Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580025429.01.T01 | AES95708.2 | 74.286 | 175 | 44 | 1 | 4 | 178 | 17 | 190 | 1.92E-79 | 258 |
MsG0580025429.01.T01 | AES95708.2 | 74.286 | 70 | 17 | 1 | 313 | 382 | 182 | 250 | 9.26E-24 | 112 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580025429.01.T01 | G7KAY0 | 74.286 | 175 | 44 | 1 | 4 | 178 | 17 | 190 | 9.15e-80 | 258 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0180001504.01 | MsG0580025429.01 | 0.812854 | 3.438767e-51 | 2.210365e-48 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580025429.01.T01 | MTR_5g028510 | 74.286 | 175 | 44 | 1 | 4 | 178 | 17 | 190 | 2.32e-83 | 258 |
MsG0580025429.01.T01 | MTR_5g028510 | 74.286 | 70 | 17 | 1 | 313 | 382 | 182 | 250 | 1.12e-27 | 112 |
MsG0580025429.01.T01 | MTR_5g028930 | 54.070 | 172 | 71 | 2 | 26 | 195 | 2 | 167 | 2.98e-42 | 156 |
MsG0580025429.01.T01 | MTR_5g028930 | 55.000 | 60 | 26 | 1 | 323 | 382 | 155 | 213 | 2.70e-11 | 65.5 |
MsG0580025429.01.T01 | MTR_5g028190 | 65.278 | 72 | 25 | 0 | 105 | 176 | 5 | 76 | 2.52e-21 | 95.9 |
MsG0580025429.01.T01 | MTR_5g028190 | 52.381 | 63 | 29 | 1 | 321 | 382 | 79 | 141 | 3.25e-11 | 65.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 75 sgRNAs with CRISPR-Local
Find 89 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACCGTGCTCTTTCTTATATT+TGG | 0.185389 | 5:+18438741 | None:intergenic |
TTCACGTATCTCCACCTTCT+TGG | 0.210644 | 5:+18438626 | None:intergenic |
CACCTTCTTGGTCTCTATTA+TGG | 0.211188 | 5:+18438638 | None:intergenic |
AAGGGATTCCGTGAAGATTT+AGG | 0.240662 | 5:-18438816 | MsG0580025429.01.T01:CDS |
TACCATGCACTTTGCTATAT+TGG | 0.253608 | 5:+18439082 | None:intergenic |
TGTATCACTGCCGAAATATT+TGG | 0.259595 | 5:-18438447 | MsG0580025429.01.T01:CDS |
TGAATAGTTCCTTATGTTGT+TGG | 0.279987 | 5:+18439324 | None:intergenic |
AGACAACAACGAAGTTTCTT+AGG | 0.290688 | 5:-18438914 | MsG0580025429.01.T01:CDS |
AAACACATTGGAGGGAGTTT+TGG | 0.299305 | 5:+18438512 | None:intergenic |
CAAATAATTCCAGGCGTCTT+TGG | 0.300136 | 5:+18439617 | None:intergenic |
TGCTAGTTGTTCACGGGTTG+TGG | 0.314308 | 5:+18438860 | None:intergenic |
GTTCTTCTGGCTGCTGCTAA+TGG | 0.317046 | 5:-18438564 | MsG0580025429.01.T01:CDS |
GCTCTTGTTGCTCGTTATAC+TGG | 0.317566 | 5:-18439110 | MsG0580025429.01.T01:CDS |
AAATGTAGTACCTGTTCTTC+TGG | 0.322260 | 5:-18438577 | MsG0580025429.01.T01:CDS |
GGCAGGTATGTGGGGTGATG+TGG | 0.348034 | 5:-18439763 | MsG0580025429.01.T01:CDS |
TCCTTTGTTGCCCATGATGA+TGG | 0.373834 | 5:+18439714 | None:intergenic |
GATTAAATATGTACCTTGTT+CGG | 0.384788 | 5:+18439554 | None:intergenic |
AGCTCTTTGCTAGTTGTTCA+CGG | 0.393837 | 5:+18438853 | None:intergenic |
CGATGTCATCAAATAATTCC+AGG | 0.424388 | 5:+18439608 | None:intergenic |
AATGTAAATGACAGCTGTAT+TGG | 0.431353 | 5:-18439360 | MsG0580025429.01.T01:intron |
TTAGCAGCAGCCAGAAGAAC+AGG | 0.431355 | 5:+18438567 | None:intergenic |
AATAAAGAGGATTCGTGAAC+GGG | 0.438011 | 5:-18438772 | MsG0580025429.01.T01:CDS |
GCTAGTTGTTCACGGGTTGT+GGG | 0.441451 | 5:+18438861 | None:intergenic |
TTGTTCACGGGTTGTGGGAA+TGG | 0.447307 | 5:+18438866 | None:intergenic |
GGCTGTTTCCTAAATCTTCA+CGG | 0.456368 | 5:+18438808 | None:intergenic |
ACCTTGTTCGGCATCTGCGC+TGG | 0.464081 | 5:+18439566 | None:intergenic |
GTATGTGGGGTGATGTGGTC+CGG | 0.469238 | 5:-18439758 | MsG0580025429.01.T01:CDS |
GTGGAAAAGTTGGTGAAAGA+AGG | 0.471656 | 5:-18439182 | MsG0580025429.01.T01:CDS |
GTTCCTTATGTTGTTGGCCA+AGG | 0.479824 | 5:+18439330 | None:intergenic |
TAGCCTTGGCCAACAACATA+AGG | 0.480225 | 5:-18439333 | MsG0580025429.01.T01:CDS |
ATATATATACAATCCGCTTC+TGG | 0.480742 | 5:-18439251 | MsG0580025429.01.T01:CDS |
ACTCCCTCCAATGTGTTTGA+CGG | 0.480849 | 5:-18438507 | MsG0580025429.01.T01:CDS |
GCTCTTTGCTAGTTGTTCAC+GGG | 0.488715 | 5:+18438854 | None:intergenic |
TCTTTATTCTCTTTACAGTA+CGG | 0.492090 | 5:+18438787 | None:intergenic |
TCAAAACAGCCAAAGACGCC+TGG | 0.494482 | 5:-18439626 | MsG0580025429.01.T01:CDS |
ATATTTCGGCAGTGATACAT+AGG | 0.497705 | 5:+18438451 | None:intergenic |
AACAACATAAGGAACTATTC+AGG | 0.509279 | 5:-18439322 | MsG0580025429.01.T01:CDS |
GTAAATATGCAAGACAATCA+AGG | 0.518848 | 5:-18439146 | MsG0580025429.01.T01:CDS |
AGAAAAGAAGAATCATGAAC+CGG | 0.521661 | 5:-18438712 | MsG0580025429.01.T01:CDS |
TGGAAAAGTTGGTGAAAGAA+GGG | 0.523503 | 5:-18439181 | MsG0580025429.01.T01:CDS |
TCCATCATCATGGGCAACAA+AGG | 0.531371 | 5:-18439715 | MsG0580025429.01.T01:CDS |
AAGTTGAAACTCCATCATCA+TGG | 0.544074 | 5:-18439725 | MsG0580025429.01.T01:CDS |
GAATAAAGAGGATTCGTGAA+CGG | 0.566023 | 5:-18438773 | MsG0580025429.01.T01:CDS |
ATTGGTTCCGTCAAACACAT+TGG | 0.573385 | 5:+18438500 | None:intergenic |
TGAACTAGAAGCAGAGAACA+TGG | 0.579946 | 5:-18438940 | MsG0580025429.01.T01:CDS |
AAGAAGAGTCCTACCAGAAG+CGG | 0.580276 | 5:+18439238 | None:intergenic |
ACCAAATATAAGAAAGAGCA+CGG | 0.580526 | 5:-18438742 | MsG0580025429.01.T01:CDS |
GCTGTATTGGACGATAGCCT+TGG | 0.589687 | 5:-18439347 | MsG0580025429.01.T01:CDS |
CATATCATTCAACTCTCATG+TGG | 0.590047 | 5:-18439678 | MsG0580025429.01.T01:CDS |
GGTTCCGTCAAACACATTGG+AGG | 0.590762 | 5:+18438503 | None:intergenic |
GCCAGCGCAGATGCCGAACA+AGG | 0.592911 | 5:-18439567 | MsG0580025429.01.T01:intron |
GTCGAGAGAGGTGATTACAT+TGG | 0.593782 | 5:-18439296 | MsG0580025429.01.T01:CDS |
AGTTGAAACTCCATCATCAT+GGG | 0.594569 | 5:-18439724 | MsG0580025429.01.T01:CDS |
CTTCACGTAGCAGTAATCGC+TGG | 0.599411 | 5:-18439218 | MsG0580025429.01.T01:CDS |
GTTCCGTCAAACACATTGGA+GGG | 0.599972 | 5:+18438504 | None:intergenic |
TAAGTGTAAATTGATATGCT+GGG | 0.601643 | 5:-18439786 | None:intergenic |
AAGTGTAAATTGATATGCTG+GGG | 0.605098 | 5:-18439785 | None:intergenic |
TGATGAGGAATCAGAATGCA+TGG | 0.606893 | 5:-18439039 | MsG0580025429.01.T01:CDS |
CACCAATATAGCAAAGTGCA+TGG | 0.611613 | 5:-18439084 | MsG0580025429.01.T01:CDS |
ATATACAATCCGCTTCTGGT+AGG | 0.613106 | 5:-18439247 | MsG0580025429.01.T01:CDS |
TATTTCGGCAGTGATACATA+GGG | 0.619213 | 5:+18438452 | None:intergenic |
AATTATTTGATGACATCGTA+TGG | 0.620413 | 5:-18439603 | MsG0580025429.01.T01:CDS |
CATAATAGAGACCAAGAAGG+TGG | 0.623866 | 5:-18438637 | MsG0580025429.01.T01:CDS |
CTATTCAGGAGGGTCGAGAG+AGG | 0.625844 | 5:-18439308 | MsG0580025429.01.T01:CDS |
AACATAAGGAACTATTCAGG+AGG | 0.630434 | 5:-18439319 | MsG0580025429.01.T01:CDS |
TGAACAACTAGCAAAGAGCT+CGG | 0.636242 | 5:-18438850 | MsG0580025429.01.T01:CDS |
TGAACTAGTAGCAGAGAGCA+TGG | 0.637690 | 5:-18438994 | MsG0580025429.01.T01:CDS |
CATTCTGATTCCTCATCACG+AGG | 0.656309 | 5:+18439044 | None:intergenic |
GTACTGTAAAGAGAATAAAG+AGG | 0.659247 | 5:-18438785 | MsG0580025429.01.T01:CDS |
TACCATAATAGAGACCAAGA+AGG | 0.666758 | 5:-18438640 | MsG0580025429.01.T01:CDS |
GCATGGTAATGACAACAAAG+AGG | 0.672696 | 5:-18439022 | MsG0580025429.01.T01:CDS |
ACATAAGGAACTATTCAGGA+GGG | 0.677642 | 5:-18439318 | MsG0580025429.01.T01:CDS |
TTTCAACTTCTGAAACACAC+CGG | 0.689154 | 5:+18439739 | None:intergenic |
AGTGTAAATTGATATGCTGG+GGG | 0.695787 | 5:-18439784 | None:intergenic |
GCATGGTTAAGACAACGACG+AGG | 0.814706 | 5:-18438977 | MsG0580025429.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATAAAAAATATGTAAAGCT+AGG | - | Chr5:18438759-18438778 | MsG0580025429.01.T01:CDS | 15.0% |
!! | ATAAAAAATATGTAAAGCTA+GGG | - | Chr5:18438760-18438779 | MsG0580025429.01.T01:CDS | 15.0% |
!! | CTAAAATGTAAAAAAGAATA+TGG | - | Chr5:18438803-18438822 | MsG0580025429.01.T01:CDS | 15.0% |
!!! | AATTTTCTTACCAAATATTT+CGG | + | Chr5:18439771-18439790 | None:intergenic | 15.0% |
!!! | CATATTCTTTTTTACATTTT+AGG | + | Chr5:18438805-18438824 | None:intergenic | 15.0% |
!! | TAAAAAATATGTAAAGCTAG+GGG | - | Chr5:18438761-18438780 | MsG0580025429.01.T01:CDS | 20.0% |
! | AAAAAATATGTAAAGCTAGG+GGG | - | Chr5:18438762-18438781 | MsG0580025429.01.T01:CDS | 25.0% |
! | AATGTAAAAAAGAATATGGC+AGG | - | Chr5:18438807-18438826 | MsG0580025429.01.T01:CDS | 25.0% |
! | GATTAAATATGTACCTTGTT+CGG | + | Chr5:18438654-18438673 | None:intergenic | 25.0% |
! | TCTTTATTCTCTTTACAGTA+CGG | + | Chr5:18439421-18439440 | None:intergenic | 25.0% |
! | TTTGAAAAATGTGGAAAAGT+TGG | - | Chr5:18439013-18439032 | MsG0580025429.01.T01:CDS | 25.0% |
!! | AATTATTTGATGACATCGTA+TGG | - | Chr5:18438602-18438621 | MsG0580025429.01.T01:CDS | 25.0% |
AACAACATAAGGAACTATTC+AGG | - | Chr5:18438883-18438902 | MsG0580025429.01.T01:CDS | 30.0% | |
AATGTAAATGACAGCTGTAT+TGG | - | Chr5:18438845-18438864 | MsG0580025429.01.T01:CDS | 30.0% | |
ACCAAATATAAGAAAGAGCA+CGG | - | Chr5:18439463-18439482 | MsG0580025429.01.T01:intron | 30.0% | |
AGAAAAGAAGAATCATGAAC+CGG | - | Chr5:18439493-18439512 | MsG0580025429.01.T01:intron | 30.0% | |
ATATATATACAATCCGCTTC+TGG | - | Chr5:18438954-18438973 | MsG0580025429.01.T01:CDS | 30.0% | |
GTAAATATGCAAGACAATCA+AGG | - | Chr5:18439059-18439078 | MsG0580025429.01.T01:CDS | 30.0% | |
GTACTGTAAAGAGAATAAAG+AGG | - | Chr5:18439420-18439439 | MsG0580025429.01.T01:intron | 30.0% | |
TGAATAGTTCCTTATGTTGT+TGG | + | Chr5:18438884-18438903 | None:intergenic | 30.0% | |
! | CAAAACTCGATTTTGTGAAT+TGG | + | Chr5:18439726-18439745 | None:intergenic | 30.0% |
! | CTACATTTTTCTTGTTCTAC+CGG | + | Chr5:18439515-18439534 | None:intergenic | 30.0% |
AAATGTAGTACCTGTTCTTC+TGG | - | Chr5:18439628-18439647 | MsG0580025429.01.T01:CDS | 35.0% | |
AACATAAGGAACTATTCAGG+AGG | - | Chr5:18438886-18438905 | MsG0580025429.01.T01:CDS | 35.0% | |
AAGTTGAAACTCCATCATCA+TGG | - | Chr5:18438480-18438499 | MsG0580025429.01.T01:CDS | 35.0% | |
AATAAAGAGGATTCGTGAAC+GGG | - | Chr5:18439433-18439452 | MsG0580025429.01.T01:intron | 35.0% | |
ACATAAGGAACTATTCAGGA+GGG | - | Chr5:18438887-18438906 | MsG0580025429.01.T01:CDS | 35.0% | |
ACCGTGCTCTTTCTTATATT+TGG | + | Chr5:18439467-18439486 | None:intergenic | 35.0% | |
AGACAACAACGAAGTTTCTT+AGG | - | Chr5:18439291-18439310 | MsG0580025429.01.T01:CDS | 35.0% | |
AGCTCGGTAAAGACAAAAAA+GGG | - | Chr5:18439371-18439390 | MsG0580025429.01.T01:intron | 35.0% | |
AGTTGAAACTCCATCATCAT+GGG | - | Chr5:18438481-18438500 | MsG0580025429.01.T01:CDS | 35.0% | |
ATATTTCGGCAGTGATACAT+AGG | + | Chr5:18439757-18439776 | None:intergenic | 35.0% | |
CATATCATTCAACTCTCATG+TGG | - | Chr5:18438527-18438546 | MsG0580025429.01.T01:CDS | 35.0% | |
CGATGTCATCAAATAATTCC+AGG | + | Chr5:18438600-18438619 | None:intergenic | 35.0% | |
CGCTGGAAATTTGAAAAATG+TGG | - | Chr5:18439004-18439023 | MsG0580025429.01.T01:CDS | 35.0% | |
GAATAAAGAGGATTCGTGAA+CGG | - | Chr5:18439432-18439451 | MsG0580025429.01.T01:intron | 35.0% | |
TACCATAATAGAGACCAAGA+AGG | - | Chr5:18439565-18439584 | MsG0580025429.01.T01:intron | 35.0% | |
TATTTCGGCAGTGATACATA+GGG | + | Chr5:18439756-18439775 | None:intergenic | 35.0% | |
TGCATGGTAGAGAGAAAAAT+CGG | - | Chr5:18439137-18439156 | MsG0580025429.01.T01:CDS | 35.0% | |
TGTATCACTGCCGAAATATT+TGG | - | Chr5:18439758-18439777 | MsG0580025429.01.T01:CDS | 35.0% | |
! | TACCATGCACTTTGCTATAT+TGG | + | Chr5:18439126-18439145 | None:intergenic | 35.0% |
!! | TGGAAAAGTTGGTGAAAGAA+GGG | - | Chr5:18439024-18439043 | MsG0580025429.01.T01:CDS | 35.0% |
!! | TTTCAACTTCTGAAACACAC+CGG | + | Chr5:18438469-18438488 | None:intergenic | 35.0% |
AAGGGATTCCGTGAAGATTT+AGG | - | Chr5:18439389-18439408 | MsG0580025429.01.T01:intron | 40.0% | |
AGCTCTTTGCTAGTTGTTCA+CGG | + | Chr5:18439355-18439374 | None:intergenic | 40.0% | |
ATATACAATCCGCTTCTGGT+AGG | - | Chr5:18438958-18438977 | MsG0580025429.01.T01:CDS | 40.0% | |
CAAATAATTCCAGGCGTCTT+TGG | + | Chr5:18438591-18438610 | None:intergenic | 40.0% | |
CACCAATATAGCAAAGTGCA+TGG | - | Chr5:18439121-18439140 | MsG0580025429.01.T01:CDS | 40.0% | |
CACCTTCTTGGTCTCTATTA+TGG | + | Chr5:18439570-18439589 | None:intergenic | 40.0% | |
CATAATAGAGACCAAGAAGG+TGG | - | Chr5:18439568-18439587 | MsG0580025429.01.T01:CDS | 40.0% | |
GAGCTCGGTAAAGACAAAAA+AGG | - | Chr5:18439370-18439389 | MsG0580025429.01.T01:intron | 40.0% | |
TGAACAACTAGCAAAGAGCT+CGG | - | Chr5:18439355-18439374 | MsG0580025429.01.T01:intron | 40.0% | |
TGAACTAGAAGCAGAGAACA+TGG | - | Chr5:18439265-18439284 | MsG0580025429.01.T01:CDS | 40.0% | |
TGATGAGGAATCAGAATGCA+TGG | - | Chr5:18439166-18439185 | MsG0580025429.01.T01:CDS | 40.0% | |
! | AAACACATTGGAGGGAGTTT+TGG | + | Chr5:18439696-18439715 | None:intergenic | 40.0% |
! | ATTGGTTCCGTCAAACACAT+TGG | + | Chr5:18439708-18439727 | None:intergenic | 40.0% |
! | GCATGGTAATGACAACAAAG+AGG | - | Chr5:18439183-18439202 | MsG0580025429.01.T01:CDS | 40.0% |
! | GGCTGTTTCCTAAATCTTCA+CGG | + | Chr5:18439400-18439419 | None:intergenic | 40.0% |
!! | GTGGAAAAGTTGGTGAAAGA+AGG | - | Chr5:18439023-18439042 | MsG0580025429.01.T01:CDS | 40.0% |
AAAAATCGGACCTCGTGATG+AGG | - | Chr5:18439151-18439170 | MsG0580025429.01.T01:CDS | 45.0% | |
AAGAAGAGTCCTACCAGAAG+CGG | + | Chr5:18438970-18438989 | None:intergenic | 45.0% | |
ACTCCCTCCAATGTGTTTGA+CGG | - | Chr5:18439698-18439717 | MsG0580025429.01.T01:CDS | 45.0% | |
CATTCTGATTCCTCATCACG+AGG | + | Chr5:18439164-18439183 | None:intergenic | 45.0% | |
GCTCTTGTTGCTCGTTATAC+TGG | - | Chr5:18439095-18439114 | MsG0580025429.01.T01:CDS | 45.0% | |
GCTCTTTGCTAGTTGTTCAC+GGG | + | Chr5:18439354-18439373 | None:intergenic | 45.0% | |
GTCGAGAGAGGTGATTACAT+TGG | - | Chr5:18438909-18438928 | MsG0580025429.01.T01:CDS | 45.0% | |
GTTCCGTCAAACACATTGGA+GGG | + | Chr5:18439704-18439723 | None:intergenic | 45.0% | |
GTTCCTTATGTTGTTGGCCA+AGG | + | Chr5:18438878-18438897 | None:intergenic | 45.0% | |
TCCATCATCATGGGCAACAA+AGG | - | Chr5:18438490-18438509 | MsG0580025429.01.T01:CDS | 45.0% | |
TCCTTTGTTGCCCATGATGA+TGG | + | Chr5:18438494-18438513 | None:intergenic | 45.0% | |
TGAACTAGTAGCAGAGAGCA+TGG | - | Chr5:18439211-18439230 | MsG0580025429.01.T01:CDS | 45.0% | |
TTCACGTATCTCCACCTTCT+TGG | + | Chr5:18439582-18439601 | None:intergenic | 45.0% | |
! | TAGCCTTGGCCAACAACATA+AGG | - | Chr5:18438872-18438891 | MsG0580025429.01.T01:CDS | 45.0% |
CTTCACGTAGCAGTAATCGC+TGG | - | Chr5:18438987-18439006 | MsG0580025429.01.T01:CDS | 50.0% | |
GCATGGTTAAGACAACGACG+AGG | - | Chr5:18439228-18439247 | MsG0580025429.01.T01:CDS | 50.0% | |
GCTGTATTGGACGATAGCCT+TGG | - | Chr5:18438858-18438877 | MsG0580025429.01.T01:CDS | 50.0% | |
GGTTCCGTCAAACACATTGG+AGG | + | Chr5:18439705-18439724 | None:intergenic | 50.0% | |
TCAAAACAGCCAAAGACGCC+TGG | - | Chr5:18438579-18438598 | MsG0580025429.01.T01:CDS | 50.0% | |
TTAGCAGCAGCCAGAAGAAC+AGG | + | Chr5:18439641-18439660 | None:intergenic | 50.0% | |
! | GCTAGTTGTTCACGGGTTGT+GGG | + | Chr5:18439347-18439366 | None:intergenic | 50.0% |
! | GTTCTTCTGGCTGCTGCTAA+TGG | - | Chr5:18439641-18439660 | MsG0580025429.01.T01:CDS | 50.0% |
! | TGCTAGTTGTTCACGGGTTG+TGG | + | Chr5:18439348-18439367 | None:intergenic | 50.0% |
! | TTGTTCACGGGTTGTGGGAA+TGG | + | Chr5:18439342-18439361 | None:intergenic | 50.0% |
CTATTCAGGAGGGTCGAGAG+AGG | - | Chr5:18438897-18438916 | MsG0580025429.01.T01:CDS | 55.0% | |
GTATGTGGGGTGATGTGGTC+CGG | - | Chr5:18438447-18438466 | MsG0580025429.01.T01:CDS | 55.0% | |
ACCTTGTTCGGCATCTGCGC+TGG | + | Chr5:18438642-18438661 | None:intergenic | 60.0% | |
ATGCTGGGGGCAGGTATGTG+GGG | - | Chr5:18438434-18438453 | MsG0580025429.01.T01:CDS | 60.0% | |
GGCAGGTATGTGGGGTGATG+TGG | - | Chr5:18438442-18438461 | MsG0580025429.01.T01:CDS | 60.0% | |
GCCAGCGCAGATGCCGAACA+AGG | - | Chr5:18438638-18438657 | MsG0580025429.01.T01:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr5 | gene | 18438434 | 18439793 | 18438434 | ID=MsG0580025429.01;Name=MsG0580025429.01 |
Chr5 | mRNA | 18438434 | 18439793 | 18438434 | ID=MsG0580025429.01.T01;Parent=MsG0580025429.01;Name=MsG0580025429.01.T01;_AED=0.61;_eAED=0.61;_QI=0|0|0|1|1|1|2|0|386 |
Chr5 | exon | 18439568 | 18439793 | 18439568 | ID=MsG0580025429.01.T01:exon:30390;Parent=MsG0580025429.01.T01 |
Chr5 | exon | 18438434 | 18439368 | 18438434 | ID=MsG0580025429.01.T01:exon:30389;Parent=MsG0580025429.01.T01 |
Chr5 | CDS | 18439568 | 18439793 | 18439568 | ID=MsG0580025429.01.T01:cds;Parent=MsG0580025429.01.T01 |
Chr5 | CDS | 18438434 | 18439368 | 18438434 | ID=MsG0580025429.01.T01:cds;Parent=MsG0580025429.01.T01 |
Gene Sequence |
Protein sequence |