AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580025311.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580025311.01.T01 MTR_5g026210 79.828 699 27 4 7 640 1 650 0.0 1119
MsG0580025311.01.T01 MTR_5g026210 81.046 459 22 3 7 400 1 459 0.0 744
MsG0580025311.01.T01 MTR_5g026210 97.959 294 6 0 7 300 1 294 0.0 600
MsG0580025311.01.T01 MTR_5g026210 91.925 161 7 1 295 449 354 514 3.70e-101 318
MsG0580025311.01.T01 MTR_7g077410 40.294 680 268 11 47 640 73 700 4.07e-151 453
MsG0580025311.01.T01 MTR_4g045667 38.000 300 137 3 298 597 152 402 4.54e-64 219
MsG0580025311.01.T01 MTR_4g045667 40.260 77 46 0 223 299 12 88 7.18e-16 81.3
MsG0580025311.01.T01 MTR_2g089030 35.088 342 168 4 298 634 225 517 5.88e-60 211
MsG0580025311.01.T01 MTR_5g013640 33.138 341 166 7 298 634 226 508 2.83e-50 183
MsG0580025311.01.T01 MTR_5g013620 33.138 341 166 7 298 634 228 510 3.89e-50 183
MsG0580025311.01.T01 MTR_6g477780 33.000 300 149 6 298 594 57 307 3.60e-48 174
MsG0580025311.01.T01 MTR_4g099110 32.831 332 171 6 298 627 217 498 9.72e-48 176
MsG0580025311.01.T01 MTR_4g099110 31.532 111 73 2 192 300 45 154 8.17e-11 65.5
MsG0580025311.01.T01 MTR_2g020240 28.713 303 159 6 284 578 63 316 6.29e-34 134
MsG0580025311.01.T01 MTR_2g020240 28.713 303 159 6 284 578 198 451 2.33e-33 135
MsG0580025311.01.T01 MTR_8g099775 29.747 316 167 7 298 607 218 484 1.07e-30 127
MsG0580025311.01.T01 MTR_1g021990 51.351 74 35 1 56 128 14 87 2.34e-14 73.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580025311.01.T01 AT5G45300 59.767 343 88 2 295 636 391 684 2.85e-137 417
MsG0580025311.01.T01 AT5G45300 57.911 316 97 5 19 300 18 331 1.85e-101 324
MsG0580025311.01.T01 AT5G45300 59.767 343 88 2 295 636 389 682 3.44e-137 417
MsG0580025311.01.T01 AT5G45300 66.525 236 76 2 66 300 96 329 5.62e-100 320
MsG0580025311.01.T01 AT5G45300 59.767 343 88 2 295 636 405 698 6.25e-137 417
MsG0580025311.01.T01 AT5G45300 57.911 316 97 5 19 300 32 345 2.34e-101 324
MsG0580025311.01.T01 AT4G00490 47.262 347 129 4 298 640 234 530 9.33e-108 336
MsG0580025311.01.T01 AT4G00490 47.475 99 52 0 202 300 73 171 1.82e-22 102
MsG0580025311.01.T01 AT2G45880 45.954 346 133 4 298 639 387 682 1.05e-100 322
MsG0580025311.01.T01 AT2G32290 36.950 341 162 5 298 634 217 508 2.79e-65 225
MsG0580025311.01.T01 AT2G32290 41.111 90 53 0 217 306 71 160 3.14e-12 70.1
MsG0580025311.01.T01 AT4G15210 36.789 299 140 3 298 596 154 403 9.25e-59 203
MsG0580025311.01.T01 AT4G15210 41.026 78 45 1 223 299 13 90 2.69e-13 72.8
MsG0580025311.01.T01 AT4G15210 35.873 315 148 4 298 607 101 366 1.50e-58 203
MsG0580025311.01.T01 AT4G15210 35.873 315 148 4 298 607 101 366 1.50e-58 203
MsG0580025311.01.T01 AT4G15210 35.873 315 148 4 298 607 154 419 2.40e-58 204
MsG0580025311.01.T01 AT4G15210 41.026 78 45 1 223 299 13 90 2.23e-13 73.6
MsG0580025311.01.T01 AT4G17090 34.911 338 165 8 298 632 225 510 1.50e-54 195
MsG0580025311.01.T01 AT3G23920 33.634 333 159 9 298 619 245 526 1.84e-49 182
MsG0580025311.01.T01 AT5G55700 32.410 361 196 8 250 607 26 341 1.43e-44 163
MsG0580025311.01.T01 AT5G55700 33.866 313 161 7 298 607 235 504 1.49e-42 161
MsG0580025311.01.T01 AT5G18670 29.102 323 172 8 295 616 218 484 6.76e-29 121

Find 189 sgRNAs with CRISPR-Local

Find 459 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCTGGTATTGGTGAGTTTC+AGG 0.176787 5:-16825536 MsG0580025311.01.T01:intron
AGTTGAGAAAAGGGTAAATT+TGG 0.178113 5:-16824214 MsG0580025311.01.T01:CDS
GGCTTCGCCGCCACGGCGGC+GGG 0.187111 5:-16828709 MsG0580025311.01.T01:CDS
AACAACACCATCAATATTTA+AGG 0.189592 5:+16826793 None:intergenic
CCGGTGATCAGGATCATTTC+TGG 0.208369 5:+16822829 None:intergenic
CAATATTTAAGGACTTAATA+TGG 0.231011 5:+16826804 None:intergenic
CTTATGCAAGATATTCATTC+TGG 0.237659 5:-16827122 MsG0580025311.01.T01:CDS
ACCCAGACCACACATATTTC+TGG 0.247785 5:+16826732 None:intergenic
CGGCTTCGCCGCCACGGCGG+CGG 0.267102 5:-16828710 MsG0580025311.01.T01:CDS
GGCGAAGCCGCGTAGGCGGC+GGG 0.280396 5:+16828723 None:intergenic
AGGCGGCGGGGTTGTGGTTG+GGG 0.281050 5:+16828736 None:intergenic
TCAGCAACCATCTTTGCTTC+AGG 0.288355 5:-16822786 MsG0580025311.01.T01:CDS
AATATGTGTGGTCTGGGTAT+AGG 0.294983 5:-16826727 MsG0580025311.01.T01:CDS
GGTGATTATGACAACTATTA+TGG 0.299107 5:-16825253 MsG0580025311.01.T01:CDS
TAGGCGGCGGGGTTGTGGTT+GGG 0.320831 5:+16828735 None:intergenic
GAAATTGGTCTGGGAGCATC+TGG 0.323125 5:-16825604 MsG0580025311.01.T01:CDS
CGGCGAAGCCGCGTAGGCGG+CGG 0.325121 5:+16828722 None:intergenic
GTAAATTACACCCCACAAAA+TGG 0.336732 5:+16822557 None:intergenic
TGGATACTCTCTTGTGTTTG+AGG 0.340303 5:-16823229 MsG0580025311.01.T01:CDS
GAACGAGGGTTGATCACTTC+TGG 0.343467 5:-16822914 MsG0580025311.01.T01:CDS
CCAATGACTCATTAGCTTCC+TGG 0.346299 5:+16823148 None:intergenic
ATTAAGTCCTTAAATATTGA+TGG 0.349118 5:-16826800 MsG0580025311.01.T01:CDS
TTTGAGAACTTGTTCGGTTA+AGG 0.350304 5:-16827690 MsG0580025311.01.T01:CDS
CGGAAGTGTTGGATCCATTT+GGG 0.350444 5:-16824161 MsG0580025311.01.T01:CDS
AGCTCCTTCCTAATGCCTTC+AGG 0.351656 5:+16826830 None:intergenic
AAATGTTTGCCTGTCAGAAT+TGG 0.351900 5:-16822762 MsG0580025311.01.T01:CDS
AAGCAGTCAGTTGAATTGAT+TGG 0.355108 5:+16827548 None:intergenic
CCGCGTAGGCGGCGGGGTTG+TGG 0.358579 5:+16828730 None:intergenic
TGCAGGTTCCTGCCGTATAC+TGG 0.362202 5:-16823317 MsG0580025311.01.T01:intron
AGATGACAGGGAATCTTTAA+TGG 0.362543 5:-16822605 MsG0580025311.01.T01:exon
ATATGTGTGGTCTGGGTATA+GGG 0.362560 5:-16826726 MsG0580025311.01.T01:CDS
AAATATTGATGGTGTTGTTA+TGG 0.363965 5:-16826789 MsG0580025311.01.T01:CDS
ATGGTGTTGTTATGGATTGT+TGG 0.364734 5:-16826781 MsG0580025311.01.T01:CDS
GTTGAGAAAAGGGTAAATTT+GGG 0.366548 5:-16824213 MsG0580025311.01.T01:CDS
CGGAGCTGTGGTCGCTTTGT+GGG 0.367932 5:+16828767 None:intergenic
AAATTATGTCGAGGTTGTTA+TGG 0.369192 5:+16822410 None:intergenic
ACGGAAGTGTTGGATCCATT+TGG 0.376067 5:-16824162 MsG0580025311.01.T01:CDS
CTGCATGGTCTACTAAAGTC+TGG 0.377028 5:+16825206 None:intergenic
TCGGAGCTGTGGTCGCTTTG+TGG 0.379351 5:+16828766 None:intergenic
TTGTAGTGCCCAGCATTATC+AGG 0.379757 5:+16825313 None:intergenic
TGACTGCTTGGAGGCTGATC+AGG 0.381765 5:-16827534 MsG0580025311.01.T01:intron
ACCTGCCAACTCAGGCCATC+TGG 0.386436 5:+16823120 None:intergenic
AAAAGAGTGACCGCGTAGTT+TGG 0.391155 5:+16825348 None:intergenic
GCTGCTCTCGCGCGTGAGGC+TGG 0.391624 5:-16828523 MsG0580025311.01.T01:CDS
TTCTTTAATTATTAAGATAG+AGG 0.394296 5:-16822334 MsG0580025311.01.T01:three_prime_UTR
TTGATATGATGAGAAGCTTT+CGG 0.394412 5:-16825672 MsG0580025311.01.T01:CDS
TCCCAGAAATATGTGTGGTC+TGG 0.396705 5:-16826734 MsG0580025311.01.T01:CDS
ATGATTGATGCTGTAGAAAT+TGG 0.397538 5:-16825619 MsG0580025311.01.T01:CDS
AGCAGTCAGTTGAATTGATT+GGG 0.398837 5:+16827549 None:intergenic
TGTTGGTGGGGCATTGTTGA+AGG 0.399748 5:-16826764 MsG0580025311.01.T01:CDS
AATGAAAAGTGCCGGTGATC+AGG 0.403522 5:+16822818 None:intergenic
CTCTCGCGCGTGAGGCTGGT+TGG 0.404707 5:-16828519 MsG0580025311.01.T01:CDS
CGGTGATCAGGATCATTTCT+GGG 0.406853 5:+16822830 None:intergenic
TGATGGATCCTGAAGGCATT+AGG 0.410124 5:-16826838 MsG0580025311.01.T01:CDS
TCCTAAGCAGACAAATTTCA+TGG 0.413620 5:+16823185 None:intergenic
CAGCAACCATCTTTGCTTCA+GGG 0.418330 5:-16822785 MsG0580025311.01.T01:CDS
ATATCACAATCCCACAAATC+AGG 0.419172 5:-16823253 MsG0580025311.01.T01:CDS
TGTTGTTATGGATTGTTGGT+GGG 0.431915 5:-16826777 MsG0580025311.01.T01:CDS
TTACCTTGTTGTGGCTACAT+AGG 0.433218 5:-16822538 MsG0580025311.01.T01:three_prime_UTR
TTTATGTAAACAGGAACATA+TGG 0.433574 5:+16827071 None:intergenic
CCCAGACCACACATATTTCT+GGG 0.437815 5:+16826733 None:intergenic
GGTGGGGCATTGTTGAAGGC+TGG 0.439216 5:-16826760 MsG0580025311.01.T01:CDS
GGGACAAATTCCACCGGAAA+AGG 0.442955 5:-16828688 MsG0580025311.01.T01:CDS
TGCCTTCAGGATCCATCAAC+TGG 0.446486 5:+16826843 None:intergenic
GTGTTGTTATGGATTGTTGG+TGG 0.447259 5:-16826778 MsG0580025311.01.T01:CDS
CCAGGAAGCTAATGAGTCAT+TGG 0.447793 5:-16823148 MsG0580025311.01.T01:CDS
ACATTTCCCTGAAGCAAAGA+TGG 0.448478 5:+16822779 None:intergenic
GTAGGCGGCGGGGTTGTGGT+TGG 0.449462 5:+16828734 None:intergenic
AAAAGAGCGAGAGAAAGAAA+AGG 0.450160 5:-16828662 MsG0580025311.01.T01:CDS
TACAGGTATTAAACTCAGCT+TGG 0.451086 5:-16822937 MsG0580025311.01.T01:intron
CCCAGAAATATGTGTGGTCT+GGG 0.451457 5:-16826733 MsG0580025311.01.T01:CDS
AGTGTGGTTTAGTTGAGAAA+AGG 0.451850 5:-16824224 MsG0580025311.01.T01:CDS
CAATCATACCTTCTGCAAAC+AGG 0.452909 5:+16825635 None:intergenic
AACTCTATGCCACATGAGAC+TGG 0.453839 5:-16825292 MsG0580025311.01.T01:CDS
CCGTGGCGGCGAAGCCGCGT+AGG 0.454530 5:+16828716 None:intergenic
AAGTCTATTGAAGTTGAAGT+TGG 0.454770 5:-16822252 MsG0580025311.01.T01:three_prime_UTR
GTGTGGTTTAGTTGAGAAAA+GGG 0.456561 5:-16824223 MsG0580025311.01.T01:CDS
AATCAATTCAACTGACTGCT+TGG 0.457237 5:-16827546 MsG0580025311.01.T01:CDS
TTGTGGTTGGGGTAAGTAAT+CGG 0.458554 5:+16828747 None:intergenic
TCCTACCATAGCGTGGTTAA+CGG 0.458681 5:-16824181 MsG0580025311.01.T01:CDS
TGGTACTTTGAGAACTTGTT+CGG 0.461516 5:-16827696 MsG0580025311.01.T01:CDS
AGTCTTGTACCACCAGTATA+CGG 0.462042 5:+16823305 None:intergenic
GTTGTTATGGATTGTTGGTG+GGG 0.463077 5:-16826776 MsG0580025311.01.T01:CDS
AGGATGGGGTGGAGGTATCC+TGG 0.464484 5:-16825553 MsG0580025311.01.T01:CDS
ATCCTTGCAGGTGAGATGAC+AGG 0.465289 5:-16822618 MsG0580025311.01.T01:intron
GCTTCGCCGCCACGGCGGCG+GGG 0.466898 5:-16828708 MsG0580025311.01.T01:CDS
TTGTGTGGAAGTAGCATCTT+CGG 0.468284 5:+16828798 None:intergenic
CCACCCCATCCTTTCTGAAA+AGG 0.469410 5:+16825564 None:intergenic
AGAATTCAAGCTGAATATAC+AGG 0.471133 5:-16826684 MsG0580025311.01.T01:intron
AAAAGGAACGAACGAAGCTA+AGG 0.476064 5:-16828645 MsG0580025311.01.T01:CDS
TACCTTGTTGTGGCTACATA+GGG 0.478784 5:-16822537 MsG0580025311.01.T01:three_prime_UTR
CCTACGCGGCTTCGCCGCCA+CGG 0.482897 5:-16828716 MsG0580025311.01.T01:CDS
GGTTGGATTGTTGATGCTGA+TGG 0.483062 5:-16828502 MsG0580025311.01.T01:CDS
ACCATGAAATTTGTCTGCTT+AGG 0.486759 5:-16823186 MsG0580025311.01.T01:CDS
TTATGCAAGATATTCATTCT+GGG 0.487754 5:-16827121 MsG0580025311.01.T01:CDS
TGCAATGTCTTCTGTAACAA+CGG 0.488157 5:-16822475 MsG0580025311.01.T01:three_prime_UTR
GTATGGTAATTTCCCTCTCC+CGG 0.489619 5:-16828572 MsG0580025311.01.T01:CDS
TTAGCTGGACTCCGTCAGTA+TGG 0.494728 5:-16828589 MsG0580025311.01.T01:CDS
TGGCGGCGAAGCCGCGTAGG+CGG 0.499488 5:+16828719 None:intergenic
GCTAGAGGACCTGATAATGC+TGG 0.501946 5:-16825322 MsG0580025311.01.T01:CDS
TGATGCTGTAGAAATTGGTC+TGG 0.501988 5:-16825614 MsG0580025311.01.T01:CDS
TCATTAGCTTCCTGGTTGGA+AGG 0.509262 5:+16823156 None:intergenic
ACAGGTATTAAACTCAGCTT+GGG 0.509640 5:-16822936 MsG0580025311.01.T01:intron
ATATCAGCACGCGCCGGGAG+AGG 0.510910 5:+16828559 None:intergenic
TTTCAGAAAGGATGGGGTGG+AGG 0.511254 5:-16825561 MsG0580025311.01.T01:CDS
GAGTATCCATCCTGATTTGT+GGG 0.517306 5:+16823243 None:intergenic
CAATTCAACTGACTGCTTGG+AGG 0.518795 5:-16827543 MsG0580025311.01.T01:CDS
TTCTTCATCAAATGCATGCA+TGG 0.520174 5:-16822737 MsG0580025311.01.T01:intron
GGGTGGAGGTATCCTGGTAT+TGG 0.524209 5:-16825547 MsG0580025311.01.T01:CDS
AGCGTGGTTAACGGAAGTGT+TGG 0.524732 5:-16824172 MsG0580025311.01.T01:CDS
GGGTGTAATTTACCTTGTTG+TGG 0.525378 5:-16822547 MsG0580025311.01.T01:three_prime_UTR
TCAGTTGAAAGTCAACCATC+TGG 0.528161 5:-16827719 MsG0580025311.01.T01:CDS
GCAGAAAGGGACTCAAAGAA+TGG 0.530370 5:-16827590 MsG0580025311.01.T01:CDS
AAAACAGAATCAATAGATGC+AGG 0.538608 5:+16827617 None:intergenic
CTATCTACAATAGACCCAAA+TGG 0.542524 5:+16824147 None:intergenic
TCCAGATGGCCTGAGTTGGC+AGG 0.543608 5:-16823121 MsG0580025311.01.T01:intron
CATTCATATCAGCACGCGCC+GGG 0.544842 5:+16828554 None:intergenic
GTGTCTCCCTCCTTCCAACA+TGG 0.546110 5:-16828464 MsG0580025311.01.T01:intron
CTAAAATTACCTGCCAACTC+AGG 0.548595 5:+16823112 None:intergenic
TGTTGGAAGGAGGGAGACAC+TGG 0.550508 5:+16828467 None:intergenic
ACGCGGCTTCGCCGCCACGG+CGG 0.551565 5:-16828713 MsG0580025311.01.T01:CDS
ATCACGAGTAGAATGTTAGC+TGG 0.553331 5:-16828604 MsG0580025311.01.T01:CDS
CCCATCCTTTCTGAAAAGGA+AGG 0.556761 5:+16825568 None:intergenic
TATCAGCACGCGCCGGGAGA+GGG 0.558304 5:+16828560 None:intergenic
AAACAAAGAATGAAAAGTGC+CGG 0.559419 5:+16822810 None:intergenic
TTTGATGACCTGTTTGCAGA+AGG 0.560533 5:-16825643 MsG0580025311.01.T01:CDS
GTCAATTCTGCTGCATGACT+AGG 0.563214 5:+16823282 None:intergenic
AGAGTATCCATCCTGATTTG+TGG 0.564498 5:+16823242 None:intergenic
AAGTTTGAGTCGTGAATCAA+AGG 0.564575 5:+16824119 None:intergenic
TCCTTGCAGGTGAGATGACA+GGG 0.565996 5:-16822617 MsG0580025311.01.T01:intron
TGCATGGTCTACTAAAGTCT+GGG 0.566186 5:+16825207 None:intergenic
CATGCAGCAGAATTGACTGC+AGG 0.566474 5:-16823276 MsG0580025311.01.T01:CDS
TCCAGGGATCATTTGCCGCA+AGG 0.566747 5:-16827742 MsG0580025311.01.T01:intron
TGAAGAAATCCAATTCTGAC+AGG 0.567129 5:+16822753 None:intergenic
ATTTGTCCCCGCCGCCGTGG+CGG 0.567720 5:+16828702 None:intergenic
CCACAACCCCGCCGCCTACG+CGG 0.569008 5:-16828730 MsG0580025311.01.T01:CDS
GCGAAGCCGCGTAGGCGGCG+GGG 0.569975 5:+16828724 None:intergenic
AACACTAGAGAATCAGTCAC+CGG 0.572564 5:-16827666 MsG0580025311.01.T01:CDS
ATGGACGCTTCTTCTTACAT+TGG 0.572612 5:-16825234 MsG0580025311.01.T01:CDS
TTGATCCAGATGGCCTGAGT+TGG 0.574969 5:-16823125 MsG0580025311.01.T01:CDS
CTAGAGGACCTGATAATGCT+GGG 0.581369 5:-16825321 MsG0580025311.01.T01:CDS
AGGAATGCAACCAACCATGT+TGG 0.584157 5:+16828450 None:intergenic
ACCTGAAACTCACCAATACC+AGG 0.584300 5:+16825535 None:intergenic
CACAATCCCACAAATCAGGA+TGG 0.585925 5:-16823249 MsG0580025311.01.T01:CDS
TTAAACTCAGCTTGGGAACG+AGG 0.585944 5:-16822929 MsG0580025311.01.T01:CDS
CAACCAACCATGTTGGAAGG+AGG 0.589912 5:+16828457 None:intergenic
TTGACTTTCAACTGACCTTG+CGG 0.590564 5:+16827727 None:intergenic
AAAGGAACGAACGAAGCTAA+GGG 0.591350 5:-16828644 MsG0580025311.01.T01:CDS
GAGACAAAACATTATCTGCA+TGG 0.594938 5:+16825191 None:intergenic
AGGATTTAATCCTTCCAACC+AGG 0.595036 5:-16823166 MsG0580025311.01.T01:CDS
AACCAACCATGTTGGAAGGA+GGG 0.597351 5:+16828458 None:intergenic
AATTGGTCTGGGAGCATCTG+GGG 0.601511 5:-16825602 MsG0580025311.01.T01:CDS
TTGTACCACCAGTATACGGC+AGG 0.604078 5:+16823309 None:intergenic
CACTTCCGTTAACCACGCTA+TGG 0.605324 5:+16824176 None:intergenic
TGACTCATTAGCTTCCTGGT+TGG 0.607296 5:+16823152 None:intergenic
CCAGAAATGATCCTGATCAC+CGG 0.607555 5:-16822829 MsG0580025311.01.T01:CDS
GGAATTTGTCCCCGCCGCCG+TGG 0.607736 5:+16828699 None:intergenic
AGGAGGGAGACACTGGCGAT+AGG 0.608162 5:+16828474 None:intergenic
ATGCAACCAACCATGTTGGA+AGG 0.612973 5:+16828454 None:intergenic
GTACGAGAGATTGATTGAGA+TGG 0.613489 5:-16822858 MsG0580025311.01.T01:CDS
ACTTGCTGCTCTCGCGCGTG+AGG 0.614837 5:-16828527 MsG0580025311.01.T01:CDS
TAAACTCAGCTTGGGAACGA+GGG 0.616065 5:-16822928 MsG0580025311.01.T01:CDS
CATTCATCAACTCTAAGTCC+CGG 0.620550 5:+16827647 None:intergenic
GGATCCTGAAGGCATTAGGA+AGG 0.622255 5:-16826834 MsG0580025311.01.T01:CDS
TATGCAAGATATTCATTCTG+GGG 0.623010 5:-16827120 MsG0580025311.01.T01:CDS
CCATCCTTTCTGAAAAGGAA+GGG 0.623214 5:+16825569 None:intergenic
AAATTGGTCTGGGAGCATCT+GGG 0.623821 5:-16825603 MsG0580025311.01.T01:CDS
AAAGTTGTAAAATTATGTCG+AGG 0.624306 5:+16822401 None:intergenic
GGGGTAAGTAATCGGAGCTG+TGG 0.625072 5:+16828755 None:intergenic
TGCCAGTTGATGGATCCTGA+AGG 0.625854 5:-16826845 MsG0580025311.01.T01:CDS
GCGGCGGGGACAAATTCCAC+CGG 0.628450 5:-16828694 MsG0580025311.01.T01:CDS
GATGCTGTAGAAATTGGTCT+GGG 0.630924 5:-16825613 MsG0580025311.01.T01:CDS
TTGTGGGTCGAGATCTTGTG+TGG 0.631123 5:+16828783 None:intergenic
GTCCCTATGTAGCCACAACA+AGG 0.633615 5:+16822535 None:intergenic
GAGTCATTGGTTGATCCAGA+TGG 0.635799 5:-16823135 MsG0580025311.01.T01:CDS
ACGACTCAAACTTGTGACTG+AGG 0.637278 5:-16824109 MsG0580025311.01.T01:intron
CGCAGAGCTGCCAAACTACG+CGG 0.638467 5:-16825358 MsG0580025311.01.T01:CDS
TCATTCATATCAGCACGCGC+CGG 0.643548 5:+16828553 None:intergenic
CAAAAGAATCCAGTCTCATG+TGG 0.650881 5:+16825283 None:intergenic
TCCGTTAACCACGCTATGGT+AGG 0.654778 5:+16824180 None:intergenic
GAGGGAAATTACCATACTGA+CGG 0.656418 5:+16828578 None:intergenic
ACACTAGAGAATCAGTCACC+GGG 0.668842 5:-16827665 MsG0580025311.01.T01:CDS
GTTCTCAAAGTACCACCAGA+TGG 0.678737 5:+16827704 None:intergenic
TTCTACTCGTGATAGCTCGA+CGG 0.680739 5:+16828614 None:intergenic
AGGTTCCTGCCGTATACTGG+TGG 0.683068 5:-16823314 MsG0580025311.01.T01:CDS
GTTGAAAGTCAACCATCTGG+TGG 0.685021 5:-16827716 MsG0580025311.01.T01:CDS
ACAAAGCTCCTACCATAGCG+TGG 0.687210 5:-16824188 MsG0580025311.01.T01:CDS
GGAACTCCCAGAAATATGTG+TGG 0.702347 5:-16826739 MsG0580025311.01.T01:CDS
CCAGTGATGAATGATGATGA+CGG 0.758142 5:+16822222 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAGAATTATTTTGTATTATT+AGG + Chr5:16826850-16826869 None:intergenic 10.0%
!!! CTTAGAATTTTTTTTTATTT+TGG - Chr5:16823137-16823156 MsG0580025311.01.T01:CDS 10.0%
!!! TAACTTTATATCTTTTATTA+TGG + Chr5:16822934-16822953 None:intergenic 10.0%
!!! TAGAATTTTTTTTTATTTTG+GGG - Chr5:16823139-16823158 MsG0580025311.01.T01:CDS 10.0%
!! AAATAAAATAAATACCTGTT+TGG + Chr5:16827570-16827589 None:intergenic 15.0%
!! AAGAATAATAAACTTGAAAA+AGG - Chr5:16826555-16826574 MsG0580025311.01.T01:intron 15.0%
!! AATAGTTTAAGAACTTTATA+GGG + Chr5:16824695-16824714 None:intergenic 15.0%
!! CAATAAATTACAAATTTAGA+TGG + Chr5:16824004-16824023 None:intergenic 15.0%
!! GTAATAGAAAATAAATGATT+TGG + Chr5:16824627-16824646 None:intergenic 15.0%
!! TAATAGTTTAAGAACTTTAT+AGG + Chr5:16824696-16824715 None:intergenic 15.0%
!! TCAAAATTGAAAAAAAAAGA+AGG + Chr5:16822725-16822744 None:intergenic 15.0%
!! TTATATTCTATATGTTTGTA+AGG - Chr5:16825707-16825726 MsG0580025311.01.T01:intron 15.0%
!! TTCTTTAATTATTAAGATAG+AGG - Chr5:16828818-16828837 MsG0580025311.01.T01:CDS 15.0%
!!! AAAAATTTGGTTTCAAAAAA+AGG - Chr5:16826239-16826258 MsG0580025311.01.T01:intron 15.0%
!!! AGAATTTTTTTTTATTTTGG+GGG - Chr5:16823140-16823159 MsG0580025311.01.T01:CDS 15.0%
!!! TAAAAATAGTTTCTAAAAAC+TGG - Chr5:16827596-16827615 MsG0580025311.01.T01:CDS 15.0%
!!! TAATATCTTATTTACTTTTG+TGG - Chr5:16826651-16826670 MsG0580025311.01.T01:intron 15.0%
!!! TAGTTAGTAATAATTTGTTT+CGG - Chr5:16827146-16827165 MsG0580025311.01.T01:intron 15.0%
!! AAATCAATATGTTGAAATGT+TGG - Chr5:16823322-16823341 MsG0580025311.01.T01:intron 20.0%
!! AAGAGTTTATGATTAAACTT+AGG + Chr5:16827672-16827691 None:intergenic 20.0%
!! AATCAATATGTTGAAATGTT+GGG - Chr5:16823323-16823342 MsG0580025311.01.T01:intron 20.0%
!! AGAGTTTATGATTAAACTTA+GGG + Chr5:16827671-16827690 None:intergenic 20.0%
!! AGTTTATGTTGATATGATAT+CGG - Chr5:16823751-16823770 MsG0580025311.01.T01:intron 20.0%
!! ATTAAGTCCTTAAATATTGA+TGG - Chr5:16824352-16824371 MsG0580025311.01.T01:intron 20.0%
!! ATTAGCATTTATTCTATGAA+TGG + Chr5:16826212-16826231 None:intergenic 20.0%
!! ATTCATAGAATAAATGCTAA+TGG - Chr5:16826211-16826230 MsG0580025311.01.T01:intron 20.0%
!! CAATATTTAAGGACTTAATA+TGG + Chr5:16824351-16824370 None:intergenic 20.0%
!! GAAAAAAAAATTGTACTTAC+AGG - Chr5:16824177-16824196 MsG0580025311.01.T01:CDS 20.0%
!! GTATGTTTCAAATCATTTAT+AGG - Chr5:16822797-16822816 MsG0580025311.01.T01:CDS 20.0%
!! GTGTGTTTAAATTTATAATG+TGG - Chr5:16823954-16823973 MsG0580025311.01.T01:intron 20.0%
!! TAAAAATAAGATTACCAAAC+AGG - Chr5:16827553-16827572 MsG0580025311.01.T01:CDS 20.0%
!! TATGATACATGATGATTAAT+AGG - Chr5:16824596-16824615 MsG0580025311.01.T01:intron 20.0%
!! TTAGTGTTTATGTTTGATTA+AGG - Chr5:16823379-16823398 MsG0580025311.01.T01:intron 20.0%
!! TTGTTAAAAAGTAAGATTTG+CGG + Chr5:16828573-16828592 None:intergenic 20.0%
!!! AAAGTTTTAACGATACAATT+TGG - Chr5:16826763-16826782 MsG0580025311.01.T01:CDS 20.0%
!!! AGATAAATTTTCCATTTTGA+AGG + Chr5:16824541-16824560 None:intergenic 20.0%
!!! AGTATTAACATTTTAACGTT+AGG - Chr5:16827708-16827727 MsG0580025311.01.T01:CDS 20.0%
!!! ATGTGGTATATTTTCATTAA+TGG - Chr5:16827482-16827501 MsG0580025311.01.T01:intron 20.0%
!!! ATTACATATTTTGATCAACT+TGG - Chr5:16828151-16828170 MsG0580025311.01.T01:intron 20.0%
!!! ATTTGTTTCTTGTTTGTATA+TGG - Chr5:16825332-16825351 MsG0580025311.01.T01:CDS 20.0%
!!! CTTTAAAATATGTTTTGAAG+AGG - Chr5:16824934-16824953 MsG0580025311.01.T01:intron 20.0%
!!! TATATCAATTTTTCATGTTG+TGG - Chr5:16826038-16826057 MsG0580025311.01.T01:intron 20.0%
!!! TGAAAATTCTAAAACTTGTT+TGG - Chr5:16827331-16827350 MsG0580025311.01.T01:intron 20.0%
!!! TGATTAAAGCATTTTAGTTA+AGG + Chr5:16823246-16823265 None:intergenic 20.0%
!!! TTATGAAAATAAGTTGAACA+CGG - Chr5:16822997-16823016 MsG0580025311.01.T01:intron 20.0%
!!! TTCTGTTAGAATTTCTTTTT+GGG - Chr5:16827195-16827214 MsG0580025311.01.T01:intron 20.0%
!!! TTCTTTTTAATATCTTAACG+TGG - Chr5:16827103-16827122 MsG0580025311.01.T01:CDS 20.0%
!!! TTTCTGTTAGAATTTCTTTT+TGG - Chr5:16827194-16827213 MsG0580025311.01.T01:intron 20.0%
!!! TTTGAAATAACTTGTATGAT+GGG - Chr5:16828083-16828102 MsG0580025311.01.T01:intron 20.0%
! AAAGTTGTAAAATTATGTCG+AGG + Chr5:16828754-16828773 None:intergenic 25.0%
! AACAACACCATCAATATTTA+AGG + Chr5:16824362-16824381 None:intergenic 25.0%
! AATAAATATGAGACACTTAC+TGG + Chr5:16824111-16824130 None:intergenic 25.0%
! AGTAAATGCCTCATATTAAA+GGG + Chr5:16826166-16826185 None:intergenic 25.0%
! AGTTTCCAAAACTAAAAACA+CGG - Chr5:16827457-16827476 MsG0580025311.01.T01:intron 25.0%
! ATAAATATGAGACACTTACT+GGG + Chr5:16824110-16824129 None:intergenic 25.0%
! ATAAATTTAAACACACCACT+TGG + Chr5:16823950-16823969 None:intergenic 25.0%
! ATAGATCAAAGTGAATTCTA+AGG + Chr5:16828450-16828469 None:intergenic 25.0%
! ATTCATTAAGTTTAGAGACA+AGG + Chr5:16827809-16827828 None:intergenic 25.0%
! ATTTAGGGGTAAAAACTTAA+AGG + Chr5:16826724-16826743 None:intergenic 25.0%
! CGAACCTTATTATCAAAAAA+AGG + Chr5:16828797-16828816 None:intergenic 25.0%
! CTTATAACTGTGACTAAATT+TGG - Chr5:16826067-16826086 MsG0580025311.01.T01:intron 25.0%
! GCATAATACAATAACTTTGA+CGG + Chr5:16826908-16826927 None:intergenic 25.0%
! GGTATGTAAACATAAATAAC+AGG + Chr5:16825271-16825290 None:intergenic 25.0%
! TAAAATGGGATGAAAAATCA+AGG + Chr5:16826801-16826820 None:intergenic 25.0%
! TAAACTATTACACTACATGA+AGG - Chr5:16824706-16824725 MsG0580025311.01.T01:intron 25.0%
! TAAATTTAAACACACCACTT+GGG + Chr5:16823949-16823968 None:intergenic 25.0%
! TACAAAATAATTCTTGCTTG+TGG - Chr5:16826855-16826874 MsG0580025311.01.T01:CDS 25.0%
! TAGTAAATGCCTCATATTAA+AGG + Chr5:16826167-16826186 None:intergenic 25.0%
! TAGTTTAATGTAACAACCAA+GGG + Chr5:16827072-16827091 None:intergenic 25.0%
! TCAAAAATCAATAGAAGCTA+TGG - Chr5:16826374-16826393 MsG0580025311.01.T01:intron 25.0%
! TTAGTTTAATGTAACAACCA+AGG + Chr5:16827073-16827092 None:intergenic 25.0%
! TTATGCAAGATATTCATTCT+GGG - Chr5:16824031-16824050 MsG0580025311.01.T01:intron 25.0%
! TTGAATGAGTTTGAGTAAAA+AGG - Chr5:16822287-16822306 MsG0580025311.01.T01:three_prime_UTR 25.0%
! TTGCATTCATAATTCATAGA+TGG - Chr5:16826116-16826135 MsG0580025311.01.T01:intron 25.0%
! TTTAACTATTCAATGCAGAA+AGG - Chr5:16827250-16827269 MsG0580025311.01.T01:intron 25.0%
! TTTATGTAAACAGGAACATA+TGG + Chr5:16824084-16824103 None:intergenic 25.0%
! TTTCAAAAACAGAATCAAAC+AGG + Chr5:16827288-16827307 None:intergenic 25.0%
!! AAAGGAAGAGAAACTTTTAT+GGG + Chr5:16826706-16826725 None:intergenic 25.0%
!! AACTATAATTACGACTCTTT+TGG + Chr5:16826444-16826463 None:intergenic 25.0%
!! AGCAAAACATAAAACAGTTT+TGG + Chr5:16827382-16827401 None:intergenic 25.0%
!! ATTTTTCATCCCATTTTAAG+GGG - Chr5:16826803-16826822 MsG0580025311.01.T01:CDS 25.0%
!! GATTTTTCATCCCATTTTAA+GGG - Chr5:16826802-16826821 MsG0580025311.01.T01:CDS 25.0%
!! GCAAAACATAAAACAGTTTT+GGG + Chr5:16827381-16827400 None:intergenic 25.0%
!! TAAAGGAAGAGAAACTTTTA+TGG + Chr5:16826707-16826726 None:intergenic 25.0%
!! TCTGTTAGAATTTCTTTTTG+GGG - Chr5:16827196-16827215 MsG0580025311.01.T01:intron 25.0%
!! TGATTTTTCATCCCATTTTA+AGG - Chr5:16826801-16826820 MsG0580025311.01.T01:CDS 25.0%
!!! AAATATTGATGGTGTTGTTA+TGG - Chr5:16824363-16824382 MsG0580025311.01.T01:intron 25.0%
!!! AAATTTTCCATTTTGAAGGA+TGG + Chr5:16824537-16824556 None:intergenic 25.0%
!!! ATAATGCAACTGTTTTGAAA+TGG + Chr5:16825660-16825679 None:intergenic 25.0%
!!! ATGGCATTTTAGTAAATAAG+TGG - Chr5:16827501-16827520 MsG0580025311.01.T01:intron 25.0%
!!! ATTCTGTTTTAATTGCAGAA+AGG - Chr5:16823548-16823567 MsG0580025311.01.T01:intron 25.0%
!!! CGATCCTTTTTTTGATAATA+AGG - Chr5:16828790-16828809 MsG0580025311.01.T01:CDS 25.0%
!!! CTTATTTTCATAAACTCTCT+CGG + Chr5:16822990-16823009 None:intergenic 25.0%
!!! CTTTGAAATAACTTGTATGA+TGG - Chr5:16828082-16828101 MsG0580025311.01.T01:intron 25.0%
!!! GATTAAGGTTTTATTATCCA+GGG - Chr5:16823394-16823413 MsG0580025311.01.T01:intron 25.0%
!!! GCAAATCTTACTTTTTAACA+AGG - Chr5:16828572-16828591 MsG0580025311.01.T01:CDS 25.0%
!!! GGAAACAGTTTTTAAAAAGT+AGG + Chr5:16827360-16827379 None:intergenic 25.0%
!!! TAAAATTAGCCTTTTATTGC+AGG - Chr5:16824264-16824283 MsG0580025311.01.T01:intron 25.0%
!!! TAAAGCATTTTAGTTAAGGT+CGG + Chr5:16823242-16823261 None:intergenic 25.0%
!!! TAATGCAACTGTTTTGAAAT+GGG + Chr5:16825659-16825678 None:intergenic 25.0%
!!! TGATTAAGGTTTTATTATCC+AGG - Chr5:16823393-16823412 MsG0580025311.01.T01:intron 25.0%
!!! TTCTGTTTTAATTGCAGAAA+GGG - Chr5:16823549-16823568 MsG0580025311.01.T01:intron 25.0%
!!! TTTTCTAGAACTTTTTACAC+AGG + Chr5:16824162-16824181 None:intergenic 25.0%
AAAACAGAATCAATAGATGC+AGG + Chr5:16823538-16823557 None:intergenic 30.0%
AAACTAAAAACACGGAAATG+TGG - Chr5:16827465-16827484 MsG0580025311.01.T01:intron 30.0%
AAATAAGCCAATCCAAATAG+AGG - Chr5:16823097-16823116 MsG0580025311.01.T01:intron 30.0%
AAATACTGAATGCCTATCTT+GGG - Chr5:16825133-16825152 MsG0580025311.01.T01:intron 30.0%
AAATTATGTCGAGGTTGTTA+TGG + Chr5:16828745-16828764 None:intergenic 30.0%
AAGTCTATTGAAGTTGAAGT+TGG - Chr5:16828900-16828919 MsG0580025311.01.T01:five_prime_UTR 30.0%
AATGAGTTTGAGTAAAAAGG+TGG - Chr5:16822290-16822309 MsG0580025311.01.T01:three_prime_UTR 30.0%
AATGCAGAAAGGACAAATTA+AGG - Chr5:16827261-16827280 MsG0580025311.01.T01:intron 30.0%
ACAACCTTAGTTTCACATAT+GGG - Chr5:16826582-16826601 MsG0580025311.01.T01:intron 30.0%
AGAATTCAAGCTGAATATAC+AGG - Chr5:16824468-16824487 MsG0580025311.01.T01:intron 30.0%
AGAATTTGAAGAGTCAAGAT+AGG + Chr5:16824982-16825001 None:intergenic 30.0%
AGGATAGTAAACAGAAAAAG+AGG - Chr5:16826259-16826278 MsG0580025311.01.T01:intron 30.0%
AGTTATTGTATTATGCAGTG+TGG - Chr5:16826912-16826931 MsG0580025311.01.T01:intron 30.0%
AGTTCAATATCCCCTTAAAA+TGG + Chr5:16826816-16826835 None:intergenic 30.0%
AGTTGAGAAAAGGGTAAATT+TGG - Chr5:16826938-16826957 MsG0580025311.01.T01:intron 30.0%
AGTTTAAGAACTTTATAGGG+AGG + Chr5:16824692-16824711 None:intergenic 30.0%
AGTTTAATGTAACAACCAAG+GGG + Chr5:16827071-16827090 None:intergenic 30.0%
ATAAAATTGTTTCCCTAGCT+TGG - Chr5:16824845-16824864 MsG0580025311.01.T01:intron 30.0%
ATATGTTGAAATGTTGGGTT+AGG - Chr5:16823328-16823347 MsG0580025311.01.T01:intron 30.0%
ATGATTGATGCTGTAGAAAT+TGG - Chr5:16825533-16825552 MsG0580025311.01.T01:intron 30.0%
ATGCAGAAAGGACAAATTAA+GGG - Chr5:16827262-16827281 MsG0580025311.01.T01:intron 30.0%
CATAAACTAGAAAAACAGTG+AGG + Chr5:16823739-16823758 None:intergenic 30.0%
CTAACTATGATTCCAGATAA+AGG + Chr5:16827133-16827152 None:intergenic 30.0%
CTTATGCAAGATATTCATTC+TGG - Chr5:16824030-16824049 MsG0580025311.01.T01:intron 30.0%
GATAGCATGATTAGAAATTC+TGG + Chr5:16823220-16823239 None:intergenic 30.0%
GCAAGATATTCAAATCTTGT+TGG - Chr5:16826471-16826490 MsG0580025311.01.T01:intron 30.0%
GGGAACAAAAATTATTGTCA+AGG - Chr5:16826003-16826022 MsG0580025311.01.T01:intron 30.0%
GGTGATTATGACAACTATTA+TGG - Chr5:16825899-16825918 MsG0580025311.01.T01:intron 30.0%
GTTCAATATCCCCTTAAAAT+GGG + Chr5:16826815-16826834 None:intergenic 30.0%
GTTGAGAAAAGGGTAAATTT+GGG - Chr5:16826939-16826958 MsG0580025311.01.T01:intron 30.0%
TAAAGATGCTTTCCAATTAG+AGG + Chr5:16824919-16824938 None:intergenic 30.0%
TAAATGTCCAAGTTGTATGA+TGG - Chr5:16826399-16826418 MsG0580025311.01.T01:intron 30.0%
TACAACCTTAGTTTCACATA+TGG - Chr5:16826581-16826600 MsG0580025311.01.T01:intron 30.0%
TATCTGCATTTCATCTGAAA+GGG - Chr5:16825302-16825321 MsG0580025311.01.T01:CDS 30.0%
TATGCAAGATATTCATTCTG+GGG - Chr5:16824032-16824051 MsG0580025311.01.T01:intron 30.0%
TCTAAGCAACAACAAACTAA+GGG + Chr5:16823123-16823142 None:intergenic 30.0%
TGAAATAAGCTTCATGCAAT+TGG + Chr5:16823906-16823925 None:intergenic 30.0%
TGATGATTACTTCTGATTGA+AGG - Chr5:16822742-16822761 MsG0580025311.01.T01:CDS 30.0%
TTCTAAGCAACAACAAACTA+AGG + Chr5:16823124-16823143 None:intergenic 30.0%
TTGAATTTAACCACATGTGT+CGG + Chr5:16822880-16822899 None:intergenic 30.0%
TTGATATGATGAGAAGCTTT+CGG - Chr5:16825480-16825499 MsG0580025311.01.T01:intron 30.0%
! AAACAAAGAATGAAAAGTGC+CGG + Chr5:16828345-16828364 None:intergenic 30.0%
! ATATTTTTCACAGATCGTGA+AGG - Chr5:16825104-16825123 MsG0580025311.01.T01:intron 30.0%
! CAAGTCTATGTTTGATTTAG+GGG + Chr5:16826738-16826757 None:intergenic 30.0%
! CATACAAGTTATTTCAAAGC+TGG + Chr5:16828081-16828100 None:intergenic 30.0%
! CCAAGTCTATGTTTGATTTA+GGG + Chr5:16826739-16826758 None:intergenic 30.0%
! GGTGTGTATTGATATACTAT+TGG - Chr5:16823820-16823839 MsG0580025311.01.T01:intron 30.0%
! GTTATTTCAAAGCTGGATTA+AGG + Chr5:16828074-16828093 None:intergenic 30.0%
! TAACAAATTTTGCCAGTTGA+TGG - Chr5:16824297-16824316 MsG0580025311.01.T01:intron 30.0%
! TATTCAAATCTTGTTGGTGA+AGG - Chr5:16826477-16826496 MsG0580025311.01.T01:intron 30.0%
! TATTGTCAAGGTAGTTTTTC+TGG - Chr5:16826015-16826034 MsG0580025311.01.T01:intron 30.0%
! TCAAATTCTGAAGGTTGTTA+TGG - Chr5:16824993-16825012 MsG0580025311.01.T01:intron 30.0%
! TTAAAGCTTTTTATCCTTGC+AGG - Chr5:16828522-16828541 MsG0580025311.01.T01:CDS 30.0%
! TTTCATCCATTTGTTACGAA+TGG - Chr5:16828186-16828205 MsG0580025311.01.T01:intron 30.0%
!! GCAGGATATGTATTTTTAAG+TGG + Chr5:16827751-16827770 None:intergenic 30.0%
!! TATTACAAGAGTGTCATTTC+TGG - Chr5:16824641-16824660 MsG0580025311.01.T01:intron 30.0%
!! TCTTTTGCTATGATAGAGAA+AGG - Chr5:16828272-16828291 MsG0580025311.01.T01:intron 30.0%
!! TTGACTTGTATTTGATCACA+GGG - Chr5:16824237-16824256 MsG0580025311.01.T01:intron 30.0%
!! TTTGACTTGTATTTGATCAC+AGG - Chr5:16824236-16824255 MsG0580025311.01.T01:intron 30.0%
!! TTTTAACAAGGCCATTTTGT+GGG - Chr5:16828584-16828603 MsG0580025311.01.T01:CDS 30.0%
!! TTTTTAACAAGGCCATTTTG+TGG - Chr5:16828583-16828602 MsG0580025311.01.T01:CDS 30.0%
!!! AATGCAACTGTTTTGAAATG+GGG + Chr5:16825658-16825677 None:intergenic 30.0%
!!! CATTTCCGTGTTTTTAGTTT+TGG + Chr5:16827465-16827484 None:intergenic 30.0%
!!! GTGTTTTTAGTTTTGGAAAC+TGG + Chr5:16827458-16827477 None:intergenic 30.0%
AAAAGAGCGAGAGAAAGAAA+AGG - Chr5:16822490-16822509 MsG0580025311.01.T01:three_prime_UTR 35.0%
AAATGTTTGCCTGTCAGAAT+TGG - Chr5:16828390-16828409 MsG0580025311.01.T01:intron 35.0%
AACAGAGTTAAAGCCTCAAA+AGG + Chr5:16824218-16824237 None:intergenic 35.0%
AACTGAAAACGCAATCAAAC+AGG - Chr5:16827645-16827664 MsG0580025311.01.T01:CDS 35.0%
AAGCAGTCAGTTGAATTGAT+TGG + Chr5:16823607-16823626 None:intergenic 35.0%
AAGTTTGAGTCGTGAATCAA+AGG + Chr5:16827036-16827055 None:intergenic 35.0%
AATACTGAATGCCTATCTTG+GGG - Chr5:16825134-16825153 MsG0580025311.01.T01:intron 35.0%
AATCAATTCAACTGACTGCT+TGG - Chr5:16823606-16823625 MsG0580025311.01.T01:intron 35.0%
AATGCAGATACACTGGAAAT+TGG + Chr5:16825292-16825311 None:intergenic 35.0%
ACAGGTATTAAACTCAGCTT+GGG - Chr5:16828216-16828235 MsG0580025311.01.T01:intron 35.0%
ACCATGAAATTTGTCTGCTT+AGG - Chr5:16827966-16827985 MsG0580025311.01.T01:intron 35.0%
ACTACATGAAGGACTGAATA+GGG - Chr5:16824717-16824736 MsG0580025311.01.T01:intron 35.0%
ACTTAATGAATAAACGCTGC+AGG - Chr5:16827818-16827837 MsG0580025311.01.T01:intron 35.0%
AGACCTGTATATAATGCAGA+AGG + Chr5:16825457-16825476 None:intergenic 35.0%
AGATGACAGGGAATCTTTAA+TGG - Chr5:16828547-16828566 MsG0580025311.01.T01:CDS 35.0%
AGCAGTCAGTTGAATTGATT+GGG + Chr5:16823606-16823625 None:intergenic 35.0%
AGTAAACAGAAAAAGAGGTC+TGG - Chr5:16826264-16826283 MsG0580025311.01.T01:intron 35.0%
AGTGTGGTTTAGTTGAGAAA+AGG - Chr5:16826928-16826947 MsG0580025311.01.T01:intron 35.0%
ATATCACAATCCCACAAATC+AGG - Chr5:16827899-16827918 MsG0580025311.01.T01:intron 35.0%
ATGGGGTAAAATTCAATCTC+CGG - Chr5:16826600-16826619 MsG0580025311.01.T01:intron 35.0%
ATGTCAGAAGTTCCTCTAAT+TGG - Chr5:16824904-16824923 MsG0580025311.01.T01:intron 35.0%
ATTTCAAAGCTGGATTAAGG+TGG + Chr5:16828071-16828090 None:intergenic 35.0%
CAAATGGATGAAAACATGCA+TGG + Chr5:16828179-16828198 None:intergenic 35.0%
CAACCTTAGTTTCACATATG+GGG - Chr5:16826583-16826602 MsG0580025311.01.T01:intron 35.0%
CAATCACCATTCGTAACAAA+TGG + Chr5:16828195-16828214 None:intergenic 35.0%
CCCTAAATCAAACATAGACT+TGG - Chr5:16826736-16826755 MsG0580025311.01.T01:CDS 35.0%
CTATCAGACTTTACTTACCT+CGG + Chr5:16823184-16823203 None:intergenic 35.0%
CTATCTACAATAGACCCAAA+TGG + Chr5:16827008-16827027 None:intergenic 35.0%
CTTGACTCTTCAAATTCTGA+AGG - Chr5:16824984-16825003 MsG0580025311.01.T01:intron 35.0%
GAAAATGCCATCATACAACT+TGG + Chr5:16826409-16826428 None:intergenic 35.0%
GAAATACTGAATGCCTATCT+TGG - Chr5:16825132-16825151 MsG0580025311.01.T01:intron 35.0%
GACAAGGATACAACTTCATT+TGG + Chr5:16827793-16827812 None:intergenic 35.0%
GAGACAAAACATTATCTGCA+TGG + Chr5:16825964-16825983 None:intergenic 35.0%
GATCTGTGAAAAATATGTCC+TGG + Chr5:16825100-16825119 None:intergenic 35.0%
GCTGAACTACTTGATTTAGT+TGG - Chr5:16823271-16823290 MsG0580025311.01.T01:CDS 35.0%
GCTTATTTGAGCTTATCTAC+TGG + Chr5:16823085-16823104 None:intergenic 35.0%
GGATGCATGTATAACATGAT+AGG + Chr5:16824516-16824535 None:intergenic 35.0%
GTAAATTACACCCCACAAAA+TGG + Chr5:16828598-16828617 None:intergenic 35.0%
GTATCTGCATTTCATCTGAA+AGG - Chr5:16825301-16825320 MsG0580025311.01.T01:CDS 35.0%
GTGTGGTTTAGTTGAGAAAA+GGG - Chr5:16826929-16826948 MsG0580025311.01.T01:intron 35.0%
GTTATGGCATTTCATGAATG+TGG - Chr5:16825009-16825028 MsG0580025311.01.T01:intron 35.0%
TAACGTGGTAATCCTTTATC+TGG - Chr5:16827118-16827137 MsG0580025311.01.T01:CDS 35.0%
TAATACCAGCCTGCAATAAA+AGG + Chr5:16824276-16824295 None:intergenic 35.0%
TACAGGTATTAAACTCAGCT+TGG - Chr5:16828215-16828234 MsG0580025311.01.T01:intron 35.0%
TAGCCTTCTGCATTATATAC+AGG - Chr5:16825451-16825470 MsG0580025311.01.T01:intron 35.0%
TCCTAAGCAGACAAATTTCA+TGG + Chr5:16827970-16827989 None:intergenic 35.0%
TGAAGAAATCCAATTCTGAC+AGG + Chr5:16828402-16828421 None:intergenic 35.0%
TGAGTAAAAAGGTGGTAGAA+CGG - Chr5:16822298-16822317 MsG0580025311.01.T01:three_prime_UTR 35.0%
TGCAATGTCTTCTGTAACAA+CGG - Chr5:16828677-16828696 MsG0580025311.01.T01:CDS 35.0%
TTACCCCATATGTGAAACTA+AGG + Chr5:16826589-16826608 None:intergenic 35.0%
TTCACATACTATCCAAGCTA+GGG + Chr5:16824860-16824879 None:intergenic 35.0%
TTCTTCATCAAATGCATGCA+TGG - Chr5:16828415-16828434 MsG0580025311.01.T01:intron 35.0%
TTGGTATGCCCTTTAATATG+AGG - Chr5:16826155-16826174 MsG0580025311.01.T01:intron 35.0%
TTTCACATACTATCCAAGCT+AGG + Chr5:16824861-16824880 None:intergenic 35.0%
! AATACCCTTCCTTTTCAGAA+AGG - Chr5:16825579-16825598 MsG0580025311.01.T01:CDS 35.0%
! ATGCTTTTACTTTCAATGGC+AGG + Chr5:16827769-16827788 None:intergenic 35.0%
! CTAGAACTTTTTACACAGGT+TGG + Chr5:16824158-16824177 None:intergenic 35.0%
! GCCAAGTCTATGTTTGATTT+AGG + Chr5:16826740-16826759 None:intergenic 35.0%
! TGGCATGCTTTTACTTTCAA+TGG + Chr5:16827773-16827792 None:intergenic 35.0%
! TGGTACTTTGAGAACTTGTT+CGG - Chr5:16823456-16823475 MsG0580025311.01.T01:intron 35.0%
! TGTTGTTATGGATTGTTGGT+GGG - Chr5:16824375-16824394 MsG0580025311.01.T01:intron 35.0%
! TTTGAGAACTTGTTCGGTTA+AGG - Chr5:16823462-16823481 MsG0580025311.01.T01:intron 35.0%
! TTTTTGTTCCCTCAAAAGCA+AGG + Chr5:16825994-16826013 None:intergenic 35.0%
!! ACTGGGAGTTTTATGTAAAC+AGG + Chr5:16824093-16824112 None:intergenic 35.0%
!! ATGGTGTTGTTATGGATTGT+TGG - Chr5:16824371-16824390 MsG0580025311.01.T01:intron 35.0%
!! CATTTTAACGTTAGGAAGCA+TGG - Chr5:16827716-16827735 MsG0580025311.01.T01:CDS 35.0%
!! GTTAGTGTTTTTAACCCAAG+TGG - Chr5:16823932-16823951 MsG0580025311.01.T01:intron 35.0%
!! TACTCTAAAAAGCACTGACA+TGG + Chr5:16822780-16822799 None:intergenic 35.0%
!! TTTAACAAGGCCATTTTGTG+GGG - Chr5:16828585-16828604 MsG0580025311.01.T01:CDS 35.0%
!!! TCGCTCTTTTTTTCCTTTTC+CGG + Chr5:16822480-16822499 None:intergenic 35.0%
AAAAGGAACGAACGAAGCTA+AGG - Chr5:16822507-16822526 MsG0580025311.01.T01:three_prime_UTR 40.0%
AAAGGAACGAACGAAGCTAA+GGG - Chr5:16822508-16822527 MsG0580025311.01.T01:three_prime_UTR 40.0%
AACACTAGAGAATCAGTCAC+CGG - Chr5:16823486-16823505 MsG0580025311.01.T01:intron 40.0%
AACCAGGAAGAAAACAAAGG+AGG - Chr5:16826516-16826535 MsG0580025311.01.T01:intron 40.0%
AATAGGGAACACAGAGAATG+TGG - Chr5:16824733-16824752 MsG0580025311.01.T01:intron 40.0%
AATATGTGTGGTCTGGGTAT+AGG - Chr5:16824425-16824444 MsG0580025311.01.T01:intron 40.0%
ACAAACTAAGGGCCTCTATT+TGG + Chr5:16823112-16823131 None:intergenic 40.0%
ACATTTCCCTGAAGCAAAGA+TGG + Chr5:16828376-16828395 None:intergenic 40.0%
AGGATTTAATCCTTCCAACC+AGG - Chr5:16827986-16828005 MsG0580025311.01.T01:intron 40.0%
ATATGTGTGGTCTGGGTATA+GGG - Chr5:16824426-16824445 MsG0580025311.01.T01:intron 40.0%
ATCACGAGTAGAATGTTAGC+TGG - Chr5:16822548-16822567 MsG0580025311.01.T01:three_prime_UTR 40.0%
ATGGACGCTTCTTCTTACAT+TGG - Chr5:16825918-16825937 MsG0580025311.01.T01:intron 40.0%
ATGGCATTTCATGAATGTGG+AGG - Chr5:16825012-16825031 MsG0580025311.01.T01:intron 40.0%
ATGTCGAGAAGTGATTGAAC+AGG - Chr5:16823977-16823996 MsG0580025311.01.T01:intron 40.0%
CAAAAGAATCCAGTCTCATG+TGG + Chr5:16825872-16825891 None:intergenic 40.0%
CAAAGGAAGAACTGGAATTG+AGG - Chr5:16825178-16825197 MsG0580025311.01.T01:CDS 40.0%
CAATCATACCTTCTGCAAAC+AGG + Chr5:16825520-16825539 None:intergenic 40.0%
CACTACATGAAGGACTGAAT+AGG - Chr5:16824716-16824735 MsG0580025311.01.T01:intron 40.0%
CACTTGTGAGATTGTTTGAG+AGG + Chr5:16823056-16823075 None:intergenic 40.0%
CAGATGAAATGCAGATACAC+TGG + Chr5:16825299-16825318 None:intergenic 40.0%
CAGGTATGAGATCAGAAATC+AGG - Chr5:16827226-16827245 MsG0580025311.01.T01:intron 40.0%
CATAATCAGATTCTCTGGTC+TGG - Chr5:16823799-16823818 MsG0580025311.01.T01:intron 40.0%
CATGCATCCATCCTTCAAAA+TGG - Chr5:16824527-16824546 MsG0580025311.01.T01:intron 40.0%
CATTCATCAACTCTAAGTCC+CGG + Chr5:16823508-16823527 None:intergenic 40.0%
CCATATCCAAAACCCATTGT+GGG + Chr5:16825068-16825087 None:intergenic 40.0%
CTAAAATTACCTGCCAACTC+AGG + Chr5:16828043-16828062 None:intergenic 40.0%
CTCAGCATAATCAGATTCTC+TGG - Chr5:16823794-16823813 MsG0580025311.01.T01:intron 40.0%
CTCTCAAACAATCTCACAAG+TGG - Chr5:16823054-16823073 MsG0580025311.01.T01:intron 40.0%
CTTTGTCAATTCCCCAAGAT+AGG + Chr5:16825148-16825167 None:intergenic 40.0%
GAGGGAAATTACCATACTGA+CGG + Chr5:16822577-16822596 None:intergenic 40.0%
GGAAACCAGGAAGAAAACAA+AGG - Chr5:16826513-16826532 MsG0580025311.01.T01:intron 40.0%
GGGTGTAATTTACCTTGTTG+TGG - Chr5:16828605-16828624 MsG0580025311.01.T01:CDS 40.0%
GTACGAGAGATTGATTGAGA+TGG - Chr5:16828294-16828313 MsG0580025311.01.T01:intron 40.0%
GTTACGAATGGTGATTGTAC+AGG - Chr5:16828198-16828217 MsG0580025311.01.T01:intron 40.0%
TCAGTTGAAAGTCAACCATC+TGG - Chr5:16823433-16823452 MsG0580025311.01.T01:intron 40.0%
TCCATATCCAAAACCCATTG+TGG + Chr5:16825069-16825088 None:intergenic 40.0%
TGATGCTGTAGAAATTGGTC+TGG - Chr5:16825538-16825557 MsG0580025311.01.T01:CDS 40.0%
TGCATGGTCTACTAAAGTCT+GGG + Chr5:16825948-16825967 None:intergenic 40.0%
TGGATACTCTCTTGTGTTTG+AGG - Chr5:16827923-16827942 MsG0580025311.01.T01:intron 40.0%
TGGATATGGAAAAGACAACC+AGG - Chr5:16825079-16825098 MsG0580025311.01.T01:intron 40.0%
TGGCATTTCATGAATGTGGA+GGG - Chr5:16825013-16825032 MsG0580025311.01.T01:intron 40.0%
TGGTACCTATAGAGTCAGTT+TGG - Chr5:16826136-16826155 MsG0580025311.01.T01:intron 40.0%
TTGACTTTCAACTGACCTTG+CGG + Chr5:16823428-16823447 None:intergenic 40.0%
TTGTGGTTGGGGTAAGTAAT+CGG + Chr5:16822408-16822427 None:intergenic 40.0%
TTGTGTGGAAGTAGCATCTT+CGG + Chr5:16822357-16822376 None:intergenic 40.0%
! AAATTCAGTGATCGATTCCG+AGG - Chr5:16823164-16823183 MsG0580025311.01.T01:CDS 40.0%
! AGAGTATCCATCCTGATTTG+TGG + Chr5:16827913-16827932 None:intergenic 40.0%
! AGTCTTGTACCACCAGTATA+CGG + Chr5:16827850-16827869 None:intergenic 40.0%
! ATTGATTTCCCTCCCACAAT+GGG - Chr5:16825053-16825072 MsG0580025311.01.T01:intron 40.0%
! CCATCCTTTCTGAAAAGGAA+GGG + Chr5:16825586-16825605 None:intergenic 40.0%
! CCTTCCTTTTCAGAAAGGAT+GGG - Chr5:16825584-16825603 MsG0580025311.01.T01:CDS 40.0%
! CTTCCTTTTCAGAAAGGATG+GGG - Chr5:16825585-16825604 MsG0580025311.01.T01:CDS 40.0%
! GAGTATCCATCCTGATTTGT+GGG + Chr5:16827912-16827931 None:intergenic 40.0%
! GATGCTGTAGAAATTGGTCT+GGG - Chr5:16825539-16825558 MsG0580025311.01.T01:CDS 40.0%
! GCATACCAAACTGACTCTAT+AGG + Chr5:16826144-16826163 None:intergenic 40.0%
! GTGTTGTTATGGATTGTTGG+TGG - Chr5:16824374-16824393 MsG0580025311.01.T01:intron 40.0%
! GTTGTTATGGATTGTTGGTG+GGG - Chr5:16824376-16824395 MsG0580025311.01.T01:intron 40.0%
! TACCTTGTTGTGGCTACATA+GGG - Chr5:16828615-16828634 MsG0580025311.01.T01:CDS 40.0%
! TTACCTTGTTGTGGCTACAT+AGG - Chr5:16828614-16828633 MsG0580025311.01.T01:CDS 40.0%
! TTTGATGACCTGTTTGCAGA+AGG - Chr5:16825509-16825528 MsG0580025311.01.T01:intron 40.0%
! TTTTCACAGATCGTGAAGGA+CGG - Chr5:16825108-16825127 MsG0580025311.01.T01:intron 40.0%
!! AACTTGTATGATGGGTGAAG+TGG - Chr5:16828091-16828110 MsG0580025311.01.T01:intron 40.0%
!! ATGCAATTGGTTCGCAACTT+TGG + Chr5:16823893-16823912 None:intergenic 40.0%
!! CAAGAGTGTCATTTCTGGTT+AGG - Chr5:16824646-16824665 MsG0580025311.01.T01:intron 40.0%
!! CTTGCAAACCTTGCTTTTGA+GGG - Chr5:16825983-16826002 MsG0580025311.01.T01:intron 40.0%
!! TCTTGCAAACCTTGCTTTTG+AGG - Chr5:16825982-16826001 MsG0580025311.01.T01:intron 40.0%
!! TTTCAGGTACCTCGTTCTTT+TGG - Chr5:16825632-16825651 MsG0580025311.01.T01:CDS 40.0%
!!! ATTAGCCTTTTATTGCAGGC+TGG - Chr5:16824268-16824287 MsG0580025311.01.T01:intron 40.0%
!!! CTCTTTTTTTCCTTTTCCGG+TGG + Chr5:16822477-16822496 None:intergenic 40.0%
!!! TTCTTTTTGGGGTTGTGTAC+AGG - Chr5:16827207-16827226 MsG0580025311.01.T01:intron 40.0%
AAAAGAGTGACCGCGTAGTT+TGG + Chr5:16825807-16825826 None:intergenic 45.0%
AACCAACCATGTTGGAAGGA+GGG + Chr5:16822697-16822716 None:intergenic 45.0%
AACTCTATGCCACATGAGAC+TGG - Chr5:16825860-16825879 MsG0580025311.01.T01:intron 45.0%
ACACTAGAGAATCAGTCACC+GGG - Chr5:16823487-16823506 MsG0580025311.01.T01:intron 45.0%
ACAGAGAATGTGGCGAAGTA+CGG - Chr5:16824743-16824762 MsG0580025311.01.T01:intron 45.0%
ACCCAGACCACACATATTTC+TGG + Chr5:16824423-16824442 None:intergenic 45.0%
ACCTGAAACTCACCAATACC+AGG + Chr5:16825620-16825639 None:intergenic 45.0%
ACGACTCAAACTTGTGACTG+AGG - Chr5:16827043-16827062 MsG0580025311.01.T01:intron 45.0%
AGGAATGCAACCAACCATGT+TGG + Chr5:16822705-16822724 None:intergenic 45.0%
ATCCAAAACCCATTGTGGGA+GGG + Chr5:16825064-16825083 None:intergenic 45.0%
ATGCAACCAACCATGTTGGA+AGG + Chr5:16822701-16822720 None:intergenic 45.0%
ATTGCAAGAGACTGGAAACC+AGG - Chr5:16826500-16826519 MsG0580025311.01.T01:intron 45.0%
CAATTCAACTGACTGCTTGG+AGG - Chr5:16823609-16823628 MsG0580025311.01.T01:intron 45.0%
CACAATCCCACAAATCAGGA+TGG - Chr5:16827903-16827922 MsG0580025311.01.T01:intron 45.0%
CAGCAACCATCTTTGCTTCA+GGG - Chr5:16828367-16828386 MsG0580025311.01.T01:intron 45.0%
CCAGAAATGATCCTGATCAC+CGG - Chr5:16828323-16828342 MsG0580025311.01.T01:intron 45.0%
CCAGGAAGCTAATGAGTCAT+TGG - Chr5:16828004-16828023 MsG0580025311.01.T01:intron 45.0%
CCCAGAAATATGTGTGGTCT+GGG - Chr5:16824419-16824438 MsG0580025311.01.T01:intron 45.0%
CCCAGACCACACATATTTCT+GGG + Chr5:16824422-16824441 None:intergenic 45.0%
CGAGTTCTCAAAGGAAGAAC+TGG - Chr5:16825170-16825189 MsG0580025311.01.T01:CDS 45.0%
CGGTGATCAGGATCATTTCT+GGG + Chr5:16828325-16828344 None:intergenic 45.0%
CTAAGGGCCTCTATTTGGAT+TGG + Chr5:16823107-16823126 None:intergenic 45.0%
CTGCATGGTCTACTAAAGTC+TGG + Chr5:16825949-16825968 None:intergenic 45.0%
GACAAAGAGCGAGTTCTCAA+AGG - Chr5:16825161-16825180 MsG0580025311.01.T01:CDS 45.0%
GAGTAGCGTTCATCTTCTTC+CGG + Chr5:16826622-16826641 None:intergenic 45.0%
GCAGAAAGGGACTCAAAGAA+TGG - Chr5:16823562-16823581 MsG0580025311.01.T01:intron 45.0%
GGAACTCCCAGAAATATGTG+TGG - Chr5:16824413-16824432 MsG0580025311.01.T01:intron 45.0%
GGTTGGATTGTTGATGCTGA+TGG - Chr5:16822650-16822669 MsG0580025311.01.T01:intron 45.0%
GTATGGTAATTTCCCTCTCC+CGG - Chr5:16822580-16822599 MsG0580025311.01.T01:three_prime_UTR 45.0%
GTCAATTCTGCTGCATGACT+AGG + Chr5:16827873-16827892 None:intergenic 45.0%
GTTGAAAGTCAACCATCTGG+TGG - Chr5:16823436-16823455 MsG0580025311.01.T01:intron 45.0%
TAAACTCAGCTTGGGAACGA+GGG - Chr5:16828224-16828243 MsG0580025311.01.T01:intron 45.0%
TATCCAAAACCCATTGTGGG+AGG + Chr5:16825065-16825084 None:intergenic 45.0%
TCAGCAACCATCTTTGCTTC+AGG - Chr5:16828366-16828385 MsG0580025311.01.T01:intron 45.0%
TCCCAGAAATATGTGTGGTC+TGG - Chr5:16824418-16824437 MsG0580025311.01.T01:intron 45.0%
TCCTACCATAGCGTGGTTAA+CGG - Chr5:16826971-16826990 MsG0580025311.01.T01:intron 45.0%
TGGATGATGTTAGTTGCTGC+TGG - Chr5:16826087-16826106 MsG0580025311.01.T01:intron 45.0%
TTAAACTCAGCTTGGGAACG+AGG - Chr5:16828223-16828242 MsG0580025311.01.T01:intron 45.0%
TTCTACTCGTGATAGCTCGA+CGG + Chr5:16822541-16822560 None:intergenic 45.0%
TTGTAGTGCCCAGCATTATC+AGG + Chr5:16825842-16825861 None:intergenic 45.0%
! AACTACGCGGTCACTCTTTT+TGG - Chr5:16825807-16825826 MsG0580025311.01.T01:intron 45.0%
! ACTACGCGGTCACTCTTTTT+GGG - Chr5:16825808-16825827 MsG0580025311.01.T01:intron 45.0%
! ACTGGATTCTTTTGTGAGCG+AGG - Chr5:16825878-16825897 MsG0580025311.01.T01:intron 45.0%
! CCAATGACTCATTAGCTTCC+TGG + Chr5:16828007-16828026 None:intergenic 45.0%
! CCCATCCTTTCTGAAAAGGA+AGG + Chr5:16825587-16825606 None:intergenic 45.0%
! CCCTTCCTTTTCAGAAAGGA+TGG - Chr5:16825583-16825602 MsG0580025311.01.T01:CDS 45.0%
! CTAGAGGACCTGATAATGCT+GGG - Chr5:16825831-16825850 MsG0580025311.01.T01:intron 45.0%
! GAGTCATTGGTTGATCCAGA+TGG - Chr5:16828017-16828036 MsG0580025311.01.T01:intron 45.0%
! GTTCTCAAAGTACCACCAGA+TGG + Chr5:16823451-16823470 None:intergenic 45.0%
! TCACTTAGCGTGTCCTTTTG+AGG - Chr5:16824202-16824221 MsG0580025311.01.T01:CDS 45.0%
! TCATTAGCTTCCTGGTTGGA+AGG + Chr5:16827999-16828018 None:intergenic 45.0%
! TGACTCATTAGCTTCCTGGT+TGG + Chr5:16828003-16828022 None:intergenic 45.0%
! TTAACCACATGTGTCGGTGT+TGG + Chr5:16822874-16822893 None:intergenic 45.0%
!! AAAAGCACTGACATGGACAC+CGG + Chr5:16822773-16822792 None:intergenic 45.0%
!! AAATTGGTCTGGGAGCATCT+GGG - Chr5:16825549-16825568 MsG0580025311.01.T01:CDS 45.0%
!! AATGAAAAGTGCCGGTGATC+AGG + Chr5:16828337-16828356 None:intergenic 45.0%
!! ACGGAAGTGTTGGATCCATT+TGG - Chr5:16826990-16827009 MsG0580025311.01.T01:intron 45.0%
!! CATTGATTTCCCTCCCACAA+TGG - Chr5:16825052-16825071 MsG0580025311.01.T01:intron 45.0%
!! CGGAAGTGTTGGATCCATTT+GGG - Chr5:16826991-16827010 MsG0580025311.01.T01:intron 45.0%
!! TCCTGGTATTGGTGAGTTTC+AGG - Chr5:16825616-16825635 MsG0580025311.01.T01:CDS 45.0%
!! TGATGGATCCTGAAGGCATT+AGG - Chr5:16824314-16824333 MsG0580025311.01.T01:intron 45.0%
!!! CACCTCCTTTGTTTTCTTCC+TGG + Chr5:16826521-16826540 None:intergenic 45.0%
!!! CCCACAATGGGTTTTGGATA+TGG - Chr5:16825065-16825084 MsG0580025311.01.T01:intron 45.0%
!!! TTAGAATTTTTTTTTATTTT+GGG - Chr5:16823138-16823157 MsG0580025311.01.T01:CDS 5.0%
ACAAAGCTCCTACCATAGCG+TGG - Chr5:16826964-16826983 MsG0580025311.01.T01:intron 50.0%
AGAATGTGGCGAAGTACGGA+GGG - Chr5:16824747-16824766 MsG0580025311.01.T01:intron 50.0%
AGCTCCTTCCTAATGCCTTC+AGG + Chr5:16824325-16824344 None:intergenic 50.0%
AGTACGGAGGGAAAACGTAG+TGG - Chr5:16824759-16824778 MsG0580025311.01.T01:intron 50.0%
ATCCTTGCAGGTGAGATGAC+AGG - Chr5:16828534-16828553 MsG0580025311.01.T01:CDS 50.0%
CAACCAACCATGTTGGAAGG+AGG + Chr5:16822698-16822717 None:intergenic 50.0%
CACTTCCGTTAACCACGCTA+TGG + Chr5:16826979-16826998 None:intergenic 50.0%
CATGCAGCAGAATTGACTGC+AGG - Chr5:16827876-16827895 MsG0580025311.01.T01:intron 50.0%
CCGGTGATCAGGATCATTTC+TGG + Chr5:16828326-16828345 None:intergenic 50.0%
GAAATGGGGCCAAAAGAACG+AGG + Chr5:16825644-16825663 None:intergenic 50.0%
GGGACAAATTCCACCGGAAA+AGG - Chr5:16822464-16822483 MsG0580025311.01.T01:three_prime_UTR 50.0%
GGTGAAGGATTGCAAGAGAC+TGG - Chr5:16826492-16826511 MsG0580025311.01.T01:intron 50.0%
GTCCCTATGTAGCCACAACA+AGG + Chr5:16828620-16828639 None:intergenic 50.0%
TACCTAGCACCACATTCCTC+AGG - Chr5:16822828-16822847 MsG0580025311.01.T01:CDS 50.0%
TCATTCATATCAGCACGCGC+CGG + Chr5:16822602-16822621 None:intergenic 50.0%
TCCGTTAACCACGCTATGGT+AGG + Chr5:16826975-16826994 None:intergenic 50.0%
TCCTTGCAGGTGAGATGACA+GGG - Chr5:16828535-16828554 MsG0580025311.01.T01:CDS 50.0%
TGCCTTCAGGATCCATCAAC+TGG + Chr5:16824312-16824331 None:intergenic 50.0%
TGTCGAACACCTGAGGAATG+TGG + Chr5:16822840-16822859 None:intergenic 50.0%
TTAGCTGGACTCCGTCAGTA+TGG - Chr5:16822563-16822582 MsG0580025311.01.T01:three_prime_UTR 50.0%
TTGATCCAGATGGCCTGAGT+TGG - Chr5:16828027-16828046 MsG0580025311.01.T01:intron 50.0%
TTGTACCACCAGTATACGGC+AGG + Chr5:16827846-16827865 None:intergenic 50.0%
TTGTGGGTCGAGATCTTGTG+TGG + Chr5:16822372-16822391 None:intergenic 50.0%
TTTCAGAAAGGATGGGGTGG+AGG - Chr5:16825591-16825610 MsG0580025311.01.T01:CDS 50.0%
! AGCGTGGTTAACGGAAGTGT+TGG - Chr5:16826980-16826999 MsG0580025311.01.T01:intron 50.0%
! CCACCCCATCCTTTCTGAAA+AGG + Chr5:16825591-16825610 None:intergenic 50.0%
! CCTTTTCAGAAAGGATGGGG+TGG - Chr5:16825588-16825607 MsG0580025311.01.T01:CDS 50.0%
! CTTCTGATTGAAGGCGTGTC+CGG - Chr5:16822751-16822770 MsG0580025311.01.T01:CDS 50.0%
! GAACGAGGGTTGATCACTTC+TGG - Chr5:16828238-16828257 MsG0580025311.01.T01:intron 50.0%
! GCTAGAGGACCTGATAATGC+TGG - Chr5:16825830-16825849 MsG0580025311.01.T01:intron 50.0%
! GGAGGCTGATCAGGTGATTT+TGG - Chr5:16823627-16823646 MsG0580025311.01.T01:intron 50.0%
!! AATTGGTCTGGGAGCATCTG+GGG - Chr5:16825550-16825569 MsG0580025311.01.T01:CDS 50.0%
!! GAAATTGGTCTGGGAGCATC+TGG - Chr5:16825548-16825567 MsG0580025311.01.T01:CDS 50.0%
!! GGATCCTGAAGGCATTAGGA+AGG - Chr5:16824318-16824337 MsG0580025311.01.T01:intron 50.0%
!! GGTCACTCTTTTTGGGCTAG+AGG - Chr5:16825815-16825834 MsG0580025311.01.T01:intron 50.0%
!! TGCCAGTTGATGGATCCTGA+AGG - Chr5:16824307-16824326 MsG0580025311.01.T01:intron 50.0%
!! TGTTGGTGGGGCATTGTTGA+AGG - Chr5:16824388-16824407 MsG0580025311.01.T01:intron 50.0%
!! TTCCCTCCCACAATGGGTTT+TGG - Chr5:16825059-16825078 MsG0580025311.01.T01:intron 50.0%
ACCTTGCGGCAAATGATCCC+TGG + Chr5:16823414-16823433 None:intergenic 55.0%
AGGTTCCTGCCGTATACTGG+TGG - Chr5:16827838-16827857 MsG0580025311.01.T01:intron 55.0%
CACCTGAGGAATGTGGTGCT+AGG + Chr5:16822833-16822852 None:intergenic 55.0%
CAGCACATGTCGAACACCTG+AGG + Chr5:16822847-16822866 None:intergenic 55.0%
CATTCATATCAGCACGCGCC+GGG + Chr5:16822601-16822620 None:intergenic 55.0%
CGGAGGGAAAACGTAGTGGT+TGG - Chr5:16824763-16824782 MsG0580025311.01.T01:intron 55.0%
CTCAGGTGTTCGACATGTGC+TGG - Chr5:16822845-16822864 MsG0580025311.01.T01:CDS 55.0%
CTCCCTCCTTCCAACATGGT+TGG - Chr5:16822692-16822711 MsG0580025311.01.T01:intron 55.0%
CTTGTGACTGAGGTTCCCCT+TGG - Chr5:16827053-16827072 MsG0580025311.01.T01:intron 55.0%
GAGAATGTGGCGAAGTACGG+AGG - Chr5:16824746-16824765 MsG0580025311.01.T01:intron 55.0%
GGGGTAAGTAATCGGAGCTG+TGG + Chr5:16822400-16822419 None:intergenic 55.0%
GTGTCCAACACCGACACATG+TGG - Chr5:16822867-16822886 MsG0580025311.01.T01:CDS 55.0%
GTGTCTCCCTCCTTCCAACA+TGG - Chr5:16822688-16822707 MsG0580025311.01.T01:intron 55.0%
TCCAGGGATCATTTGCCGCA+AGG - Chr5:16823410-16823429 MsG0580025311.01.T01:intron 55.0%
TCCCTGTCATCTCACCTGCA+AGG + Chr5:16828539-16828558 None:intergenic 55.0%
TGACTGCTTGGAGGCTGATC+AGG - Chr5:16823618-16823637 MsG0580025311.01.T01:intron 55.0%
TGCAGGTTCCTGCCGTATAC+TGG - Chr5:16827835-16827854 MsG0580025311.01.T01:intron 55.0%
TGTTGGAAGGAGGGAGACAC+TGG + Chr5:16822688-16822707 None:intergenic 55.0%
!! GGGTGGAGGTATCCTGGTAT+TGG - Chr5:16825605-16825624 MsG0580025311.01.T01:CDS 55.0%
ACCTGCCAACTCAGGCCATC+TGG + Chr5:16828035-16828054 None:intergenic 60.0%
AGGAGGGAGACACTGGCGAT+AGG + Chr5:16822681-16822700 None:intergenic 60.0%
CGCAGAGCTGCCAAACTACG+CGG - Chr5:16825794-16825813 MsG0580025311.01.T01:intron 60.0%
! CGGAGCTGTGGTCGCTTTGT+GGG + Chr5:16822388-16822407 None:intergenic 60.0%
! TCCAGATGGCCTGAGTTGGC+AGG - Chr5:16828031-16828050 MsG0580025311.01.T01:intron 60.0%
! TCGGAGCTGTGGTCGCTTTG+TGG + Chr5:16822389-16822408 None:intergenic 60.0%
!! AGGATGGGGTGGAGGTATCC+TGG - Chr5:16825599-16825618 MsG0580025311.01.T01:CDS 60.0%
!! GGTGGGGCATTGTTGAAGGC+TGG - Chr5:16824392-16824411 MsG0580025311.01.T01:intron 60.0%
ATATCAGCACGCGCCGGGAG+AGG + Chr5:16822596-16822615 None:intergenic 65.0%
GCGGCGGGGACAAATTCCAC+CGG - Chr5:16822458-16822477 MsG0580025311.01.T01:three_prime_UTR 65.0%
TAGGCGGCGGGGTTGTGGTT+GGG + Chr5:16822420-16822439 None:intergenic 65.0%
TATCAGCACGCGCCGGGAGA+GGG + Chr5:16822595-16822614 None:intergenic 65.0%
! ACTTGCTGCTCTCGCGCGTG+AGG - Chr5:16822625-16822644 MsG0580025311.01.T01:intron 65.0%
AGGCGGCGGGGTTGTGGTTG+GGG + Chr5:16822419-16822438 None:intergenic 70.0%
ATTTGTCCCCGCCGCCGTGG+CGG + Chr5:16822453-16822472 None:intergenic 70.0%
CTCTCGCGCGTGAGGCTGGT+TGG - Chr5:16822633-16822652 MsG0580025311.01.T01:intron 70.0%
GGAATTTGTCCCCGCCGCCG+TGG + Chr5:16822456-16822475 None:intergenic 70.0%
GTAGGCGGCGGGGTTGTGGT+TGG + Chr5:16822421-16822440 None:intergenic 70.0%
CCACAACCCCGCCGCCTACG+CGG - Chr5:16822422-16822441 MsG0580025311.01.T01:three_prime_UTR 75.0%
CCTACGCGGCTTCGCCGCCA+CGG - Chr5:16822436-16822455 MsG0580025311.01.T01:three_prime_UTR 75.0%
GCTGCTCTCGCGCGTGAGGC+TGG - Chr5:16822629-16822648 MsG0580025311.01.T01:intron 75.0%
TGGCGGCGAAGCCGCGTAGG+CGG + Chr5:16822436-16822455 None:intergenic 75.0%
! ACGCGGCTTCGCCGCCACGG+CGG - Chr5:16822439-16822458 MsG0580025311.01.T01:three_prime_UTR 80.0%
! CCGCGTAGGCGGCGGGGTTG+TGG + Chr5:16822425-16822444 None:intergenic 80.0%
! CCGTGGCGGCGAAGCCGCGT+AGG + Chr5:16822439-16822458 None:intergenic 80.0%
! CGGCGAAGCCGCGTAGGCGG+CGG + Chr5:16822433-16822452 None:intergenic 80.0%
! GCGAAGCCGCGTAGGCGGCG+GGG + Chr5:16822431-16822450 None:intergenic 80.0%
! GGCGAAGCCGCGTAGGCGGC+GGG + Chr5:16822432-16822451 None:intergenic 80.0%
! CGGCTTCGCCGCCACGGCGG+CGG - Chr5:16822442-16822461 MsG0580025311.01.T01:three_prime_UTR 85.0%
! GCTTCGCCGCCACGGCGGCG+GGG - Chr5:16822444-16822463 MsG0580025311.01.T01:three_prime_UTR 85.0%
! GGCTTCGCCGCCACGGCGGC+GGG - Chr5:16822443-16822462 MsG0580025311.01.T01:three_prime_UTR 85.0%
Chromosome Type Strat End Strand Name
Chr5 gene 16822237 16828937 16822237 ID=MsG0580025311.01;Name=MsG0580025311.01
Chr5 mRNA 16822237 16828937 16822237 ID=MsG0580025311.01.T01;Parent=MsG0580025311.01;Name=MsG0580025311.01.T01;_AED=0.43;_eAED=0.46;_QI=54|0.7|0.81|1|0.9|0.81|11|371|640
Chr5 exon 16822237 16822630 16822237 ID=MsG0580025311.01.T01:exon:28434;Parent=MsG0580025311.01.T01
Chr5 exon 16822738 16822954 16822738 ID=MsG0580025311.01.T01:exon:28433;Parent=MsG0580025311.01.T01
Chr5 exon 16823122 16823334 16823122 ID=MsG0580025311.01.T01:exon:28432;Parent=MsG0580025311.01.T01
Chr5 exon 16824110 16824244 16824110 ID=MsG0580025311.01.T01:exon:28431;Parent=MsG0580025311.01.T01
Chr5 exon 16825138 16825410 16825138 ID=MsG0580025311.01.T01:exon:28430;Parent=MsG0580025311.01.T01
Chr5 exon 16825537 16825701 16825537 ID=MsG0580025311.01.T01:exon:28429;Parent=MsG0580025311.01.T01
Chr5 exon 16826685 16826888 16826685 ID=MsG0580025311.01.T01:exon:28428;Parent=MsG0580025311.01.T01
Chr5 exon 16827064 16827144 16827064 ID=MsG0580025311.01.T01:exon:28427;Parent=MsG0580025311.01.T01
Chr5 exon 16827535 16827759 16827535 ID=MsG0580025311.01.T01:exon:28426;Parent=MsG0580025311.01.T01
Chr5 exon 16828465 16828847 16828465 ID=MsG0580025311.01.T01:exon:28425;Parent=MsG0580025311.01.T01
Chr5 exon 16828880 16828937 16828880 ID=MsG0580025311.01.T01:exon:28424;Parent=MsG0580025311.01.T01
Chr5 five_prime_UTR 16828884 16828937 16828884 ID=MsG0580025311.01.T01:five_prime_utr;Parent=MsG0580025311.01.T01
Chr5 CDS 16828880 16828883 16828880 ID=MsG0580025311.01.T01:cds;Parent=MsG0580025311.01.T01
Chr5 CDS 16828465 16828847 16828465 ID=MsG0580025311.01.T01:cds;Parent=MsG0580025311.01.T01
Chr5 CDS 16827535 16827759 16827535 ID=MsG0580025311.01.T01:cds;Parent=MsG0580025311.01.T01
Chr5 CDS 16827064 16827144 16827064 ID=MsG0580025311.01.T01:cds;Parent=MsG0580025311.01.T01
Chr5 CDS 16826685 16826888 16826685 ID=MsG0580025311.01.T01:cds;Parent=MsG0580025311.01.T01
Chr5 CDS 16825537 16825701 16825537 ID=MsG0580025311.01.T01:cds;Parent=MsG0580025311.01.T01
Chr5 CDS 16825138 16825410 16825138 ID=MsG0580025311.01.T01:cds;Parent=MsG0580025311.01.T01
Chr5 CDS 16824110 16824244 16824110 ID=MsG0580025311.01.T01:cds;Parent=MsG0580025311.01.T01
Chr5 CDS 16823122 16823334 16823122 ID=MsG0580025311.01.T01:cds;Parent=MsG0580025311.01.T01
Chr5 CDS 16822738 16822954 16822738 ID=MsG0580025311.01.T01:cds;Parent=MsG0580025311.01.T01
Chr5 CDS 16822608 16822630 16822608 ID=MsG0580025311.01.T01:cds;Parent=MsG0580025311.01.T01
Chr5 three_prime_UTR 16822237 16822607 16822237 ID=MsG0580025311.01.T01:three_prime_utr;Parent=MsG0580025311.01.T01
Gene Sequence

>MsG0580025311.01.T01

ATGAAATTGCGAACGAAAATGAAGAACACAACCGAAGATGCTACTTCCACACAAGATCTCGACCCACAAAGCGACCACAGCTCCGATTACTTACCCCAACCACAACCCCGCCGCCTACGCGGCTTCGCCGCCACGGCGGCGGGGACAAATTCCACCGGAAAAGGAAAAAAAGAGCGAGAGAAAGAAAAGGAACGAACGAAGCTAAGGGAACGACACCGTCGAGCTATCACGAGTAGAATGTTAGCTGGACTCCGTCAGTATGGTAATTTCCCTCTCCCGGCGCGTGCTGATATGAATGATGTACTTGCTGCTCTCGCGCGTGAGGCTGGTTGGATTGTTGATGCTGATGGAACTACCTATCGCCAGTGTCTCCCTCCTTCCAACATGGGATCATTTGCCGCAAGGTCAGTTGAAAGTCAACCATCTGGTGGTACTTTGAGAACTTGTTCGGTTAAGGAAACACTAGAGAATCAGTCACCGGGACTTAGAGTTGATGAATGTGTGTCACCTGCATCTATTGATTCTGTTTTAATTGCAGAAAGGGACTCAAAGAATGGAAACTATGCAAGTGTAAGCCCAATCAATTCAACTGACTGCTTGGAGGCTGATCAGCTTATGCAAGATATTCATTCTGGGGTGCATGAAAATGACTTCAATTGCACACCATATGTTCCTGTTTACATAAAACTCCCAGCTGGTATTATTAACAAATTTTGCCAGTTGATGGATCCTGAAGGCATTAGGAAGGAGCTAATCCATATTAAGTCCTTAAATATTGATGGTGTTGTTATGGATTGTTGGTGGGGCATTGTTGAAGGCTGGAACTCCCAGAAATATGTGTGGTCTGGGTATAGGGAGCTTTTTAGTATAATTAGAGAATTCAAGCTGAATATACAGGTCTATTTTGATATGATGAGAAGCTTTCGGACAGAGTTTGATGACCTGTTTGCAGAAGGTATGATTGATGCTGTAGAAATTGGTCTGGGAGCATCTGGGGAGCTGAAATACCCTTCCTTTTCAGAAAGGATGGGGTGGAGGTATCCTGGTATTGGTGAGTTTCAGTGCTATGATAAATACTTGCAACATAGTCTGCGCAGAGCTGCCAAACTACGCGGTCACTCTTTTTGGGCTAGAGGACCTGATAATGCTGGGCACTACAACTCTATGCCACATGAGACTGGATTCTTTTGTGAGCGAGGTGATTATGACAACTATTATGGACGCTTCTTCTTACATTGGTACTCCCAGACTTTAGTAGACCATGCAGATAATGTTTTGTCTCTTGCAAACCTTGCTTTTGAGGGAACAAAAATTATTGTCAAGGTAGTTTTTCTGTGTGGTTTAGTTGAGAAAAGGGTAAATTTGGGCTACAAAGCTCCTACCATAGCGTGGTTAACGGAAGTGTTGGATCCATTTGGGTCTATTGTAGATAGTCTTACCTTTGATTCACGACTCAAACTTGTGACTGAGGTTCCTGCCGTATACTGGTGGTACAAGACTCCTAGTCATGCAGCAGAATTGACTGCAGGATATCACAATCCCACAAATCAGGATGGATACTCTCTTGTGTTTGAGGTTCTGAAAAAACACGCTGTCACCATGAAATTTGTCTGCTTAGGATTTAATCCTTCCAACCAGGAAGCTAATGAGTCATTGGTTGATCCAGATGGCCTGAGTTGGCAGGTATTAAACTCAGCTTGGGAACGAGGGTTGATCACTTCTGGAGAGAATGCAATCTTTTGCTATGATAGAGAAAGGTACGAGAGATTGATTGAGATGGCAAAGCCCAGAAATGATCCTGATCACCGGCACTTTTCATTCTTTGTTTATCAGCAACCATCTTTGCTTCAGGGAAATGTTTGCCTGTCAGAATTGGATTTCTTCATCAAATGCATGCATGGTGAGATGACAGGGAATCTTTAA
Protein sequence

>MsG0580025311.01.T01

MKLRTKMKNTTEDATSTQDLDPQSDHSSDYLPQPQPRRLRGFAATAAGTNSTGKGKKEREKEKERTKLRERHRRAITSRMLAGLRQYGNFPLPARADMNDVLAALAREAGWIVDADGTTYRQCLPPSNMGSFAARSVESQPSGGTLRTCSVKETLENQSPGLRVDECVSPASIDSVLIAERDSKNGNYASVSPINSTDCLEADQLMQDIHSGVHENDFNCTPYVPVYIKLPAGIINKFCQLMDPEGIRKELIHIKSLNIDGVVMDCWWGIVEGWNSQKYVWSGYRELFSIIREFKLNIQVYFDMMRSFRTEFDDLFAEGMIDAVEIGLGASGELKYPSFSERMGWRYPGIGEFQCYDKYLQHSLRRAAKLRGHSFWARGPDNAGHYNSMPHETGFFCERGDYDNYYGRFFLHWYSQTLVDHADNVLSLANLAFEGTKIIVKVVFLCGLVEKRVNLGYKAPTIAWLTEVLDPFGSIVDSLTFDSRLKLVTEVPAVYWWYKTPSHAAELTAGYHNPTNQDGYSLVFEVLKKHAVTMKFVCLGFNPSNQEANESLVDPDGLSWQVLNSAWERGLITSGENAIFCYDRERYERLIEMAKPRNDPDHRHFSFFVYQQPSLLQGNVCLSELDFFIKCMHGEMTGNL*