AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580025577.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580025577.01.T01 MTR_5g030860 95.437 789 30 3 1 789 1 783 0.0 1553
MsG0580025577.01.T01 MTR_3g074060 49.937 795 355 11 8 786 7 774 0.0 775
MsG0580025577.01.T01 MTR_5g062320 49.057 795 373 12 8 788 4 780 0.0 774
MsG0580025577.01.T01 MTR_5g062430 48.747 798 373 14 8 788 4 782 0.0 769
MsG0580025577.01.T01 MTR_5g062370 49.121 796 369 14 8 786 4 780 0.0 764
MsG0580025577.01.T01 MTR_1g087240 47.201 786 376 12 9 787 3 756 0.0 759
MsG0580025577.01.T01 MTR_7g109390 48.193 747 357 10 46 787 41 762 0.0 753
MsG0580025577.01.T01 MTR_5g062650 48.302 795 379 13 11 788 6 785 0.0 748
MsG0580025577.01.T01 MTR_4g094285 46.867 798 390 11 1 788 1 774 0.0 742
MsG0580025577.01.T01 MTR_2g034720 48.285 758 357 12 36 787 27 755 0.0 740
MsG0580025577.01.T01 MTR_2g008240 48.732 749 357 9 43 788 51 775 0.0 738
MsG0580025577.01.T01 MTR_1g106860 49.545 769 365 8 18 778 6 759 0.0 736
MsG0580025577.01.T01 MTR_5g062370 51.240 605 267 12 8 597 4 595 0.0 610
MsG0580025577.01.T01 MTR_5g067010 61.345 119 30 1 647 765 2 104 6.07e-40 143
MsG0580025577.01.T01 MTR_5g067030 58.871 124 26 1 666 789 40 138 2.58e-39 142
MsG0580025577.01.T01 MTR_6g028090 27.448 572 335 27 69 614 95 612 2.20e-30 127
MsG0580025577.01.T01 MTR_6g028120 26.018 565 352 23 69 614 76 593 1.48e-29 125
MsG0580025577.01.T01 MTR_6g028100 26.702 573 338 28 69 614 95 612 6.69e-29 123
MsG0580025577.01.T01 MTR_6g028110 26.353 573 340 30 69 614 96 613 1.60e-28 122
MsG0580025577.01.T01 MTR_6g028110 26.353 573 340 30 69 614 96 613 1.94e-28 122
MsG0580025577.01.T01 MTR_7g086030 25.087 578 341 26 69 614 71 588 2.22e-28 121
MsG0580025577.01.T01 MTR_7g086030 25.087 578 341 26 69 614 96 613 4.27e-28 120
MsG0580025577.01.T01 MTR_3g462820 25.323 620 341 27 47 596 22 589 1.07e-27 119
MsG0580025577.01.T01 MTR_3g079750 25.439 570 345 25 71 614 97 612 2.46e-27 118
MsG0580025577.01.T01 MTR_2g030000 25.823 577 347 27 66 614 91 614 1.61e-25 112
MsG0580025577.01.T01 MTR_5g069800 25.783 543 321 28 82 596 85 573 3.11e-25 111
MsG0580025577.01.T01 MTR_7g086010 26.509 381 223 16 63 426 100 440 5.44e-21 97.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580025577.01.T01 AT5G10560 62.217 794 281 6 7 787 4 791 0.0 1026
MsG0580025577.01.T01 AT1G78060 50.194 773 349 12 28 788 19 767 0.0 768
MsG0580025577.01.T01 AT1G02640 46.154 793 387 10 1 787 1 759 0.0 745
MsG0580025577.01.T01 AT5G09730 47.589 788 383 11 8 788 9 773 0.0 737
MsG0580025577.01.T01 AT5G64570 48.096 788 378 12 9 788 20 784 0.0 737
MsG0580025577.01.T01 AT5G49360 46.954 788 378 16 10 787 14 771 0.0 730
MsG0580025577.01.T01 AT3G19620 47.375 781 372 10 7 778 8 758 0.0 727
MsG0580025577.01.T01 AT5G64570 48.992 645 307 9 147 788 1 626 0.0 622
MsG0580025577.01.T01 AT5G64570 49.492 590 274 9 9 591 20 592 0.0 578
MsG0580025577.01.T01 AT5G09700 44.694 490 261 6 301 788 45 526 3.63e-142 429
MsG0580025577.01.T01 AT3G47000 27.604 576 332 29 68 614 76 595 1.74e-34 140
MsG0580025577.01.T01 AT3G47040 25.908 633 357 26 47 614 10 595 8.52e-32 132
MsG0580025577.01.T01 AT3G47010 24.448 634 375 27 42 614 6 596 1.07e-31 132
MsG0580025577.01.T01 AT3G47010 24.290 634 375 28 42 614 6 595 1.22e-29 125
MsG0580025577.01.T01 AT3G47050 26.202 603 360 28 45 596 8 576 8.83e-29 122
MsG0580025577.01.T01 AT3G47040 24.924 658 357 27 47 614 10 620 1.68e-27 119
MsG0580025577.01.T01 AT3G47000 30.214 374 208 17 68 425 76 412 5.51e-27 115
MsG0580025577.01.T01 AT3G47040 27.714 433 229 16 47 425 10 412 2.32e-25 110
MsG0580025577.01.T01 AT3G62710 25.000 564 345 24 82 614 124 640 3.06e-25 112
MsG0580025577.01.T01 AT5G04885 26.863 577 339 30 69 618 114 634 8.20e-25 110
MsG0580025577.01.T01 AT5G04885 26.863 577 339 30 69 618 97 617 8.63e-25 110
MsG0580025577.01.T01 AT5G04885 26.863 577 339 30 69 618 97 617 8.63e-25 110
MsG0580025577.01.T01 AT5G20940 25.823 577 335 27 69 614 99 613 4.36e-24 108
MsG0580025577.01.T01 AT3G47010 26.282 468 251 20 42 450 6 438 1.02e-23 105
MsG0580025577.01.T01 AT5G20950 25.124 605 354 25 66 643 90 622 2.67e-23 105
MsG0580025577.01.T01 AT5G20950 25.124 605 354 25 66 643 90 622 2.67e-23 105
MsG0580025577.01.T01 AT5G20950 25.413 606 351 26 66 643 168 700 2.75e-23 106
MsG0580025577.01.T01 AT3G47000 26.253 419 258 21 218 614 29 418 3.41e-23 103
MsG0580025577.01.T01 AT3G47010 24.272 412 274 19 218 614 29 417 5.42e-21 97.1
MsG0580025577.01.T01 AT3G47040 25.598 418 262 18 218 614 239 628 6.54e-21 98.2

Find 202 sgRNAs with CRISPR-Local

Find 381 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTGGGGTGGTGAAGAATTT+AGG 0.153390 5:-20779116 None:intergenic
ATCTATTGAAACAAGCATTT+TGG 0.176927 5:+20783495 MsG0580025577.01.T01:CDS
CGTTCTCTTTGGTTTCTTAT+TGG 0.193378 5:+20779434 MsG0580025577.01.T01:CDS
AAAAGGCAAGTTTGGCAAAT+TGG 0.210658 5:+20781998 MsG0580025577.01.T01:CDS
AACTAATCACAAGTATTCTT+TGG 0.231688 5:+20782854 MsG0580025577.01.T01:CDS
TTGTGCTAGCAAGGATCTTT+TGG 0.243022 5:+20781484 MsG0580025577.01.T01:CDS
CCAGTTATTCTAGTTCTTAC+TGG 0.258479 5:+20782793 MsG0580025577.01.T01:CDS
TATACTGGAAGTAGAGTATA+TGG 0.259318 5:+20783142 MsG0580025577.01.T01:CDS
CGGCATTTAACCGTTCTCTT+TGG 0.276482 5:+20779423 MsG0580025577.01.T01:CDS
AGTCCATCATATAAGCTTCT+TGG 0.280029 5:-20782541 None:intergenic
GAATTAGGTGGCGGTTATTC+AGG 0.283750 5:+20782176 MsG0580025577.01.T01:CDS
TGCTTATGATTTGGAGAAAT+GGG 0.286679 5:+20779724 MsG0580025577.01.T01:CDS
TGTTCTTACAATGAAGTTAA+TGG 0.297890 5:+20781452 MsG0580025577.01.T01:CDS
GGTAGGAGGGAGAAGGGGTT+GGG 0.311262 5:-20779133 None:intergenic
AAGACGATATCCTACGCTTT+TGG 0.325577 5:+20782577 MsG0580025577.01.T01:CDS
CTGCTTATGATTTGGAGAAA+TGG 0.328518 5:+20779723 MsG0580025577.01.T01:CDS
ATGGCAACTACGAGTGAATT+AGG 0.330374 5:+20782161 MsG0580025577.01.T01:CDS
GCACTAGCTGAAATCATCTT+TGG 0.332465 5:+20782907 MsG0580025577.01.T01:CDS
GAGGTTGTTCTTGTGGAGAT+GGG 0.335942 5:-20779203 None:intergenic
GTGGGGTACCCTGGTGAAGC+TGG 0.353051 5:+20782877 MsG0580025577.01.T01:CDS
ATGTTTAATGTTGGACAAGC+TGG 0.356387 5:+20779485 MsG0580025577.01.T01:CDS
TTGCAGATGAACAAGGAAAA+AGG 0.361423 5:+20783542 MsG0580025577.01.T01:CDS
TTGGGGTGGTGAAGAATTTA+GGG 0.362271 5:-20779115 None:intergenic
CCAGTAAGAACTAGAATAAC+TGG 0.363617 5:-20782793 None:intergenic
AAAGGCAAGTTTGGCAAATT+GGG 0.364940 5:+20781999 MsG0580025577.01.T01:CDS
GTAGGTTACACAACAGGATT+TGG 0.386373 5:+20781367 MsG0580025577.01.T01:intron
TGGTGATGTTGTTCTCTAAA+TGG 0.396382 5:+20783401 MsG0580025577.01.T01:CDS
CTTCAATGGATCAGTTAAAT+CGG 0.397385 5:+20779367 MsG0580025577.01.T01:CDS
ACTAATCACAAGTATTCTTT+GGG 0.398935 5:+20782855 MsG0580025577.01.T01:CDS
GGAAGTAGAGTATATGGATT+CGG 0.401250 5:+20783148 MsG0580025577.01.T01:CDS
GGAGAGAGATGTTGCAGAAT+GGG 0.402254 5:-20779181 None:intergenic
AATCCGACAAGCTGGGATTC+CGG 0.402751 5:-20783445 None:intergenic
CTTCACCAGTCCTTGTTCAA+TGG 0.406189 5:-20781898 None:intergenic
TCGCATTCCCATGTCGTTCA+TGG 0.408950 5:-20783077 None:intergenic
TGATGATGATGATGGTCTTA+TGG 0.413199 5:+20779676 MsG0580025577.01.T01:CDS
GTAGGAGGGAGAAGGGGTTG+GGG 0.413679 5:-20779132 None:intergenic
TGGTGGTTTGCATGGGTAGG+AGG 0.416917 5:-20779147 None:intergenic
CTTTGCGATGTCAATAGCTT+CGG 0.417359 5:-20782638 None:intergenic
ATGCGCCTTGGACTGTTTAA+CGG 0.422424 5:+20781966 MsG0580025577.01.T01:CDS
GGTGTCTCCTTAGCTATCAT+TGG 0.423153 5:+20782134 MsG0580025577.01.T01:CDS
GTAGACAAACTAAGTTTACT+TGG 0.424795 5:-20783217 None:intergenic
GGAGGGAGAAGGGGTTGGGG+TGG 0.425539 5:-20779129 None:intergenic
TGAGAGTGTGGTGGTTTGCA+TGG 0.426372 5:-20779155 None:intergenic
TTTCTTATTGGTTATGCTGT+TGG 0.428648 5:+20779446 MsG0580025577.01.T01:CDS
GAAGTAGAGTATATGGATTC+GGG 0.429609 5:+20783149 MsG0580025577.01.T01:CDS
GGTTATGCTGTTGGTGTTGA+AGG 0.430380 5:+20779455 MsG0580025577.01.T01:CDS
GAAATTTATTGATTATTGAT+TGG 0.431697 5:+20783625 MsG0580025577.01.T01:exon
TTCTCTGTTCAAATGCGCCT+TGG 0.433593 5:+20781954 MsG0580025577.01.T01:CDS
ATGAACGTTGGAGATTTAGA+TGG 0.439651 5:+20783370 MsG0580025577.01.T01:CDS
GTTCCTTCCCTTGGATAAGA+AGG 0.440509 5:+20782109 MsG0580025577.01.T01:CDS
TATGCTGTTGAGTTTGTTAG+AGG 0.440605 5:+20779605 MsG0580025577.01.T01:CDS
GATGAGAGAGGTTGTTCTTG+TGG 0.440619 5:-20779210 None:intergenic
GGTGGTTTGCATGGGTAGGA+GGG 0.443207 5:-20779146 None:intergenic
AACTCCTGGGGAGGATCCTA+TGG 0.443273 5:+20779571 MsG0580025577.01.T01:CDS
AGCACTTGAAGCTGCAAGAC+AGG 0.445314 5:+20782058 MsG0580025577.01.T01:CDS
AGAGGGATTCAAGGTGTTGA+GGG 0.447105 5:+20779623 MsG0580025577.01.T01:CDS
GTTACAGTGATTTCTCATAC+AGG 0.448038 5:+20783182 MsG0580025577.01.T01:CDS
GGGTAGGAGGGAGAAGGGGT+TGG 0.453387 5:-20779134 None:intergenic
AGAAACAAGTGGGGATTTGA+AGG 0.453827 5:+20781515 MsG0580025577.01.T01:CDS
ATTCTTTGGGTGGGGTACCC+TGG 0.455534 5:+20782868 MsG0580025577.01.T01:CDS
GGAGATGGAAGATGCGTTGT+TGG 0.457611 5:-20779270 None:intergenic
TTAGGTATGGATATTAATTG+TGG 0.457882 5:+20781846 MsG0580025577.01.T01:intron
GAGTTTGTTAGAGGGATTCA+AGG 0.458297 5:+20779614 MsG0580025577.01.T01:CDS
TGCATGGGTAGGAGGGAGAA+GGG 0.458580 5:-20779139 None:intergenic
ATCTTTGGAGAGTTCAATCC+AGG 0.462275 5:+20782922 MsG0580025577.01.T01:CDS
ATGCTGTTGGTGTTGAAGGT+AGG 0.463660 5:+20779459 MsG0580025577.01.T01:CDS
AGTAAAATGTCAACTCATCA+AGG 0.464388 5:-20783672 None:intergenic
CGACAATAAGTTCCTTCCCT+TGG 0.465825 5:+20782100 MsG0580025577.01.T01:CDS
AGAGGTTGTTCTTGTGGAGA+TGG 0.469444 5:-20779204 None:intergenic
GGCGCATTTGAACAGAGAAC+AGG 0.470051 5:-20781950 None:intergenic
TCAGACCACCATTGGTAAGA+TGG 0.470160 5:-20779305 None:intergenic
GGTCCTGGTGTCAACTTCAA+TGG 0.470190 5:+20779353 MsG0580025577.01.T01:CDS
GCTTCTTCTCAAACCACCAT+TGG 0.470519 5:-20783245 None:intergenic
GACGACTGAATCCGACAAGC+TGG 0.475278 5:-20783453 None:intergenic
AAGATGCGTTGTTGGAAAGT+TGG 0.477097 5:-20779262 None:intergenic
GGGAGAGAGATGTTGCAGAA+TGG 0.484966 5:-20779182 None:intergenic
CTGGAAGGCTTCCGATGACT+TGG 0.486815 5:+20783029 MsG0580025577.01.T01:CDS
TTGCATGGGTAGGAGGGAGA+AGG 0.489086 5:-20779140 None:intergenic
GAAGTTGACACCAGGACCAT+TGG 0.490541 5:-20779348 None:intergenic
TGCTGTTGGTGTTGAAGGTA+GGG 0.491642 5:+20779460 MsG0580025577.01.T01:CDS
AATTCACTCGTAGTTGCCAT+TGG 0.492114 5:-20782158 None:intergenic
ATCACAAGTATTCTTTGGGT+GGG 0.494073 5:+20782859 MsG0580025577.01.T01:CDS
CGCATTCCCATGTCGTTCAT+GGG 0.503462 5:-20783076 None:intergenic
ATTCTAGTTCTTACTGGTGG+AGG 0.503864 5:+20782799 MsG0580025577.01.T01:CDS
GGTAGGGCTATGTTTAATGT+TGG 0.504446 5:+20779476 MsG0580025577.01.T01:CDS
CACAACCACGAAACGGTGGC+TGG 0.507198 5:-20781400 None:intergenic
AGGTTGTTCTTGTGGAGATG+GGG 0.512440 5:-20779202 None:intergenic
TTTCAGCGAAGGAGACATCA+AGG 0.513259 5:-20782825 None:intergenic
GGGAGAGGACAGGAAACTCC+TGG 0.515936 5:+20779557 MsG0580025577.01.T01:CDS
TAGAGGGATTCAAGGTGTTG+AGG 0.519121 5:+20779622 MsG0580025577.01.T01:CDS
ACTTACCAGCCACCGTTTCG+TGG 0.519836 5:+20781395 MsG0580025577.01.T01:CDS
TGATGATGGTGAATCTTTGT+TGG 0.520401 5:-20779058 None:intergenic
CTCAAGTGTGGTATCTAGCC+CGG 0.520728 5:-20782686 None:intergenic
GGAGAGGACAGGAAACTCCT+GGG 0.520867 5:+20779558 MsG0580025577.01.T01:CDS
GATCCTTCACGTGGTTATCC+CGG 0.520976 5:+20783103 MsG0580025577.01.T01:CDS
TGGGATGCCAAGGTGGGAGA+TGG 0.521244 5:-20779285 None:intergenic
GTTGCTGATGTTCTTAAAGC+AGG 0.521708 5:+20781720 MsG0580025577.01.T01:CDS
GTTCAAAATATGACTGCCTA+AGG 0.526336 5:-20783572 None:intergenic
GTGTGGTGGTTTGCATGGGT+AGG 0.526491 5:-20779150 None:intergenic
CAGCAGCAACACGCGATACA+AGG 0.527114 5:-20782759 None:intergenic
CAGACCACCATTGGTAAGAT+GGG 0.527606 5:-20779304 None:intergenic
GAGAGTGTGGTGGTTTGCAT+GGG 0.532252 5:-20779154 None:intergenic
GGGTACCCTGGTGAAGCTGG+TGG 0.535576 5:+20782880 MsG0580025577.01.T01:CDS
GACCATTGGTTGCAATGCCA+TGG 0.537198 5:-20779334 None:intergenic
ATCTGCCATTGAACAAGGAC+TGG 0.539142 5:+20781893 MsG0580025577.01.T01:CDS
TGTTCCTGCTTGTGCTAGCA+AGG 0.540000 5:+20781475 MsG0580025577.01.T01:CDS
GTTATTCTAGTTCTTACTGG+TGG 0.540292 5:+20782796 MsG0580025577.01.T01:CDS
ATTGAACAAGGTAGAGAAAG+AGG 0.540999 5:+20783270 MsG0580025577.01.T01:CDS
CGGCGGAGACGATAACTTGA+GGG 0.541084 5:-20779400 None:intergenic
GGCATTGCAACCAATGGTCC+TGG 0.541232 5:+20779338 MsG0580025577.01.T01:CDS
GACACCATCCTTCTTATCCA+AGG 0.542842 5:-20782117 None:intergenic
CTTAGCTATCATTGGTCCAA+TGG 0.543498 5:+20782142 MsG0580025577.01.T01:CDS
TCACAAGTATTCTTTGGGTG+GGG 0.544928 5:+20782860 MsG0580025577.01.T01:CDS
GCACTTGAAGCTGCAAGACA+GGG 0.546519 5:+20782059 MsG0580025577.01.T01:CDS
CTCCATGGCATTGCAACCAA+TGG 0.547753 5:+20779332 MsG0580025577.01.T01:CDS
CATGTCGTTCATGGGAACAT+TGG 0.548046 5:-20783068 None:intergenic
CCTGGGGAGGATCCTATGGT+TGG 0.549403 5:+20779575 MsG0580025577.01.T01:CDS
AATCACAAGTATTCTTTGGG+TGG 0.549993 5:+20782858 MsG0580025577.01.T01:CDS
CAATGTTCCCATGAACGACA+TGG 0.550186 5:+20783069 MsG0580025577.01.T01:CDS
GGAGAGCTTCAGACCACCAT+TGG 0.550580 5:-20779313 None:intergenic
ACAAGGTCCATCTGTTTACC+AGG 0.555020 5:-20782742 None:intergenic
AGAAATGGGGAGAGTTCTCT+AGG 0.555342 5:+20779738 MsG0580025577.01.T01:CDS
ATGCTGTTGAGTTTGTTAGA+GGG 0.560660 5:+20779606 MsG0580025577.01.T01:CDS
GCATCCCATCTTACCAATGG+TGG 0.561057 5:+20779300 MsG0580025577.01.T01:CDS
CATATTTCTGTGATGAACGT+TGG 0.563427 5:+20783358 MsG0580025577.01.T01:CDS
CTTCCCTTGGATAAGAAGGA+TGG 0.564166 5:+20782113 MsG0580025577.01.T01:CDS
TAGGTATAATTTCAATGCTG+TGG 0.566313 5:+20779757 MsG0580025577.01.T01:CDS
TGTTGAACACAACCACGAAA+CGG 0.566356 5:-20781407 None:intergenic
GATCTCCGTTAAACAGTCCA+AGG 0.566435 5:-20781971 None:intergenic
TCACCGGAATCCCAGCTTGT+CGG 0.568362 5:+20783442 MsG0580025577.01.T01:CDS
GAGAGGACAGGAAACTCCTG+GGG 0.569079 5:+20779559 MsG0580025577.01.T01:CDS
AGAGTATATGGATTCGGGCA+TGG 0.569579 5:+20783154 MsG0580025577.01.T01:CDS
GGGACTGGTTAGAAACAAGT+GGG 0.569777 5:+20781505 MsG0580025577.01.T01:CDS
TGGGACTGGTTAGAAACAAG+TGG 0.570057 5:+20781504 MsG0580025577.01.T01:CDS
TCCGGTGTGCAAACATCTTG+AGG 0.570428 5:-20782023 None:intergenic
GGGAACATTGGTAAATGACT+CGG 0.571444 5:-20783056 None:intergenic
AGATCCTTGCTAGCACAAGC+AGG 0.573562 5:-20781479 None:intergenic
CAGAATGGGTAGTGAGAGTG+TGG 0.574292 5:-20779167 None:intergenic
ACTGAATCTGCCATTGAACA+AGG 0.576392 5:+20781888 MsG0580025577.01.T01:CDS
TGTTTAATGTTGGACAAGCT+GGG 0.579164 5:+20779486 MsG0580025577.01.T01:CDS
TCTTTGTTGGTGAAACATCA+TGG 0.579528 5:-20779045 None:intergenic
TTTCGTGGTTGTGTTCAACA+AGG 0.579630 5:+20781410 MsG0580025577.01.T01:CDS
TTCAAAATATGACTGCCTAA+GGG 0.581761 5:-20783571 None:intergenic
GACTCGGGATACCAAGTCAT+CGG 0.583344 5:-20783040 None:intergenic
GCATGGGTAGGAGGGAGAAG+GGG 0.586389 5:-20779138 None:intergenic
GGAACATTGGTAAATGACTC+GGG 0.588973 5:-20783055 None:intergenic
TCTCCAAGAAGCTTATATGA+TGG 0.589597 5:+20782538 MsG0580025577.01.T01:CDS
CATTGGACCAATGATAGCTA+AGG 0.589961 5:-20782141 None:intergenic
GGTTAGGAGAGAGATGAGAG+AGG 0.592728 5:-20779222 None:intergenic
AGTTTGTCTACAACAACCAA+TGG 0.594296 5:+20783229 MsG0580025577.01.T01:CDS
TTCGTGGTTGTGTTCAACAA+GGG 0.596970 5:+20781411 MsG0580025577.01.T01:CDS
GCATCTTCCATCTCCCACCT+TGG 0.598133 5:+20779278 MsG0580025577.01.T01:CDS
ACGACTGAATCCGACAAGCT+GGG 0.598779 5:-20783452 None:intergenic
TTCAGCTTTGCAGATGAACA+AGG 0.600883 5:+20783535 MsG0580025577.01.T01:CDS
TTACAGTGATTTCTCATACA+GGG 0.601546 5:+20783183 MsG0580025577.01.T01:CDS
CATTGAACAAGGACTGGTGA+AGG 0.602615 5:+20781899 MsG0580025577.01.T01:CDS
TGGTGGTCTGAAGCTCTCCA+TGG 0.603445 5:+20779317 MsG0580025577.01.T01:CDS
AAACAAGAAGATGATGATGA+TGG 0.605855 5:-20779072 None:intergenic
TGAACAAGGACTGGTGAAGG+AGG 0.606135 5:+20781902 MsG0580025577.01.T01:CDS
TTGTCTACAACAACCAATGG+TGG 0.608237 5:+20783232 MsG0580025577.01.T01:CDS
GAAACAAGTGGGGATTTGAA+GGG 0.608542 5:+20781516 MsG0580025577.01.T01:CDS
TTCAGCGAAGGAGACATCAA+GGG 0.613720 5:-20782824 None:intergenic
GGTAAGATGGGATGCCAAGG+TGG 0.614054 5:-20779292 None:intergenic
TTGGCATCCCATCTTACCAA+TGG 0.616463 5:+20779297 MsG0580025577.01.T01:CDS
AATGTTCCCATGAACGACAT+GGG 0.623562 5:+20783070 MsG0580025577.01.T01:CDS
TGCCTCAGACTGTGATGCCG+TGG 0.624596 5:+20781650 MsG0580025577.01.T01:CDS
GCGGCGGAGACGATAACTTG+AGG 0.625653 5:-20779401 None:intergenic
ACACCATCCTTCTTATCCAA+GGG 0.626527 5:-20782116 None:intergenic
GCTTATGATTTGGAGAAATG+GGG 0.631102 5:+20779725 MsG0580025577.01.T01:CDS
GGGTGGTGAAGAATTTAGGG+AGG 0.631127 5:-20779112 None:intergenic
ATTGGTAAGATGGGATGCCA+AGG 0.633941 5:-20779295 None:intergenic
AGATACCACACTTGAGACAG+AGG 0.637135 5:+20782693 MsG0580025577.01.T01:CDS
CTTCACGTGGTTATCCCGGA+AGG 0.639197 5:+20783107 MsG0580025577.01.T01:CDS
CAATAAGAAACCAAAGAGAA+CGG 0.640234 5:-20779433 None:intergenic
CACTTGAAGCTGCAAGACAG+GGG 0.640818 5:+20782060 MsG0580025577.01.T01:CDS
GCATAAGCAGAACCAACCAT+AGG 0.641006 5:-20779587 None:intergenic
AGCCACGGCATCACAGTCTG+AGG 0.641121 5:-20781652 None:intergenic
AAGATCCTCTGTCTCAAGTG+TGG 0.641328 5:-20782698 None:intergenic
ACCTCAAGATGTTTGCACAC+CGG 0.641813 5:+20782022 MsG0580025577.01.T01:CDS
CATGATAGTGATGATGATGA+TGG 0.643345 5:+20779668 MsG0580025577.01.T01:CDS
CATCCTTCTTATCCAAGGGA+AGG 0.643414 5:-20782112 None:intergenic
GTAAGATGGGATGCCAAGGT+GGG 0.645774 5:-20779291 None:intergenic
GCAAAGCTGAAGTGTTCACA+AGG 0.652733 5:-20783523 None:intergenic
GAGAAGAAGCTTATTGAACA+AGG 0.654692 5:+20783258 MsG0580025577.01.T01:CDS
AAGAGAACGGTTAAATGCCG+CGG 0.659391 5:-20779420 None:intergenic
ACTACGAGTGAATTAGGTGG+CGG 0.661317 5:+20782167 MsG0580025577.01.T01:CDS
CTTCCGGGATAACCACGTGA+AGG 0.662517 5:-20783106 None:intergenic
TCAGCGAAGGAGACATCAAG+GGG 0.662692 5:-20782823 None:intergenic
TCAAGTTATCGTCTCCGCCG+CGG 0.670832 5:+20779403 MsG0580025577.01.T01:CDS
AGGACAGGAAACTCCTGGGG+AGG 0.676521 5:+20779562 MsG0580025577.01.T01:CDS
CCAACCATAGGATCCTCCCC+AGG 0.676971 5:-20779575 None:intergenic
GATCCATTGAAGTTGACACC+AGG 0.677018 5:-20779356 None:intergenic
GTAAAATGTGACTCTGATGA+CGG 0.677311 5:+20782610 MsG0580025577.01.T01:CDS
AATGGGTAGTGAGAGTGTGG+TGG 0.679539 5:-20779164 None:intergenic
ATACTCGTAAACAGTAGCCA+CGG 0.681138 5:-20781667 None:intergenic
TGAACACAACCACGAAACGG+TGG 0.689577 5:-20781404 None:intergenic
ATCACGGCAACCAAAAGCGT+AGG 0.692115 5:-20782587 None:intergenic
GGACTGGTTAGAAACAAGTG+GGG 0.700358 5:+20781506 MsG0580025577.01.T01:CDS
AGATTTAGATGGAAGTCACG+TGG 0.702607 5:+20783381 MsG0580025577.01.T01:CDS
ATGCGAGCTGATCCTTCACG+TGG 0.711213 5:+20783094 MsG0580025577.01.T01:CDS
GCAACTACGAGTGAATTAGG+TGG 0.722972 5:+20782164 MsG0580025577.01.T01:CDS
AGAACGGTTAAATGCCGCGG+CGG 0.733295 5:-20779417 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAATTCATCAATTAAATTTT+AGG + Chr5:20781828-20781847 MsG0580025577.01.T01:intron 10.0%
!! ATTATTACTATGTTTGAATA+TGG + Chr5:20781323-20781342 MsG0580025577.01.T01:intron 15.0%
!!! GAAATTTATTGATTATTGAT+TGG + Chr5:20783625-20783644 MsG0580025577.01.T01:exon 15.0%
!!! TTTTTACTGATTATTAGAAT+TGG + Chr5:20781599-20781618 MsG0580025577.01.T01:intron 15.0%
!! AAATTCCTACATTATTAGAT+AGG - Chr5:20782513-20782532 None:intergenic 20.0%
!! AATAAGCTAAAAACAACATA+TGG + Chr5:20780957-20780976 MsG0580025577.01.T01:intron 20.0%
!! AATCAGTAAAAATAAAGCTT+TGG - Chr5:20781591-20781610 None:intergenic 20.0%
!! ATCCAATTCATATAAAATCT+TGG - Chr5:20781792-20781811 None:intergenic 20.0%
!! ATTGATGAATTAAAATACCT+TGG - Chr5:20781820-20781839 None:intergenic 20.0%
!! ATTGCATTCAATACTAAATT+AGG + Chr5:20780802-20780821 MsG0580025577.01.T01:intron 20.0%
!! GGAAACATTAATAATCTTAA+TGG - Chr5:20782492-20782511 None:intergenic 20.0%
!! TCTTAAATTTCCATATCATT+TGG + Chr5:20782466-20782485 MsG0580025577.01.T01:intron 20.0%
!!! AAGATTTTATATGAATTGGA+TGG + Chr5:20781791-20781810 MsG0580025577.01.T01:intron 20.0%
!!! ATAAGTATGAGTTTTGTTTT+TGG + Chr5:20781182-20781201 MsG0580025577.01.T01:intron 20.0%
!!! CATCAATTAAATTTTAGGTA+TGG + Chr5:20781833-20781852 MsG0580025577.01.T01:intron 20.0%
!!! GGTATTTTTTTTCTTCATAT+TGG + Chr5:20782197-20782216 MsG0580025577.01.T01:intron 20.0%
!!! TAAGTATGAGTTTTGTTTTT+GGG + Chr5:20781183-20781202 MsG0580025577.01.T01:intron 20.0%
!!! TTCCAAGATTTTATATGAAT+TGG + Chr5:20781787-20781806 MsG0580025577.01.T01:intron 20.0%
!!! TTTGTGATTTTTGTTGATAA+CGG + Chr5:20780564-20780583 MsG0580025577.01.T01:intron 20.0%
! AACTAATCACAAGTATTCTT+TGG + Chr5:20782854-20782873 MsG0580025577.01.T01:CDS 25.0%
! ACATTGTATTAAGTGAATCA+GGG + Chr5:20782298-20782317 MsG0580025577.01.T01:intron 25.0%
! ACTAATCACAAGTATTCTTT+GGG + Chr5:20782855-20782874 MsG0580025577.01.T01:CDS 25.0%
! ATAGAAGTGATTTCTCTATT+TGG - Chr5:20781068-20781087 None:intergenic 25.0%
! ATCAAATAAGTCAATCCAAA+AGG + Chr5:20780037-20780056 MsG0580025577.01.T01:intron 25.0%
! ATCAATATTGATCATCAGTA+TGG - Chr5:20780543-20780562 None:intergenic 25.0%
! GATCGATATAGCATATAATT+CGG - Chr5:20782365-20782384 None:intergenic 25.0%
! TACATTGTATTAAGTGAATC+AGG + Chr5:20782297-20782316 MsG0580025577.01.T01:intron 25.0%
! TCAAATAAGTCAATCCAAAA+GGG + Chr5:20780038-20780057 MsG0580025577.01.T01:intron 25.0%
! TCATTAACAAAATACATACC+TGG - Chr5:20782943-20782962 None:intergenic 25.0%
! TCCCTAAAAACATTAACATT+CGG - Chr5:20779527-20779546 None:intergenic 25.0%
! TCTCTTACATGTTATATTCT+TGG + Chr5:20780700-20780719 MsG0580025577.01.T01:intron 25.0%
! TCTTTGTCTTTGTAAATTTG+TGG + Chr5:20781749-20781768 MsG0580025577.01.T01:intron 25.0%
! TGTTCTTACAATGAAGTTAA+TGG + Chr5:20781452-20781471 MsG0580025577.01.T01:CDS 25.0%
! TGTTTCCTATCTAATAATGT+AGG + Chr5:20782505-20782524 MsG0580025577.01.T01:intron 25.0%
! TTAGGTATGGATATTAATTG+TGG + Chr5:20781846-20781865 MsG0580025577.01.T01:intron 25.0%
!! ACATTTTACTGCTTATGATT+TGG + Chr5:20779715-20779734 MsG0580025577.01.T01:CDS 25.0%
!! ATCTATTGAAACAAGCATTT+TGG + Chr5:20783495-20783514 MsG0580025577.01.T01:CDS 25.0%
!! TTAAGTTGTTTATCCAAACA+TGG - Chr5:20779821-20779840 None:intergenic 25.0%
!! TTGGGATTTCAAAAGTTTTA+AGG + Chr5:20780659-20780678 MsG0580025577.01.T01:intron 25.0%
!!! AAGTATGAGTTTTGTTTTTG+GGG + Chr5:20781184-20781203 MsG0580025577.01.T01:intron 25.0%
!!! AGTATTGAATGCAATGTTTT+GGG - Chr5:20780797-20780816 None:intergenic 25.0%
!!! CTTTACATGTTTTGGTAAAT+TGG + Chr5:20781127-20781146 MsG0580025577.01.T01:intron 25.0%
!!! CTTTAGCTTATCTTTTGTTA+AGG - Chr5:20779887-20779906 None:intergenic 25.0%
!!! TAGCTGAATTTAATTTTGCT+AGG + Chr5:20781245-20781264 MsG0580025577.01.T01:intron 25.0%
!!! TAGTATTGAATGCAATGTTT+TGG - Chr5:20780798-20780817 None:intergenic 25.0%
!!! TCCGAATGTTAATGTTTTTA+GGG + Chr5:20779523-20779542 MsG0580025577.01.T01:CDS 25.0%
!!! TTTTATTGACTTTTGAGTGT+AGG + Chr5:20781622-20781641 MsG0580025577.01.T01:intron 25.0%
AAAAGATTCCATAAATGCTG+GGG - Chr5:20780435-20780454 None:intergenic 30.0%
AAATCCCAACTATAGATTTG+GGG - Chr5:20780648-20780667 None:intergenic 30.0%
AAATGGCCTAAAAATATACG+AGG + Chr5:20783418-20783437 MsG0580025577.01.T01:CDS 30.0%
AATTCGGAAATCAGTAAACT+AGG - Chr5:20782349-20782368 None:intergenic 30.0%
AGAGCTTAACTATTAGCATA+AGG - Chr5:20781031-20781050 None:intergenic 30.0%
AGATATTAGAGAAAGATCTG+CGG - Chr5:20780153-20780172 None:intergenic 30.0%
AGTAAAATGTCAACTCATCA+AGG - Chr5:20783675-20783694 None:intergenic 30.0%
ATCTTAATGGCCAAATGATA+TGG - Chr5:20782479-20782498 None:intergenic 30.0%
CAAAAGATTCCATAAATGCT+GGG - Chr5:20780436-20780455 None:intergenic 30.0%
CAATAAGAAACCAAAGAGAA+CGG - Chr5:20779436-20779455 None:intergenic 30.0%
CATGTAAGAGATAACTCAAA+CGG - Chr5:20780691-20780710 None:intergenic 30.0%
CTCTACTTCCAGTATAAAAA+CGG - Chr5:20783138-20783157 None:intergenic 30.0%
CTTACATGTTATATTCTTGG+TGG + Chr5:20780703-20780722 MsG0580025577.01.T01:intron 30.0%
CTTCAATGGATCAGTTAAAT+CGG + Chr5:20779367-20779386 MsG0580025577.01.T01:CDS 30.0%
GAAATCCCAACTATAGATTT+GGG - Chr5:20780649-20780668 None:intergenic 30.0%
GTAGACAAACTAAGTTTACT+TGG - Chr5:20783220-20783239 None:intergenic 30.0%
TAAAAATATACGAGGTTCAC+CGG + Chr5:20783426-20783445 MsG0580025577.01.T01:CDS 30.0%
TAGGTATAATTTCAATGCTG+TGG + Chr5:20779757-20779776 MsG0580025577.01.T01:CDS 30.0%
TATACTGGAAGTAGAGTATA+TGG + Chr5:20783142-20783161 MsG0580025577.01.T01:CDS 30.0%
TCAAAAGATTCCATAAATGC+TGG - Chr5:20780437-20780456 None:intergenic 30.0%
TCAATACTAAATTAGGTGAG+TGG + Chr5:20780809-20780828 MsG0580025577.01.T01:intron 30.0%
TGAAAAATATTACCGAGCTT+TGG + Chr5:20782388-20782407 MsG0580025577.01.T01:intron 30.0%
TGAAATCCCAACTATAGATT+TGG - Chr5:20780650-20780669 None:intergenic 30.0%
TTACAGTGATTTCTCATACA+GGG + Chr5:20783183-20783202 MsG0580025577.01.T01:CDS 30.0%
TTCAAAATATGACTGCCTAA+GGG - Chr5:20783574-20783593 None:intergenic 30.0%
TTTAAGTGACTGTGAGTATA+GGG + Chr5:20782411-20782430 MsG0580025577.01.T01:intron 30.0%
! AAACAAGAAGATGATGATGA+TGG - Chr5:20779075-20779094 None:intergenic 30.0%
! AATCAGGGAATGTTTTCTTA+TGG + Chr5:20782313-20782332 MsG0580025577.01.T01:intron 30.0%
! CTCCGAATGTTAATGTTTTT+AGG + Chr5:20779522-20779541 MsG0580025577.01.T01:CDS 30.0%
! TAGTTGATTATTTTCAGCGA+AGG - Chr5:20782839-20782858 None:intergenic 30.0%
! TATTGAAACAAGCATTTTGG+TGG + Chr5:20783498-20783517 MsG0580025577.01.T01:CDS 30.0%
! TGCTTATGATTTGGAGAAAT+GGG + Chr5:20779724-20779743 MsG0580025577.01.T01:CDS 30.0%
! TGTTTTCGTATAAGCTATCA+TGG + Chr5:20779913-20779932 MsG0580025577.01.T01:intron 30.0%
! TTTCTTATTGGTTATGCTGT+TGG + Chr5:20779446-20779465 MsG0580025577.01.T01:CDS 30.0%
!! ATTTTGTTGTAATAGTTGCC+GGG + Chr5:20782668-20782687 MsG0580025577.01.T01:CDS 30.0%
!! GATTTTGTTGTAATAGTTGC+CGG + Chr5:20782667-20782686 MsG0580025577.01.T01:CDS 30.0%
!! GGTTATTTTGTCAAAGATGA+CGG - Chr5:20780334-20780353 None:intergenic 30.0%
!!! AACGGTCATACTGATTTTTA+AGG + Chr5:20780492-20780511 MsG0580025577.01.T01:intron 30.0%
!!! ACGGTCATACTGATTTTTAA+GGG + Chr5:20780493-20780512 MsG0580025577.01.T01:intron 30.0%
!!! AGTATGAGTTTTGTTTTTGG+GGG + Chr5:20781185-20781204 MsG0580025577.01.T01:intron 30.0%
!!! AGTGCTAATTTTTTGTGTTC+CGG - Chr5:20782044-20782063 None:intergenic 30.0%
!!! TTAATGTTTTTAGGGATCCT+AGG + Chr5:20779531-20779550 MsG0580025577.01.T01:CDS 30.0%
AAAAGGCAAGTTTGGCAAAT+TGG + Chr5:20781998-20782017 MsG0580025577.01.T01:CDS 35.0%
AAAGGCAAGTTTGGCAAATT+GGG + Chr5:20781999-20782018 MsG0580025577.01.T01:CDS 35.0%
AACAATAACCCCAGCATTTA+TGG + Chr5:20780424-20780443 MsG0580025577.01.T01:intron 35.0%
AATCACAAGTATTCTTTGGG+TGG + Chr5:20782858-20782877 MsG0580025577.01.T01:CDS 35.0%
AATCCCAACTATAGATTTGG+GGG - Chr5:20780647-20780666 None:intergenic 35.0%
ACTTCCAGTATAAAAACGGT+AGG - Chr5:20783134-20783153 None:intergenic 35.0%
AGTCCATCATATAAGCTTCT+TGG - Chr5:20782544-20782563 None:intergenic 35.0%
AGTTTGTCTACAACAACCAA+TGG + Chr5:20783229-20783248 MsG0580025577.01.T01:CDS 35.0%
ATACTAAATTAGGTGAGTGG+CGG + Chr5:20780812-20780831 MsG0580025577.01.T01:intron 35.0%
ATCACAAGTATTCTTTGGGT+GGG + Chr5:20782859-20782878 MsG0580025577.01.T01:CDS 35.0%
ATGAACGTTGGAGATTTAGA+TGG + Chr5:20783370-20783389 MsG0580025577.01.T01:CDS 35.0%
ATGTTTAATGTTGGACAAGC+TGG + Chr5:20779485-20779504 MsG0580025577.01.T01:CDS 35.0%
ATTCTTCATTACACGAACGA+GGG + Chr5:20780228-20780247 MsG0580025577.01.T01:intron 35.0%
ATTGAACAAGGTAGAGAAAG+AGG + Chr5:20783270-20783289 MsG0580025577.01.T01:CDS 35.0%
CAATCCAAAAGGGAGTTATA+AGG + Chr5:20780048-20780067 MsG0580025577.01.T01:intron 35.0%
CCAGTAAGAACTAGAATAAC+TGG - Chr5:20782796-20782815 None:intergenic 35.0%
GAAGTAGAGTATATGGATTC+GGG + Chr5:20783149-20783168 MsG0580025577.01.T01:CDS 35.0%
GAGAAGAAGCTTATTGAACA+AGG + Chr5:20783258-20783277 MsG0580025577.01.T01:CDS 35.0%
GGAAGTAGAGTATATGGATT+CGG + Chr5:20783148-20783167 MsG0580025577.01.T01:CDS 35.0%
GTAAAATGTGACTCTGATGA+CGG + Chr5:20782610-20782629 MsG0580025577.01.T01:CDS 35.0%
GTTACAGTGATTTCTCATAC+AGG + Chr5:20783182-20783201 MsG0580025577.01.T01:CDS 35.0%
GTTCAAAATATGACTGCCTA+AGG - Chr5:20783575-20783594 None:intergenic 35.0%
GTTTAAGTGACTGTGAGTAT+AGG + Chr5:20782410-20782429 MsG0580025577.01.T01:intron 35.0%
GTTTATCCAAACATGGTCAA+AGG - Chr5:20779814-20779833 None:intergenic 35.0%
TACCTCTACAGTGTTATCAA+GGG + Chr5:20780763-20780782 MsG0580025577.01.T01:intron 35.0%
TACTATAGTACCACGAGAAA+AGG - Chr5:20782279-20782298 None:intergenic 35.0%
TACTCCAAAAGGGAGTTATA+AGG + Chr5:20780900-20780919 MsG0580025577.01.T01:intron 35.0%
TATGAATTGGATGGTTTCCA+AGG + Chr5:20781800-20781819 MsG0580025577.01.T01:intron 35.0%
TCAAACAGTAGATAAGATGC+TGG + Chr5:20780006-20780025 MsG0580025577.01.T01:intron 35.0%
TCTCCAAGAAGCTTATATGA+TGG + Chr5:20782538-20782557 MsG0580025577.01.T01:CDS 35.0%
TGATTTCCCATTTGACAGAA+AGG + Chr5:20782437-20782456 MsG0580025577.01.T01:intron 35.0%
TGCTGGATTGAGTATTTCAA+CGG + Chr5:20780474-20780493 MsG0580025577.01.T01:intron 35.0%
TGTTTAATGTTGGACAAGCT+GGG + Chr5:20779486-20779505 MsG0580025577.01.T01:CDS 35.0%
TTAAGTGACTGTGAGTATAG+GGG + Chr5:20782412-20782431 MsG0580025577.01.T01:intron 35.0%
TTACCTCTACAGTGTTATCA+AGG + Chr5:20780762-20780781 MsG0580025577.01.T01:intron 35.0%
TTGCAGATGAACAAGGAAAA+AGG + Chr5:20783542-20783561 MsG0580025577.01.T01:CDS 35.0%
TTTAACGGAGATCCGAAAAA+AGG + Chr5:20781981-20782000 MsG0580025577.01.T01:CDS 35.0%
! AATATGGTGTTGAGTGCAAT+AGG + Chr5:20781339-20781358 MsG0580025577.01.T01:intron 35.0%
! CAGAGTCACATTTTACATCA+CGG - Chr5:20782606-20782625 None:intergenic 35.0%
! CATATTTCTGTGATGAACGT+TGG + Chr5:20783358-20783377 MsG0580025577.01.T01:CDS 35.0%
! CATGATAGTGATGATGATGA+TGG + Chr5:20779668-20779687 MsG0580025577.01.T01:CDS 35.0%
! CGTTCTCTTTGGTTTCTTAT+TGG + Chr5:20779434-20779453 MsG0580025577.01.T01:CDS 35.0%
! CTGCTTATGATTTGGAGAAA+TGG + Chr5:20779723-20779742 MsG0580025577.01.T01:CDS 35.0%
! GCTTATGATTTGGAGAAATG+GGG + Chr5:20779725-20779744 MsG0580025577.01.T01:CDS 35.0%
! GGTGAACCTCGTATATTTTT+AGG - Chr5:20783427-20783446 None:intergenic 35.0%
! GTTTTTGTAGGTTACACAAC+AGG + Chr5:20781361-20781380 MsG0580025577.01.T01:intron 35.0%
! TCAACCTTATAACTCCCTTT+TGG - Chr5:20780907-20780926 None:intergenic 35.0%
! TCAGTAATTTTGTCATCACG+AGG - Chr5:20780851-20780870 None:intergenic 35.0%
! TCTTTGTTGGTGAAACATCA+TGG - Chr5:20779048-20779067 None:intergenic 35.0%
! TCTTTTACCTGGTAAACAGA+TGG + Chr5:20782735-20782754 MsG0580025577.01.T01:CDS 35.0%
! TGAGTGCAATAGGTTTTTGT+AGG + Chr5:20781349-20781368 MsG0580025577.01.T01:intron 35.0%
! TGGTGATGTTGTTCTCTAAA+TGG + Chr5:20783401-20783420 MsG0580025577.01.T01:CDS 35.0%
! TGTCTGTGCTTTACATGTTT+TGG + Chr5:20781119-20781138 MsG0580025577.01.T01:intron 35.0%
!! ATGCTGTTGAGTTTGTTAGA+GGG + Chr5:20779606-20779625 MsG0580025577.01.T01:CDS 35.0%
!! CAGTCATATTTTGAACGTAG+GGG + Chr5:20783579-20783598 MsG0580025577.01.T01:CDS 35.0%
!! CCAGTTATTCTAGTTCTTAC+TGG + Chr5:20782793-20782812 MsG0580025577.01.T01:CDS 35.0%
!! GCAGTCATATTTTGAACGTA+GGG + Chr5:20783578-20783597 MsG0580025577.01.T01:CDS 35.0%
!! GGAAAGTTGGTTGATTTTGT+CGG - Chr5:20779252-20779271 None:intergenic 35.0%
!! GTTATTCTAGTTCTTACTGG+TGG + Chr5:20782796-20782815 MsG0580025577.01.T01:CDS 35.0%
!! TATGCTGTTGAGTTTGTTAG+AGG + Chr5:20779605-20779624 MsG0580025577.01.T01:CDS 35.0%
!! TGATGATGATGATGGTCTTA+TGG + Chr5:20779676-20779695 MsG0580025577.01.T01:CDS 35.0%
!! TGATGATGGTGAATCTTTGT+TGG - Chr5:20779061-20779080 None:intergenic 35.0%
!!! TTGCCAAACTTGCCTTTTTT+CGG - Chr5:20781996-20782015 None:intergenic 35.0%
AAAGCAGCCTTTCTGTCAAA+TGG - Chr5:20782447-20782466 None:intergenic 40.0%
AACATGTAAAGCACAGACAC+TGG - Chr5:20781118-20781137 None:intergenic 40.0%
AAGATGCGTTGTTGGAAAGT+TGG - Chr5:20779265-20779284 None:intergenic 40.0%
AAGCAGCCTTTCTGTCAAAT+GGG - Chr5:20782446-20782465 None:intergenic 40.0%
AATGTTCCCATGAACGACAT+GGG + Chr5:20783070-20783089 MsG0580025577.01.T01:CDS 40.0%
AATTCACTCGTAGTTGCCAT+TGG - Chr5:20782161-20782180 None:intergenic 40.0%
ACACCATCCTTCTTATCCAA+GGG - Chr5:20782119-20782138 None:intergenic 40.0%
ACTATAGATTTGGGGGATCT+CGG - Chr5:20780640-20780659 None:intergenic 40.0%
ACTGAATCTGCCATTGAACA+AGG + Chr5:20781888-20781907 MsG0580025577.01.T01:CDS 40.0%
AGAAACAAGTGGGGATTTGA+AGG + Chr5:20781515-20781534 MsG0580025577.01.T01:CDS 40.0%
AGATCCCCCAAATCTATAGT+TGG + Chr5:20780640-20780659 MsG0580025577.01.T01:intron 40.0%
AGATTTAGATGGAAGTCACG+TGG + Chr5:20783381-20783400 MsG0580025577.01.T01:CDS 40.0%
AGGGAGTTATAAGGTTGACT+TGG + Chr5:20780909-20780928 MsG0580025577.01.T01:intron 40.0%
ATAAAAACGGTAGGTCCTTC+CGG - Chr5:20783125-20783144 None:intergenic 40.0%
ATACTCGTAAACAGTAGCCA+CGG - Chr5:20781670-20781689 None:intergenic 40.0%
ATGCTGGGGTTATTGTTCTA+AGG - Chr5:20780421-20780440 None:intergenic 40.0%
ATGGCAACTACGAGTGAATT+AGG + Chr5:20782161-20782180 MsG0580025577.01.T01:CDS 40.0%
ATTTGAAGGGTAAGGGTTTG+AGG + Chr5:20781529-20781548 MsG0580025577.01.T01:intron 40.0%
CAGTCACTTAAACCAAAGCT+CGG - Chr5:20782403-20782422 None:intergenic 40.0%
CATTCTTCATTACACGAACG+AGG + Chr5:20780227-20780246 MsG0580025577.01.T01:intron 40.0%
CATTGGACCAATGATAGCTA+AGG - Chr5:20782144-20782163 None:intergenic 40.0%
CCAAAAGGGAGTTATAAGGT+TGG + Chr5:20780052-20780071 MsG0580025577.01.T01:intron 40.0%
CTGTCGACATTACTCCAAAA+GGG + Chr5:20780890-20780909 MsG0580025577.01.T01:intron 40.0%
CTTAGCTATCATTGGTCCAA+TGG + Chr5:20782142-20782161 MsG0580025577.01.T01:CDS 40.0%
CTTTGCGATGTCAATAGCTT+CGG - Chr5:20782641-20782660 None:intergenic 40.0%
GAAACAAGTGGGGATTTGAA+GGG + Chr5:20781516-20781535 MsG0580025577.01.T01:CDS 40.0%
GATCCCCCAAATCTATAGTT+GGG + Chr5:20780641-20780660 MsG0580025577.01.T01:intron 40.0%
GATCCGAAAAAAGGCAAGTT+TGG + Chr5:20781990-20782009 MsG0580025577.01.T01:CDS 40.0%
GCACTAGCTGAAATCATCTT+TGG + Chr5:20782907-20782926 MsG0580025577.01.T01:CDS 40.0%
GGAAAAAGGATATTGCCCTT+AGG + Chr5:20783556-20783575 MsG0580025577.01.T01:CDS 40.0%
GGAACATTGGTAAATGACTC+GGG - Chr5:20783058-20783077 None:intergenic 40.0%
GGGAACATTGGTAAATGACT+CGG - Chr5:20783059-20783078 None:intergenic 40.0%
GGTAGGGCTATGTTTAATGT+TGG + Chr5:20779476-20779495 MsG0580025577.01.T01:CDS 40.0%
GTAGGTTACACAACAGGATT+TGG + Chr5:20781367-20781386 MsG0580025577.01.T01:intron 40.0%
GTTGCTGATGTTCTTAAAGC+AGG + Chr5:20781720-20781739 MsG0580025577.01.T01:CDS 40.0%
TAGCAACTTATCAGCTTCGT+CGG + Chr5:20780272-20780291 MsG0580025577.01.T01:intron 40.0%
TCACAAGTATTCTTTGGGTG+GGG + Chr5:20782860-20782879 MsG0580025577.01.T01:CDS 40.0%
TCTACAGTGTTATCAAGGGT+AGG + Chr5:20780767-20780786 MsG0580025577.01.T01:intron 40.0%
TCTGTCGACATTACTCCAAA+AGG + Chr5:20780889-20780908 MsG0580025577.01.T01:intron 40.0%
TGCTGGGGTTATTGTTCTAA+GGG - Chr5:20780420-20780439 None:intergenic 40.0%
TGTTGAACACAACCACGAAA+CGG - Chr5:20781410-20781429 None:intergenic 40.0%
TTCAGCTTTGCAGATGAACA+AGG + Chr5:20783535-20783554 MsG0580025577.01.T01:CDS 40.0%
TTCGTGGTTGTGTTCAACAA+GGG + Chr5:20781411-20781430 MsG0580025577.01.T01:CDS 40.0%
TTGGGGTGGTGAAGAATTTA+GGG - Chr5:20779118-20779137 None:intergenic 40.0%
TTGTCTACAACAACCAATGG+TGG + Chr5:20783232-20783251 MsG0580025577.01.T01:CDS 40.0%
TTTCGTGGTTGTGTTCAACA+AGG + Chr5:20781410-20781429 MsG0580025577.01.T01:CDS 40.0%
TTTGAGCCTTTGACCATGTT+TGG + Chr5:20779805-20779824 MsG0580025577.01.T01:intron 40.0%
! AAGACGATATCCTACGCTTT+TGG + Chr5:20782577-20782596 MsG0580025577.01.T01:CDS 40.0%
! ATCTTTGGAGAGTTCAATCC+AGG + Chr5:20782922-20782941 MsG0580025577.01.T01:CDS 40.0%
! CCAACCTTATAACTCCCTTT+TGG - Chr5:20780055-20780074 None:intergenic 40.0%
! TACCCTTGATAACACTGTAG+AGG - Chr5:20780768-20780787 None:intergenic 40.0%
! TGTGCTAGCAAGGATCTTTT+GGG + Chr5:20781485-20781504 MsG0580025577.01.T01:CDS 40.0%
! TTGTGCTAGCAAGGATCTTT+TGG + Chr5:20781484-20781503 MsG0580025577.01.T01:CDS 40.0%
!! ACAAGCTGGGTTGAGTTTTT+GGG + Chr5:20779499-20779518 MsG0580025577.01.T01:CDS 40.0%
!! AGGACCTACCGTTTTTATAC+TGG + Chr5:20783127-20783146 MsG0580025577.01.T01:CDS 40.0%
!! ATTCTAGTTCTTACTGGTGG+AGG + Chr5:20782799-20782818 MsG0580025577.01.T01:CDS 40.0%
!! GAGTTATAAGGTTGACTTGG+TGG + Chr5:20780912-20780931 MsG0580025577.01.T01:intron 40.0%
!! GAGTTTGTTAGAGGGATTCA+AGG + Chr5:20779614-20779633 MsG0580025577.01.T01:CDS 40.0%
!! GGCAGTCATATTTTGAACGT+AGG + Chr5:20783577-20783596 MsG0580025577.01.T01:CDS 40.0%
!! TTGGTTGATTTTGTCGGAGA+GGG - Chr5:20779246-20779265 None:intergenic 40.0%
!!! ATGTTTTTAGGGATCCTAGG+TGG + Chr5:20779534-20779553 MsG0580025577.01.T01:CDS 40.0%
!!! CGAGTTAGTCTTCTTTTACC+TGG + Chr5:20782724-20782743 MsG0580025577.01.T01:CDS 40.0%
!!! GAGTTTTGTTTTTGGGGGAT+TGG + Chr5:20781190-20781209 MsG0580025577.01.T01:intron 40.0%
!!! TGTTTTTAGGGATCCTAGGT+GGG + Chr5:20779535-20779554 MsG0580025577.01.T01:CDS 40.0%
!!! TTTTGGAGTAATGTCGACAG+AGG - Chr5:20780890-20780909 None:intergenic 40.0%
AACTTATCAGCTTCGTCGGT+GGG + Chr5:20780276-20780295 MsG0580025577.01.T01:intron 45.0%
AAGAGAACGGTTAAATGCCG+CGG - Chr5:20779423-20779442 None:intergenic 45.0%
AAGATCCTCTGTCTCAAGTG+TGG - Chr5:20782701-20782720 None:intergenic 45.0%
AAGGGAGTTATAAGGTTGGC+TGG + Chr5:20780056-20780075 MsG0580025577.01.T01:intron 45.0%
AAGTGGGGATTTGAAGGGTA+AGG + Chr5:20781521-20781540 MsG0580025577.01.T01:intron 45.0%
ACAAGGTCCATCTGTTTACC+AGG - Chr5:20782745-20782764 None:intergenic 45.0%
ACCACGAGAAAAGGATCGTT+AGG - Chr5:20782270-20782289 None:intergenic 45.0%
ACCTCAAGATGTTTGCACAC+CGG + Chr5:20782022-20782041 MsG0580025577.01.T01:CDS 45.0%
ACGGTCACAAACGATGTTCT+TGG - Chr5:20780315-20780334 None:intergenic 45.0%
ACTACGAGTGAATTAGGTGG+CGG + Chr5:20782167-20782186 MsG0580025577.01.T01:CDS 45.0%
AGAAATGGGGAGAGTTCTCT+AGG + Chr5:20779738-20779757 MsG0580025577.01.T01:CDS 45.0%
AGAGGTTGTTCTTGTGGAGA+TGG - Chr5:20779207-20779226 None:intergenic 45.0%
AGAGTATATGGATTCGGGCA+TGG + Chr5:20783154-20783173 MsG0580025577.01.T01:CDS 45.0%
AGATACCACACTTGAGACAG+AGG + Chr5:20782693-20782712 MsG0580025577.01.T01:CDS 45.0%
AGGTTGTTCTTGTGGAGATG+GGG - Chr5:20779205-20779224 None:intergenic 45.0%
AGTGGGGATTTGAAGGGTAA+GGG + Chr5:20781522-20781541 MsG0580025577.01.T01:intron 45.0%
ATCATCAGTATGGCGTTCTG+CGG - Chr5:20780533-20780552 None:intergenic 45.0%
ATCTGCCATTGAACAAGGAC+TGG + Chr5:20781893-20781912 MsG0580025577.01.T01:CDS 45.0%
ATGCGCCTTGGACTGTTTAA+CGG + Chr5:20781966-20781985 MsG0580025577.01.T01:CDS 45.0%
ATGTCGACAGAGGTTTGACT+AGG - Chr5:20780880-20780899 None:intergenic 45.0%
ATTGGTAAGATGGGATGCCA+AGG - Chr5:20779298-20779317 None:intergenic 45.0%
CAATGTTCCCATGAACGACA+TGG + Chr5:20783069-20783088 MsG0580025577.01.T01:CDS 45.0%
CAGACCACCATTGGTAAGAT+GGG - Chr5:20779307-20779326 None:intergenic 45.0%
CATCCTTCTTATCCAAGGGA+AGG - Chr5:20782115-20782134 None:intergenic 45.0%
CATGTCGTTCATGGGAACAT+TGG - Chr5:20783071-20783090 None:intergenic 45.0%
CGACAATAAGTTCCTTCCCT+TGG + Chr5:20782100-20782119 MsG0580025577.01.T01:CDS 45.0%
CGGCATTTAACCGTTCTCTT+TGG + Chr5:20779423-20779442 MsG0580025577.01.T01:CDS 45.0%
CTTCACCAGTCCTTGTTCAA+TGG - Chr5:20781901-20781920 None:intergenic 45.0%
CTTCCCTTGGATAAGAAGGA+TGG + Chr5:20782113-20782132 MsG0580025577.01.T01:CDS 45.0%
GACACCATCCTTCTTATCCA+AGG - Chr5:20782120-20782139 None:intergenic 45.0%
GAGGTTGTTCTTGTGGAGAT+GGG - Chr5:20779206-20779225 None:intergenic 45.0%
GATCCATTGAAGTTGACACC+AGG - Chr5:20779359-20779378 None:intergenic 45.0%
GATCTCCGTTAAACAGTCCA+AGG - Chr5:20781974-20781993 None:intergenic 45.0%
GATGAGAGAGGTTGTTCTTG+TGG - Chr5:20779213-20779232 None:intergenic 45.0%
GCAACTACGAGTGAATTAGG+TGG + Chr5:20782164-20782183 MsG0580025577.01.T01:CDS 45.0%
GCATAAGCAGAACCAACCAT+AGG - Chr5:20779590-20779609 None:intergenic 45.0%
GCTTCTTCTCAAACCACCAT+TGG - Chr5:20783248-20783267 None:intergenic 45.0%
GGAGAGAGATGTTGCAGAAT+GGG - Chr5:20779184-20779203 None:intergenic 45.0%
GGTGTCTCCTTAGCTATCAT+TGG + Chr5:20782134-20782153 MsG0580025577.01.T01:CDS 45.0%
GTTCCTTCCCTTGGATAAGA+AGG + Chr5:20782109-20782128 MsG0580025577.01.T01:CDS 45.0%
GTTGGGGTGGTGAAGAATTT+AGG - Chr5:20779119-20779138 None:intergenic 45.0%
TAAAAACGGTAGGTCCTTCC+GGG - Chr5:20783124-20783143 None:intergenic 45.0%
TCAGACCACCATTGGTAAGA+TGG - Chr5:20779308-20779327 None:intergenic 45.0%
TGTCGACAGAGGTTTGACTA+GGG - Chr5:20780879-20780898 None:intergenic 45.0%
TTCAGCGAAGGAGACATCAA+GGG - Chr5:20782827-20782846 None:intergenic 45.0%
TTCTCTGTTCAAATGCGCCT+TGG + Chr5:20781954-20781973 MsG0580025577.01.T01:CDS 45.0%
TTGAGCATCTGTTTCAGCCT+AGG + Chr5:20780605-20780624 MsG0580025577.01.T01:intron 45.0%
TTGGCATCCCATCTTACCAA+TGG + Chr5:20779297-20779316 MsG0580025577.01.T01:CDS 45.0%
TTTCAGCGAAGGAGACATCA+AGG - Chr5:20782828-20782847 None:intergenic 45.0%
! AGGGAGTTATAAGGTTGGCT+GGG + Chr5:20780057-20780076 MsG0580025577.01.T01:intron 45.0%
! CATTGAACAAGGACTGGTGA+AGG + Chr5:20781899-20781918 MsG0580025577.01.T01:CDS 45.0%
! GAATTAGGTGGCGGTTATTC+AGG + Chr5:20782176-20782195 MsG0580025577.01.T01:CDS 45.0%
! GCAAAGCTGAAGTGTTCACA+AGG - Chr5:20783526-20783545 None:intergenic 45.0%
! TGATTTTGTCGGAGAGGGTT+AGG - Chr5:20779241-20779260 None:intergenic 45.0%
!! AGAGGGATTCAAGGTGTTGA+GGG + Chr5:20779623-20779642 MsG0580025577.01.T01:CDS 45.0%
!! ATAAGGTTGACTTGGTGGCT+GGG + Chr5:20780917-20780936 MsG0580025577.01.T01:intron 45.0%
!! ATGCTGTTGGTGTTGAAGGT+AGG + Chr5:20779459-20779478 MsG0580025577.01.T01:CDS 45.0%
!! CCAGCAGTTGATGACTACAT+CGG - Chr5:20780460-20780479 None:intergenic 45.0%
!! GACAAGCTGGGTTGAGTTTT+TGG + Chr5:20779498-20779517 MsG0580025577.01.T01:CDS 45.0%
!! GGACTGGTTAGAAACAAGTG+GGG + Chr5:20781506-20781525 MsG0580025577.01.T01:CDS 45.0%
!! GGGACTGGTTAGAAACAAGT+GGG + Chr5:20781505-20781524 MsG0580025577.01.T01:CDS 45.0%
!! GGTTATGCTGTTGGTGTTGA+AGG + Chr5:20779455-20779474 MsG0580025577.01.T01:CDS 45.0%
!! GTTGGTTGATTTTGTCGGAG+AGG - Chr5:20779247-20779266 None:intergenic 45.0%
!! GTTTTTAGGGATCCTAGGTG+GGG + Chr5:20779536-20779555 MsG0580025577.01.T01:CDS 45.0%
!! TAGAGGGATTCAAGGTGTTG+AGG + Chr5:20779622-20779641 MsG0580025577.01.T01:CDS 45.0%
!! TATAAGGTTGACTTGGTGGC+TGG + Chr5:20780916-20780935 MsG0580025577.01.T01:intron 45.0%
!! TGCTGTTGGTGTTGAAGGTA+GGG + Chr5:20779460-20779479 MsG0580025577.01.T01:CDS 45.0%
!! TGGGACTGGTTAGAAACAAG+TGG + Chr5:20781504-20781523 MsG0580025577.01.T01:CDS 45.0%
!! TTTTTAGGGATCCTAGGTGG+GGG + Chr5:20779537-20779556 MsG0580025577.01.T01:CDS 45.0%
!!! TAGCAAGGATCTTTTGGGAC+TGG + Chr5:20781490-20781509 MsG0580025577.01.T01:CDS 45.0%
!!! TTGTTTTTGGGGGATTGGCA+TGG + Chr5:20781195-20781214 MsG0580025577.01.T01:intron 45.0%
AATCCGACAAGCTGGGATTC+CGG - Chr5:20783448-20783467 None:intergenic 50.0%
ACGACTGAATCCGACAAGCT+GGG - Chr5:20783455-20783474 None:intergenic 50.0%
ACTTATCAGCTTCGTCGGTG+GGG + Chr5:20780277-20780296 MsG0580025577.01.T01:intron 50.0%
AGATCCTTGCTAGCACAAGC+AGG - Chr5:20781482-20781501 None:intergenic 50.0%
AGCACTTGAAGCTGCAAGAC+AGG + Chr5:20782058-20782077 MsG0580025577.01.T01:CDS 50.0%
ATCGTCGACAGACTGAGAGT+TGG - Chr5:20780355-20780374 None:intergenic 50.0%
ATTTGGGGGATCTCGGACAT+TGG - Chr5:20780633-20780652 None:intergenic 50.0%
CAACTTATCAGCTTCGTCGG+TGG + Chr5:20780275-20780294 MsG0580025577.01.T01:intron 50.0%
CACTTGAAGCTGCAAGACAG+GGG + Chr5:20782060-20782079 MsG0580025577.01.T01:CDS 50.0%
CAGAATGGGTAGTGAGAGTG+TGG - Chr5:20779170-20779189 None:intergenic 50.0%
CCGATGTAGTCATCAACTGC+TGG + Chr5:20780457-20780476 MsG0580025577.01.T01:intron 50.0%
CGCATTCCCATGTCGTTCAT+GGG - Chr5:20783079-20783098 None:intergenic 50.0%
CTCAAGTGTGGTATCTAGCC+CGG - Chr5:20782689-20782708 None:intergenic 50.0%
CTCCATGGCATTGCAACCAA+TGG + Chr5:20779332-20779351 MsG0580025577.01.T01:CDS 50.0%
CTTAGCAGCTTTCACTGCCT+CGG + Chr5:20780104-20780123 MsG0580025577.01.T01:intron 50.0%
GAAGTTGACACCAGGACCAT+TGG - Chr5:20779351-20779370 None:intergenic 50.0%
GACTCGGGATACCAAGTCAT+CGG - Chr5:20783043-20783062 None:intergenic 50.0%
GATCCTTCACGTGGTTATCC+CGG + Chr5:20783103-20783122 MsG0580025577.01.T01:CDS 50.0%
GCACTTGAAGCTGCAAGACA+GGG + Chr5:20782059-20782078 MsG0580025577.01.T01:CDS 50.0%
GCATCCCATCTTACCAATGG+TGG + Chr5:20779300-20779319 MsG0580025577.01.T01:CDS 50.0%
GGAGATGGAAGATGCGTTGT+TGG - Chr5:20779273-20779292 None:intergenic 50.0%
GGCGCATTTGAACAGAGAAC+AGG - Chr5:20781953-20781972 None:intergenic 50.0%
GGGAGAGAGATGTTGCAGAA+TGG - Chr5:20779185-20779204 None:intergenic 50.0%
GGGTGGTGAAGAATTTAGGG+AGG - Chr5:20779115-20779134 None:intergenic 50.0%
GGTTAGGAGAGAGATGAGAG+AGG - Chr5:20779225-20779244 None:intergenic 50.0%
GTAAGATGGGATGCCAAGGT+GGG - Chr5:20779294-20779313 None:intergenic 50.0%
TCAGCGAAGGAGACATCAAG+GGG - Chr5:20782826-20782845 None:intergenic 50.0%
TCCGGTGTGCAAACATCTTG+AGG - Chr5:20782026-20782045 None:intergenic 50.0%
TCGCATTCCCATGTCGTTCA+TGG - Chr5:20783080-20783099 None:intergenic 50.0%
TGAACACAACCACGAAACGG+TGG - Chr5:20781407-20781426 None:intergenic 50.0%
TGTTCCTGCTTGTGCTAGCA+AGG + Chr5:20781475-20781494 MsG0580025577.01.T01:CDS 50.0%
TTAGCAGCTTTCACTGCCTC+GGG + Chr5:20780105-20780124 MsG0580025577.01.T01:intron 50.0%
! AATGGGTAGTGAGAGTGTGG+TGG - Chr5:20779167-20779186 None:intergenic 50.0%
! ATCACGGCAACCAAAAGCGT+AGG - Chr5:20782590-20782609 None:intergenic 50.0%
! CTTTTCCACCAGCTTCACCA+GGG - Chr5:20782888-20782907 None:intergenic 50.0%
! GACCATTGGTTGCAATGCCA+TGG - Chr5:20779337-20779356 None:intergenic 50.0%
! GAGAGTGTGGTGGTTTGCAT+GGG - Chr5:20779157-20779176 None:intergenic 50.0%
! GCCTAACGATCCTTTTCTCG+TGG + Chr5:20782266-20782285 MsG0580025577.01.T01:intron 50.0%
! GGTCCTGGTGTCAACTTCAA+TGG + Chr5:20779353-20779372 MsG0580025577.01.T01:CDS 50.0%
! TGAACAAGGACTGGTGAAGG+AGG + Chr5:20781902-20781921 MsG0580025577.01.T01:CDS 50.0%
! TGAGAGTGTGGTGGTTTGCA+TGG - Chr5:20779158-20779177 None:intergenic 50.0%
!! TAAGGTTGACTTGGTGGCTG+GGG + Chr5:20780918-20780937 MsG0580025577.01.T01:intron 50.0%
AACTCCTGGGGAGGATCCTA+TGG + Chr5:20779571-20779590 MsG0580025577.01.T01:CDS 55.0%
ACTTACCAGCCACCGTTTCG+TGG + Chr5:20781395-20781414 MsG0580025577.01.T01:CDS 55.0%
AGAACGGTTAAATGCCGCGG+CGG - Chr5:20779420-20779439 None:intergenic 55.0%
ATGCGAGCTGATCCTTCACG+TGG + Chr5:20783094-20783113 MsG0580025577.01.T01:CDS 55.0%
CAGCAGCAACACGCGATACA+AGG - Chr5:20782762-20782781 None:intergenic 55.0%
CGGCGGAGACGATAACTTGA+GGG - Chr5:20779403-20779422 None:intergenic 55.0%
CTTATCAGCTTCGTCGGTGG+GGG + Chr5:20780278-20780297 MsG0580025577.01.T01:intron 55.0%
CTTCACGTGGTTATCCCGGA+AGG + Chr5:20783107-20783126 MsG0580025577.01.T01:CDS 55.0%
CTTCCGGGATAACCACGTGA+AGG - Chr5:20783109-20783128 None:intergenic 55.0%
GACGACTGAATCCGACAAGC+TGG - Chr5:20783456-20783475 None:intergenic 55.0%
GAGAGGACAGGAAACTCCTG+GGG + Chr5:20779559-20779578 MsG0580025577.01.T01:CDS 55.0%
GCATCTTCCATCTCCCACCT+TGG + Chr5:20779278-20779297 MsG0580025577.01.T01:CDS 55.0%
GGAGAGCTTCAGACCACCAT+TGG - Chr5:20779316-20779335 None:intergenic 55.0%
GGAGAGGACAGGAAACTCCT+GGG + Chr5:20779558-20779577 MsG0580025577.01.T01:CDS 55.0%
GGCATTGCAACCAATGGTCC+TGG + Chr5:20779338-20779357 MsG0580025577.01.T01:CDS 55.0%
GGCTGGGGTTGGAAAGCTTA+TGG + Chr5:20780933-20780952 MsG0580025577.01.T01:intron 55.0%
GGTAAGATGGGATGCCAAGG+TGG - Chr5:20779295-20779314 None:intergenic 55.0%
TCAAGTTATCGTCTCCGCCG+CGG + Chr5:20779403-20779422 MsG0580025577.01.T01:CDS 55.0%
TCACCGGAATCCCAGCTTGT+CGG + Chr5:20783442-20783461 MsG0580025577.01.T01:CDS 55.0%
TCTCAGTCTGTCGACGATGC+TGG + Chr5:20780357-20780376 MsG0580025577.01.T01:intron 55.0%
TGCATGGGTAGGAGGGAGAA+GGG - Chr5:20779142-20779161 None:intergenic 55.0%
TTCACTGCCTCGGGATGAGT+CGG + Chr5:20780114-20780133 MsG0580025577.01.T01:intron 55.0%
TTGCATGGGTAGGAGGGAGA+AGG - Chr5:20779143-20779162 None:intergenic 55.0%
! ATTCTTTGGGTGGGGTACCC+TGG + Chr5:20782868-20782887 MsG0580025577.01.T01:CDS 55.0%
! GCTTTTCCACCAGCTTCACC+AGG - Chr5:20782889-20782908 None:intergenic 55.0%
! GGTGGTTTGCATGGGTAGGA+GGG - Chr5:20779149-20779168 None:intergenic 55.0%
! GTGTGGTGGTTTGCATGGGT+AGG - Chr5:20779153-20779172 None:intergenic 55.0%
! GTTAAGACCGACTCATCCCG+AGG - Chr5:20780124-20780143 None:intergenic 55.0%
! TGGTGGTCTGAAGCTCTCCA+TGG + Chr5:20779317-20779336 MsG0580025577.01.T01:CDS 55.0%
! TGGTGGTTTGCATGGGTAGG+AGG - Chr5:20779150-20779169 None:intergenic 55.0%
!! GATCTCGGACATTGGCTCCT+AGG - Chr5:20780625-20780644 None:intergenic 55.0%
AGCCACGGCATCACAGTCTG+AGG - Chr5:20781655-20781674 None:intergenic 60.0%
AGGACAGGAAACTCCTGGGG+AGG + Chr5:20779562-20779581 MsG0580025577.01.T01:CDS 60.0%
CACAACCACGAAACGGTGGC+TGG - Chr5:20781403-20781422 None:intergenic 60.0%
CCAACCATAGGATCCTCCCC+AGG - Chr5:20779578-20779597 None:intergenic 60.0%
CCTGGGGAGGATCCTATGGT+TGG + Chr5:20779575-20779594 MsG0580025577.01.T01:CDS 60.0%
GCATGGGTAGGAGGGAGAAG+GGG - Chr5:20779141-20779160 None:intergenic 60.0%
GCGGCGGAGACGATAACTTG+AGG - Chr5:20779404-20779423 None:intergenic 60.0%
GGGAGAGGACAGGAAACTCC+TGG + Chr5:20779557-20779576 MsG0580025577.01.T01:CDS 60.0%
GGTAGGAGGGAGAAGGGGTT+GGG - Chr5:20779136-20779155 None:intergenic 60.0%
GTAGGAGGGAGAAGGGGTTG+GGG - Chr5:20779135-20779154 None:intergenic 60.0%
TGCCTCAGACTGTGATGCCG+TGG + Chr5:20781650-20781669 MsG0580025577.01.T01:CDS 60.0%
TGGGATGCCAAGGTGGGAGA+TGG - Chr5:20779288-20779307 None:intergenic 60.0%
!! GTTGACTTGGTGGCTGGGGT+TGG + Chr5:20780922-20780941 MsG0580025577.01.T01:intron 60.0%
AGGGATCCTAGGTGGGGGAG+AGG + Chr5:20779542-20779561 MsG0580025577.01.T01:CDS 65.0%
GGGTACCCTGGTGAAGCTGG+TGG + Chr5:20782880-20782899 MsG0580025577.01.T01:CDS 65.0%
GGGTAGGAGGGAGAAGGGGT+TGG - Chr5:20779137-20779156 None:intergenic 65.0%
TCCTAGGTGGGGGAGAGGAC+AGG + Chr5:20779547-20779566 MsG0580025577.01.T01:CDS 65.0%
TCCTGTCCTCTCCCCCACCT+AGG - Chr5:20779551-20779570 None:intergenic 65.0%
! GTGGGGTACCCTGGTGAAGC+TGG + Chr5:20782877-20782896 MsG0580025577.01.T01:CDS 65.0%
GGAGGGAGAAGGGGTTGGGG+TGG - Chr5:20779132-20779151 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr5 gene 20779033 20783756 20779033 ID=MsG0580025577.01;Name=MsG0580025577.01
Chr5 mRNA 20779033 20783756 20779033 ID=MsG0580025577.01.T01;Parent=MsG0580025577.01;Name=MsG0580025577.01.T01;_AED=0.25;_eAED=0.25;_QI=14|1|1|1|1|1|6|120|789
Chr5 exon 20779033 20779778 20779033 ID=MsG0580025577.01.T01:exon:23344;Parent=MsG0580025577.01.T01
Chr5 exon 20781371 20781537 20781371 ID=MsG0580025577.01.T01:exon:23345;Parent=MsG0580025577.01.T01
Chr5 exon 20781644 20781741 20781644 ID=MsG0580025577.01.T01:exon:23346;Parent=MsG0580025577.01.T01
Chr5 exon 20781850 20782197 20781850 ID=MsG0580025577.01.T01:exon:23347;Parent=MsG0580025577.01.T01
Chr5 exon 20782527 20782943 20782527 ID=MsG0580025577.01.T01:exon:23348;Parent=MsG0580025577.01.T01
Chr5 exon 20783029 20783756 20783029 ID=MsG0580025577.01.T01:exon:23349;Parent=MsG0580025577.01.T01
Chr5 five_prime_UTR 20779033 20779046 20779033 ID=MsG0580025577.01.T01:five_prime_utr;Parent=MsG0580025577.01.T01
Chr5 CDS 20779047 20779778 20779047 ID=MsG0580025577.01.T01:cds;Parent=MsG0580025577.01.T01
Chr5 CDS 20781371 20781537 20781371 ID=MsG0580025577.01.T01:cds;Parent=MsG0580025577.01.T01
Chr5 CDS 20781644 20781741 20781644 ID=MsG0580025577.01.T01:cds;Parent=MsG0580025577.01.T01
Chr5 CDS 20781850 20782197 20781850 ID=MsG0580025577.01.T01:cds;Parent=MsG0580025577.01.T01
Chr5 CDS 20782527 20782943 20782527 ID=MsG0580025577.01.T01:cds;Parent=MsG0580025577.01.T01
Chr5 CDS 20783029 20783636 20783029 ID=MsG0580025577.01.T01:cds;Parent=MsG0580025577.01.T01
Chr5 three_prime_UTR 20783637 20783756 20783637 ID=MsG0580025577.01.T01:three_prime_utr;Parent=MsG0580025577.01.T01
Gene Sequence

>MsG0580025577.01.T01

ATGATGTTTCACCAACAAAGATTCACCATCATCATCATCTTCTTGTTTTCACTATTACTAATACACCTCCCTAAATTCTTCACCACCCCAACCCCTTCTCCCTCCTACCCATGCAAACCACCACACTCTCACTACCCATTCTGCAACATCTCTCTCCCCATCTCCACAAGAACAACCTCTCTCATCTCTCTCCTAACCCTCTCCGACAAAATCAACCAACTTTCCAACAACGCATCTTCCATCTCCCACCTTGGCATCCCATCTTACCAATGGTGGTCTGAAGCTCTCCATGGCATTGCAACCAATGGTCCTGGTGTCAACTTCAATGGATCAGTTAAATCGGCTACAAGTTTCCCTCAAGTTATCGTCTCCGCCGCGGCATTTAACCGTTCTCTTTGGTTTCTTATTGGTTATGCTGTTGGTGTTGAAGGTAGGGCTATGTTTAATGTTGGACAAGCTGGGTTGAGTTTTTGGGCTCCGAATGTTAATGTTTTTAGGGATCCTAGGTGGGGGAGAGGACAGGAAACTCCTGGGGAGGATCCTATGGTTGGTTCTGCTTATGCTGTTGAGTTTGTTAGAGGGATTCAAGGTGTTGAGGGAATCAAGAATGTGTTGAATGATCATGATAGTGATGATGATGATGGTCTTATGGTGTCTGCTTGTTGTAAACATTTTACTGCTTATGATTTGGAGAAATGGGGAGAGTTCTCTAGGTATAATTTCAATGCTGTGGTTACACAACAGGATTTGGAAGACACTTACCAGCCACCGTTTCGTGGTTGTGTTCAACAAGGGAAAGCGAGCTGCTTGATGTGTTCTTACAATGAAGTTAATGGTGTTCCTGCTTGTGCTAGCAAGGATCTTTTGGGACTGGTTAGAAACAAGTGGGGATTTGAAGGGTATATTGCCTCAGACTGTGATGCCGTGGCTACTGTTTACGAGTATCAAAAGTATGCAAAATCTGCAGAAGATGCTGTTGCTGATGTTCTTAAAGCAGGTATGGATATTAATTGTGGAACGTTTATGCTTCGACACACTGAATCTGCCATTGAACAAGGACTGGTGAAGGAGGAAGATTTAGATAGAGCTCTTTTCAACCTGTTCTCTGTTCAAATGCGCCTTGGACTGTTTAACGGAGATCCGAAAAAAGGCAAGTTTGGCAAATTGGGACCTCAAGATGTTTGCACACCGGAACACAAAAAATTAGCACTTGAAGCTGCAAGACAGGGGATCGTACTTCTGAAGAACGACAATAAGTTCCTTCCCTTGGATAAGAAGGATGGTGTCTCCTTAGCTATCATTGGTCCAATGGCAACTACGAGTGAATTAGGTGGCGGTTATTCAGGAATTTCTTGCTCTCCAAGAAGCTTATATGATGGACTTAAACAATATGCAAAGACGATATCCTACGCTTTTGGTTGCCGTGATGTAAAATGTGACTCTGATGACGGTTTCGCCGAAGCTATTGACATCGCAAAGCAAACTGATTTTGTTGTAATAGTTGCCGGGCTAGATACCACACTTGAGACAGAGGATCTTGATCGAGTTAGTCTTCTTTTACCTGGTAAACAGATGGACCTTGTATCGCGTGTTGCTGCTGCTAGTAGAAGACCAGTTATTCTAGTTCTTACTGGTGGAGGACCCCTTGATGTCTCCTTCGCTGAAAATAATCAACTAATCACAAGTATTCTTTGGGTGGGGTACCCTGGTGAAGCTGGTGGAAAAGCACTAGCTGAAATCATCTTTGGAGAGTTCAATCCAGCTGGAAGGCTTCCGATGACTTGGTATCCCGAGTCATTTACCAATGTTCCCATGAACGACATGGGAATGCGAGCTGATCCTTCACGTGGTTATCCCGGAAGGACCTACCGTTTTTATACTGGAAGTAGAGTATATGGATTCGGGCATGGCTTAAGTTACAGTGATTTCTCATACAGGGTTTTATCAGCTCCAAGTAAACTTAGTTTGTCTACAACAACCAATGGTGGTTTGAGAAGAAGCTTATTGAACAAGGTAGAGAAAGAGGTGTTCGAAGTTGATCATGTTCACGTTGATGAGTTGCGAAATTGCAACTCATTGAGCTTCTCAATGCATATTTCTGTGATGAACGTTGGAGATTTAGATGGAAGTCACGTGGTGATGTTGTTCTCTAAATGGCCTAAAAATATACGAGGTTCACCGGAATCCCAGCTTGTCGGATTCAGTCGTCTGCATACAGTTTCTAACAAATCTATTGAAACAAGCATTTTGGTGGATCCTTGTGAACACTTCAGCTTTGCAGATGAACAAGGAAAAAGGATATTGCCCTTAGGCAGTCATATTTTGAACGTAGGGGATGTTGAACACATTCTTTCTATTGAAATTTATTGA
Protein sequence

>MsG0580025577.01.T01

MMFHQQRFTIIIIFLFSLLLIHLPKFFTTPTPSPSYPCKPPHSHYPFCNISLPISTRTTSLISLLTLSDKINQLSNNASSISHLGIPSYQWWSEALHGIATNGPGVNFNGSVKSATSFPQVIVSAAAFNRSLWFLIGYAVGVEGRAMFNVGQAGLSFWAPNVNVFRDPRWGRGQETPGEDPMVGSAYAVEFVRGIQGVEGIKNVLNDHDSDDDDGLMVSACCKHFTAYDLEKWGEFSRYNFNAVVTQQDLEDTYQPPFRGCVQQGKASCLMCSYNEVNGVPACASKDLLGLVRNKWGFEGYIASDCDAVATVYEYQKYAKSAEDAVADVLKAGMDINCGTFMLRHTESAIEQGLVKEEDLDRALFNLFSVQMRLGLFNGDPKKGKFGKLGPQDVCTPEHKKLALEAARQGIVLLKNDNKFLPLDKKDGVSLAIIGPMATTSELGGGYSGISCSPRSLYDGLKQYAKTISYAFGCRDVKCDSDDGFAEAIDIAKQTDFVVIVAGLDTTLETEDLDRVSLLLPGKQMDLVSRVAAASRRPVILVLTGGGPLDVSFAENNQLITSILWVGYPGEAGGKALAEIIFGEFNPAGRLPMTWYPESFTNVPMNDMGMRADPSRGYPGRTYRFYTGSRVYGFGHGLSYSDFSYRVLSAPSKLSLSTTTNGGLRRSLLNKVEKEVFEVDHVHVDELRNCNSLSFSMHISVMNVGDLDGSHVVMLFSKWPKNIRGSPESQLVGFSRLHTVSNKSIETSILVDPCEHFSFADEQGKRILPLGSHILNVGDVEHILSIEIY*