.0%
GATGTTCTCTGGATTATAGT+GGG - Chr5:16132136-16132155 MsG0580025263.01.T01:intron 35.0%
GCATGAGTTATTAAATCAGC+AGG + Chr5:16137365-16137384 None:intergenic 35.0%
GCATGGAAGTGGAAAAAATA+TGG - Chr5:16131521-16131540 MsG0580025263.01.T01:intron 35.0%
GGATACTATCCACATAAATG+TGG + Chr5:16133455-16133474 None:intergenic 35.0%
GTACTTAAATACAGGAGGAA+AGG - Chr5:16135964-16135983 MsG0580025263.01.T01:intron 35.0%
GTATATGCCAACTGTTCATT+AGG + Chr5:16134585-16134604 None:intergenic 35.0%
TAAACCTGATATCCGAAATC+TGG - Chr5:16132926-16132945 MsG0580025263.01.T01:CDS 35.0%
TAAAGACAGTTCAAGGATAC+TGG - Chr5:16137449-16137468 MsG0580025263.01.T01:intron 35.0%
TAGGGTTACTTACTTAATGG+TGG - Chr5:16137156-16137175 MsG0580025263.01.T01:intron 35.0%
TAGTGCATTGTGTCTCATAT+TGG + Chr5:16135740-16135759 None:intergenic 35.0%
TATAGATCTCATGCAATAGC+AGG + Chr5:16134012-16134031 None:intergenic 35.0%
TATCTCCGTCCTTAAACATA+AGG - Chr5:16133780-16133799 MsG0580025263.01.T01:intron 35.0%
TCACTTAATACGATGTTCTC+TGG - Chr5:16132125-16132144 MsG0580025263.01.T01:intron 35.0%
TCCGGTTATATCTGCTATAT+TGG - Chr5:16137004-16137023 MsG0580025263.01.T01:CDS 35.0%
TCTTCAATGACTACACTGAA+TGG + Chr5:16137085-16137104 None:intergenic 35.0%
TCTTGTGTAATTGGAGAAGA+AGG - Chr5:16133102-16133121 MsG0580025263.01.T01:intron 35.0%
TGGAAGTGGAAAAAATATGG+CGG - Chr5:16131524-16131543 MsG0580025263.01.T01:intron 35.0%
TGTAATTGGAGAAGAAGGTT+TGG - Chr5:16133107-16133126 MsG0580025263.01.T01:intron 35.0%
TGTGGTACTTATAATGTCAC+TGG + Chr5:16132559-16132578 None:intergenic 35.0%
TTAATCTTGACGACTTCTTG+TGG - Chr5:16136725-16136744 MsG0580025263.01.T01:intron 35.0%
TTCTAAATTCTGATCCGATC+TGG - Chr5:16131108-16131127 MsG0580025263.01.T01:CDS 35.0%
TTGAGTGAAGATAAGAGATC+CGG + Chr5:16130924-16130943 None:intergenic 35.0%
TTTACTTCTTTAGCCATTGG+AGG - Chr5:16134984-16135003 MsG0580025263.01.T01:intron 35.0%
TTTCAAGCTCTCTGATAGAA+CGG + Chr5:16138603-16138622 None:intergenic 35.0%
! AACGCTTTTCGATAGTTGAT+CGG + Chr5:16130998-16131017 None:intergenic 35.0%
! AATAACTCTGAGAATGGATC+TGG - Chr5:16136496-16136515 MsG0580025263.01.T01:intron 35.0%
! AATTTTGCATGGGATCTGAT+TGG + Chr5:16134607-16134626 None:intergenic 35.0%
! AGAAGCAAAAGCTAGTCTAT+TGG + Chr5:16138241-16138260 None:intergenic 35.0%
! ATGGCTAGTAATAATGGAAG+TGG + Chr5:16133312-16133331 None:intergenic 35.0%
! GATGTAGGGTACTTAAATAC+AGG - Chr5:16135956-16135975 MsG0580025263.01.T01:intron 35.0%
! GCATCTATAATAAGAGGCAT+CGG + Chr5:16131969-16131988 None:intergenic 35.0%
! TGTGTAATTTTGCATGGAAG+TGG - Chr5:16131510-16131529 MsG0580025263.01.T01:intron 35.0%
! TTTCAAGTATTGTGCAGAAG+AGG - Chr5:16135439-16135458 MsG0580025263.01.T01:intron 35.0%
! TTTTACCTGTTATTGACCCA+TGG - Chr5:16132689-16132708 MsG0580025263.01.T01:intron 35.0%
! TTTTACTAACCACACAAGAG+AGG - Chr5:16136086-16136105 MsG0580025263.01.T01:intron 35.0%
!! CATCTATAATAAGAGGCATC+GGG + Chr5:16131968-16131987 None:intergenic 35.0%
!! CGATATGTTGGTGATATGTT+AGG - Chr5:16135844-16135863 MsG0580025263.01.T01:intron 35.0%
!! GAATTTTCGAAGGAGTATGT+CGG - Chr5:16136554-16136573 MsG0580025263.01.T01:intron 35.0%
!! GTGAGAGTAATATTGGTTTG+TGG - Chr5:16134943-16134962 MsG0580025263.01.T01:intron 35.0%
!! GTGTTCCTTTTAGAAAAGAG+AGG + Chr5:16137712-16137731 None:intergenic 35.0%
!! GTGTTTGATTTGTTAGGCTT+TGG - Chr5:16131142-16131161 MsG0580025263.01.T01:CDS 35.0%
!! GTGTTTTTGAATCTGATTCC+GGG - Chr5:16137045-16137064 MsG0580025263.01.T01:CDS 35.0%
!! TTTGATATTTTGAAAGGCCG+CGG - Chr5:16136834-16136853 MsG0580025263.01.T01:intron 35.0%
!!! AACATTTTTTCATCTGCGGA+AGG + Chr5:16131991-16132010 None:intergenic 35.0%
!!! ACTAATTTTAAAGTGGGACC+TGG + Chr5:16137937-16137956 None:intergenic 35.0%
!!! AGCTCTGTTTGGTCTTATTT+TGG - Chr5:16138622-16138641 MsG0580025263.01.T01:intron 35.0%
!!! CCAAAAACCTGTTTTTGATC+CGG - Chr5:16136986-16137005 MsG0580025263.01.T01:CDS 35.0%
!!! CTAGAACCTTTTTCAGTTTG+CGG + Chr5:16130884-16130903 None:intergenic 35.0%
!!! GCTCTGTTTGGTCTTATTTT+GGG - Chr5:16138623-16138642 MsG0580025263.01.T01:intron 35.0%
!!! TAGAACCTTTTTCAGTTTGC+GGG + Chr5:16130883-16130902 None:intergenic 35.0%
AAAGAACAGATCTTTCCCTG+AGG + Chr5:16135421-16135440 None:intergenic 40.0%
AAATACAGGTTCCAAGGTTG+CGG - Chr5:16138675-16138694 MsG0580025263.01.T01:intron 40.0%
AAATCAGTTGCGTGTTCTTG+TGG - Chr5:16138445-16138464 MsG0580025263.01.T01:intron 40.0%
AAATTTCATTTGCAGCGTGC+TGG - Chr5:16134270-16134289 MsG0580025263.01.T01:intron 40.0%
AACCACACAAGAGAGGAAAA+AGG - Chr5:16136093-16136112 MsG0580025263.01.T01:intron 40.0%
AAGATAGAGCTCTTGTCCTT+GGG - Chr5:16136168-16136187 MsG0580025263.01.T01:intron 40.0%
AAGATCAACAGCAACAAGTG+GGG + Chr5:16136880-16136899 None:intergenic 40.0%
AAGTGGGGTGAGAGTAATAT+TGG - Chr5:16134936-16134955 MsG0580025263.01.T01:intron 40.0%
AATCCTTAGGCCAGAAATGA+TGG - Chr5:16133206-16133225 MsG0580025263.01.T01:CDS 40.0%
AATTCTGATCCGATCTGGTT+CGG - Chr5:16131113-16131132 MsG0580025263.01.T01:CDS 40.0%
ACAACAACAAGAAGAAGAGG+CGG + Chr5:16134864-16134883 None:intergenic 40.0%
ACAACCTCTATCTGGATATG+AGG - Chr5:16138382-16138401 MsG0580025263.01.T01:intron 40.0%
ACCTGTATTTGCTCAAACTC+AGG + Chr5:16138665-16138684 None:intergenic 40.0%
ACTTTCCCGCAAACTGAAAA+AGG - Chr5:16130875-16130894 MsG0580025263.01.T01:three_prime_UTR 40.0%
AGAAAGAGGCCACATTTATG+TGG - Chr5:16133443-16133462 MsG0580025263.01.T01:intron 40.0%
AGAATCTCGAATCGATACAC+CGG - Chr5:16130902-16130921 MsG0580025263.01.T01:three_prime_UTR 40.0%
AGATGATTCTTCACCTGCAT+AGG + Chr5:16134347-16134366 None:intergenic 40.0%
AGCACGCTAAATTATGCAGA+AGG - Chr5:16132184-16132203 MsG0580025263.01.T01:CDS 40.0%
AGGACAAGAGCTCTATCTTA+TGG + Chr5:16136167-16136186 None:intergenic 40.0%
AGGAGAAATCCTTTGTGAAG+GGG + Chr5:16136198-16136217 None:intergenic 40.0%
AGTATTCTCGTCGTAGAAAG+AGG + Chr5:16130955-16130974 None:intergenic 40.0%
AGTCTGCAAAAACACGACAT+AGG + Chr5:16138312-16138331 None:intergenic 40.0%
ATACCAAACCTTATCCCACT+AGG + Chr5:16134077-16134096 None:intergenic 40.0%
ATAGTGCCAGTCTCAAAACA+AGG - Chr5:16133367-16133386 MsG0580025263.01.T01:CDS 40.0%
ATCAAACTAGTCGATCAGCA+AGG + Chr5:16135283-16135302 None:intergenic 40.0%
CACACAACAACAAGAAGAAG+AGG + Chr5:16134867-16134886 None:intergenic 40.0%
CAGGCTGAATGTAGAAAACT+GGG - Chr5:16135344-16135363 MsG0580025263.01.T01:intron 40.0%
CAGTTATCCTAGAGATCACT+TGG + Chr5:16133421-16133440 None:intergenic 40.0%
CATGACCCATTACGATATGT+TGG - Chr5:16135832-16135851 MsG0580025263.01.T01:intron 40.0%
CCAACAGGGTCCTATATTTA+GGG + Chr5:16133716-16133735 None:intergenic 40.0%
CCTAAGCAACACTTTACAGT+TGG + Chr5:16132849-16132868 None:intergenic 40.0%
CGATGTTCTCTGGATTATAG+TGG - Chr5:16132135-16132154 MsG0580025263.01.T01:intron 40.0%
CTAACCAGTACCATCATTTC+TGG + Chr5:16133219-16133238 None:intergenic 40.0%
CTATTGAGATCTGATTGGCA+TGG - Chr5:16134540-16134559 MsG0580025263.01.T01:intron 40.0%
CTGAATCTTCTTTGCTACCA+TGG - Chr5:16135922-16135941 MsG0580025263.01.T01:intron 40.0%
CTGCTCTTTGTAACACACTA+TGG - Chr5:16136781-16136800 MsG0580025263.01.T01:intron 40.0%
CTGGTATCAACAATTGCATC+TGG + Chr5:16136454-16136473 None:intergenic 40.0%
CTTCCAAGTACAAGGAGTTT+AGG + Chr5:16135025-16135044 None:intergenic 40.0%
GAAAGATCAACAGCAACAAG+TGG + Chr5:16136882-16136901 None:intergenic 40.0%
GAAGAAGAAGAAGACGAGAA+TGG - Chr5:16130824-16130843 MsG0580025263.01.T01:three_prime_UTR 40.0%
GAATGAGGTGAATTCACTTG+CGG - Chr5:16131175-16131194 MsG0580025263.01.T01:CDS 40.0%
GATAGGCAATACATAGGAGA+GGG + Chr5:16134835-16134854 None:intergenic 40.0%
GATCATGTCATGTTTCCACA+TGG + Chr5:16138176-16138195 None:intergenic 40.0%
GCTATTATGGAACCCAAGAA+TGG - Chr5:16138758-16138777 MsG0580025263.01.T01:intron 40.0%
GCTATTCAACAACCTCTATC+TGG - Chr5:16138374-16138393 MsG0580025263.01.T01:intron 40.0%
GGAAGTGGAAAAAATATGGC+GGG - Chr5:16131525-16131544 MsG0580025263.01.T01:intron 40.0%
GGATTGTAAAATGCAGGTGA+AGG - Chr5:16131870-16131889 MsG0580025263.01.T01:intron 40.0%
GGGAAAATCGCAATAATCGT+TGG - Chr5:16134657-16134676 MsG0580025263.01.T01:intron 40.0%
GTCTCAAAACAAGGATCACA+AGG - Chr5:16133376-16133395 MsG0580025263.01.T01:CDS 40.0%
TAAGATAGAGCTCTTGTCCT+TGG - Chr5:16136167-16136186 MsG0580025263.01.T01:intron 40.0%
TATATTTAGGGACGGAGAGT+CGG + Chr5:16133704-16133723 None:intergenic 40.0%
TATTTGCTCAAACTCAGGCA+TGG + Chr5:16138660-16138679 None:intergenic 40.0%
TCAAAGATCTGAATCGCGAA+CGG - Chr5:16130794-16130813 MsG0580025263.01.T01:three_prime_UTR 40.0%
TCAGGCTGAATGTAGAAAAC+TGG - Chr5:16135343-16135362 MsG0580025263.01.T01:intron 40.0%
TCATGAGCATGCACTTCAAT+AGG + Chr5:16135817-16135836 None:intergenic 40.0%
TCCGTCCTTAAACATAAGGT+GGG - Chr5:16133784-16133803 MsG0580025263.01.T01:intron 40.0%
TGAGAACTACAACAGCATGA+TGG - Chr5:16136950-16136969 MsG0580025263.01.T01:intron 40.0%
TGGATTGAGAGTCCAGATTT+CGG + Chr5:16132941-16132960 None:intergenic 40.0%
TTACAGGATAGCAAAGGCTT+TGG - Chr5:16132515-16132534 MsG0580025263.01.T01:intron 40.0%
TTCACACATCTGCAACAAGT+AGG + Chr5:16137541-16137560 None:intergenic 40.0%
TTGAGCAAATACAGGTTCCA+AGG - Chr5:16138669-16138688 MsG0580025263.01.T01:intron 40.0%
TTGCTGCTGAGTATGTGAAA+AGG - Chr5:16138405-16138424 MsG0580025263.01.T01:intron 40.0%
TTTGCACAACAAGTGAGAAG+AGG + Chr5:16134789-16134808 None:intergenic 40.0%
! ACGATTATTGCGATTTTCCC+AGG + Chr5:16134657-16134676 None:intergenic 40.0%
! AGAGCTAATGGATATGATGG+CGG - Chr5:16134296-16134315 MsG0580025263.01.T01:intron 40.0%
! ATATTGGCTACCTGCAGAAT+TGG + Chr5:16135724-16135743 None:intergenic 40.0%
! ATCGTAAAAGCTTTTCTCCG+CGG + Chr5:16136854-16136873 None:intergenic 40.0%
! CCGGATCAAAAACAGGTTTT+TGG + Chr5:16136989-16137008 None:intergenic 40.0%
! CTCTCCAATAACTCTGAGAA+TGG - Chr5:16136490-16136509 MsG0580025263.01.T01:intron 40.0%
! GTAGGGTACTTAAATACAGG+AGG - Chr5:16135959-16135978 MsG0580025263.01.T01:intron 40.0%
! GTTCTGGTTAGCACTTAGTT+GGG - Chr5:16132352-16132371 MsG0580025263.01.T01:CDS 40.0%
! TGTTCTGGTTAGCACTTAGT+TGG - Chr5:16132351-16132370 MsG0580025263.01.T01:CDS 40.0%
! TTCCTTTTTCCTCTCTTGTG+TGG + Chr5:16136098-16136117 None:intergenic 40.0%
! TTCTGGTTAGCACTTAGTTG+GGG - Chr5:16132353-16132372 MsG0580025263.01.T01:CDS 40.0%
!! AGCCATTGTTGGTTTGAAAG+AGG - Chr5:16133326-16133345 MsG0580025263.01.T01:CDS 40.0%
!! ATGTTGGTGATATGTTAGGC+TGG - Chr5:16135848-16135867 MsG0580025263.01.T01:intron 40.0%
!! CAAGTGATCTCTAGGATAAC+TGG - Chr5:16133419-16133438 MsG0580025263.01.T01:intron 40.0%
!! CCAACTGTAAAGTGTTGCTT+AGG - Chr5:16132846-16132865 MsG0580025263.01.T01:CDS 40.0%
!! CGGAAGGCATCTATAATAAG+AGG + Chr5:16131975-16131994 None:intergenic 40.0%
!! CTGGATTATAGTGGGTGATT+TGG - Chr5:16132144-16132163 MsG0580025263.01.T01:CDS 40.0%
!! TGTGGCTCCTAGGTTATTTT+TGG - Chr5:16134891-16134910 MsG0580025263.01.T01:intron 40.0%
!! TTGCTTTAGTTCTGAGCTCA+AGG - Chr5:16137405-16137424 MsG0580025263.01.T01:intron 40.0%
!! TTTTGGTTGAAAGGGCTGTA+GGG - Chr5:16134908-16134927 MsG0580025263.01.T01:intron 40.0%
!!! ATGGTTTTATCGTGCCCATT+TGG - Chr5:16137901-16137920 MsG0580025263.01.T01:intron 40.0%
!!! TGTGATCCTTGTTTTGAGAC+TGG + Chr5:16133376-16133395 None:intergenic 40.0%
!!! TTTTTGGTTGAAAGGGCTGT+AGG - Chr5:16134907-16134926 MsG0580025263.01.T01:intron 40.0%
AAGAAGGTTTGGCAGATGTC+TGG - Chr5:16133118-16133137 MsG0580025263.01.T01:intron 45.0%
AAGAGGAATTACCAGTTGCG+CGG + Chr5:16131060-16131079 None:intergenic 45.0%
AAGTTCTCGTTCAGATGCCA+AGG + Chr5:16136413-16136432 None:intergenic 45.0%
AATAGGGGGTAGAAAGATGC+TGG + Chr5:16136254-16136273 None:intergenic 45.0%
ACAAGTGAGAAGAGGAACTG+AGG + Chr5:16134781-16134800 None:intergenic 45.0%
ACATGTGTGTGCGTATCACA+TGG + Chr5:16134409-16134428 None:intergenic 45.0%
ACTAAGCACACACTACAGAC+TGG + Chr5:16132071-16132090 None:intergenic 45.0%
AGAAGAGGCGGAATTTGGAT+AGG + Chr5:16134852-16134871 None:intergenic 45.0%
AGAAGGTTTGGCAGATGTCT+GGG - Chr5:16133119-16133138 MsG0580025263.01.T01:intron 45.0%
AGATCAACAGCAACAAGTGG+GGG + Chr5:16136879-16136898 None:intergenic 45.0%
AGGGAGAGAGAAAGTTGCAT+AGG + Chr5:16134816-16134835 None:intergenic 45.0%
ATACAACCCAATGCCTCCAA+TGG + Chr5:16135000-16135019 None:intergenic 45.0%
ATAGGGGGTAGAAAGATGCT+GGG + Chr5:16136253-16136272 None:intergenic 45.0%
ATGGATGGTGCACCATCTAA+TGG - Chr5:16135573-16135592 MsG0580025263.01.T01:intron 45.0%
ATGTATTTAGTGCGAGGTGC+TGG - Chr5:16132268-16132287 MsG0580025263.01.T01:CDS 45.0%
CAAACCTTATCCCACTAGGT+GGG + Chr5:16134073-16134092 None:intergenic 45.0%
CAAGAAGAAGAGGCGGAATT+TGG + Chr5:16134857-16134876 None:intergenic 45.0%
CACATCAAACCGAACCAGAT+CGG + Chr5:16131125-16131144 None:intergenic 45.0%
CAGGGTCCTATATTTAGGGA+CGG + Chr5:16133712-16133731 None:intergenic 45.0%
CCCCACCTTATGTTTAAGGA+CGG + Chr5:16133788-16133807 None:intergenic 45.0%
CCCTAAATATAGGACCCTGT+TGG - Chr5:16133713-16133732 MsG0580025263.01.T01:intron 45.0%
CCGTCCTTAAACATAAGGTG+GGG - Chr5:16133785-16133804 MsG0580025263.01.T01:intron 45.0%
CGATAGTTGATCGGAGGTTA+CGG + Chr5:16130989-16131008 None:intergenic 45.0%
CTAAGCACACACTACAGACT+GGG + Chr5:16132070-16132089 None:intergenic 45.0%
CTAGGATAACTGGCAGAAAG+AGG - Chr5:16133429-16133448 MsG0580025263.01.T01:intron 45.0%
CTCCGTCCTTAAACATAAGG+TGG - Chr5:16133783-16133802 MsG0580025263.01.T01:intron 45.0%
CTTGCAACCAAGTGATCTCT+AGG - Chr5:16133411-16133430 MsG0580025263.01.T01:intron 45.0%
GACACTGACAATCCAGAAGT+TGG - Chr5:16135368-16135387 MsG0580025263.01.T01:intron 45.0%
GACTCTCCGTCCCTAAATAT+AGG - Chr5:16133703-16133722 MsG0580025263.01.T01:intron 45.0%
GAGAGCTTGAAAGCTCTGTT+TGG - Chr5:16138611-16138630 MsG0580025263.01.T01:intron 45.0%
GAGTCCAGATTTCGGATATC+AGG + Chr5:16132933-16132952 None:intergenic 45.0%
GCAACCTCATATCCAGATAG+AGG + Chr5:16138389-16138408 None:intergenic 45.0%
GCCAACAGGGTCCTATATTT+AGG + Chr5:16133717-16133736 None:intergenic 45.0%
GCCTGAGTTTGAGCAAATAC+AGG - Chr5:16138661-16138680 MsG0580025263.01.T01:intron 45.0%
GCTGAGTATGTGAAAAGGCT+TGG - Chr5:16138410-16138429 MsG0580025263.01.T01:intron 45.0%
GGATAGGCAATACATAGGAG+AGG + Chr5:16134836-16134855 None:intergenic 45.0%
GGATCTGGATAGCCATTCTT+GGG + Chr5:16138773-16138792 None:intergenic 45.0%
GGGAGAGAGAAAGTTGCATA+GGG + Chr5:16134815-16134834 None:intergenic 45.0%
GTTAGCACTTAGTTGGGGTT+AGG - Chr5:16132358-16132377 MsG0580025263.01.T01:CDS 45.0%
GTTGCTTAGGACACATCATC+AGG - Chr5:16132859-16132878 MsG0580025263.01.T01:CDS 45.0%
TAGCATGTTAGAGCTGAGTG+TGG - Chr5:16132222-16132241 MsG0580025263.01.T01:CDS 45.0%
TAGGCCAGAAATGATGGTAC+TGG - Chr5:16133212-16133231 MsG0580025263.01.T01:CDS 45.0%
TCATGCAATAGCAGGGTACA+GGG + Chr5:16134004-16134023 None:intergenic 45.0%
TCCTAAAATCGCTGTTCAGG+TGG + Chr5:16133251-16133270 None:intergenic 45.0%
TGCATGAGATCTATAGCACC+AGG - Chr5:16134017-16134036 MsG0580025263.01.T01:CDS 45.0%
TGGCCTAAACTCCTTGTACT+TGG - Chr5:16135019-16135038 MsG0580025263.01.T01:intron 45.0%
TTAGAGCTGAGTGTGGTTTG+TGG - Chr5:16132229-16132248 MsG0580025263.01.T01:CDS 45.0%
TTTGGATAGCGTGGAGAATG+AGG - Chr5:16131160-16131179 MsG0580025263.01.T01:CDS 45.0%
TTTGTGAAGGGGAAAACCCA+AGG + Chr5:16136187-16136206 None:intergenic 45.0%
! CTTTACATCTAGGTGGGTTC+AGG - Chr5:16135325-16135344 MsG0580025263.01.T01:intron 45.0%
! GCAGCTGTGTCTATTTCTTC+TGG - Chr5:16134114-16134133 MsG0580025263.01.T01:intron 45.0%
! GCTGTGATAGGTGCGATTTT+TGG - Chr5:16131201-16131220 MsG0580025263.01.T01:CDS 45.0%
! GCTTTTCGATAGTTGATCGG+AGG + Chr5:16130995-16131014 None:intergenic 45.0%
! GTCTGAAGCTTCTATAGGTG+TGG - Chr5:16138697-16138716 MsG0580025263.01.T01:intron 45.0%
! TAAGTGGTAGTTCTGCTAGC+TGG - Chr5:16132988-16133007 MsG0580025263.01.T01:CDS 45.0%
! TCCACCTGAACAGCGATTTT+AGG - Chr5:16133247-16133266 MsG0580025263.01.T01:CDS 45.0%
! TCTTTAGCCATTGGAGGCAT+TGG - Chr5:16134990-16135009 MsG0580025263.01.T01:intron 45.0%
! TTCTTGTTTGAGCCTCTCTG+TGG + Chr5:16132577-16132596 None:intergenic 45.0%
! TTGCGGTCTGAAGCTTCTAT+AGG - Chr5:16138692-16138711 MsG0580025263.01.T01:intron 45.0%
! TTGGAGAGTTGCTTTGCTGT+TGG + Chr5:16136478-16136497 None:intergenic 45.0%
! TTGGGTTTTCCCCTTCACAA+AGG - Chr5:16136186-16136205 MsG0580025263.01.T01:intron 45.0%
!! ATGATGGCGGTGTATCAAGA+AGG - Chr5:16134309-16134328 MsG0580025263.01.T01:intron 45.0%
!! ATTGGAGGCATTGGGTTGTA+TGG - Chr5:16134999-16135018 MsG0580025263.01.T01:intron 45.0%
!! CTTGTTGTTGTGTGAGAGTG+TGG - Chr5:16134873-16134892 MsG0580025263.01.T01:intron 45.0%
!! CTTTAGCCATTGGAGGCATT+GGG - Chr5:16134991-16135010 MsG0580025263.01.T01:intron 45.0%
!! GTACCATCATTTCTGGCCTA+AGG + Chr5:16133212-16133231 None:intergenic 45.0%
!! TTATTTCTGCTTGCAGGCCT+TGG - Chr5:16136393-16136412 MsG0580025263.01.T01:intron 45.0%
!! TTGTTAGGCTTTGGATAGCG+TGG - Chr5:16131151-16131170 MsG0580025263.01.T01:CDS 45.0%
!! ATAAATAAATAAATAAATAG+GGG + Chr5:16136269-16136288 None:intergenic 5.0%
AAGCTCTCTGATAGAACGGC+TGG + Chr5:16138599-16138618 None:intergenic 50.0%
AAGCTTCTATAGGTGTGGCC+AGG - Chr5:16138702-16138721 MsG0580025263.01.T01:intron 50.0%
AAGGACGGGGACAATGAAGT+TGG - Chr5:16138542-16138561 MsG0580025263.01.T01:intron 50.0%
AGAATGGCTATCCAGATCCC+AGG - Chr5:16138774-16138793 MsG0580025263.01.T01:CDS 50.0%
AGCATGATGGTTCCTGCTTC+TGG - Chr5:16136963-16136982 MsG0580025263.01.T01:CDS 50.0%
AGGTAGTCAATCCCACCTAG+TGG - Chr5:16134059-16134078 MsG0580025263.01.T01:CDS 50.0%
ATAAGCTTCACCCAGTGACC+TGG + Chr5:16138723-16138742 None:intergenic 50.0%
ATTGAGTCGGTGAAATCGCC+TGG - Chr5:16134636-16134655 MsG0580025263.01.T01:intron 50.0%
CAATAGCAGGGTACAGGGAA+GGG + Chr5:16133999-16134018 None:intergenic 50.0%
CAATCCCACCTAGTGGGATA+AGG - Chr5:16134066-16134085 MsG0580025263.01.T01:CDS 50.0%
CACTTGCGGAATGCTGTGAT+AGG - Chr5:16131189-16131208 MsG0580025263.01.T01:CDS 50.0%
CAGAGCCATGGGTCAATAAC+AGG + Chr5:16132697-16132716 None:intergenic 50.0%
CCAAACCTTATCCCACTAGG+TGG + Chr5:16134074-16134093 None:intergenic 50.0%
CCACCTAGTGGGATAAGGTT+TGG - Chr5:16134071-16134090 MsG0580025263.01.T01:CDS 50.0%
CTCATGCAATAGCAGGGTAC+AGG + Chr5:16134005-16134024 None:intergenic 50.0%
CTGGACTCATGCAGCCAAAT+GGG + Chr5:16137918-16137937 None:intergenic 50.0%
GAAGACGAGAATGGGAACGA+CGG - Chr5:16130833-16130852 MsG0580025263.01.T01:three_prime_UTR 50.0%
GAATGGCTATCCAGATCCCA+GGG - Chr5:16138775-16138794 MsG0580025263.01.T01:CDS 50.0%
GATGTGTGAACAAGCAGCAG+AGG - Chr5:16137551-16137570 MsG0580025263.01.T01:intron 50.0%
GCATGCACTTCAATAGGTCG+AGG + Chr5:16135811-16135830 None:intergenic 50.0%
GGAGCCCCACCTTATGTTTA+AGG + Chr5:16133792-16133811 None:intergenic 50.0%
GGGATCTGGATAGCCATTCT+TGG + Chr5:16138774-16138793 None:intergenic 50.0%
GGTAGTCAATCCCACCTAGT+GGG - Chr5:16134060-16134079 MsG0580025263.01.T01:CDS 50.0%
TGAGGCAAAACTTGCGCACA+AGG + Chr5:16134763-16134782 None:intergenic 50.0%
TGTCTTCCAGTTCAGCCAGT+GGG + Chr5:16138571-16138590 None:intergenic 50.0%
TGTTGATCTTTCTCCTCCCC+CGG - Chr5:16136890-16136909 MsG0580025263.01.T01:intron 50.0%
TTATCAGCTCTCCCCTGAAG+AGG - Chr5:16132647-16132666 MsG0580025263.01.T01:CDS 50.0%
TTCAGAAGCTCGCCAACTTC+TGG + Chr5:16135383-16135402 None:intergenic 50.0%
TTCAGTTTGCGGGAAAGTCC+CGG + Chr5:16130873-16130892 None:intergenic 50.0%
TTGAGTCGGTGAAATCGCCT+GGG - Chr5:16134637-16134656 MsG0580025263.01.T01:intron 50.0%
! AAAATGGTGGGACCCTTTCC+CGG - Chr5:16138056-16138075 MsG0580025263.01.T01:intron 50.0%
! CCAGTGATGATGAAGCAGTG+CGG + Chr5:16137680-16137699 None:intergenic 50.0%
! TATGTTAGGCTGGCTGCATC+AGG - Chr5:16135858-16135877 MsG0580025263.01.T01:intron 50.0%
!! CAATGAAGTTGGTACCCCAC+TGG - Chr5:16138553-16138572 MsG0580025263.01.T01:intron 50.0%
!! GAGTTGCTTTGCTGTTGGTC+TGG + Chr5:16136473-16136492 None:intergenic 50.0%
!! GCGTGCTGGTTTAGAGCTAA+TGG - Chr5:16134284-16134303 MsG0580025263.01.T01:intron 50.0%
!!! ACAGGTTTTTGGCCAGAAGC+AGG + Chr5:16136978-16136997 None:intergenic 50.0%
AAACAGCTGTGCGCTACCTC+AGG - Chr5:16135402-16135421 MsG0580025263.01.T01:intron 55.0%
AACAGCTGTGCGCTACCTCA+GGG - Chr5:16135403-16135422 MsG0580025263.01.T01:intron 55.0%
ACACTCCTTCTCGTACAGCC+GGG + Chr5:16136911-16136930 None:intergenic 55.0%
AGGGCTGTAGGGTTGGAAAG+TGG - Chr5:16134919-16134938 MsG0580025263.01.T01:intron 55.0%
ATAGGTGTGGCCAGGTCACT+GGG - Chr5:16138710-16138729 MsG0580025263.01.T01:intron 55.0%
ATTCCGCTTGGCGCATACAC+AGG + Chr5:16138084-16138103 None:intergenic 55.0%
CATACACAGGGTCCGGGAAA+GGG + Chr5:16138071-16138090 None:intergenic 55.0%
CCATTTGGCTGCATGAGTCC+AGG - Chr5:16137916-16137935 MsG0580025263.01.T01:intron 55.0%
CCGCACTGCTTCATCATCAC+TGG - Chr5:16137677-16137696 MsG0580025263.01.T01:intron 55.0%
CCTGGACTCATGCAGCCAAA+TGG + Chr5:16137919-16137938 None:intergenic 55.0%
GAAGCTTCAGACCGCAACCT+TGG + Chr5:16138689-16138708 None:intergenic 55.0%
GACACTCCTTCTCGTACAGC+CGG + Chr5:16136912-16136931 None:intergenic 55.0%
GAGCTTATGAGCGCCTATGC+AGG - Chr5:16134331-16134350 MsG0580025263.01.T01:intron 55.0%
GCAATAGCAGGGTACAGGGA+AGG + Chr5:16134000-16134019 None:intergenic 55.0%
GCGCACAAGTCAAAGGGAGT+TGG - Chr5:16137573-16137592 MsG0580025263.01.T01:intron 55.0%
GGCAAAACTTGCGCACAAGG+TGG + Chr5:16134760-16134779 None:intergenic 55.0%
GGCTGTAGGGTTGGAAAGTG+GGG - Chr5:16134921-16134940 MsG0580025263.01.T01:intron 55.0%
GGGCTGTAGGGTTGGAAAGT+GGG - Chr5:16134920-16134939 MsG0580025263.01.T01:intron 55.0%
GGTTGAAAGGGCTGTAGGGT+TGG - Chr5:16134912-16134931 MsG0580025263.01.T01:intron 55.0%
GTCTTCCAGTTCAGCCAGTG+GGG + Chr5:16138570-16138589 None:intergenic 55.0%
GTGTCTTCCAGTTCAGCCAG+TGG + Chr5:16138572-16138591 None:intergenic 55.0%
TATAGGTGTGGCCAGGTCAC+TGG - Chr5:16138709-16138728 MsG0580025263.01.T01:intron 55.0%
TTCCGCTTGGCGCATACACA+GGG + Chr5:16138083-16138102 None:intergenic 55.0%
! AGCAGAGGCGCACAAGTCAA+AGG - Chr5:16137566-16137585 MsG0580025263.01.T01:intron 55.0%
! ATAGGTCGAGGCATTCCACC+AGG + Chr5:16135799-16135818 None:intergenic 55.0%
! GCAGAGGCGCACAAGTCAAA+GGG - Chr5:16137567-16137586 MsG0580025263.01.T01:intron 55.0%
! GGGAAAGGGTCCCACCATTT+TGG + Chr5:16138057-16138076 None:intergenic 55.0%
! GGGCTCCGCTTGCTGAATTA+CGG - Chr5:16133805-16133824 MsG0580025263.01.T01:intron 55.0%
! GGTAGTTCTGCTAGCTGGAC+TGG - Chr5:16132993-16133012 MsG0580025263.01.T01:CDS 55.0%
! TGTGTGAGAGTGTGGCTCCT+AGG - Chr5:16134881-16134900 MsG0580025263.01.T01:intron 55.0%
ACTCCTTCTCGTACAGCCGG+GGG + Chr5:16136909-16136928 None:intergenic 60.0%
AGAATGGGAACGACGGTGGC+GGG - Chr5:16130840-16130859 MsG0580025263.01.T01:three_prime_UTR 60.0%
CACTCCTTCTCGTACAGCCG+GGG + Chr5:16136910-16136929 None:intergenic 60.0%
CTATCCAGATCCCAGGGCGT+TGG - Chr5:16138781-16138800 MsG0580025263.01.T01:CDS 60.0%
CTTGGCGCATACACAGGGTC+CGG + Chr5:16138078-16138097 None:intergenic 60.0%
GACCCTGTGTATGCGCCAAG+CGG - Chr5:16138078-16138097 MsG0580025263.01.T01:intron 60.0%
GACGAGAATGGGAACGACGG+TGG - Chr5:16130836-16130855 MsG0580025263.01.T01:three_prime_UTR 60.0%
GAGAATGGGAACGACGGTGG+CGG - Chr5:16130839-16130858 MsG0580025263.01.T01:three_prime_UTR 60.0%
GCATACACAGGGTCCGGGAA+AGG + Chr5:16138072-16138091 None:intergenic 60.0%
GCATTCCACCAGGTCCTCCA+CGG + Chr5:16135789-16135808 None:intergenic 60.0%
TTGGCGCATACACAGGGTCC+GGG + Chr5:16138077-16138096 None:intergenic 60.0%
! TGGTACCCCACTGGCTGAAC+TGG - Chr5:16138562-16138581 MsG0580025263.01.T01:intron 60.0%
CGGAGGTTACGGCGAGCTTG+AGG + Chr5:16130978-16130997 None:intergenic 65.0%
CTTGCCAACGCCCTGGGATC+TGG + Chr5:16138788-16138807 None:intergenic 65.0%
GGATGCCTTGCCAACGCCCT+GGG + Chr5:16138794-16138813 None:intergenic 65.0%
TGCTTCGCATGCCGCGCAAC+TGG - Chr5:16131046-16131065 MsG0580025263.01.T01:CDS 65.0%
!! CAGATCCCAGGGCGTTGGCA+AGG - Chr5:16138786-16138805 MsG0580025263.01.T01:CDS 65.0%
CCTCCCCCGGCTGTACGAGA+AGG - Chr5:16136903-16136922 MsG0580025263.01.T01:intron 70.0%
CCTTCTCGTACAGCCGGGGG+AGG + Chr5:16136906-16136925 None:intergenic 70.0%
GGGATGCCTTGCCAACGCCC+TGG + Chr5:16138795-16138814 None:intergenic 70.0%
!! ACGGTGGCGGGTCTAGCGCC+GGG - Chr5:16130852-16130871 MsG0580025263.01.T01:three_prime_UTR 75.0%
!! GACGGTGGCGGGTCTAGCGC+CGG - Chr5:16130851-16130870 MsG0580025263.01.T01:three_prime_UTR 75.0%
Chromosome Type Strat End Strand Name
Chr5 gene 16130788 16139049 16130788 ID=MsG0580025263.01;Name=MsG0580025263.01
Chr5 mRNA 16130788 16139049 16130788 ID=MsG0580025263.01.T01;Parent=MsG0580025263.01;Name=MsG0580025263.01.T01;_AED=0.35;_eAED=0.39;_QI=55|0.72|0.66|1|1|1|12|202|741
Chr5 exon 16130788 16131508 16130788 ID=MsG0580025263.01.T01:exon:20581;Parent=MsG0580025263.01.T01
Chr5 exon 16132139 16132379 16132139 ID=MsG0580025263.01.T01:exon:20580;Parent=MsG0580025263.01.T01
Chr5 exon 16132599 16132678 16132599 ID=MsG0580025263.01.T01:exon:20579;Parent=MsG0580025263.01.T01
Chr5 exon 16132797 16133074 16132797 ID=MsG0580025263.01.T01:exon:20578;Parent=MsG0580025263.01.T01
Chr5 exon 16133194 16133428 16133194 ID=MsG0580025263.01.T01:exon:20577;Parent=MsG0580025263.01.T01
Chr5 exon 16133958 16134104 16133958 ID=MsG0580025263.01.T01:exon:20576;Parent=MsG0580025263.01.T01
Chr5 exon 16134377 16134500 16134377 ID=MsG0580025263.01.T01:exon:20575;Parent=MsG0580025263.01.T01
Chr5 exon 16135485 16135552 16135485 ID=MsG0580025263.01.T01:exon:20574;Parent=MsG0580025263.01.T01
Chr5 exon 16136957 16137064 16136957 ID=MsG0580025263.01.T01:exon:20573;Parent=MsG0580025263.01.T01
Chr5 exon 16137169 16137316 16137169 ID=MsG0580025263.01.T01:exon:20572;Parent=MsG0580025263.01.T01
Chr5 exon 16138627 16138679 16138627 ID=MsG0580025263.01.T01:exon:20571;Parent=MsG0580025263.01.T01
Chr5 exon 16138770 16139049 16138770 ID=MsG0580025263.01.T01:exon:20570;Parent=MsG0580025263.01.T01
Chr5 five_prime_UTR 16138995 16139049 16138995 ID=MsG0580025263.01.T01:five_prime_utr;Parent=MsG0580025263.01.T01
Chr5 CDS 16138770 16138994 16138770 ID=MsG0580025263.01.T01:cds;Parent=MsG0580025263.01.T01
Chr5 CDS 16138627 16138679 16138627 ID=MsG0580025263.01.T01:cds;Parent=MsG0580025263.01.T01
Chr5 CDS 16137169 16137316 16137169 ID=MsG0580025263.01.T01:cds;Parent=MsG0580025263.01.T01
Chr5 CDS 16136957 16137064 16136957 ID=MsG0580025263.01.T01:cds;Parent=MsG0580025263.01.T01
Chr5 CDS 16135485 16135552 16135485 ID=MsG0580025263.01.T01:cds;Parent=MsG0580025263.01.T01
Chr5 CDS 16134377 16134500 16134377 ID=MsG0580025263.01.T01:cds;Parent=MsG0580025263.01.T01
Chr5 CDS 16133958 16134104 16133958 ID=MsG0580025263.01.T01:cds;Parent=MsG0580025263.01.T01
Chr5 CDS 16133194 16133428 16133194 ID=MsG0580025263.01.T01:cds;Parent=MsG0580025263.01.T01
Chr5 CDS 16132797 16133074 16132797 ID=MsG0580025263.01.T01:cds;Parent=MsG0580025263.01.T01
Chr5 CDS 16132599 16132678 16132599 ID=MsG0580025263.01.T01:cds;Parent=MsG0580025263.01.T01
Chr5 CDS 16132139 16132379 16132139 ID=MsG0580025263.01.T01:cds;Parent=MsG0580025263.01.T01
Chr5 CDS 16130990 16131508 16130990 ID=MsG0580025263.01.T01:cds;Parent=MsG0580025263.01.T01
Chr5 three_prime_UTR 16130788 16130989 16130788 ID=MsG0580025263.01.T01:three_prime_utr;Parent=MsG0580025263.01.T01
Gene Sequence

>MsG0580025263.01.T01

ATGGGAACGACGGTGGCGGGTCTAGCGCCGGGACTTTCCCGCAAACTGAAAAAGGTTCTAGAATCTCGAATCGATACACCGGATCTCTTATCTTCACTCAACACTCTCTCCTCTTTCTACGACGAGAATACTCCTCAAGCTCGCCGTAACCTCCGATCAACTATCGAAAAGCGTTCTCTCTCCATTAATCACGAGTTTCTCGATGCTTCGCATGCCGCGCAACTGGCTTTGGATAGCGTGGAGAATGAGGTGAATTCACTTGCGGAATGCTGTGATAGGATAGCAAAGGCTTTGGACAGTTGTAGTGCTAGCACCAGTGACATTATAAGTACCACAGAGAGGCTCAAACAAGAACTTGAAACTACTACGCAAAGACAAGAGATTGTGACATGTTTCTTGCGTGATTATCAGCTCTCCCCTGAAGAGATAAATGCACTTAGAGACGAAGATCTGAATGAAAACTTTTTCAAGGCACTATCTCATGTGCAAGAGATTCACGCCAACTGTAAAGTGTTGCTTAGGACACATCATCAGCGTGCTGGTTTAGAGCTAATGGATATGATGGCGGTGTATCAAGAAGGAGCTTATGAGCGCCTATGCAGGTGGGTTCAGGCTGAATGTAGAAAACTGGGTGACACTGACAATCCAGAAGTTGGCGAGCTTCTGAAAACAGCTGTGCGCTACCTCAGGGAAAGATCTGTTCTTTTCAAGTATTGTGCAGAAGAGGTAGCCAATATGAGACACAATGCACTATTTAGACGATTTATAAGTGCTCTTACACGTGGAGGACCTGGTGGAATGCCTCGACCTATTGAAGTGCATGCTCATGACCCATTACGATATGTTGGTGATATGTTAGGCTGGCTGCATCAGGCCTTGGCATCTGAACGAGAACTTGTACTTGTATTACTTGATCCAGATGCAATTGTTGATACCAGACCAACAGCAAAGCAACTCTCCAATAACTCTGAGAATGGATCTGGCAAGACAGAAATTGACTTGATGTTTGTTCTTGATAGAATTTTCGAAGGAGTATGTCGGCCGTTTAAAGTGAGAGTTGAACAAGTTTTACAGTCACAACCAAGTCTTATAGTCTCCTATAAACTCAATTTACTTGGGCAAGAAACTGCTCTTTGTAACACACTATGGTCGCTGAAAGATGCTGCTCAGAAAACATTTTTTGATATTTTGAAAGGCCGCGGAGAAAAGCTTTTACGATATCCCCCACTTGTTGCTGTTGATCTTTCTCCTCCCCCGGCTGTACGAGAAGGAGTGTCTGTACTTCTTGAAATAATTGAGAACTACAACAGCATGATGGTTCCTGCTTCTGGCCAAAAACCTGTTTTTGATCCGGTTATATCTGCTATATTGGATCCAATAATTCAGGGTTACTTACTTAATGGTGGTTTTGAAAATCTTTATTCTCAACTTGGTAGCTATCTAGATGATGCAAAATATCTGCAAAGTTCAAGGATACTGGCTATTCATTTTAGAAGTCAACTGGCTGTATTTTCAATGAAATCAGAGGATATCATAGCTTTTGCTTCCTACTTGTTGCAGATGTGTGAACAAGCAGCAGAGGCGCACAAGTCAAAGGGAGTTGGAAACTCATCAAGAAGAAGTAGGATGAGCTCCGACTCTAGTCAACTAACTAAATCATCAGTTGACGCAATCTTGTCAAATAGCCGCACTGCTTCATCATCACTGACTAGTGAGACACCCTCAAAGATTTTTCTCATTAACTGCTTGAGTGCTATTCAACAACCTCTATCTGGATATGAGGTTGCTGCTGAGTATGTGAAAAGGCTTGGAACAATGATAGAAAATCAGTTGCGTGTTCTTGTGGAGAAAGAAGCTGATGCAATCTTGAGTAGATGTAATTTATCAGAAAAGATGCCCCACTTCCATAATTCAATTCATAAGGACGGGGACAATGAAGTTGGTACCCCACTGGCTGAACTGGAAGACACAAGTCCAGCCGTTCTATCAGAGAGCTTGAAAGCTCTGTTTGGTCTTATTTTGGGAAGTGAAAGTTCCATGCCTGAGTTTGAGCAAATACAGGTTCCAAGGTTGCGGTCTGAAGCTTCTATAGGTGTGGCCAGGTCACTGGGTGAAGCTTATGAGCTTATTTATAAGGCTATTATGGAACCCAAGAATGGCTATCCAGATCCCAGGGCGTTGGCAAGGCATCCCCCCAATCAGATAAGAACTATATTAGGGATATAA
Protein sequence

>MsG0580025263.01.T01

MGTTVAGLAPGLSRKLKKVLESRIDTPDLLSSLNTLSSFYDENTPQARRNLRSTIEKRSLSINHEFLDASHAAQLALDSVENEVNSLAECCDRIAKALDSCSASTSDIISTTERLKQELETTTQRQEIVTCFLRDYQLSPEEINALRDEDLNENFFKALSHVQEIHANCKVLLRTHHQRAGLELMDMMAVYQEGAYERLCRWVQAECRKLGDTDNPEVGELLKTAVRYLRERSVLFKYCAEEVANMRHNALFRRFISALTRGGPGGMPRPIEVHAHDPLRYVGDMLGWLHQALASERELVLVLLDPDAIVDTRPTAKQLSNNSENGSGKTEIDLMFVLDRIFEGVCRPFKVRVEQVLQSQPSLIVSYKLNLLGQETALCNTLWSLKDAAQKTFFDILKGRGEKLLRYPPLVAVDLSPPPAVREGVSVLLEIIENYNSMMVPASGQKPVFDPVISAILDPIIQGYLLNGGFENLYSQLGSYLDDAKYLQSSRILAIHFRSQLAVFSMKSEDIIAFASYLLQMCEQAAEAHKSKGVGNSSRRSRMSSDSSQLTKSSVDAILSNSRTASSSLTSETPSKIFLINCLSAIQQPLSGYEVAAEYVKRLGTMIENQLRVLVEKEADAILSRCNLSEKMPHFHNSIHKDGDNEVGTPLAELEDTSPAVLSESLKALFGLILGSESSMPEFEQIQVPRLRSEASIGVARSLGEAYELIYKAIMEPKNGYPDPRALARHPPNQIRTILGI*