AlfalfaGEDB | MsG0580026097.01

M. sativa cultivar ZhongmuNo.1 / MsG0580026097.01

KEGG: -
GO: -
PFAM: PF03195

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580026097.01.T01	XP_013451538.1	87.264	212	17	2	1	202	1	212	2.89E-116	340

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580026097.01.T01	Q9SRV3	70.833	144	38	1	38	177	50	193	5.96E-65	204

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580026097.01.T01	A0A072U858	87.264	212	17	2	1	202	1	212	1.38e-116	340

TFs/TRs:

Gene ID	Type	Classification
MsG0580026097.01.T01	TF	LOB

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0580026097.01	MsG0580026099.01	0.851311	9.642126e-61	1.943818e-57

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580026097.01.T01	MTR_6g027710	87.264	212	17	2	1	202	1	212	3.50e-120	340
MsG0580026097.01.T01	MTR_6g027700	56.477	193	56	5	36	202	4	194	1.02e-63	196
MsG0580026097.01.T01	MTR_7g096530	68.932	103	32	0	38	140	13	115	3.16e-48	157
MsG0580026097.01.T01	MTR_1g070205	61.017	118	44	1	39	156	12	127	9.50e-48	156
MsG0580026097.01.T01	MTR_7g096610	68.627	102	32	0	38	139	7	108	2.48e-47	155
MsG0580026097.01.T01	MTR_8g036085	68.627	102	32	0	39	140	23	124	2.62e-47	155
MsG0580026097.01.T01	MTR_1g070220	66.337	101	34	0	39	139	15	115	9.37e-47	153
MsG0580026097.01.T01	MTR_8g036105	60.504	119	46	1	39	156	18	136	2.70e-45	149
MsG0580026097.01.T01	MTR_5g080470	54.622	119	54	0	38	156	6	124	4.48e-45	148
MsG0580026097.01.T01	MTR_7g074990	62.745	102	38	0	39	140	20	121	1.38e-44	148
MsG0580026097.01.T01	MTR_7g075230	51.034	145	58	4	39	181	12	145	9.01e-40	135
MsG0580026097.01.T01	MTR_4g083680	42.105	152	78	3	38	183	14	161	4.66e-37	127
MsG0580026097.01.T01	MTR_4g105170	54.128	109	49	1	38	146	10	117	1.97e-36	126
MsG0580026097.01.T01	MTR_3g071590	43.972	141	70	2	38	170	7	146	4.43e-36	124
MsG0580026097.01.T01	MTR_3g031660	51.923	104	49	1	38	141	6	108	1.72e-35	123
MsG0580026097.01.T01	MTR_7g033800	54.808	104	46	1	38	141	10	112	2.51e-35	122
MsG0580026097.01.T01	MTR_6g005070	50.862	116	54	2	38	153	8	120	2.60e-35	122
MsG0580026097.01.T01	MTR_5g083960	42.282	149	85	1	1	149	1	148	2.81e-35	123
MsG0580026097.01.T01	MTR_3g077240	53.636	110	48	2	38	147	9	115	4.66e-35	122
MsG0580026097.01.T01	MTR_2g068760	45.378	119	64	1	27	145	1	118	8.59e-35	121
MsG0580026097.01.T01	MTR_3g094690	51.786	112	53	1	37	148	45	155	1.51e-34	122
MsG0580026097.01.T01	MTR_5g083010	52.427	103	48	1	38	140	10	111	1.54e-34	120
MsG0580026097.01.T01	MTR_2g093310	41.497	147	74	4	36	171	30	175	1.68e-34	121
MsG0580026097.01.T01	MTR_4g060950	39.264	163	90	4	36	191	21	181	3.85e-34	120
MsG0580026097.01.T01	MTR_5g083230	47.059	119	60	2	38	156	5	120	7.95e-34	119
MsG0580026097.01.T01	MTR_5g017950	54.369	103	46	1	38	140	7	108	4.71e-33	120
MsG0580026097.01.T01	MTR_6g005080	48.276	116	57	2	38	153	9	121	5.22e-33	115
MsG0580026097.01.T01	MTR_3g094690	51.786	112	52	2	37	148	45	154	9.68e-33	118
MsG0580026097.01.T01	MTR_3g073690	52.427	103	48	1	38	140	8	109	2.12e-32	116
MsG0580026097.01.T01	MTR_3g071420	50.000	98	48	1	38	135	13	109	1.30e-31	113
MsG0580026097.01.T01	MTR_3g452660	47.009	117	58	2	38	154	6	118	1.16e-30	114
MsG0580026097.01.T01	MTR_5g075020	53.704	108	49	1	37	144	41	147	4.34e-30	110
MsG0580026097.01.T01	MTR_5g075020	53.704	108	49	1	37	144	45	151	6.85e-30	110
MsG0580026097.01.T01	MTR_1g095850	45.217	115	60	2	40	153	73	185	4.87e-29	108
MsG0580026097.01.T01	MTR_5g093010	45.455	110	59	1	36	145	2	110	1.51e-28	104
MsG0580026097.01.T01	MTR_7g028905	43.636	110	61	1	36	145	2	110	1.79e-28	103
MsG0580026097.01.T01	MTR_8g040900	58.537	82	33	1	38	119	6	86	6.53e-28	105
MsG0580026097.01.T01	MTR_8g079660	45.714	105	56	1	36	140	5	108	2.11e-26	102
MsG0580026097.01.T01	MTR_8g079620	39.815	108	64	1	33	140	2	108	6.62e-23	92.4
MsG0580026097.01.T01	MTR_8g079580	36.641	131	77	3	34	163	3	128	5.86e-21	87.0
MsG0580026097.01.T01	MTR_2g100020	38.614	101	61	1	40	140	20	119	2.68e-20	86.3
MsG0580026097.01.T01	MTR_4g107450	41.584	101	58	1	40	140	11	110	5.06e-20	85.9
MsG0580026097.01.T01	MTR_8g017090	38.614	101	61	1	40	140	13	112	7.83e-19	82.8
MsG0580026097.01.T01	MTR_6g011250	45.679	81	42	2	40	119	10	89	4.50e-18	78.6
MsG0580026097.01.T01	MTR_6g011230	36.634	101	63	1	40	140	12	111	6.39e-18	78.6
MsG0580026097.01.T01	MTR_6g011200	33.945	109	67	3	36	140	3	110	3.41e-16	74.7
MsG0580026097.01.T01	MTR_4g099230	41.975	81	45	2	40	119	3	82	4.48e-15	69.7
MsG0580026097.01.T01	MTR_5g085390	34.862	109	66	3	36	140	3	110	1.66e-13	67.4
MsG0580026097.01.T01	MTR_4g088035	30.682	88	60	1	40	127	7	93	8.34e-11	60.1

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580026097.01.T01	AT3G03760	70.833	144	38	1	38	177	50	193	6.08e-66	204
MsG0580026097.01.T01	AT2G42430	55.263	152	49	2	38	170	14	165	3.84e-50	163
MsG0580026097.01.T01	AT3G58190	61.864	118	44	1	39	156	11	127	2.17e-48	157
MsG0580026097.01.T01	AT5G06080	49.306	144	64	1	38	181	6	140	9.82e-46	149
MsG0580026097.01.T01	AT2G42440	52.593	135	61	1	38	172	6	137	1.75e-44	148
MsG0580026097.01.T01	AT4G00220	64.423	104	37	0	42	145	20	123	2.29e-44	147
MsG0580026097.01.T01	AT2G45420	65.385	104	36	0	42	145	40	143	2.36e-44	149
MsG0580026097.01.T01	AT2G31310	59.804	102	41	0	38	139	6	107	9.38e-44	145
MsG0580026097.01.T01	AT4G00210	62.745	102	38	0	39	140	11	112	1.20e-42	143
MsG0580026097.01.T01	AT2G45410	50.000	140	61	3	42	179	19	151	1.34e-39	134
MsG0580026097.01.T01	AT3G27650	55.769	104	45	1	38	141	38	140	2.48e-36	125
MsG0580026097.01.T01	AT2G30130	48.760	121	59	2	38	158	7	124	8.79e-35	122
MsG0580026097.01.T01	AT5G63090	52.294	109	51	1	38	146	10	117	3.99e-34	120
MsG0580026097.01.T01	AT5G63090	52.294	109	51	1	38	146	10	117	3.99e-34	120
MsG0580026097.01.T01	AT5G63090	52.294	109	51	1	38	146	10	117	3.99e-34	120
MsG0580026097.01.T01	AT5G63090	52.294	109	51	1	38	146	10	117	3.99e-34	120
MsG0580026097.01.T01	AT1G07900	45.378	119	62	2	36	153	30	146	7.54e-34	119
MsG0580026097.01.T01	AT1G16530	49.541	109	53	2	37	144	12	119	1.08e-33	118
MsG0580026097.01.T01	AT2G30340	47.863	117	58	2	37	153	51	164	2.89e-33	120
MsG0580026097.01.T01	AT2G30340	47.863	117	58	2	37	153	50	163	3.11e-33	120
MsG0580026097.01.T01	AT5G66870	45.070	142	73	2	38	179	6	142	5.94e-33	120
MsG0580026097.01.T01	AT3G11090	49.038	104	52	1	38	141	10	112	7.36e-33	116
MsG0580026097.01.T01	AT2G28500	47.748	111	55	2	36	145	52	160	1.35e-32	117
MsG0580026097.01.T01	AT1G31320	46.218	119	63	1	27	145	1	118	5.07e-32	114
MsG0580026097.01.T01	AT2G23660	46.154	104	55	1	38	141	4	106	1.40e-29	111
MsG0580026097.01.T01	AT2G23660	46.154	104	55	1	38	141	4	106	1.40e-29	111
MsG0580026097.01.T01	AT2G23660	46.154	104	55	1	38	141	4	106	1.40e-29	111
MsG0580026097.01.T01	AT1G65620	54.369	103	46	1	38	140	8	109	2.96e-29	108
MsG0580026097.01.T01	AT1G65620	54.369	103	46	1	38	140	8	109	2.96e-29	108
MsG0580026097.01.T01	AT1G65620	54.369	103	46	1	38	140	8	109	2.96e-29	108
MsG0580026097.01.T01	AT1G65620	54.369	103	46	1	38	140	8	109	2.96e-29	108
MsG0580026097.01.T01	AT1G65620	54.369	103	46	1	38	140	8	109	2.96e-29	108
MsG0580026097.01.T01	AT3G26660	45.370	108	51	2	40	140	6	112	3.12e-29	105
MsG0580026097.01.T01	AT3G26620	45.370	108	51	2	40	140	6	112	4.91e-29	105
MsG0580026097.01.T01	AT2G40470	52.500	120	55	2	37	156	18	135	6.68e-29	107
MsG0580026097.01.T01	AT2G40470	51.282	117	56	1	37	153	43	158	7.99e-29	107
MsG0580026097.01.T01	AT3G50510	39.450	109	65	1	32	140	5	112	1.18e-23	93.6
MsG0580026097.01.T01	AT3G50510	39.450	109	65	1	32	140	5	112	1.18e-23	93.6
MsG0580026097.01.T01	AT3G13850	32.298	161	103	2	40	200	37	191	4.89e-20	85.5
MsG0580026097.01.T01	AT1G72980	38.835	103	62	1	38	140	12	113	1.03e-19	83.6
MsG0580026097.01.T01	AT5G35900	33.663	101	66	1	40	140	6	105	3.67e-16	73.9
MsG0580026097.01.T01	AT3G47870	32.673	101	67	1	40	140	37	136	5.33e-15	72.4
MsG0580026097.01.T01	AT1G06280	42.667	75	42	1	40	114	25	98	1.41e-14	69.7
MsG0580026097.01.T01	AT4G22700	32.292	96	62	2	40	134	6	99	1.59e-12	63.9

Find 55 sgRNAs with CRISPR-Local

Find 60 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AATTGAAACGGCGGCTGATA+TGG	0.240934	5:-30742582	None:intergenic
AGGCTAGCTGATCCGGTTTA+TGG	0.264632	5:+30742322	MsG0580026097.01.T01:CDS
AACAACTTCAACCCTGGTTT+TGG	0.268597	5:+30742663	MsG0580026097.01.T01:CDS
CATTCTTGCTTTGCAGCAAC+AGG	0.339538	5:+30742357	MsG0580026097.01.T01:CDS
GGTGGTGATGGTAGTAGTTC+GGG	0.392136	5:+30742019	MsG0580026097.01.T01:CDS
TGCATCTTTGCACCCTACTT+TGG	0.399115	5:+30742163	MsG0580026097.01.T01:CDS
TGAAGTTGTTCATGTTCATA+AGG	0.399289	5:-30742650	None:intergenic
TAGCCTAGCTTGAGCCTCAT+AGG	0.409914	5:-30742305	None:intergenic
ATGGTAGTAGTTCGGGAAAC+AGG	0.414773	5:+30742026	MsG0580026097.01.T01:CDS
ATTGAAACGGCGGCTGATAT+GGG	0.422968	5:-30742581	None:intergenic
GCGGCTGTGCACAAGGTGTT+TGG	0.424834	5:+30742211	MsG0580026097.01.T01:CDS
AAATAGTCGCCGCAGCTTCA+TGG	0.427210	5:-30742282	None:intergenic
AAACTCAATTGATGAATAAG+AGG	0.436075	5:+30742526	MsG0580026097.01.T01:CDS
AGGTGGTGATGGTAGTAGTT+CGG	0.439949	5:+30742018	MsG0580026097.01.T01:CDS
TCAAGCTAGGCTAGCTGATC+CGG	0.442761	5:+30742315	MsG0580026097.01.T01:CDS
GTTGTTCATGTTCATAAGGT+TGG	0.485083	5:-30742646	None:intergenic
TTGAGGAGGAAGTGTAGTAG+TGG	0.488789	5:+30742139	MsG0580026097.01.T01:CDS
GGCTACAAGCTCTGTGATGA+AGG	0.492816	5:-30742705	None:intergenic
AGCTTCATGGCGATGGTTAG+CGG	0.494931	5:-30742269	None:intergenic
GCACCACACGGAGATATAAT+CGG	0.498285	5:-30742106	None:intergenic
GCTTCATGGCGATGGTTAGC+GGG	0.503593	5:-30742268	None:intergenic
GTGGACACACAACCATAAAC+CGG	0.504022	5:-30742334	None:intergenic
TCCATTGTGAGGCCAAAACC+AGG	0.513069	5:-30742675	None:intergenic
GGTGGAAGCAGATGAGTTGT+TGG	0.513070	5:-30742622	None:intergenic
AACATGAACAACTTCAACCC+TGG	0.523993	5:+30742657	MsG0580026097.01.T01:CDS
CTGTTGCTGCAAAGCAAGAA+TGG	0.532688	5:-30742356	None:intergenic
AAATGCTGCAAAGCGTGCAA+TGG	0.533586	5:+30742063	MsG0580026097.01.T01:CDS
CCAAGGTGCAGCTAAGTTTG+CGG	0.534415	5:+30742192	MsG0580026097.01.T01:CDS
GTTCATGTTCATAAGGTTGG+TGG	0.542354	5:-30742643	None:intergenic
ACCTTGGTCAGTACCAAAGT+AGG	0.564783	5:-30742176	None:intergenic
TCGCCGCAGCTTCATGGCGA+TGG	0.568449	5:-30742276	None:intergenic
GCTGGCTGCACAAATTGAAA+CGG	0.572987	5:-30742594	None:intergenic
CATGTTCATAAGGTTGGTGG+TGG	0.580499	5:-30742640	None:intergenic
TAAGTTTGCGGCTGTGCACA+AGG	0.581391	5:+30742204	MsG0580026097.01.T01:CDS
GCTGAGTCACAAGGTGGTGA+TGG	0.582631	5:+30742007	MsG0580026097.01.T01:CDS
TTTCCTATGAGGCTCAAGCT+AGG	0.592261	5:+30742302	MsG0580026097.01.T01:CDS
CCTTGGTCAGTACCAAAGTA+GGG	0.597516	5:-30742175	None:intergenic
TGCGGCGACTATTTCCTATG+AGG	0.598387	5:+30742291	MsG0580026097.01.T01:CDS
CCGCAAACTTAGCTGCACCT+TGG	0.601831	5:-30742192	None:intergenic
TTGAAACGGCGGCTGATATG+GGG	0.604833	5:-30742580	None:intergenic
GATGAGTTGTTGGAATATGC+TGG	0.605347	5:-30742612	None:intergenic
GCGATGGTTAGCGGGAACGT+TGG	0.611754	5:-30742260	None:intergenic
CCCTACTTTGGTACTGACCA+AGG	0.613176	5:+30742175	MsG0580026097.01.T01:CDS
TAACCATCGCCATGAAGCTG+CGG	0.616919	5:+30742273	MsG0580026097.01.T01:CDS
GTGGTGCTTGCAAGTTCTTG+AGG	0.646814	5:+30742122	MsG0580026097.01.T01:CDS
GGCTGCACAAATTGAAACGG+CGG	0.671846	5:-30742591	None:intergenic
GGTGGCAGCTATGCAAGCAG+AGG	0.672106	5:+30742491	MsG0580026097.01.T01:intron
TCTGTGATGGCTGAGTCACA+AGG	0.673947	5:+30741998	None:intergenic
GTGCTTGCAAGTTCTTGAGG+AGG	0.680170	5:+30742125	MsG0580026097.01.T01:CDS
AAGAACTTGCAAGCACCACA+CGG	0.685626	5:-30742118	None:intergenic
CCATTGTGAGGCCAAAACCA+GGG	0.697828	5:-30742674	None:intergenic
AAGGTGTTGTCTCCATTGTG+AGG	0.699953	5:-30742686	None:intergenic
TTGCTGCAAAGCAAGAATGG+TGG	0.702855	5:-30742353	None:intergenic
GAACCGATTATATCTCCGTG+TGG	0.743633	5:+30742103	MsG0580026097.01.T01:CDS
GTGATGGCTGAGTCACAAGG+TGG	0.752882	5:+30742001	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TTCTGCAAATGATTTATTAA+AGG	-	Chr5:30742430-30742449	None:intergenic	20.0%
!!!	AATCATTTGCAGAATATTTT+CGG	+	Chr5:30742436-30742455	MsG0580026097.01.T01:intron	20.0%
!	AAACTCAATTGATGAATAAG+AGG	+	Chr5:30742526-30742545	MsG0580026097.01.T01:CDS	25.0%
!	AAGATGAATAACTTACCTTA+TGG	+	Chr5:30742460-30742479	MsG0580026097.01.T01:intron	25.0%
	TGAAGTTGTTCATGTTCATA+AGG	-	Chr5:30742653-30742672	None:intergenic	30.0%
	GTTGTTCATGTTCATAAGGT+TGG	-	Chr5:30742649-30742668	None:intergenic	35.0%
	AACATGAACAACTTCAACCC+TGG	+	Chr5:30742657-30742676	MsG0580026097.01.T01:CDS	40.0%
	GATGAGTTGTTGGAATATGC+TGG	-	Chr5:30742615-30742634	None:intergenic	40.0%
	GTTCATGTTCATAAGGTTGG+TGG	-	Chr5:30742646-30742665	None:intergenic	40.0%
!	AACAACTTCAACCCTGGTTT+TGG	+	Chr5:30742663-30742682	MsG0580026097.01.T01:CDS	40.0%
!	ACTTACCTTATGGCTGATTC+AGG	+	Chr5:30742470-30742489	MsG0580026097.01.T01:intron	40.0%
	AAATGCTGCAAAGCGTGCAA+TGG	+	Chr5:30742063-30742082	MsG0580026097.01.T01:CDS	45.0%
	AAGAACTTGCAAGCACCACA+CGG	-	Chr5:30742121-30742140	None:intergenic	45.0%
	AATTGAAACGGCGGCTGATA+TGG	-	Chr5:30742585-30742604	None:intergenic	45.0%
	ACCTTGGTCAGTACCAAAGT+AGG	-	Chr5:30742179-30742198	None:intergenic	45.0%
	ATGGTAGTAGTTCGGGAAAC+AGG	+	Chr5:30742026-30742045	MsG0580026097.01.T01:CDS	45.0%
	ATTGAAACGGCGGCTGATAT+GGG	-	Chr5:30742584-30742603	None:intergenic	45.0%
	CATTCTTGCTTTGCAGCAAC+AGG	+	Chr5:30742357-30742376	MsG0580026097.01.T01:CDS	45.0%
	CCTTGGTCAGTACCAAAGTA+GGG	-	Chr5:30742178-30742197	None:intergenic	45.0%
	CTGTTGCTGCAAAGCAAGAA+TGG	-	Chr5:30742359-30742378	None:intergenic	45.0%
	GAACCGATTATATCTCCGTG+TGG	+	Chr5:30742103-30742122	MsG0580026097.01.T01:CDS	45.0%
	GCACCACACGGAGATATAAT+CGG	-	Chr5:30742109-30742128	None:intergenic	45.0%
	GCTGGCTGCACAAATTGAAA+CGG	-	Chr5:30742597-30742616	None:intergenic	45.0%
	GTGGACACACAACCATAAAC+CGG	-	Chr5:30742337-30742356	None:intergenic	45.0%
	TGCATCTTTGCACCCTACTT+TGG	+	Chr5:30742163-30742182	MsG0580026097.01.T01:CDS	45.0%
	TTGCTGCAAAGCAAGAATGG+TGG	-	Chr5:30742356-30742375	None:intergenic	45.0%
	TTTCCTATGAGGCTCAAGCT+AGG	+	Chr5:30742302-30742321	MsG0580026097.01.T01:CDS	45.0%
!	TACCTTATGGCTGATTCAGG+TGG	+	Chr5:30742473-30742492	MsG0580026097.01.T01:intron	45.0%
!	TTGAGGAGGAAGTGTAGTAG+TGG	+	Chr5:30742139-30742158	MsG0580026097.01.T01:CDS	45.0%
!!	AAGGTGTTGTCTCCATTGTG+AGG	-	Chr5:30742689-30742708	None:intergenic	45.0%
!!	AGGTGGTGATGGTAGTAGTT+CGG	+	Chr5:30742018-30742037	MsG0580026097.01.T01:CDS	45.0%
!!	CATGTTCATAAGGTTGGTGG+TGG	-	Chr5:30742643-30742662	None:intergenic	45.0%
	AAATAGTCGCCGCAGCTTCA+TGG	-	Chr5:30742285-30742304	None:intergenic	50.0%
	AGCTTCATGGCGATGGTTAG+CGG	-	Chr5:30742272-30742291	None:intergenic	50.0%
	CCAAGGTGCAGCTAAGTTTG+CGG	+	Chr5:30742192-30742211	MsG0580026097.01.T01:CDS	50.0%
	CCATTGTGAGGCCAAAACCA+GGG	-	Chr5:30742677-30742696	None:intergenic	50.0%
	GGCTGCACAAATTGAAACGG+CGG	-	Chr5:30742594-30742613	None:intergenic	50.0%
	GGTGGAAGCAGATGAGTTGT+TGG	-	Chr5:30742625-30742644	None:intergenic	50.0%
	GTGCTTGCAAGTTCTTGAGG+AGG	+	Chr5:30742125-30742144	MsG0580026097.01.T01:CDS	50.0%
	GTGGTGCTTGCAAGTTCTTG+AGG	+	Chr5:30742122-30742141	MsG0580026097.01.T01:CDS	50.0%
	TAACCATCGCCATGAAGCTG+CGG	+	Chr5:30742273-30742292	MsG0580026097.01.T01:CDS	50.0%
	TAAGTTTGCGGCTGTGCACA+AGG	+	Chr5:30742204-30742223	MsG0580026097.01.T01:CDS	50.0%
	TAGCCTAGCTTGAGCCTCAT+AGG	-	Chr5:30742308-30742327	None:intergenic	50.0%
	TCCATTGTGAGGCCAAAACC+AGG	-	Chr5:30742678-30742697	None:intergenic	50.0%
	TCTTGCTTTGCAGCAACAGG+TGG	+	Chr5:30742360-30742379	MsG0580026097.01.T01:intron	50.0%
	TGCCACCTGAATCAGCCATA+AGG	-	Chr5:30742478-30742497	None:intergenic	50.0%
	TGCGGCGACTATTTCCTATG+AGG	+	Chr5:30742291-30742310	MsG0580026097.01.T01:CDS	50.0%
	TTGAAACGGCGGCTGATATG+GGG	-	Chr5:30742583-30742602	None:intergenic	50.0%
!	AGGCTAGCTGATCCGGTTTA+TGG	+	Chr5:30742322-30742341	MsG0580026097.01.T01:CDS	50.0%
!	TCAAGCTAGGCTAGCTGATC+CGG	+	Chr5:30742315-30742334	MsG0580026097.01.T01:CDS	50.0%
!!	CCCTACTTTGGTACTGACCA+AGG	+	Chr5:30742175-30742194	MsG0580026097.01.T01:CDS	50.0%
!!	GGTGGTGATGGTAGTAGTTC+GGG	+	Chr5:30742019-30742038	MsG0580026097.01.T01:CDS	50.0%
	CCGCAAACTTAGCTGCACCT+TGG	-	Chr5:30742195-30742214	None:intergenic	55.0%
	GCTGAGTCACAAGGTGGTGA+TGG	+	Chr5:30742007-30742026	MsG0580026097.01.T01:CDS	55.0%
	GCTTCATGGCGATGGTTAGC+GGG	-	Chr5:30742271-30742290	None:intergenic	55.0%
!!!	CCCTGGTTTTGGCCTCACAA+TGG	+	Chr5:30742674-30742693	MsG0580026097.01.T01:CDS	55.0%
	GCGATGGTTAGCGGGAACGT+TGG	-	Chr5:30742263-30742282	None:intergenic	60.0%
	GGTGGCAGCTATGCAAGCAG+AGG	+	Chr5:30742491-30742510	MsG0580026097.01.T01:intron	60.0%
!	GCGGCTGTGCACAAGGTGTT+TGG	+	Chr5:30742211-30742230	MsG0580026097.01.T01:CDS	60.0%
	TCGCCGCAGCTTCATGGCGA+TGG	-	Chr5:30742279-30742298	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
Chr5	gene	30742004	30742725	30742004	ID=MsG0580026097.01;Name=MsG0580026097.01
Chr5	mRNA	30742004	30742725	30742004	ID=MsG0580026097.01.T01;Parent=MsG0580026097.01;Name=MsG0580026097.01.T01;_AED=0.11;_eAED=0.11;_QI=0\|0\|0\|1\|1\|1\|2\|0\|202
Chr5	exon	30742004	30742378	30742004	ID=MsG0580026097.01.T01:exon:7346;Parent=MsG0580026097.01.T01
Chr5	exon	30742492	30742725	30742492	ID=MsG0580026097.01.T01:exon:7347;Parent=MsG0580026097.01.T01
Chr5	CDS	30742004	30742378	30742004	ID=MsG0580026097.01.T01:cds;Parent=MsG0580026097.01.T01
Chr5	CDS	30742492	30742725	30742492	ID=MsG0580026097.01.T01:cds;Parent=MsG0580026097.01.T01

Gene Sequence

>MsG0580026097.01.T01

ATGGCTGAGTCACAAGGTGGTGATGGTAGTAGTTCGGGAAACAGGCGCAATAAAAGCGCAAATGCTGCAAAGCGTGCAATGGCAAGAGCAACACAAGATGAACCGATTATATCTCCGTGTGGTGCTTGCAAGTTCTTGAGGAGGAAGTGTAGTAGTGGATGCATCTTTGCACCCTACTTTGGTACTGACCAAGGTGCAGCTAAGTTTGCGGCTGTGCACAAGGTGTTTGGTGCTAGCAATGTGTCGAAGCACTTGTCCAACGTTCCCGCTAACCATCGCCATGAAGCTGCGGCGACTATTTCCTATGAGGCTCAAGCTAGGCTAGCTGATCCGGTTTATGGTTGTGTGTCCACCATTCTTGCTTTGCAGCAACAGGTGGCAGCTATGCAAGCAGAGGTCTCAATGATGCAAACTCAATTGATGAATAAGAGGCTTGCATATGCAAATGCAAGTACTCTTCAAACCCCATATCAGCCGCCGTTTCAATTTGTGCAGCCAGCATATTCCAACAACTCATCTGCTTCCACCACCAACCTTATGAACATGAACAACTTCAACCCTGGTTTTGGCCTCACAATGGAGACAACACCTTCATCACAGAGCTTGTAG

Protein sequence

>MsG0580026097.01.T01

MAESQGGDGSSSGNRRNKSANAAKRAMARATQDEPIISPCGACKFLRRKCSSGCIFAPYFGTDQGAAKFAAVHKVFGASNVSKHLSNVPANHRHEAAATISYEAQARLADPVYGCVSTILALQQQVAAMQAEVSMMQTQLMNKRLAYANASTLQTPYQPPFQFVQPAYSNNSSASTTNLMNMNNFNPGFGLTMETTPSSQSL*