Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580025346.01.T02 | XP_003612592.1 | 78.873 | 71 | 10 | 1 | 1 | 71 | 110 | 175 | 2.63E-31 | 117 |
MsG0580025346.01.T01 | XP_003612592.1 | 86.25 | 160 | 16 | 2 | 1 | 159 | 21 | 175 | 5.11E-95 | 282 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580025346.01.T01 | P93823 | 34.091 | 132 | 71 | 4 | 1 | 119 | 52 | 180 | 2.35E-18 | 83.6 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580025346.01.T01 | G7K6T0 | 86.250 | 160 | 16 | 2 | 1 | 159 | 21 | 175 | 2.44e-95 | 282 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|---|---|
MsG0280010800.01 | MsG0580025346.01 | PPI |
MsG0280010800.01 | MsG0580025346.01 | PPI |
MsG0580025346.01 | MsG0280010802.01 | PPI |
MsG0280010800.01 | MsG0580025346.01 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580025346.01.T02 | MTR_5g026730 | 78.873 | 71 | 10 | 1 | 1 | 71 | 110 | 175 | 3.19e-35 | 117 |
MsG0580025346.01.T02 | MTR_5g026720 | 59.155 | 71 | 9 | 2 | 1 | 71 | 109 | 159 | 2.65e-20 | 79.0 |
MsG0580025346.01.T02 | MTR_8g071815 | 50.000 | 72 | 30 | 3 | 1 | 68 | 106 | 175 | 1.06e-15 | 67.4 |
MsG0580025346.01.T02 | MTR_5g064980 | 44.681 | 47 | 26 | 0 | 1 | 47 | 153 | 199 | 6.75e-12 | 58.9 |
MsG0580025346.01.T02 | MTR_4g120270 | 47.458 | 59 | 24 | 2 | 1 | 59 | 120 | 171 | 1.28e-11 | 57.8 |
MsG0580025346.01.T02 | MTR_2g090950 | 50.000 | 44 | 22 | 0 | 1 | 44 | 139 | 182 | 3.24e-11 | 56.6 |
MsG0580025346.01.T02 | MTR_1g082550 | 42.308 | 52 | 30 | 0 | 1 | 52 | 143 | 194 | 3.75e-11 | 57.0 |
MsG0580025346.01.T02 | MTR_2g436100 | 62.500 | 32 | 12 | 0 | 1 | 32 | 135 | 166 | 4.35e-11 | 56.6 |
MsG0580025346.01.T02 | MTR_4g030070 | 38.095 | 63 | 39 | 0 | 1 | 63 | 126 | 188 | 5.07e-11 | 55.8 |
MsG0580025346.01.T02 | MTR_5g064890 | 47.059 | 51 | 23 | 2 | 1 | 50 | 170 | 217 | 5.10e-11 | 56.6 |
MsG0580025346.01.T02 | MTR_2g090905 | 65.625 | 32 | 11 | 0 | 1 | 32 | 87 | 118 | 7.53e-11 | 53.9 |
MsG0580025346.01.T01 | MTR_5g026730 | 86.250 | 160 | 16 | 2 | 1 | 159 | 21 | 175 | 6.19e-99 | 282 |
MsG0580025346.01.T01 | MTR_5g026720 | 64.417 | 163 | 30 | 5 | 1 | 159 | 21 | 159 | 1.64e-63 | 192 |
MsG0580025346.01.T01 | MTR_8g071815 | 46.875 | 160 | 75 | 5 | 1 | 156 | 22 | 175 | 3.49e-39 | 131 |
MsG0580025346.01.T01 | MTR_2g041200 | 38.843 | 121 | 73 | 1 | 1 | 120 | 36 | 156 | 3.23e-27 | 100 |
MsG0580025346.01.T01 | MTR_4g120270 | 40.708 | 113 | 53 | 4 | 35 | 147 | 73 | 171 | 1.80e-19 | 82.8 |
MsG0580025346.01.T01 | MTR_7g079280 | 40.476 | 84 | 49 | 1 | 40 | 122 | 74 | 157 | 5.63e-19 | 79.3 |
MsG0580025346.01.T01 | MTR_4g093830 | 41.509 | 106 | 53 | 3 | 36 | 141 | 124 | 220 | 5.76e-19 | 82.4 |
MsG0580025346.01.T01 | MTR_2g436100 | 43.299 | 97 | 46 | 3 | 24 | 120 | 79 | 166 | 7.31e-19 | 81.3 |
MsG0580025346.01.T01 | MTR_2g096350 | 38.000 | 100 | 59 | 2 | 42 | 141 | 107 | 203 | 7.88e-19 | 80.1 |
MsG0580025346.01.T01 | MTR_5g024730 | 31.206 | 141 | 90 | 3 | 7 | 146 | 44 | 178 | 1.03e-18 | 79.7 |
MsG0580025346.01.T01 | MTR_7g117540 | 44.737 | 76 | 36 | 1 | 46 | 121 | 80 | 149 | 1.32e-18 | 80.5 |
MsG0580025346.01.T01 | MTR_8g073120 | 37.273 | 110 | 64 | 2 | 7 | 116 | 37 | 141 | 1.37e-18 | 79.0 |
MsG0580025346.01.T01 | MTR_8g089880 | 50.704 | 71 | 30 | 2 | 46 | 116 | 131 | 196 | 2.22e-18 | 79.7 |
MsG0580025346.01.T01 | MTR_5g064890 | 42.553 | 94 | 45 | 4 | 46 | 138 | 132 | 217 | 2.50e-18 | 80.5 |
MsG0580025346.01.T01 | MTR_3g464780 | 45.349 | 86 | 42 | 2 | 34 | 117 | 94 | 176 | 3.21e-18 | 79.0 |
MsG0580025346.01.T01 | MTR_1g082550 | 48.529 | 68 | 35 | 0 | 73 | 140 | 127 | 194 | 4.49e-18 | 80.1 |
MsG0580025346.01.T01 | MTR_4g063070 | 44.156 | 77 | 40 | 1 | 39 | 115 | 305 | 378 | 4.57e-18 | 80.1 |
MsG0580025346.01.T01 | MTR_7g059360 | 46.575 | 73 | 36 | 1 | 51 | 123 | 139 | 208 | 1.30e-17 | 77.0 |
MsG0580025346.01.T01 | MTR_7g076250 | 49.231 | 65 | 29 | 1 | 51 | 115 | 72 | 132 | 1.49e-17 | 75.9 |
MsG0580025346.01.T01 | MTR_5g064980 | 47.619 | 63 | 33 | 0 | 73 | 135 | 137 | 199 | 5.17e-17 | 77.0 |
MsG0580025346.01.T01 | MTR_8g028465 | 37.838 | 111 | 56 | 3 | 29 | 139 | 81 | 178 | 5.59e-17 | 74.7 |
MsG0580025346.01.T01 | MTR_3g091620 | 40.964 | 83 | 40 | 1 | 34 | 116 | 97 | 170 | 6.57e-17 | 76.6 |
MsG0580025346.01.T01 | MTR_2g009310 | 45.570 | 79 | 38 | 2 | 46 | 124 | 139 | 212 | 6.70e-17 | 76.6 |
MsG0580025346.01.T01 | MTR_3g081030 | 46.970 | 66 | 35 | 0 | 68 | 133 | 114 | 179 | 1.11e-16 | 74.3 |
MsG0580025346.01.T01 | MTR_5g030010 | 29.586 | 169 | 94 | 6 | 1 | 147 | 66 | 231 | 2.00e-16 | 75.5 |
MsG0580025346.01.T01 | MTR_8g023400 | 38.318 | 107 | 53 | 4 | 61 | 159 | 107 | 208 | 2.04e-16 | 75.1 |
MsG0580025346.01.T01 | MTR_3g116000 | 65.116 | 43 | 15 | 0 | 73 | 115 | 104 | 146 | 2.07e-16 | 73.2 |
MsG0580025346.01.T01 | MTR_1g074190 | 35.938 | 128 | 66 | 6 | 5 | 119 | 53 | 177 | 2.47e-16 | 75.1 |
MsG0580025346.01.T01 | MTR_3g110190 | 31.111 | 135 | 79 | 3 | 3 | 129 | 20 | 148 | 2.89e-16 | 74.7 |
MsG0580025346.01.T01 | MTR_7g073200 | 49.254 | 67 | 29 | 1 | 51 | 117 | 90 | 151 | 3.68e-16 | 72.0 |
MsG0580025346.01.T01 | MTR_3g094000 | 36.170 | 94 | 57 | 1 | 29 | 122 | 78 | 168 | 3.89e-16 | 72.0 |
MsG0580025346.01.T01 | MTR_5g022920 | 51.724 | 58 | 28 | 0 | 58 | 115 | 174 | 231 | 4.05e-16 | 73.2 |
MsG0580025346.01.T01 | MTR_1g043410 | 27.152 | 151 | 92 | 3 | 6 | 140 | 46 | 194 | 4.30e-16 | 73.9 |
MsG0580025346.01.T01 | MTR_8g032690 | 46.774 | 62 | 28 | 1 | 56 | 117 | 7 | 63 | 5.54e-16 | 69.7 |
MsG0580025346.01.T01 | MTR_4g030070 | 37.349 | 83 | 52 | 0 | 69 | 151 | 106 | 188 | 6.36e-16 | 72.4 |
MsG0580025346.01.T01 | MTR_7g113800 | 34.921 | 126 | 69 | 3 | 3 | 123 | 53 | 170 | 6.87e-16 | 73.9 |
MsG0580025346.01.T01 | MTR_2g090905 | 42.254 | 71 | 40 | 1 | 51 | 120 | 48 | 118 | 8.17e-16 | 69.7 |
MsG0580025346.01.T01 | MTR_7g116200 | 37.079 | 89 | 50 | 1 | 47 | 135 | 73 | 155 | 1.08e-15 | 70.9 |
MsG0580025346.01.T01 | MTR_8g027745 | 34.328 | 134 | 62 | 4 | 3 | 122 | 242 | 363 | 1.16e-15 | 73.2 |
MsG0580025346.01.T01 | MTR_2g090950 | 50.000 | 60 | 30 | 0 | 73 | 132 | 123 | 182 | 2.44e-15 | 70.9 |
MsG0580025346.01.T01 | MTR_8g092960 | 58.696 | 46 | 19 | 0 | 70 | 115 | 127 | 172 | 2.46e-15 | 70.5 |
MsG0580025346.01.T01 | MTR_3g078470 | 42.254 | 71 | 38 | 1 | 46 | 116 | 80 | 147 | 2.52e-15 | 70.5 |
MsG0580025346.01.T01 | MTR_8g066780 | 29.921 | 127 | 85 | 1 | 1 | 123 | 66 | 192 | 2.52e-15 | 72.0 |
MsG0580025346.01.T01 | MTR_8g092840 | 58.696 | 46 | 19 | 0 | 70 | 115 | 137 | 182 | 2.71e-15 | 70.9 |
MsG0580025346.01.T01 | MTR_8g092970 | 58.696 | 46 | 19 | 0 | 70 | 115 | 128 | 173 | 2.98e-15 | 70.5 |
MsG0580025346.01.T01 | MTR_5g066250 | 53.846 | 52 | 24 | 0 | 73 | 124 | 160 | 211 | 3.29e-15 | 72.0 |
MsG0580025346.01.T01 | MTR_8g009190 | 34.951 | 103 | 65 | 1 | 41 | 143 | 75 | 175 | 3.68e-15 | 71.6 |
MsG0580025346.01.T01 | MTR_8g092990 | 58.696 | 46 | 19 | 0 | 70 | 115 | 138 | 183 | 4.19e-15 | 70.1 |
MsG0580025346.01.T01 | MTR_4g106680 | 43.421 | 76 | 38 | 1 | 46 | 121 | 110 | 180 | 4.25e-15 | 71.2 |
MsG0580025346.01.T01 | MTR_3g086700 | 43.056 | 72 | 37 | 1 | 64 | 131 | 62 | 133 | 4.60e-15 | 69.3 |
MsG0580025346.01.T01 | MTR_8g092985 | 41.026 | 78 | 42 | 2 | 38 | 115 | 107 | 180 | 5.39e-15 | 69.7 |
MsG0580025346.01.T01 | MTR_3g100400 | 56.250 | 48 | 21 | 0 | 73 | 120 | 156 | 203 | 6.25e-15 | 71.2 |
MsG0580025346.01.T01 | MTR_8g092930 | 56.522 | 46 | 20 | 0 | 70 | 115 | 136 | 181 | 6.80e-15 | 69.7 |
MsG0580025346.01.T01 | MTR_3g071300 | 29.921 | 127 | 73 | 2 | 5 | 124 | 40 | 157 | 7.40e-15 | 68.6 |
MsG0580025346.01.T01 | MTR_3g078450 | 43.662 | 71 | 37 | 1 | 46 | 116 | 80 | 147 | 7.58e-15 | 69.3 |
MsG0580025346.01.T01 | MTR_4g129420 | 51.667 | 60 | 29 | 0 | 73 | 132 | 144 | 203 | 7.72e-15 | 71.2 |
MsG0580025346.01.T01 | MTR_3g099650 | 52.941 | 51 | 24 | 0 | 73 | 123 | 136 | 186 | 8.39e-15 | 70.9 |
MsG0580025346.01.T01 | MTR_5g071930 | 32.174 | 115 | 60 | 2 | 12 | 116 | 26 | 132 | 8.65e-15 | 68.9 |
MsG0580025346.01.T01 | MTR_3g012550 | 42.424 | 66 | 38 | 0 | 65 | 130 | 100 | 165 | 1.04e-14 | 68.2 |
MsG0580025346.01.T01 | MTR_3g095560 | 56.522 | 46 | 20 | 0 | 70 | 115 | 133 | 178 | 1.17e-14 | 69.3 |
MsG0580025346.01.T01 | MTR_6g087150 | 60.465 | 43 | 17 | 0 | 73 | 115 | 119 | 161 | 1.32e-14 | 70.1 |
MsG0580025346.01.T01 | MTR_3g086730 | 43.056 | 72 | 37 | 1 | 64 | 131 | 62 | 133 | 1.36e-14 | 68.9 |
MsG0580025346.01.T01 | MTR_7g116210 | 35.955 | 89 | 51 | 1 | 47 | 135 | 15 | 97 | 1.50e-14 | 66.2 |
MsG0580025346.01.T01 | MTR_7g116220 | 40.845 | 71 | 40 | 1 | 46 | 116 | 74 | 142 | 1.51e-14 | 67.8 |
MsG0580025346.01.T01 | MTR_1g056350 | 38.095 | 84 | 46 | 2 | 39 | 122 | 75 | 152 | 1.66e-14 | 67.4 |
MsG0580025346.01.T01 | MTR_1g492830 | 31.000 | 100 | 68 | 1 | 58 | 157 | 73 | 171 | 1.66e-14 | 68.6 |
MsG0580025346.01.T01 | MTR_4g022410 | 34.211 | 114 | 65 | 3 | 6 | 119 | 56 | 159 | 1.79e-14 | 67.8 |
MsG0580025346.01.T01 | MTR_8g099495 | 36.559 | 93 | 43 | 2 | 39 | 115 | 297 | 389 | 1.90e-14 | 70.1 |
MsG0580025346.01.T01 | MTR_3g087900 | 33.962 | 106 | 58 | 5 | 52 | 155 | 55 | 150 | 2.10e-14 | 67.0 |
MsG0580025346.01.T01 | MTR_1g070140 | 30.303 | 132 | 74 | 5 | 1 | 119 | 50 | 176 | 3.54e-14 | 68.9 |
MsG0580025346.01.T01 | MTR_2g055790 | 48.980 | 49 | 25 | 0 | 73 | 121 | 100 | 148 | 3.73e-14 | 67.0 |
MsG0580025346.01.T01 | MTR_2g044570 | 43.836 | 73 | 37 | 1 | 51 | 123 | 65 | 133 | 3.84e-14 | 68.6 |
MsG0580025346.01.T01 | MTR_5g082940 | 51.020 | 49 | 24 | 0 | 69 | 117 | 99 | 147 | 4.40e-14 | 66.2 |
MsG0580025346.01.T01 | MTR_7g079290 | 38.158 | 76 | 46 | 1 | 46 | 121 | 129 | 203 | 5.33e-14 | 67.0 |
MsG0580025346.01.T01 | MTR_8g099515 | 38.000 | 100 | 54 | 3 | 21 | 117 | 287 | 381 | 6.33e-14 | 68.6 |
MsG0580025346.01.T01 | MTR_7g108855 | 36.842 | 95 | 57 | 1 | 40 | 134 | 64 | 155 | 6.54e-14 | 66.6 |
MsG0580025346.01.T01 | MTR_2g035800 | 43.077 | 65 | 32 | 1 | 51 | 115 | 85 | 144 | 7.89e-14 | 65.5 |
MsG0580025346.01.T01 | MTR_7g096690 | 34.513 | 113 | 65 | 4 | 27 | 131 | 52 | 163 | 8.05e-14 | 67.8 |
MsG0580025346.01.T01 | MTR_8g093010 | 54.348 | 46 | 21 | 0 | 70 | 115 | 131 | 176 | 8.79e-14 | 66.6 |
MsG0580025346.01.T01 | MTR_5g064990 | 53.061 | 49 | 23 | 0 | 73 | 121 | 143 | 191 | 1.13e-13 | 67.8 |
MsG0580025346.01.T01 | MTR_5g034790 | 62.791 | 43 | 16 | 0 | 73 | 115 | 142 | 184 | 1.23e-13 | 67.4 |
MsG0580025346.01.T01 | MTR_8g074900 | 50.000 | 52 | 26 | 0 | 64 | 115 | 171 | 222 | 1.30e-13 | 66.2 |
MsG0580025346.01.T01 | MTR_1g100737 | 55.556 | 45 | 20 | 0 | 73 | 117 | 123 | 167 | 1.34e-13 | 65.5 |
MsG0580025346.01.T01 | MTR_4g108830 | 46.269 | 67 | 30 | 1 | 49 | 115 | 128 | 188 | 1.59e-13 | 65.5 |
MsG0580025346.01.T01 | MTR_6g055030 | 52.727 | 55 | 26 | 0 | 63 | 117 | 116 | 170 | 1.61e-13 | 67.0 |
MsG0580025346.01.T01 | MTR_6g007737 | 33.673 | 98 | 60 | 1 | 20 | 117 | 111 | 203 | 1.63e-13 | 67.0 |
MsG0580025346.01.T01 | MTR_4g108830 | 46.269 | 67 | 30 | 1 | 49 | 115 | 156 | 216 | 1.70e-13 | 65.9 |
MsG0580025346.01.T01 | MTR_7g116180 | 39.437 | 71 | 41 | 1 | 46 | 116 | 71 | 139 | 1.92e-13 | 64.7 |
MsG0580025346.01.T01 | MTR_1g070425 | 39.437 | 71 | 41 | 1 | 46 | 116 | 72 | 140 | 2.88e-13 | 64.3 |
MsG0580025346.01.T01 | MTR_4g064550 | 45.161 | 62 | 32 | 2 | 55 | 115 | 196 | 256 | 4.13e-13 | 65.5 |
MsG0580025346.01.T01 | MTR_1g090460 | 32.456 | 114 | 55 | 2 | 14 | 127 | 58 | 149 | 4.18e-13 | 63.5 |
MsG0580025346.01.T01 | MTR_8g028815 | 32.075 | 106 | 58 | 4 | 22 | 125 | 52 | 145 | 4.51e-13 | 63.5 |
MsG0580025346.01.T01 | MTR_4g094725 | 58.140 | 43 | 18 | 0 | 73 | 115 | 106 | 148 | 5.18e-13 | 63.2 |
MsG0580025346.01.T01 | MTR_4g064560 | 46.552 | 58 | 29 | 2 | 59 | 115 | 194 | 250 | 5.36e-13 | 65.1 |
MsG0580025346.01.T01 | MTR_8g019710 | 45.614 | 57 | 31 | 0 | 60 | 116 | 41 | 97 | 9.65e-13 | 62.0 |
MsG0580025346.01.T01 | MTR_5g009200 | 45.098 | 51 | 28 | 0 | 65 | 115 | 342 | 392 | 1.01e-12 | 65.1 |
MsG0580025346.01.T01 | MTR_4g056590 | 38.462 | 78 | 40 | 2 | 38 | 115 | 96 | 165 | 1.15e-12 | 63.2 |
MsG0580025346.01.T01 | MTR_1g090480 | 38.806 | 67 | 35 | 1 | 55 | 121 | 90 | 150 | 1.19e-12 | 62.4 |
MsG0580025346.01.T01 | MTR_8g063660 | 57.778 | 45 | 19 | 0 | 73 | 117 | 94 | 138 | 1.95e-12 | 63.9 |
MsG0580025346.01.T01 | MTR_4g116460 | 36.364 | 88 | 50 | 4 | 32 | 116 | 443 | 527 | 3.43e-12 | 63.5 |
MsG0580025346.01.T01 | MTR_4g116460 | 36.364 | 88 | 50 | 4 | 32 | 116 | 400 | 484 | 3.43e-12 | 63.5 |
MsG0580025346.01.T01 | MTR_1g090450 | 53.333 | 45 | 21 | 0 | 77 | 121 | 111 | 155 | 3.67e-12 | 60.8 |
MsG0580025346.01.T01 | MTR_3g114500 | 33.333 | 126 | 68 | 4 | 3 | 128 | 17 | 126 | 3.96e-12 | 60.1 |
MsG0580025346.01.T01 | MTR_5g092750 | 55.814 | 43 | 19 | 0 | 73 | 115 | 185 | 227 | 4.76e-12 | 62.0 |
MsG0580025346.01.T01 | MTR_3g091200 | 48.214 | 56 | 29 | 0 | 62 | 117 | 320 | 375 | 6.32e-12 | 62.8 |
MsG0580025346.01.T01 | MTR_5g092790 | 50.000 | 46 | 23 | 0 | 70 | 115 | 182 | 227 | 7.99e-12 | 61.6 |
MsG0580025346.01.T01 | MTR_6g055030 | 58.140 | 43 | 18 | 0 | 75 | 117 | 97 | 139 | 8.89e-12 | 61.6 |
MsG0580025346.01.T01 | MTR_5g041310 | 49.020 | 51 | 25 | 1 | 65 | 115 | 107 | 156 | 1.25e-11 | 60.8 |
MsG0580025346.01.T01 | MTR_5g009210 | 40.000 | 55 | 33 | 0 | 61 | 115 | 303 | 357 | 1.38e-11 | 61.6 |
MsG0580025346.01.T01 | MTR_5g041330 | 49.020 | 51 | 25 | 1 | 65 | 115 | 97 | 146 | 1.39e-11 | 60.5 |
MsG0580025346.01.T01 | MTR_3g078520 | 37.662 | 77 | 42 | 2 | 42 | 117 | 76 | 147 | 1.45e-11 | 59.7 |
MsG0580025346.01.T01 | MTR_3g078120 | 55.814 | 43 | 19 | 0 | 73 | 115 | 85 | 127 | 1.54e-11 | 59.3 |
MsG0580025346.01.T01 | MTR_1g066430 | 37.879 | 66 | 41 | 0 | 55 | 120 | 633 | 698 | 3.08e-11 | 60.8 |
MsG0580025346.01.T01 | MTR_5g009190 | 41.176 | 51 | 30 | 0 | 65 | 115 | 286 | 336 | 3.10e-11 | 60.5 |
MsG0580025346.01.T01 | MTR_8g066740 | 38.571 | 70 | 42 | 1 | 46 | 115 | 80 | 148 | 3.45e-11 | 60.5 |
MsG0580025346.01.T01 | MTR_7g117350 | 43.103 | 58 | 32 | 1 | 67 | 124 | 317 | 373 | 3.47e-11 | 60.5 |
MsG0580025346.01.T01 | MTR_7g117350 | 34.884 | 86 | 53 | 2 | 39 | 124 | 283 | 365 | 3.49e-11 | 60.5 |
MsG0580025346.01.T01 | MTR_1g066400 | 48.000 | 50 | 26 | 0 | 69 | 118 | 479 | 528 | 3.69e-11 | 60.5 |
MsG0580025346.01.T01 | MTR_6g007670 | 48.214 | 56 | 27 | 1 | 63 | 116 | 21 | 76 | 4.62e-11 | 59.7 |
MsG0580025346.01.T01 | MTR_5g076990 | 30.469 | 128 | 73 | 4 | 5 | 122 | 34 | 155 | 4.78e-11 | 59.7 |
MsG0580025346.01.T01 | MTR_4g102870 | 41.818 | 55 | 31 | 1 | 69 | 123 | 312 | 365 | 5.35e-11 | 60.1 |
MsG0580025346.01.T01 | MTR_3g083480 | 56.250 | 48 | 20 | 1 | 69 | 116 | 233 | 279 | 5.52e-11 | 59.7 |
MsG0580025346.01.T01 | MTR_6g007680 | 50.000 | 44 | 22 | 0 | 73 | 116 | 66 | 109 | 6.43e-11 | 57.8 |
MsG0580025346.01.T01 | MTR_1g011380 | 38.983 | 59 | 35 | 1 | 61 | 119 | 329 | 386 | 7.08e-11 | 59.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580025346.01.T02 | AT4G10160 | 56.757 | 37 | 16 | 0 | 1 | 37 | 113 | 149 | 1.16e-11 | 57.8 |
MsG0580025346.01.T02 | AT4G15975 | 68.750 | 32 | 10 | 0 | 1 | 32 | 92 | 123 | 2.18e-11 | 57.0 |
MsG0580025346.01.T02 | AT1G72310 | 49.091 | 55 | 23 | 1 | 1 | 50 | 143 | 197 | 2.27e-11 | 57.4 |
MsG0580025346.01.T02 | AT4G10150 | 54.054 | 37 | 17 | 0 | 1 | 37 | 127 | 163 | 3.35e-11 | 56.6 |
MsG0580025346.01.T01 | AT1G04360 | 34.091 | 132 | 71 | 4 | 1 | 119 | 52 | 180 | 2.40e-19 | 83.6 |
MsG0580025346.01.T01 | AT5G17600 | 32.886 | 149 | 85 | 4 | 1 | 137 | 65 | 210 | 3.97e-19 | 82.8 |
MsG0580025346.01.T01 | AT4G10160 | 51.724 | 58 | 28 | 0 | 70 | 127 | 94 | 151 | 1.54e-18 | 79.3 |
MsG0580025346.01.T01 | AT4G10150 | 50.877 | 57 | 28 | 0 | 69 | 125 | 107 | 163 | 2.03e-18 | 79.3 |
MsG0580025346.01.T01 | AT1G35330 | 34.109 | 129 | 72 | 3 | 5 | 123 | 54 | 179 | 3.27e-18 | 80.1 |
MsG0580025346.01.T01 | AT3G03550 | 48.684 | 76 | 37 | 1 | 49 | 124 | 137 | 210 | 3.75e-18 | 80.1 |
MsG0580025346.01.T01 | AT3G10910 | 53.226 | 62 | 26 | 1 | 64 | 122 | 105 | 166 | 9.20e-18 | 76.3 |
MsG0580025346.01.T01 | AT4G17905 | 33.333 | 126 | 69 | 1 | 6 | 116 | 73 | 198 | 1.15e-17 | 78.2 |
MsG0580025346.01.T01 | AT4G17905 | 33.333 | 126 | 69 | 1 | 6 | 116 | 99 | 224 | 1.21e-17 | 78.6 |
MsG0580025346.01.T01 | AT5G05280 | 41.237 | 97 | 49 | 2 | 23 | 117 | 67 | 157 | 1.29e-17 | 75.9 |
MsG0580025346.01.T01 | AT1G20823 | 41.304 | 92 | 44 | 2 | 25 | 115 | 71 | 153 | 1.79e-17 | 75.9 |
MsG0580025346.01.T01 | AT4G33565 | 50.746 | 67 | 31 | 1 | 50 | 116 | 196 | 260 | 4.90e-17 | 77.0 |
MsG0580025346.01.T01 | AT3G16720 | 54.545 | 55 | 25 | 0 | 73 | 127 | 119 | 173 | 5.28e-17 | 76.6 |
MsG0580025346.01.T01 | AT2G17450 | 59.615 | 52 | 21 | 0 | 64 | 115 | 93 | 144 | 7.68e-17 | 73.9 |
MsG0580025346.01.T01 | AT4G15975 | 60.417 | 48 | 19 | 0 | 73 | 120 | 76 | 123 | 1.23e-16 | 74.3 |
MsG0580025346.01.T01 | AT5G10380 | 53.571 | 56 | 24 | 1 | 61 | 116 | 125 | 178 | 1.66e-16 | 75.1 |
MsG0580025346.01.T01 | AT5G43420 | 30.714 | 140 | 76 | 4 | 1 | 119 | 45 | 184 | 1.69e-16 | 75.5 |
MsG0580025346.01.T01 | AT5G01880 | 42.857 | 84 | 39 | 1 | 43 | 117 | 66 | 149 | 1.72e-16 | 72.4 |
MsG0580025346.01.T01 | AT2G35000 | 33.846 | 130 | 63 | 4 | 3 | 116 | 56 | 178 | 2.75e-16 | 75.1 |
MsG0580025346.01.T01 | AT1G76410 | 58.491 | 53 | 22 | 0 | 63 | 115 | 94 | 146 | 2.93e-16 | 72.4 |
MsG0580025346.01.T01 | AT1G72310 | 42.169 | 83 | 41 | 2 | 61 | 138 | 117 | 197 | 4.42e-16 | 73.9 |
MsG0580025346.01.T01 | AT3G61550 | 43.011 | 93 | 43 | 3 | 46 | 130 | 103 | 193 | 4.75e-16 | 72.4 |
MsG0580025346.01.T01 | AT3G18930 | 53.333 | 60 | 28 | 0 | 73 | 132 | 156 | 215 | 5.35e-16 | 74.3 |
MsG0580025346.01.T01 | AT3G18930 | 53.333 | 60 | 28 | 0 | 73 | 132 | 156 | 215 | 5.35e-16 | 74.3 |
MsG0580025346.01.T01 | AT3G18930 | 53.333 | 60 | 28 | 0 | 73 | 132 | 156 | 215 | 5.35e-16 | 74.3 |
MsG0580025346.01.T01 | AT1G72220 | 61.702 | 47 | 18 | 0 | 73 | 119 | 177 | 223 | 5.38e-16 | 74.3 |
MsG0580025346.01.T01 | AT2G46160 | 39.773 | 88 | 50 | 1 | 46 | 130 | 108 | 195 | 5.40e-16 | 72.4 |
MsG0580025346.01.T01 | AT2G46160 | 39.773 | 88 | 50 | 1 | 46 | 130 | 108 | 195 | 5.40e-16 | 72.4 |
MsG0580025346.01.T01 | AT4G35480 | 55.172 | 58 | 25 | 1 | 64 | 120 | 103 | 160 | 5.58e-16 | 72.0 |
MsG0580025346.01.T01 | AT4G24015 | 54.717 | 53 | 24 | 0 | 69 | 121 | 101 | 153 | 6.17e-16 | 71.2 |
MsG0580025346.01.T01 | AT2G27940 | 34.286 | 105 | 48 | 3 | 23 | 116 | 89 | 183 | 8.16e-16 | 72.4 |
MsG0580025346.01.T01 | AT1G53820 | 43.210 | 81 | 40 | 3 | 67 | 144 | 113 | 190 | 9.33e-16 | 73.2 |
MsG0580025346.01.T01 | AT1G33480 | 43.548 | 62 | 35 | 0 | 70 | 131 | 97 | 158 | 1.04e-15 | 72.4 |
MsG0580025346.01.T01 | AT2G47560 | 41.975 | 81 | 44 | 1 | 40 | 120 | 78 | 155 | 1.21e-15 | 71.6 |
MsG0580025346.01.T01 | AT2G34990 | 32.593 | 135 | 79 | 4 | 5 | 130 | 22 | 153 | 1.32e-15 | 72.8 |
MsG0580025346.01.T01 | AT2G34990 | 32.593 | 135 | 79 | 4 | 5 | 130 | 44 | 175 | 1.50e-15 | 72.8 |
MsG0580025346.01.T01 | AT4G35840 | 42.667 | 75 | 41 | 1 | 41 | 115 | 161 | 233 | 1.64e-15 | 71.6 |
MsG0580025346.01.T01 | AT1G23980 | 30.159 | 126 | 74 | 2 | 5 | 117 | 64 | 188 | 2.00e-15 | 72.8 |
MsG0580025346.01.T01 | AT1G28040 | 37.615 | 109 | 54 | 3 | 18 | 119 | 198 | 299 | 2.18e-15 | 72.0 |
MsG0580025346.01.T01 | AT4G09120 | 43.590 | 78 | 40 | 2 | 47 | 123 | 99 | 173 | 2.27e-15 | 72.4 |
MsG0580025346.01.T01 | AT1G72200 | 54.902 | 51 | 23 | 0 | 73 | 123 | 144 | 194 | 2.61e-15 | 72.4 |
MsG0580025346.01.T01 | AT3G62690 | 40.909 | 88 | 46 | 2 | 46 | 132 | 91 | 173 | 2.62e-15 | 71.2 |
MsG0580025346.01.T01 | AT1G49220 | 56.250 | 48 | 21 | 0 | 68 | 115 | 130 | 177 | 8.16e-15 | 69.7 |
MsG0580025346.01.T01 | AT3G05200 | 36.893 | 103 | 61 | 3 | 46 | 148 | 103 | 201 | 9.49e-15 | 70.9 |
MsG0580025346.01.T01 | AT2G34000 | 31.452 | 124 | 74 | 3 | 3 | 120 | 20 | 138 | 1.02e-14 | 67.8 |
MsG0580025346.01.T01 | AT1G22500 | 39.583 | 96 | 44 | 3 | 32 | 123 | 83 | 168 | 1.05e-14 | 70.5 |
MsG0580025346.01.T01 | AT5G07040 | 47.368 | 57 | 30 | 0 | 65 | 121 | 86 | 142 | 1.08e-14 | 67.8 |
MsG0580025346.01.T01 | AT4G09100 | 34.000 | 100 | 55 | 3 | 21 | 120 | 44 | 132 | 1.32e-14 | 67.0 |
MsG0580025346.01.T01 | AT5G05810 | 43.421 | 76 | 36 | 2 | 46 | 120 | 124 | 193 | 1.53e-14 | 70.1 |
MsG0580025346.01.T01 | AT5G53110 | 50.943 | 53 | 26 | 0 | 65 | 117 | 322 | 374 | 1.59e-14 | 70.1 |
MsG0580025346.01.T01 | AT3G18773 | 30.909 | 110 | 70 | 3 | 8 | 115 | 67 | 172 | 1.83e-14 | 68.6 |
MsG0580025346.01.T01 | AT4G09110 | 39.286 | 84 | 49 | 2 | 68 | 150 | 117 | 199 | 1.99e-14 | 69.3 |
MsG0580025346.01.T01 | AT2G46495 | 38.384 | 99 | 51 | 3 | 29 | 126 | 282 | 371 | 2.21e-14 | 69.7 |
MsG0580025346.01.T01 | AT2G46495 | 38.384 | 99 | 51 | 3 | 29 | 126 | 254 | 343 | 2.65e-14 | 69.3 |
MsG0580025346.01.T01 | AT2G35910 | 50.000 | 50 | 25 | 0 | 73 | 122 | 147 | 196 | 2.84e-14 | 67.8 |
MsG0580025346.01.T01 | AT2G42350 | 55.102 | 49 | 22 | 0 | 73 | 121 | 100 | 148 | 3.06e-14 | 67.8 |
MsG0580025346.01.T01 | AT5G47610 | 50.000 | 50 | 25 | 0 | 68 | 117 | 102 | 151 | 3.92e-14 | 66.6 |
MsG0580025346.01.T01 | AT2G25410 | 36.559 | 93 | 51 | 2 | 29 | 120 | 289 | 374 | 3.96e-14 | 68.9 |
MsG0580025346.01.T01 | AT4G09130 | 42.353 | 85 | 41 | 2 | 64 | 140 | 110 | 194 | 4.14e-14 | 68.9 |
MsG0580025346.01.T01 | AT5G66070 | 34.579 | 107 | 59 | 3 | 13 | 115 | 143 | 242 | 4.28e-14 | 67.8 |
MsG0580025346.01.T01 | AT2G20030 | 55.814 | 43 | 19 | 0 | 73 | 115 | 124 | 166 | 5.92e-14 | 68.6 |
MsG0580025346.01.T01 | AT2G44578 | 36.082 | 97 | 59 | 2 | 53 | 148 | 49 | 143 | 7.05e-14 | 65.5 |
MsG0580025346.01.T01 | AT5G06490 | 45.283 | 53 | 29 | 0 | 73 | 125 | 129 | 181 | 8.39e-14 | 66.2 |
MsG0580025346.01.T01 | AT5G66070 | 31.068 | 103 | 52 | 1 | 32 | 115 | 116 | 218 | 8.53e-14 | 66.6 |
MsG0580025346.01.T01 | AT5G66070 | 31.068 | 103 | 52 | 1 | 32 | 115 | 116 | 218 | 8.53e-14 | 66.6 |
MsG0580025346.01.T01 | AT5G42200 | 36.364 | 99 | 57 | 2 | 33 | 130 | 69 | 162 | 1.22e-13 | 65.1 |
MsG0580025346.01.T01 | AT4G30400 | 60.465 | 43 | 17 | 0 | 73 | 115 | 134 | 176 | 1.24e-13 | 67.8 |
MsG0580025346.01.T01 | AT2G18650 | 57.778 | 45 | 19 | 0 | 73 | 117 | 126 | 170 | 1.27e-13 | 67.8 |
MsG0580025346.01.T01 | AT3G60220 | 39.474 | 76 | 44 | 1 | 41 | 116 | 87 | 160 | 1.46e-13 | 67.0 |
MsG0580025346.01.T01 | AT1G49230 | 56.250 | 48 | 21 | 0 | 68 | 115 | 126 | 173 | 1.61e-13 | 65.9 |
MsG0580025346.01.T01 | AT5G40250 | 55.556 | 45 | 20 | 0 | 73 | 117 | 143 | 187 | 1.71e-13 | 67.0 |
MsG0580025346.01.T01 | AT5G27420 | 28.758 | 153 | 99 | 6 | 3 | 153 | 54 | 198 | 1.90e-13 | 67.0 |
MsG0580025346.01.T01 | AT4G28890 | 55.814 | 43 | 19 | 0 | 73 | 115 | 123 | 165 | 2.12e-13 | 67.0 |
MsG0580025346.01.T01 | AT3G60966 | 44.776 | 67 | 33 | 1 | 56 | 122 | 49 | 111 | 2.14e-13 | 63.9 |
MsG0580025346.01.T01 | AT4G40070 | 48.980 | 49 | 25 | 0 | 69 | 117 | 120 | 168 | 2.15e-13 | 66.6 |
MsG0580025346.01.T01 | AT1G49200 | 52.083 | 48 | 23 | 0 | 68 | 115 | 131 | 178 | 2.21e-13 | 65.5 |
MsG0580025346.01.T01 | AT2G17730 | 46.154 | 65 | 33 | 1 | 51 | 115 | 176 | 238 | 2.27e-13 | 65.9 |
MsG0580025346.01.T01 | AT1G49210 | 56.250 | 48 | 19 | 1 | 68 | 115 | 132 | 177 | 2.42e-13 | 65.5 |
MsG0580025346.01.T01 | AT5G57750 | 58.140 | 43 | 18 | 0 | 73 | 115 | 122 | 164 | 2.42e-13 | 65.1 |
MsG0580025346.01.T01 | AT3G48030 | 53.061 | 49 | 23 | 0 | 73 | 121 | 207 | 255 | 2.59e-13 | 66.6 |
MsG0580025346.01.T01 | AT3G48030 | 53.061 | 49 | 23 | 0 | 73 | 121 | 129 | 177 | 2.92e-13 | 65.9 |
MsG0580025346.01.T01 | AT2G37580 | 39.286 | 84 | 43 | 2 | 36 | 119 | 113 | 188 | 3.53e-13 | 65.1 |
MsG0580025346.01.T01 | AT2G46493 | 40.580 | 69 | 41 | 0 | 51 | 119 | 116 | 184 | 4.02e-13 | 64.3 |
MsG0580025346.01.T01 | AT3G14320 | 38.028 | 71 | 41 | 1 | 73 | 143 | 88 | 155 | 5.85e-13 | 63.9 |
MsG0580025346.01.T01 | AT5G58580 | 40.580 | 69 | 41 | 0 | 73 | 141 | 138 | 206 | 6.50e-13 | 65.1 |
MsG0580025346.01.T01 | AT3G11110 | 53.488 | 43 | 20 | 0 | 75 | 117 | 109 | 151 | 8.92e-13 | 62.8 |
MsG0580025346.01.T01 | AT4G17245 | 48.214 | 56 | 28 | 1 | 68 | 122 | 97 | 152 | 1.17e-12 | 62.8 |
MsG0580025346.01.T01 | AT5G36001 | 40.580 | 69 | 41 | 0 | 59 | 127 | 250 | 318 | 1.25e-12 | 64.3 |
MsG0580025346.01.T01 | AT4G17920 | 38.462 | 91 | 49 | 3 | 26 | 115 | 68 | 152 | 1.39e-12 | 64.3 |
MsG0580025346.01.T01 | AT2G42360 | 44.643 | 56 | 31 | 0 | 73 | 128 | 108 | 163 | 1.70e-12 | 63.2 |
MsG0580025346.01.T01 | AT2G44581 | 39.726 | 73 | 44 | 0 | 53 | 125 | 50 | 122 | 1.98e-12 | 61.6 |
MsG0580025346.01.T01 | AT1G74410 | 53.488 | 43 | 20 | 0 | 73 | 115 | 176 | 218 | 2.07e-12 | 62.8 |
MsG0580025346.01.T01 | AT2G46494 | 49.091 | 55 | 27 | 1 | 66 | 119 | 308 | 362 | 2.23e-12 | 63.9 |
MsG0580025346.01.T01 | AT1G32361 | 31.250 | 96 | 59 | 1 | 20 | 115 | 108 | 196 | 3.36e-12 | 63.2 |
MsG0580025346.01.T01 | AT4G26400 | 46.429 | 56 | 29 | 1 | 73 | 128 | 241 | 295 | 3.44e-12 | 63.5 |
MsG0580025346.01.T01 | AT4G26400 | 46.429 | 56 | 29 | 1 | 73 | 128 | 241 | 295 | 3.44e-12 | 63.5 |
MsG0580025346.01.T01 | AT3G47990 | 40.741 | 81 | 45 | 3 | 59 | 138 | 206 | 284 | 3.65e-12 | 63.2 |
MsG0580025346.01.T01 | AT3G47990 | 40.741 | 81 | 45 | 3 | 59 | 138 | 222 | 300 | 4.24e-12 | 63.2 |
MsG0580025346.01.T01 | AT3G47990 | 40.741 | 81 | 45 | 3 | 59 | 138 | 165 | 243 | 5.20e-12 | 62.8 |
MsG0580025346.01.T01 | AT3G47990 | 40.741 | 81 | 45 | 3 | 59 | 138 | 165 | 243 | 5.20e-12 | 62.8 |
MsG0580025346.01.T01 | AT3G47990 | 40.741 | 81 | 45 | 3 | 59 | 138 | 165 | 243 | 5.20e-12 | 62.8 |
MsG0580025346.01.T01 | AT5G56340 | 44.872 | 78 | 39 | 2 | 73 | 147 | 259 | 335 | 5.31e-12 | 62.8 |
MsG0580025346.01.T01 | AT3G20395 | 52.273 | 44 | 21 | 0 | 72 | 115 | 170 | 213 | 6.35e-12 | 61.6 |
MsG0580025346.01.T01 | AT3G43430 | 30.303 | 99 | 60 | 1 | 59 | 148 | 69 | 167 | 1.00e-11 | 60.1 |
MsG0580025346.01.T01 | AT4G32600 | 33.333 | 93 | 39 | 3 | 49 | 119 | 317 | 408 | 1.60e-11 | 61.6 |
MsG0580025346.01.T01 | AT4G32600 | 33.333 | 93 | 39 | 3 | 49 | 119 | 317 | 408 | 1.60e-11 | 61.6 |
MsG0580025346.01.T01 | AT1G63840 | 32.673 | 101 | 53 | 5 | 24 | 120 | 49 | 138 | 1.71e-11 | 59.3 |
MsG0580025346.01.T01 | AT4G11680 | 53.191 | 47 | 21 | 1 | 69 | 115 | 334 | 379 | 1.81e-11 | 61.2 |
MsG0580025346.01.T01 | AT3G55530 | 34.091 | 88 | 51 | 2 | 31 | 118 | 175 | 255 | 2.13e-11 | 60.8 |
MsG0580025346.01.T01 | AT5G41440 | 39.655 | 58 | 35 | 0 | 61 | 118 | 66 | 123 | 3.04e-11 | 57.8 |
MsG0580025346.01.T01 | AT1G12760 | 42.105 | 57 | 32 | 1 | 69 | 125 | 278 | 333 | 3.65e-11 | 60.5 |
MsG0580025346.01.T01 | AT1G12760 | 42.105 | 57 | 32 | 1 | 69 | 125 | 349 | 404 | 3.76e-11 | 60.5 |
MsG0580025346.01.T01 | AT3G61460 | 34.043 | 94 | 54 | 4 | 30 | 121 | 56 | 143 | 4.21e-11 | 58.5 |
MsG0580025346.01.T01 | AT5G20885 | 38.095 | 84 | 34 | 2 | 59 | 127 | 68 | 148 | 4.40e-11 | 58.5 |
MsG0580025346.01.T01 | AT4G11370 | 36.145 | 83 | 44 | 3 | 42 | 121 | 60 | 136 | 4.53e-11 | 58.2 |
MsG0580025346.01.T01 | AT1G80400 | 25.773 | 97 | 52 | 2 | 49 | 126 | 312 | 407 | 6.51e-11 | 59.7 |
MsG0580025346.01.T01 | AT5G46650 | 36.735 | 98 | 55 | 3 | 29 | 125 | 76 | 167 | 6.67e-11 | 59.3 |
Find 52 sgRNAs with CRISPR-Local
Find 57 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATCATCTTTATTTCTCTTA+TGG | 0.248139 | 5:-17259324 | None:intergenic |
GGTACTTGTGTGTTGGAATT+AGG | 0.279210 | 5:-17259303 | None:intergenic |
GGCCGCACTGGCACGACATA+TGG | 0.307932 | 5:-17259491 | None:intergenic |
CGGCACGTGTGCCGTGTGTT+TGG | 0.315099 | 5:+17259366 | MsG0580025346.01.T01:CDS |
ACCCCTTCACCGGCGGTGAA+TGG | 0.335383 | 5:+17259535 | MsG0580025346.01.T01:CDS |
CCCCTTCACCGGCGGTGAAT+GGG | 0.363940 | 5:+17259536 | MsG0580025346.01.T01:CDS |
GTGGCATTCACCGCCGGTGA+AGG | 0.367809 | 5:-17259514 | None:intergenic |
AAATAAAGATGATGCTGTTC+CGG | 0.378765 | 5:+17259333 | MsG0580025346.01.T01:CDS |
GTGGGTTGGTGGTACGTTGT+TGG | 0.381894 | 5:-17259216 | None:intergenic |
TGCCCATTCACCGCCGGTGA+AGG | 0.382116 | 5:-17259538 | None:intergenic |
CTCTTATGGTACTTGTGTGT+TGG | 0.382483 | 5:-17259310 | None:intergenic |
TGGCATTCACCGCCGGTGAA+GGG | 0.397115 | 5:-17259513 | None:intergenic |
GCCCATTCACCGCCGGTGAA+GGG | 0.404543 | 5:-17259537 | None:intergenic |
GCCGCACTGGCACGACATAT+GGG | 0.415590 | 5:-17259490 | None:intergenic |
TCTTCGAGGCTCGGTGTCAC+TGG | 0.417000 | 5:-17259256 | None:intergenic |
GGCACGTGTGCCGTGTGTTT+GGG | 0.419077 | 5:+17259367 | MsG0580025346.01.T01:CDS |
CGGTGGCTGTGGTGGGTTGG+TGG | 0.421011 | 5:-17259227 | None:intergenic |
CGCCGGTGAAGGGGCCGCAC+TGG | 0.421886 | 5:-17259503 | None:intergenic |
TGCCAGTGCGGCCCCTTCAC+CGG | 0.434788 | 5:+17259501 | MsG0580025346.01.T01:CDS |
AGATATGAGTCATACCAATA+TGG | 0.440702 | 5:+17259573 | MsG0580025346.01.T01:CDS |
GGTTGCCGCGGTGGCTGTGG+TGG | 0.441991 | 5:-17259235 | None:intergenic |
CACGTGCCGTCTTCGCCATC+CGG | 0.450170 | 5:-17259352 | None:intergenic |
CCGCGGTGGCTGTGGTGGGT+TGG | 0.453586 | 5:-17259230 | None:intergenic |
GATAGCAAGTGGAACCATAT+TGG | 0.454042 | 5:-17259587 | None:intergenic |
GGCATTCACCGCCGGTGAAG+GGG | 0.480492 | 5:-17259512 | None:intergenic |
ACTGGTTGCCGCGGTGGCTG+TGG | 0.489023 | 5:-17259238 | None:intergenic |
CCCATTCACCGCCGGTGAAG+GGG | 0.494286 | 5:-17259536 | None:intergenic |
GGTGAATGCCACCCCTTCAC+CGG | 0.501178 | 5:+17259525 | MsG0580025346.01.T01:CDS |
GTTGCCGCGGTGGCTGTGGT+GGG | 0.519607 | 5:-17259234 | None:intergenic |
GAAGGGGTGGCATTCACCGC+CGG | 0.523458 | 5:-17259520 | None:intergenic |
GCTGTTCCGGATGGCGAAGA+CGG | 0.525015 | 5:+17259346 | MsG0580025346.01.T01:CDS |
TGCTGCTGCCCATTCACCGC+CGG | 0.525173 | 5:-17259544 | None:intergenic |
AACAAATAATGCTGAACCCA+TGG | 0.532597 | 5:-17259155 | None:intergenic |
CCGCACTGGCACGACATATG+GGG | 0.537356 | 5:-17259489 | None:intergenic |
TGCTATCATGCAAAGTGGAT+TGG | 0.542443 | 5:+17259603 | MsG0580025346.01.T01:CDS |
ATGTTTCATGTATTGACATG+TGG | 0.552514 | 5:+17259446 | MsG0580025346.01.T01:CDS |
CTCAAAATCTCCCAAACACA+CGG | 0.563228 | 5:-17259377 | None:intergenic |
ATTCACCGCCGGTGAAGGGG+TGG | 0.564983 | 5:-17259533 | None:intergenic |
TGGGGCAACTCGAATGCGAA+TGG | 0.564989 | 5:-17259471 | None:intergenic |
CCAACCCACCACAGCCACCG+CGG | 0.566585 | 5:+17259230 | MsG0580025346.01.T01:CDS |
GGTGTCACTGGTTGCCGCGG+TGG | 0.568402 | 5:-17259244 | None:intergenic |
CTCGGTGTCACTGGTTGCCG+CGG | 0.576025 | 5:-17259247 | None:intergenic |
CCACTTTGCATGATAGCAAG+TGG | 0.577422 | 5:-17259598 | None:intergenic |
AATTAGGTTTGCTACTGATG+TGG | 0.580223 | 5:-17259287 | None:intergenic |
TGCAAAGTGGATTGGTGAGA+TGG | 0.581284 | 5:+17259611 | MsG0580025346.01.T01:CDS |
AAAGATGATGCTGTTCCGGA+TGG | 0.595173 | 5:+17259337 | MsG0580025346.01.T01:CDS |
TTGAGGAGGGTGAAGAGCTG+AGG | 0.599022 | 5:+17259395 | MsG0580025346.01.T01:CDS |
CCACTTGCTATCATGCAAAG+TGG | 0.603016 | 5:+17259598 | MsG0580025346.01.T01:CDS |
TGAAAAGAGTGTAAGCACTC+AGG | 0.605719 | 5:-17259424 | None:intergenic |
GAATGCCACCCCTTCACCGG+CGG | 0.610721 | 5:+17259528 | MsG0580025346.01.T01:CDS |
CAGTGCGGCCCCTTCACCGG+CGG | 0.612966 | 5:+17259504 | MsG0580025346.01.T01:CDS |
CCCCATATGTCGTGCCAGTG+CGG | 0.624828 | 5:+17259489 | MsG0580025346.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | CATCATCTTTATTTCTCTTA+TGG | - | Chr5:17259327-17259346 | None:intergenic | 25.0% |
!! | TTGTTGGTTACAAAAACAAA+TGG | - | Chr5:17259203-17259222 | None:intergenic | 25.0% |
AAATAAAGATGATGCTGTTC+CGG | + | Chr5:17259333-17259352 | MsG0580025346.01.T01:CDS | 30.0% | |
AGATATGAGTCATACCAATA+TGG | + | Chr5:17259573-17259592 | MsG0580025346.01.T01:CDS | 30.0% | |
! | ATGTTTCATGTATTGACATG+TGG | + | Chr5:17259446-17259465 | MsG0580025346.01.T01:CDS | 30.0% |
!! | AATTAGGTTTGCTACTGATG+TGG | - | Chr5:17259290-17259309 | None:intergenic | 35.0% |
CTCAAAATCTCCCAAACACA+CGG | - | Chr5:17259380-17259399 | None:intergenic | 40.0% | |
CTCTTATGGTACTTGTGTGT+TGG | - | Chr5:17259313-17259332 | None:intergenic | 40.0% | |
GATAGCAAGTGGAACCATAT+TGG | - | Chr5:17259590-17259609 | None:intergenic | 40.0% | |
GGTACTTGTGTGTTGGAATT+AGG | - | Chr5:17259306-17259325 | None:intergenic | 40.0% | |
TGCTATCATGCAAAGTGGAT+TGG | + | Chr5:17259603-17259622 | MsG0580025346.01.T01:CDS | 40.0% | |
! | ATGTGGATGTGTTTTCTTCG+AGG | - | Chr5:17259273-17259292 | None:intergenic | 40.0% |
! | TGAAAAGAGTGTAAGCACTC+AGG | - | Chr5:17259427-17259446 | None:intergenic | 40.0% |
!! | TGTTTGGGAGATTTTGAGGA+GGG | + | Chr5:17259382-17259401 | MsG0580025346.01.T01:CDS | 40.0% |
AAAGATGATGCTGTTCCGGA+TGG | + | Chr5:17259337-17259356 | MsG0580025346.01.T01:CDS | 45.0% | |
CCACTTTGCATGATAGCAAG+TGG | - | Chr5:17259601-17259620 | None:intergenic | 45.0% | |
! | CGTGTGTTTGGGAGATTTTG+AGG | + | Chr5:17259378-17259397 | MsG0580025346.01.T01:CDS | 45.0% |
! | GATGTGTTTTCTTCGAGGCT+CGG | - | Chr5:17259268-17259287 | None:intergenic | 45.0% |
!! | CCACTTGCTATCATGCAAAG+TGG | + | Chr5:17259598-17259617 | MsG0580025346.01.T01:CDS | 45.0% |
!! | GTGTTTGGGAGATTTTGAGG+AGG | + | Chr5:17259381-17259400 | MsG0580025346.01.T01:CDS | 45.0% |
!! | TGCAAAGTGGATTGGTGAGA+TGG | + | Chr5:17259611-17259630 | MsG0580025346.01.T01:CDS | 45.0% |
TGGGGCAACTCGAATGCGAA+TGG | - | Chr5:17259474-17259493 | None:intergenic | 55.0% | |
TTGAGGAGGGTGAAGAGCTG+AGG | + | Chr5:17259395-17259414 | MsG0580025346.01.T01:CDS | 55.0% | |
!! | GTGGGTTGGTGGTACGTTGT+TGG | - | Chr5:17259219-17259238 | None:intergenic | 55.0% |
CCCCATATGTCGTGCCAGTG+CGG | + | Chr5:17259489-17259508 | MsG0580025346.01.T01:CDS | 60.0% | |
GCTGTTCCGGATGGCGAAGA+CGG | + | Chr5:17259346-17259365 | MsG0580025346.01.T01:CDS | 60.0% | |
GGCACGTGTGCCGTGTGTTT+GGG | + | Chr5:17259367-17259386 | MsG0580025346.01.T01:CDS | 60.0% | |
GGTGAATGCCACCCCTTCAC+CGG | + | Chr5:17259525-17259544 | MsG0580025346.01.T01:CDS | 60.0% | |
TGGCATTCACCGCCGGTGAA+GGG | - | Chr5:17259516-17259535 | None:intergenic | 60.0% | |
! | CCGCACTGGCACGACATATG+GGG | - | Chr5:17259492-17259511 | None:intergenic | 60.0% |
! | GCCGCACTGGCACGACATAT+GGG | - | Chr5:17259493-17259512 | None:intergenic | 60.0% |
!! | TCTTCGAGGCTCGGTGTCAC+TGG | - | Chr5:17259259-17259278 | None:intergenic | 60.0% |
ACCCCTTCACCGGCGGTGAA+TGG | + | Chr5:17259535-17259554 | MsG0580025346.01.T01:CDS | 65.0% | |
ATTCACCGCCGGTGAAGGGG+TGG | - | Chr5:17259512-17259531 | None:intergenic | 65.0% | |
CACGTGCCGTCTTCGCCATC+CGG | - | Chr5:17259355-17259374 | None:intergenic | 65.0% | |
CCCATTCACCGCCGGTGAAG+GGG | - | Chr5:17259539-17259558 | None:intergenic | 65.0% | |
CCCCTTCACCGGCGGTGAAT+GGG | + | Chr5:17259512-17259531 | MsG0580025346.01.T01:CDS | 65.0% | |
CGGCACGTGTGCCGTGTGTT+TGG | + | Chr5:17259366-17259385 | MsG0580025346.01.T01:CDS | 65.0% | |
GAAGGGGTGGCATTCACCGC+CGG | - | Chr5:17259523-17259542 | None:intergenic | 65.0% | |
GAATGCCACCCCTTCACCGG+CGG | + | Chr5:17259528-17259547 | MsG0580025346.01.T01:CDS | 65.0% | |
GCCCATTCACCGCCGGTGAA+GGG | - | Chr5:17259540-17259559 | None:intergenic | 65.0% | |
GGCATTCACCGCCGGTGAAG+GGG | - | Chr5:17259515-17259534 | None:intergenic | 65.0% | |
GTGGCATTCACCGCCGGTGA+AGG | - | Chr5:17259517-17259536 | None:intergenic | 65.0% | |
TGCCCATTCACCGCCGGTGA+AGG | - | Chr5:17259541-17259560 | None:intergenic | 65.0% | |
TGCTGCTGCCCATTCACCGC+CGG | - | Chr5:17259547-17259566 | None:intergenic | 65.0% | |
! | GGCCGCACTGGCACGACATA+TGG | - | Chr5:17259494-17259513 | None:intergenic | 65.0% |
!! | CTCGGTGTCACTGGTTGCCG+CGG | - | Chr5:17259250-17259269 | None:intergenic | 65.0% |
ACTGGTTGCCGCGGTGGCTG+TGG | - | Chr5:17259241-17259260 | None:intergenic | 70.0% | |
CCAACCCACCACAGCCACCG+CGG | + | Chr5:17259230-17259249 | MsG0580025346.01.T01:CDS | 70.0% | |
GTTGCCGCGGTGGCTGTGGT+GGG | - | Chr5:17259237-17259256 | None:intergenic | 70.0% | |
TGCCAGTGCGGCCCCTTCAC+CGG | + | Chr5:17259501-17259520 | MsG0580025346.01.T01:CDS | 70.0% | |
!! | CGGTGGCTGTGGTGGGTTGG+TGG | - | Chr5:17259230-17259249 | None:intergenic | 70.0% |
!! | GGTGTCACTGGTTGCCGCGG+TGG | - | Chr5:17259247-17259266 | None:intergenic | 70.0% |
CAGTGCGGCCCCTTCACCGG+CGG | + | Chr5:17259504-17259523 | MsG0580025346.01.T01:CDS | 75.0% | |
GGTTGCCGCGGTGGCTGTGG+TGG | - | Chr5:17259238-17259257 | None:intergenic | 75.0% | |
!! | CCGCGGTGGCTGTGGTGGGT+TGG | - | Chr5:17259233-17259252 | None:intergenic | 75.0% |
! | CGCCGGTGAAGGGGCCGCAC+TGG | - | Chr5:17259506-17259525 | None:intergenic | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr5 | gene | 17259157 | 17259636 | 17259157 | ID=MsG0580025346.01;Name=MsG0580025346.01 |
Chr5 | mRNA | 17259157 | 17259636 | 17259157 | ID=MsG0580025346.01.T01;Parent=MsG0580025346.01;Name=MsG0580025346.01.T01;_AED=0.49;_eAED=0.49;_QI=0|-1|0|1|-1|0|1|0|159 |
Chr5 | exon | 17259157 | 17259636 | 17259157 | ID=MsG0580025346.01.T01:exon:22895;Parent=MsG0580025346.01.T01 |
Chr5 | CDS | 17259157 | 17259636 | 17259157 | ID=MsG0580025346.01.T01:cds;Parent=MsG0580025346.01.T01 |
Chr5 | mRNA | 17259421 | 17259636 | 17259421 | ID=MsG0580025346.01.T02;Parent=MsG0580025346.01;Name=MsG0580025346.01.T02;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|0|1|0|71 |
Chr5 | exon | 17259421 | 17259636 | 17259421 | ID=MsG0580025346.01.T02:exon:22896;Parent=MsG0580025346.01.T02 |
Chr5 | CDS | 17259421 | 17259636 | 17259421 | ID=MsG0580025346.01.T02:cds;Parent=MsG0580025346.01.T02 |
Gene Sequence |
Protein sequence |