Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580026980.01.T01 | XP_003589705.1 | 66.667 | 240 | 27 | 3 | 1 | 195 | 1 | 232 | 8.61E-100 | 298 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580026980.01.T01 | Q8RYD9 | 47.826 | 184 | 65 | 2 | 1 | 159 | 1 | 178 | 3.88E-52 | 170 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580026980.01.T01 | G7IA45 | 66.667 | 240 | 27 | 3 | 1 | 195 | 1 | 232 | 4.11e-100 | 298 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0580026980.01 | MsG0480022143.01 | PPI |
| MsG0780039487.01 | MsG0580026980.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580026980.01.T01 | MTR_1g038300 | 66.667 | 240 | 27 | 3 | 1 | 195 | 1 | 232 | 1.04e-103 | 298 |
| MsG0580026980.01.T01 | MTR_7g075850 | 40.476 | 168 | 73 | 2 | 1 | 141 | 1 | 168 | 5.30e-33 | 119 |
| MsG0580026980.01.T01 | MTR_3g088615 | 40.606 | 165 | 71 | 3 | 1 | 142 | 1 | 161 | 7.30e-33 | 116 |
| MsG0580026980.01.T01 | MTR_7g016630 | 37.500 | 168 | 78 | 2 | 1 | 142 | 1 | 167 | 7.89e-32 | 115 |
| MsG0580026980.01.T01 | MTR_4g109830 | 37.952 | 166 | 74 | 3 | 1 | 138 | 1 | 165 | 8.24e-31 | 112 |
| MsG0580026980.01.T01 | MTR_5g031000 | 34.545 | 220 | 94 | 6 | 1 | 180 | 1 | 210 | 9.50e-31 | 112 |
| MsG0580026980.01.T01 | MTR_4g102530 | 36.571 | 175 | 81 | 2 | 1 | 147 | 1 | 173 | 3.51e-30 | 110 |
| MsG0580026980.01.T01 | MTR_8g066260 | 35.542 | 166 | 78 | 3 | 1 | 138 | 1 | 165 | 5.66e-30 | 110 |
| MsG0580026980.01.T01 | MTR_2g009890 | 36.782 | 174 | 69 | 3 | 1 | 141 | 1 | 166 | 1.09e-29 | 110 |
| MsG0580026980.01.T01 | MTR_5g031000 | 36.413 | 184 | 77 | 3 | 1 | 152 | 1 | 176 | 2.07e-29 | 109 |
| MsG0580026980.01.T01 | MTR_8g033270 | 40.116 | 172 | 67 | 3 | 1 | 141 | 1 | 167 | 2.19e-29 | 109 |
| MsG0580026980.01.T01 | MTR_5g046790 | 36.782 | 174 | 81 | 4 | 1 | 146 | 1 | 173 | 4.68e-29 | 107 |
| MsG0580026980.01.T01 | MTR_7g075870 | 40.000 | 170 | 73 | 3 | 1 | 142 | 1 | 169 | 5.41e-29 | 107 |
| MsG0580026980.01.T01 | MTR_7g075870 | 40.000 | 170 | 72 | 3 | 1 | 142 | 1 | 168 | 1.28e-28 | 106 |
| MsG0580026980.01.T01 | MTR_1g029670 | 37.888 | 161 | 73 | 3 | 1 | 138 | 1 | 157 | 4.37e-28 | 104 |
| MsG0580026980.01.T01 | MTR_7g016600 | 33.023 | 215 | 113 | 4 | 1 | 188 | 1 | 211 | 1.93e-27 | 104 |
| MsG0580026980.01.T01 | MTR_8g097090 | 37.059 | 170 | 77 | 3 | 1 | 141 | 1 | 169 | 3.11e-27 | 103 |
| MsG0580026980.01.T01 | MTR_3g084980 | 35.838 | 173 | 69 | 3 | 1 | 138 | 1 | 166 | 5.28e-27 | 103 |
| MsG0580026980.01.T01 | MTR_5g032150 | 40.462 | 173 | 73 | 5 | 1 | 145 | 1 | 171 | 6.33e-27 | 102 |
| MsG0580026980.01.T01 | MTR_6g015975 | 36.000 | 175 | 72 | 3 | 1 | 142 | 1 | 168 | 1.64e-26 | 102 |
| MsG0580026980.01.T01 | MTR_1g101970 | 35.638 | 188 | 81 | 5 | 1 | 152 | 1 | 184 | 2.51e-26 | 100 |
| MsG0580026980.01.T01 | MTR_5g046870 | 61.333 | 75 | 28 | 1 | 1 | 75 | 1 | 74 | 3.41e-26 | 97.4 |
| MsG0580026980.01.T01 | MTR_5g032520 | 39.884 | 173 | 74 | 5 | 1 | 145 | 1 | 171 | 7.51e-26 | 99.8 |
| MsG0580026980.01.T01 | MTR_8g087860 | 34.337 | 166 | 79 | 3 | 1 | 138 | 17 | 180 | 8.02e-26 | 100 |
| MsG0580026980.01.T01 | MTR_3g452380 | 32.579 | 221 | 109 | 6 | 1 | 193 | 16 | 224 | 1.00e-25 | 99.8 |
| MsG0580026980.01.T01 | MTR_8g033220 | 31.527 | 203 | 96 | 3 | 1 | 168 | 1 | 195 | 1.04e-25 | 99.4 |
| MsG0580026980.01.T01 | MTR_8g033220 | 31.527 | 203 | 96 | 3 | 1 | 168 | 1 | 195 | 1.09e-25 | 99.4 |
| MsG0580026980.01.T01 | MTR_1g053070 | 40.323 | 186 | 81 | 7 | 1 | 167 | 1 | 175 | 1.33e-25 | 99.8 |
| MsG0580026980.01.T01 | MTR_3g005530 | 34.911 | 169 | 80 | 3 | 1 | 141 | 1 | 167 | 1.95e-25 | 98.6 |
| MsG0580026980.01.T01 | MTR_5g066180 | 34.857 | 175 | 86 | 2 | 1 | 149 | 1 | 173 | 1.64e-24 | 96.3 |
| MsG0580026980.01.T01 | MTR_5g021270 | 35.088 | 171 | 78 | 2 | 1 | 141 | 1 | 168 | 2.18e-24 | 95.9 |
| MsG0580026980.01.T01 | MTR_5g021270 | 35.088 | 171 | 78 | 2 | 1 | 141 | 1 | 168 | 2.25e-24 | 95.9 |
| MsG0580026980.01.T01 | MTR_2g017865 | 34.337 | 166 | 79 | 3 | 1 | 138 | 16 | 179 | 2.36e-24 | 96.7 |
| MsG0580026980.01.T01 | MTR_0003s0590 | 33.690 | 187 | 89 | 5 | 1 | 154 | 1 | 185 | 1.06e-23 | 94.7 |
| MsG0580026980.01.T01 | MTR_4g109810 | 32.948 | 173 | 77 | 3 | 1 | 141 | 1 | 166 | 1.19e-23 | 94.4 |
| MsG0580026980.01.T01 | MTR_3g113030 | 31.081 | 222 | 106 | 6 | 1 | 184 | 1 | 213 | 1.23e-23 | 94.0 |
| MsG0580026980.01.T01 | MTR_6g464720 | 35.294 | 170 | 80 | 3 | 1 | 141 | 1 | 169 | 1.87e-23 | 94.0 |
| MsG0580026980.01.T01 | MTR_4g093970 | 36.571 | 175 | 79 | 3 | 1 | 145 | 27 | 199 | 8.39e-23 | 92.0 |
| MsG0580026980.01.T01 | MTR_4g093030 | 57.471 | 87 | 23 | 3 | 1 | 73 | 1 | 87 | 9.64e-23 | 89.7 |
| MsG0580026980.01.T01 | MTR_4g036050 | 30.583 | 206 | 101 | 5 | 1 | 177 | 1 | 193 | 2.45e-22 | 90.1 |
| MsG0580026980.01.T01 | MTR_2g461710 | 65.000 | 60 | 21 | 0 | 1 | 60 | 1 | 60 | 7.03e-22 | 84.7 |
| MsG0580026980.01.T01 | MTR_4g036050 | 32.044 | 181 | 89 | 6 | 1 | 152 | 1 | 176 | 1.54e-21 | 87.4 |
| MsG0580026980.01.T01 | MTR_4g036050 | 52.000 | 75 | 35 | 1 | 1 | 75 | 1 | 74 | 2.81e-20 | 84.0 |
| MsG0580026980.01.T01 | MTR_4g036050 | 52.000 | 75 | 35 | 1 | 1 | 75 | 1 | 74 | 3.17e-20 | 84.0 |
| MsG0580026980.01.T01 | MTR_5g066960 | 62.712 | 59 | 22 | 0 | 1 | 59 | 1 | 59 | 3.94e-20 | 80.1 |
| MsG0580026980.01.T01 | MTR_3g102570 | 56.338 | 71 | 30 | 1 | 1 | 71 | 1 | 70 | 8.63e-20 | 85.5 |
| MsG0580026980.01.T01 | MTR_5g053390 | 38.346 | 133 | 65 | 3 | 2 | 127 | 9 | 131 | 6.48e-19 | 81.6 |
| MsG0580026980.01.T01 | MTR_8g079502 | 33.121 | 157 | 83 | 6 | 1 | 147 | 1 | 145 | 7.99e-18 | 77.4 |
| MsG0580026980.01.T01 | MTR_4g084740 | 49.296 | 71 | 35 | 1 | 1 | 71 | 1 | 70 | 2.11e-17 | 79.0 |
| MsG0580026980.01.T01 | MTR_5g055100 | 37.121 | 132 | 66 | 3 | 2 | 126 | 9 | 130 | 1.19e-16 | 75.5 |
| MsG0580026980.01.T01 | MTR_4g108720 | 35.075 | 134 | 68 | 3 | 1 | 115 | 1 | 134 | 1.39e-16 | 77.0 |
| MsG0580026980.01.T01 | MTR_8g086290 | 48.649 | 74 | 36 | 1 | 2 | 75 | 12 | 83 | 1.64e-16 | 73.9 |
| MsG0580026980.01.T01 | MTR_1g108510 | 47.143 | 70 | 35 | 1 | 2 | 71 | 9 | 76 | 4.25e-16 | 73.9 |
| MsG0580026980.01.T01 | MTR_2g085280 | 34.921 | 126 | 71 | 3 | 2 | 123 | 9 | 127 | 4.62e-16 | 73.9 |
| MsG0580026980.01.T01 | MTR_3g030770 | 47.143 | 70 | 35 | 1 | 2 | 71 | 9 | 76 | 4.90e-16 | 73.9 |
| MsG0580026980.01.T01 | MTR_2g085250 | 34.921 | 126 | 71 | 3 | 2 | 123 | 9 | 127 | 5.02e-16 | 73.9 |
| MsG0580026980.01.T01 | MTR_2g093190 | 47.143 | 70 | 35 | 1 | 2 | 71 | 9 | 76 | 6.54e-16 | 73.6 |
| MsG0580026980.01.T01 | MTR_3g052920 | 51.429 | 70 | 32 | 1 | 2 | 71 | 9 | 76 | 7.47e-16 | 73.6 |
| MsG0580026980.01.T01 | MTR_5g045560 | 35.338 | 133 | 69 | 3 | 1 | 126 | 8 | 130 | 2.86e-15 | 72.0 |
| MsG0580026980.01.T01 | MTR_4g094632 | 52.542 | 59 | 28 | 0 | 1 | 59 | 1 | 59 | 3.61e-15 | 70.1 |
| MsG0580026980.01.T01 | MTR_1g054265 | 36.000 | 100 | 60 | 2 | 1 | 98 | 1 | 98 | 4.72e-15 | 70.1 |
| MsG0580026980.01.T01 | MTR_1g047550 | 46.479 | 71 | 36 | 1 | 1 | 71 | 1 | 69 | 5.13e-15 | 70.1 |
| MsG0580026980.01.T01 | MTR_1g108580 | 47.143 | 70 | 35 | 1 | 2 | 71 | 9 | 76 | 5.48e-15 | 70.9 |
| MsG0580026980.01.T01 | MTR_2g030740 | 48.571 | 70 | 34 | 1 | 2 | 71 | 9 | 76 | 9.85e-15 | 70.5 |
| MsG0580026980.01.T01 | MTR_4g094638 | 55.769 | 52 | 23 | 0 | 1 | 52 | 1 | 52 | 1.00e-14 | 69.3 |
| MsG0580026980.01.T01 | MTR_3g052870 | 47.143 | 70 | 35 | 1 | 2 | 71 | 9 | 76 | 1.17e-14 | 69.7 |
| MsG0580026980.01.T01 | MTR_8g043650 | 47.143 | 70 | 35 | 1 | 2 | 71 | 9 | 76 | 2.18e-14 | 69.3 |
| MsG0580026980.01.T01 | MTR_1g105920 | 47.143 | 70 | 35 | 1 | 2 | 71 | 9 | 76 | 2.25e-14 | 69.3 |
| MsG0580026980.01.T01 | MTR_1g105910 | 47.143 | 70 | 35 | 1 | 2 | 71 | 9 | 76 | 2.27e-14 | 69.3 |
| MsG0580026980.01.T01 | MTR_1g106070 | 47.143 | 70 | 35 | 1 | 2 | 71 | 9 | 76 | 3.69e-14 | 67.8 |
| MsG0580026980.01.T01 | MTR_1g077360 | 47.143 | 70 | 35 | 1 | 2 | 71 | 9 | 76 | 4.72e-14 | 68.6 |
| MsG0580026980.01.T01 | MTR_2g105290 | 44.000 | 75 | 40 | 1 | 1 | 75 | 11 | 83 | 5.86e-14 | 67.0 |
| MsG0580026980.01.T01 | MTR_5g041650 | 38.961 | 77 | 47 | 0 | 1 | 77 | 38 | 114 | 6.18e-14 | 69.7 |
| MsG0580026980.01.T01 | MTR_1g012570 | 48.571 | 70 | 34 | 1 | 2 | 71 | 9 | 76 | 6.27e-14 | 68.2 |
| MsG0580026980.01.T01 | MTR_1g063160 | 54.000 | 50 | 23 | 0 | 1 | 50 | 1 | 50 | 8.27e-14 | 67.0 |
| MsG0580026980.01.T01 | MTR_8g051580 | 40.845 | 71 | 40 | 1 | 1 | 71 | 1 | 69 | 1.32e-13 | 66.2 |
| MsG0580026980.01.T01 | MTR_1g075600 | 33.884 | 121 | 71 | 3 | 2 | 119 | 9 | 123 | 1.61e-13 | 67.0 |
| MsG0580026980.01.T01 | MTR_4g131030 | 57.143 | 49 | 21 | 0 | 1 | 49 | 1 | 49 | 1.83e-13 | 66.6 |
| MsG0580026980.01.T01 | MTR_1g041615 | 47.541 | 61 | 30 | 1 | 13 | 71 | 17 | 77 | 2.67e-13 | 64.3 |
| MsG0580026980.01.T01 | MTR_0121s0100 | 42.857 | 70 | 38 | 1 | 2 | 71 | 9 | 76 | 9.42e-13 | 62.8 |
| MsG0580026980.01.T01 | MTR_3g080940 | 42.254 | 71 | 39 | 1 | 1 | 71 | 8 | 76 | 1.02e-12 | 64.3 |
| MsG0580026980.01.T01 | MTR_3g030780 | 44.286 | 70 | 37 | 1 | 2 | 71 | 9 | 76 | 2.28e-12 | 62.0 |
| MsG0580026980.01.T01 | MTR_8g046350 | 40.845 | 71 | 40 | 1 | 1 | 71 | 1 | 69 | 4.44e-12 | 62.0 |
| MsG0580026980.01.T01 | MTR_0121s0080 | 44.286 | 70 | 37 | 1 | 2 | 71 | 9 | 76 | 6.22e-12 | 62.8 |
| MsG0580026980.01.T01 | MTR_7g028448 | 45.902 | 61 | 31 | 1 | 15 | 75 | 25 | 83 | 3.62e-11 | 59.7 |
| MsG0580026980.01.T01 | MTR_4g036915 | 45.902 | 61 | 31 | 1 | 15 | 75 | 25 | 83 | 3.62e-11 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580026980.01.T01 | AT5G23260 | 47.826 | 184 | 65 | 2 | 1 | 159 | 1 | 178 | 3.96e-53 | 170 |
| MsG0580026980.01.T01 | AT5G23260 | 47.826 | 184 | 65 | 2 | 1 | 159 | 17 | 194 | 7.03e-53 | 170 |
| MsG0580026980.01.T01 | AT5G23260 | 45.109 | 184 | 65 | 3 | 1 | 159 | 17 | 189 | 5.92e-47 | 155 |
| MsG0580026980.01.T01 | AT5G23260 | 42.391 | 184 | 61 | 3 | 1 | 159 | 1 | 164 | 7.53e-42 | 141 |
| MsG0580026980.01.T01 | AT1G26310 | 36.932 | 176 | 80 | 3 | 1 | 146 | 1 | 175 | 2.34e-32 | 117 |
| MsG0580026980.01.T01 | AT2G14210 | 38.919 | 185 | 73 | 3 | 1 | 152 | 1 | 178 | 8.71e-32 | 115 |
| MsG0580026980.01.T01 | AT3G57230 | 32.068 | 237 | 104 | 6 | 1 | 189 | 1 | 228 | 9.73e-32 | 115 |
| MsG0580026980.01.T01 | AT3G57230 | 32.068 | 237 | 104 | 6 | 1 | 189 | 1 | 228 | 9.73e-32 | 115 |
| MsG0580026980.01.T01 | AT2G14210 | 38.919 | 185 | 73 | 3 | 1 | 152 | 1 | 178 | 1.13e-31 | 115 |
| MsG0580026980.01.T01 | AT4G37940 | 34.348 | 230 | 98 | 7 | 1 | 186 | 1 | 221 | 1.43e-31 | 114 |
| MsG0580026980.01.T01 | AT5G60910 | 37.278 | 169 | 77 | 3 | 1 | 141 | 1 | 168 | 3.60e-31 | 114 |
| MsG0580026980.01.T01 | AT1G69120 | 36.782 | 174 | 81 | 5 | 1 | 146 | 1 | 173 | 2.75e-30 | 111 |
| MsG0580026980.01.T01 | AT3G61120 | 40.000 | 170 | 62 | 3 | 1 | 138 | 1 | 162 | 3.39e-30 | 111 |
| MsG0580026980.01.T01 | AT1G69120 | 36.782 | 174 | 81 | 5 | 1 | 146 | 1 | 173 | 5.48e-30 | 111 |
| MsG0580026980.01.T01 | AT5G62165 | 39.645 | 169 | 72 | 2 | 1 | 141 | 1 | 167 | 1.04e-29 | 109 |
| MsG0580026980.01.T01 | AT5G62165 | 39.645 | 169 | 72 | 2 | 1 | 141 | 1 | 167 | 1.04e-29 | 109 |
| MsG0580026980.01.T01 | AT5G62165 | 39.645 | 169 | 72 | 2 | 1 | 141 | 1 | 167 | 1.04e-29 | 109 |
| MsG0580026980.01.T01 | AT4G09960 | 37.572 | 173 | 78 | 3 | 1 | 145 | 2 | 172 | 3.35e-29 | 108 |
| MsG0580026980.01.T01 | AT4G09960 | 37.572 | 173 | 78 | 3 | 1 | 145 | 11 | 181 | 3.36e-29 | 108 |
| MsG0580026980.01.T01 | AT4G09960 | 37.572 | 173 | 78 | 3 | 1 | 145 | 1 | 171 | 3.57e-29 | 108 |
| MsG0580026980.01.T01 | AT4G37940 | 32.877 | 219 | 102 | 5 | 1 | 186 | 1 | 207 | 5.33e-29 | 107 |
| MsG0580026980.01.T01 | AT4G09960 | 37.572 | 173 | 78 | 3 | 1 | 145 | 27 | 197 | 9.05e-29 | 108 |
| MsG0580026980.01.T01 | AT5G13790 | 40.449 | 178 | 80 | 4 | 1 | 154 | 1 | 176 | 1.27e-28 | 108 |
| MsG0580026980.01.T01 | AT5G20240 | 33.654 | 208 | 102 | 6 | 1 | 182 | 1 | 198 | 2.36e-28 | 105 |
| MsG0580026980.01.T01 | AT2G45650 | 37.931 | 174 | 67 | 3 | 1 | 141 | 1 | 166 | 4.17e-28 | 106 |
| MsG0580026980.01.T01 | AT5G13790 | 39.779 | 181 | 80 | 5 | 1 | 154 | 1 | 179 | 6.37e-28 | 106 |
| MsG0580026980.01.T01 | AT1G24260 | 36.257 | 171 | 78 | 3 | 1 | 141 | 1 | 170 | 2.55e-27 | 104 |
| MsG0580026980.01.T01 | AT3G58780 | 33.163 | 196 | 107 | 5 | 1 | 173 | 16 | 210 | 3.50e-27 | 103 |
| MsG0580026980.01.T01 | AT3G58780 | 31.754 | 211 | 97 | 5 | 1 | 173 | 16 | 217 | 3.66e-27 | 103 |
| MsG0580026980.01.T01 | AT3G58780 | 31.754 | 211 | 97 | 5 | 1 | 173 | 22 | 223 | 4.61e-27 | 103 |
| MsG0580026980.01.T01 | AT3G02310 | 38.235 | 170 | 76 | 4 | 1 | 142 | 1 | 169 | 5.70e-27 | 102 |
| MsG0580026980.01.T01 | AT5G20240 | 39.568 | 139 | 61 | 2 | 1 | 116 | 1 | 139 | 7.92e-27 | 100 |
| MsG0580026980.01.T01 | AT3G02310 | 38.235 | 170 | 76 | 4 | 1 | 142 | 1 | 169 | 9.09e-27 | 102 |
| MsG0580026980.01.T01 | AT5G62165 | 39.241 | 158 | 66 | 2 | 1 | 130 | 1 | 156 | 9.75e-27 | 100 |
| MsG0580026980.01.T01 | AT5G62165 | 39.241 | 158 | 66 | 2 | 1 | 130 | 1 | 156 | 9.75e-27 | 100 |
| MsG0580026980.01.T01 | AT5G62165 | 39.241 | 158 | 66 | 2 | 1 | 130 | 1 | 156 | 9.75e-27 | 100 |
| MsG0580026980.01.T01 | AT5G51870 | 37.705 | 183 | 80 | 4 | 1 | 151 | 1 | 181 | 1.64e-26 | 101 |
| MsG0580026980.01.T01 | AT5G65050 | 37.662 | 154 | 86 | 3 | 1 | 145 | 1 | 153 | 1.67e-26 | 100 |
| MsG0580026980.01.T01 | AT5G51870 | 38.824 | 170 | 73 | 3 | 1 | 141 | 1 | 168 | 2.07e-26 | 100 |
| MsG0580026980.01.T01 | AT3G57390 | 35.052 | 194 | 89 | 4 | 1 | 159 | 1 | 192 | 2.11e-26 | 101 |
| MsG0580026980.01.T01 | AT5G51870 | 37.705 | 183 | 80 | 4 | 1 | 151 | 11 | 191 | 2.67e-26 | 100 |
| MsG0580026980.01.T01 | AT3G30260 | 39.189 | 148 | 61 | 3 | 1 | 120 | 1 | 147 | 3.27e-26 | 101 |
| MsG0580026980.01.T01 | AT1G24260 | 36.047 | 172 | 78 | 3 | 1 | 141 | 1 | 171 | 3.63e-26 | 101 |
| MsG0580026980.01.T01 | AT3G57230 | 39.726 | 146 | 47 | 3 | 1 | 113 | 1 | 138 | 3.82e-26 | 98.2 |
| MsG0580026980.01.T01 | AT3G57390 | 35.052 | 194 | 89 | 4 | 1 | 159 | 1 | 192 | 3.89e-26 | 101 |
| MsG0580026980.01.T01 | AT2G42830 | 34.911 | 169 | 80 | 3 | 1 | 141 | 16 | 182 | 5.38e-26 | 100 |
| MsG0580026980.01.T01 | AT5G51860 | 37.079 | 178 | 81 | 2 | 1 | 149 | 1 | 176 | 6.11e-26 | 99.8 |
| MsG0580026980.01.T01 | AT4G18960 | 31.878 | 229 | 103 | 6 | 2 | 185 | 18 | 238 | 6.15e-26 | 100 |
| MsG0580026980.01.T01 | AT5G15800 | 36.471 | 170 | 79 | 4 | 1 | 142 | 1 | 169 | 8.10e-26 | 100 |
| MsG0580026980.01.T01 | AT4G09960 | 36.994 | 173 | 75 | 4 | 1 | 141 | 96 | 266 | 9.04e-26 | 101 |
| MsG0580026980.01.T01 | AT5G15800 | 36.471 | 170 | 79 | 4 | 1 | 142 | 1 | 169 | 1.23e-25 | 100 |
| MsG0580026980.01.T01 | AT5G65050 | 33.333 | 165 | 89 | 2 | 1 | 145 | 1 | 164 | 1.52e-25 | 97.8 |
| MsG0580026980.01.T01 | AT2G03710 | 35.632 | 174 | 85 | 4 | 1 | 147 | 1 | 174 | 1.54e-25 | 97.8 |
| MsG0580026980.01.T01 | AT5G51860 | 37.427 | 171 | 76 | 2 | 1 | 142 | 1 | 169 | 1.96e-25 | 98.2 |
| MsG0580026980.01.T01 | AT5G65070 | 34.659 | 176 | 72 | 3 | 1 | 145 | 1 | 164 | 2.24e-25 | 97.8 |
| MsG0580026980.01.T01 | AT2G45660 | 36.842 | 171 | 76 | 3 | 1 | 142 | 1 | 168 | 2.58e-25 | 98.2 |
| MsG0580026980.01.T01 | AT5G65060 | 35.152 | 165 | 75 | 3 | 1 | 145 | 1 | 153 | 2.58e-25 | 97.4 |
| MsG0580026980.01.T01 | AT5G65060 | 33.939 | 165 | 88 | 3 | 1 | 145 | 1 | 164 | 3.39e-25 | 97.1 |
| MsG0580026980.01.T01 | AT2G03710 | 35.714 | 168 | 81 | 4 | 1 | 141 | 1 | 168 | 3.82e-25 | 98.6 |
| MsG0580026980.01.T01 | AT2G22540 | 35.676 | 185 | 89 | 3 | 1 | 157 | 1 | 183 | 4.02e-25 | 98.2 |
| MsG0580026980.01.T01 | AT2G22540 | 35.676 | 185 | 89 | 3 | 1 | 157 | 1 | 183 | 4.02e-25 | 98.2 |
| MsG0580026980.01.T01 | AT2G03710 | 35.714 | 168 | 81 | 4 | 1 | 141 | 1 | 168 | 4.21e-25 | 98.6 |
| MsG0580026980.01.T01 | AT5G65050 | 33.333 | 165 | 89 | 2 | 1 | 145 | 1 | 164 | 4.93e-25 | 97.1 |
| MsG0580026980.01.T01 | AT5G65060 | 33.939 | 165 | 88 | 3 | 1 | 145 | 1 | 164 | 5.26e-25 | 96.7 |
| MsG0580026980.01.T01 | AT4G22950 | 36.667 | 180 | 82 | 6 | 1 | 151 | 1 | 177 | 1.01e-24 | 96.7 |
| MsG0580026980.01.T01 | AT4G22950 | 36.667 | 180 | 82 | 6 | 1 | 151 | 1 | 177 | 1.01e-24 | 96.7 |
| MsG0580026980.01.T01 | AT5G62165 | 56.977 | 86 | 35 | 1 | 1 | 86 | 1 | 84 | 1.24e-24 | 93.2 |
| MsG0580026980.01.T01 | AT2G42830 | 34.857 | 175 | 82 | 4 | 1 | 145 | 16 | 188 | 1.33e-24 | 97.1 |
| MsG0580026980.01.T01 | AT4G37940 | 36.424 | 151 | 55 | 3 | 1 | 118 | 1 | 143 | 1.60e-24 | 95.1 |
| MsG0580026980.01.T01 | AT5G10140 | 36.667 | 150 | 74 | 4 | 1 | 130 | 1 | 149 | 1.88e-24 | 95.1 |
| MsG0580026980.01.T01 | AT4G22950 | 36.994 | 173 | 78 | 5 | 1 | 145 | 1 | 170 | 2.65e-24 | 94.4 |
| MsG0580026980.01.T01 | AT4G24540 | 31.982 | 222 | 110 | 5 | 1 | 183 | 1 | 220 | 4.49e-24 | 95.1 |
| MsG0580026980.01.T01 | AT5G62165 | 56.977 | 86 | 35 | 1 | 1 | 86 | 1 | 84 | 4.52e-24 | 93.2 |
| MsG0580026980.01.T01 | AT5G62165 | 56.977 | 86 | 35 | 1 | 1 | 86 | 1 | 84 | 4.52e-24 | 93.2 |
| MsG0580026980.01.T01 | AT5G62165 | 56.977 | 86 | 35 | 1 | 1 | 86 | 1 | 84 | 4.52e-24 | 93.2 |
| MsG0580026980.01.T01 | AT5G62165 | 56.977 | 86 | 35 | 1 | 1 | 86 | 1 | 84 | 4.52e-24 | 93.2 |
| MsG0580026980.01.T01 | AT5G62165 | 56.977 | 86 | 35 | 1 | 1 | 86 | 1 | 84 | 4.52e-24 | 93.2 |
| MsG0580026980.01.T01 | AT5G51870 | 40.136 | 147 | 79 | 5 | 1 | 147 | 1 | 138 | 5.13e-24 | 93.6 |
| MsG0580026980.01.T01 | AT5G62165 | 56.977 | 86 | 35 | 1 | 1 | 86 | 1 | 84 | 7.05e-24 | 94.0 |
| MsG0580026980.01.T01 | AT5G62165 | 56.977 | 86 | 35 | 1 | 1 | 86 | 1 | 84 | 7.05e-24 | 94.0 |
| MsG0580026980.01.T01 | AT4G09960 | 40.719 | 167 | 67 | 7 | 1 | 145 | 1 | 157 | 7.45e-24 | 94.4 |
| MsG0580026980.01.T01 | AT5G51870 | 40.136 | 147 | 79 | 5 | 1 | 147 | 24 | 161 | 1.14e-23 | 93.2 |
| MsG0580026980.01.T01 | AT1G24260 | 58.904 | 73 | 29 | 1 | 1 | 73 | 1 | 72 | 1.35e-23 | 94.0 |
| MsG0580026980.01.T01 | AT5G10140 | 36.095 | 169 | 85 | 4 | 1 | 147 | 1 | 168 | 2.45e-23 | 92.0 |
| MsG0580026980.01.T01 | AT5G10140 | 36.301 | 146 | 72 | 4 | 1 | 126 | 1 | 145 | 5.72e-23 | 91.7 |
| MsG0580026980.01.T01 | AT5G10140 | 35.616 | 146 | 73 | 3 | 1 | 126 | 1 | 145 | 6.07e-23 | 90.5 |
| MsG0580026980.01.T01 | AT2G22630 | 34.302 | 172 | 84 | 4 | 1 | 145 | 1 | 170 | 1.24e-22 | 91.3 |
| MsG0580026980.01.T01 | AT2G22630 | 34.302 | 172 | 84 | 4 | 1 | 145 | 1 | 170 | 1.24e-22 | 91.3 |
| MsG0580026980.01.T01 | AT3G58780 | 59.459 | 74 | 28 | 1 | 1 | 74 | 16 | 87 | 1.29e-22 | 92.4 |
| MsG0580026980.01.T01 | AT2G45660 | 35.849 | 159 | 70 | 3 | 1 | 130 | 1 | 156 | 1.44e-22 | 89.4 |
| MsG0580026980.01.T01 | AT5G65070 | 46.465 | 99 | 41 | 2 | 1 | 99 | 1 | 87 | 1.61e-22 | 89.0 |
| MsG0580026980.01.T01 | AT3G58780 | 28.947 | 228 | 106 | 6 | 1 | 173 | 16 | 242 | 1.84e-22 | 92.0 |
| MsG0580026980.01.T01 | AT4G11880 | 36.646 | 161 | 66 | 5 | 1 | 130 | 1 | 156 | 8.96e-22 | 87.8 |
| MsG0580026980.01.T01 | AT4G11880 | 36.646 | 161 | 66 | 5 | 1 | 130 | 1 | 156 | 8.96e-22 | 87.8 |
| MsG0580026980.01.T01 | AT1G77080 | 34.091 | 176 | 95 | 3 | 1 | 156 | 1 | 175 | 9.59e-22 | 87.8 |
| MsG0580026980.01.T01 | AT1G71692 | 53.947 | 76 | 34 | 1 | 1 | 76 | 1 | 75 | 1.12e-21 | 88.6 |
| MsG0580026980.01.T01 | AT5G65070 | 43.925 | 107 | 48 | 2 | 1 | 107 | 1 | 95 | 1.42e-21 | 88.2 |
| MsG0580026980.01.T01 | AT5G65070 | 43.925 | 107 | 48 | 2 | 1 | 107 | 1 | 95 | 1.63e-21 | 88.6 |
| MsG0580026980.01.T01 | AT2G22540 | 35.393 | 178 | 94 | 3 | 1 | 157 | 1 | 178 | 1.67e-21 | 88.6 |
| MsG0580026980.01.T01 | AT5G65070 | 30.435 | 207 | 71 | 4 | 1 | 145 | 1 | 196 | 1.91e-21 | 88.2 |
| MsG0580026980.01.T01 | AT5G65050 | 32.886 | 149 | 79 | 2 | 1 | 129 | 1 | 148 | 2.44e-21 | 87.0 |
| MsG0580026980.01.T01 | AT4G11880 | 57.534 | 73 | 30 | 1 | 1 | 73 | 1 | 72 | 9.28e-21 | 86.3 |
| MsG0580026980.01.T01 | AT4G11880 | 57.534 | 73 | 30 | 1 | 1 | 73 | 1 | 72 | 9.28e-21 | 86.3 |
| MsG0580026980.01.T01 | AT3G54340 | 29.245 | 212 | 114 | 3 | 1 | 183 | 1 | 205 | 1.01e-20 | 86.3 |
| MsG0580026980.01.T01 | AT5G65080 | 36.667 | 150 | 74 | 4 | 1 | 130 | 8 | 156 | 1.04e-20 | 85.5 |
| MsG0580026980.01.T01 | AT1G77080 | 35.443 | 158 | 81 | 3 | 1 | 138 | 1 | 157 | 1.85e-20 | 84.7 |
| MsG0580026980.01.T01 | AT1G31140 | 36.667 | 150 | 66 | 2 | 1 | 121 | 1 | 150 | 2.03e-20 | 85.1 |
| MsG0580026980.01.T01 | AT1G77080 | 34.545 | 165 | 87 | 3 | 1 | 145 | 1 | 164 | 2.51e-20 | 84.0 |
| MsG0580026980.01.T01 | AT1G31140 | 37.162 | 148 | 66 | 2 | 1 | 121 | 1 | 148 | 7.65e-20 | 83.6 |
| MsG0580026980.01.T01 | AT1G77080 | 35.669 | 157 | 78 | 4 | 1 | 138 | 1 | 153 | 7.29e-19 | 80.5 |
| MsG0580026980.01.T01 | AT1G77980 | 53.521 | 71 | 32 | 1 | 1 | 71 | 1 | 70 | 9.11e-19 | 82.8 |
| MsG0580026980.01.T01 | AT1G22130 | 53.521 | 71 | 32 | 1 | 1 | 71 | 1 | 70 | 1.86e-18 | 82.0 |
| MsG0580026980.01.T01 | AT2G03060 | 46.667 | 75 | 40 | 0 | 1 | 75 | 1 | 75 | 7.64e-18 | 80.5 |
| MsG0580026980.01.T01 | AT2G03060 | 46.667 | 75 | 40 | 0 | 1 | 75 | 1 | 75 | 7.64e-18 | 80.5 |
| MsG0580026980.01.T01 | AT2G03060 | 46.667 | 75 | 40 | 0 | 1 | 75 | 1 | 75 | 7.64e-18 | 80.5 |
| MsG0580026980.01.T01 | AT2G03060 | 46.667 | 75 | 40 | 0 | 1 | 75 | 1 | 75 | 1.11e-17 | 80.1 |
| MsG0580026980.01.T01 | AT5G65080 | 34.228 | 149 | 72 | 3 | 1 | 127 | 8 | 152 | 1.95e-17 | 77.0 |
| MsG0580026980.01.T01 | AT1G77080 | 31.892 | 185 | 78 | 4 | 1 | 138 | 1 | 184 | 3.07e-17 | 77.0 |
| MsG0580026980.01.T01 | AT1G77950 | 49.296 | 71 | 35 | 1 | 1 | 71 | 1 | 70 | 1.04e-16 | 76.3 |
| MsG0580026980.01.T01 | AT1G77950 | 49.296 | 71 | 35 | 1 | 1 | 71 | 1 | 70 | 1.04e-16 | 76.3 |
| MsG0580026980.01.T01 | AT1G77950 | 49.296 | 71 | 35 | 1 | 1 | 71 | 1 | 70 | 1.04e-16 | 76.3 |
| MsG0580026980.01.T01 | AT1G77950 | 49.296 | 71 | 35 | 1 | 1 | 71 | 1 | 70 | 1.04e-16 | 76.3 |
| MsG0580026980.01.T01 | AT2G34440 | 46.575 | 73 | 37 | 1 | 1 | 73 | 1 | 71 | 2.17e-16 | 73.6 |
| MsG0580026980.01.T01 | AT1G18750 | 40.000 | 75 | 45 | 0 | 1 | 75 | 1 | 75 | 3.98e-16 | 75.9 |
| MsG0580026980.01.T01 | AT1G18750 | 40.000 | 75 | 45 | 0 | 1 | 75 | 1 | 75 | 4.52e-16 | 75.9 |
| MsG0580026980.01.T01 | AT1G18750 | 40.000 | 75 | 45 | 0 | 1 | 75 | 1 | 75 | 4.60e-16 | 75.9 |
| MsG0580026980.01.T01 | AT1G77080 | 33.557 | 149 | 76 | 2 | 1 | 130 | 1 | 145 | 7.84e-16 | 71.6 |
| MsG0580026980.01.T01 | AT1G72350 | 51.389 | 72 | 31 | 1 | 2 | 73 | 43 | 110 | 1.04e-15 | 72.8 |
| MsG0580026980.01.T01 | AT3G66656 | 37.143 | 105 | 64 | 1 | 1 | 105 | 1 | 103 | 6.63e-15 | 69.7 |
| MsG0580026980.01.T01 | AT4G37435 | 43.182 | 88 | 48 | 2 | 1 | 87 | 1 | 87 | 1.14e-14 | 69.3 |
| MsG0580026980.01.T01 | AT1G01530 | 49.123 | 57 | 29 | 0 | 1 | 57 | 6 | 62 | 2.76e-13 | 66.6 |
| MsG0580026980.01.T01 | AT3G04100 | 37.500 | 112 | 64 | 3 | 2 | 110 | 14 | 122 | 3.86e-13 | 65.5 |
| MsG0580026980.01.T01 | AT2G24840 | 33.645 | 107 | 68 | 2 | 1 | 106 | 62 | 166 | 5.28e-13 | 66.2 |
| MsG0580026980.01.T01 | AT5G60440 | 42.857 | 70 | 38 | 1 | 2 | 71 | 7 | 74 | 5.48e-13 | 66.2 |
| MsG0580026980.01.T01 | AT1G69540 | 41.096 | 73 | 42 | 1 | 1 | 73 | 1 | 72 | 6.31e-13 | 66.6 |
| MsG0580026980.01.T01 | AT4G36590 | 39.286 | 84 | 49 | 1 | 2 | 85 | 7 | 88 | 6.63e-13 | 65.5 |
| MsG0580026980.01.T01 | AT1G69540 | 41.096 | 73 | 42 | 1 | 1 | 73 | 1 | 72 | 8.28e-13 | 66.2 |
| MsG0580026980.01.T01 | AT1G65360 | 47.368 | 57 | 30 | 0 | 1 | 57 | 6 | 62 | 3.24e-12 | 63.5 |
Find 31 sgRNAs with CRISPR-Local
Find 116 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTTCATAATTATGAAAATT+TGG | 0.163190 | 5:-50561360 | None:intergenic |
| TCTTGTACCTTTCAATGATT+TGG | 0.251077 | 5:-50559990 | None:intergenic |
| AAGTACAGGTAAACGCATTA+TGG | 0.283333 | 5:+50560014 | MsG0580026980.01.T01:CDS |
| AAAATATCAATTTATCCAAC+TGG | 0.335012 | 5:+50561037 | MsG0580026980.01.T01:CDS |
| GGGTGAACATGATGATCAAC+AGG | 0.378608 | 5:+50560035 | MsG0580026980.01.T01:CDS |
| AGTACAGGTAAACGCATTAT+GGG | 0.444038 | 5:+50560015 | MsG0580026980.01.T01:CDS |
| GATGGAAAACATGGCTGTAA+TGG | 0.449814 | 5:+50561293 | MsG0580026980.01.T01:CDS |
| ATAATTATGAACTCAATACT+TGG | 0.467499 | 5:+50561370 | MsG0580026980.01.T01:CDS |
| TGAGCTCATGCAGCAGCAAA+TGG | 0.467662 | 5:+50560848 | MsG0580026980.01.T01:CDS |
| AGTAAATATTCTTACCCAGT+TGG | 0.493045 | 5:-50561052 | None:intergenic |
| TCAGGAGCACAAGGCAATGA+TGG | 0.496847 | 5:+50561275 | MsG0580026980.01.T01:intron |
| TGCTAAAGTTCGAAACCGCC+AGG | 0.500175 | 5:+50560393 | MsG0580026980.01.T01:CDS |
| GAAAGGTACAAGAGAAGTAC+AGG | 0.511083 | 5:+50560000 | MsG0580026980.01.T01:CDS |
| AAGGTGGTAATAACATTAGT+AGG | 0.527304 | 5:-50561075 | None:intergenic |
| CAAGGCAATGATGGAAAACA+TGG | 0.549940 | 5:+50561284 | MsG0580026980.01.T01:CDS |
| AGTATTGTTCTGATTTCACC+AGG | 0.558916 | 5:+50558764 | MsG0580026980.01.T01:CDS |
| TTTAATTGATCAGGAGCACA+AGG | 0.561708 | 5:+50561266 | MsG0580026980.01.T01:intron |
| TAATTATGAACTCAATACTT+GGG | 0.561939 | 5:+50561371 | MsG0580026980.01.T01:CDS |
| GCTGAGCTAGCTGAAGATGT+TGG | 0.571119 | 5:-50561338 | None:intergenic |
| TGAAAATGTCACTTGCCTTG+TGG | 0.592985 | 5:-50558641 | None:intergenic |
| GTGCTATGTGAAGCTCAAGT+TGG | 0.593563 | 5:+50558706 | MsG0580026980.01.T01:CDS |
| AAATATCAATTTATCCAACT+GGG | 0.598475 | 5:+50561038 | MsG0580026980.01.T01:CDS |
| GGATGGACCAAATCATTGAA+AGG | 0.605847 | 5:+50559983 | MsG0580026980.01.T01:intron |
| TATCTTGGAGATGACATGAA+GGG | 0.606299 | 5:+50560319 | MsG0580026980.01.T01:intron |
| CCGTGCTTGAGAAAATAATG+AGG | 0.615338 | 5:-50558729 | None:intergenic |
| AGCAAATGGATAATCTGAGA+AGG | 0.615870 | 5:+50560862 | MsG0580026980.01.T01:CDS |
| AATGGATAATCTGAGAAGGA+AGG | 0.617446 | 5:+50560866 | MsG0580026980.01.T01:CDS |
| TTATCTTGGAGATGACATGA+AGG | 0.626113 | 5:+50560318 | MsG0580026980.01.T01:intron |
| TTAATATTCATGGCTGATCG+AGG | 0.649738 | 5:-50561395 | None:intergenic |
| GGTGAACATGATGATCAACA+GGG | 0.738158 | 5:+50560036 | MsG0580026980.01.T01:CDS |
| AGATTGAAAACAAAACCACA+AGG | 0.751252 | 5:+50558626 | MsG0580026980.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATAAAATGAAATATTGAA+AGG | - | Chr5:50558918-50558937 | None:intergenic | 10.0% |
| !!! | AAATTTTTTAATTTGTTTTG+GGG | + | Chr5:50559047-50559066 | MsG0580026980.01.T01:intron | 10.0% |
| !! | AGTTCATAATTATGAAAATT+TGG | - | Chr5:50561363-50561382 | None:intergenic | 15.0% |
| !! | CATATATATACATACAATTA+TGG | - | Chr5:50560984-50561003 | None:intergenic | 15.0% |
| !! | TTACAAGATAAATTACAAAT+TGG | - | Chr5:50560772-50560791 | None:intergenic | 15.0% |
| !! | TTGGTAAAATATTTGTTTAT+AGG | + | Chr5:50560226-50560245 | MsG0580026980.01.T01:intron | 15.0% |
| !!! | GTAAAAAGTGTTTAATTTTT+GGG | + | Chr5:50559278-50559297 | MsG0580026980.01.T01:intron | 15.0% |
| !!! | TAAAAAGTGTTTAATTTTTG+GGG | + | Chr5:50559279-50559298 | MsG0580026980.01.T01:intron | 15.0% |
| !!! | TAAATTAATTTTAACTAACC+TGG | - | Chr5:50560414-50560433 | None:intergenic | 15.0% |
| !!! | TATGATAATATTTTATGTCA+TGG | + | Chr5:50559930-50559949 | MsG0580026980.01.T01:intron | 15.0% |
| !!! | TGTAAAAAGTGTTTAATTTT+TGG | + | Chr5:50559277-50559296 | MsG0580026980.01.T01:intron | 15.0% |
| !!! | TTTAATTTTTTTTCTGATAG+TGG | + | Chr5:50559892-50559911 | MsG0580026980.01.T01:intron | 15.0% |
| !! | AAAATATCAATTTATCCAAC+TGG | + | Chr5:50561037-50561056 | MsG0580026980.01.T01:CDS | 20.0% |
| !! | AAATATCAATTTATCCAACT+GGG | + | Chr5:50561038-50561057 | MsG0580026980.01.T01:CDS | 20.0% |
| !! | AATTTGATGGAATACTAATT+TGG | + | Chr5:50561235-50561254 | MsG0580026980.01.T01:intron | 20.0% |
| !! | ACAATATATCAATGAAACAT+AGG | + | Chr5:50560586-50560605 | MsG0580026980.01.T01:intron | 20.0% |
| !! | ATAATTATGAACTCAATACT+TGG | + | Chr5:50561370-50561389 | MsG0580026980.01.T01:CDS | 20.0% |
| !! | ATATATATTTACGCTTCATT+TGG | + | Chr5:50558790-50558809 | MsG0580026980.01.T01:intron | 20.0% |
| !! | CAATATATCAATGAAACATA+GGG | + | Chr5:50560587-50560606 | MsG0580026980.01.T01:intron | 20.0% |
| !! | CATATACATATTTGTCATAT+CGG | - | Chr5:50559557-50559576 | None:intergenic | 20.0% |
| !! | CTATTAATAGTCAATGATAA+AGG | - | Chr5:50560952-50560971 | None:intergenic | 20.0% |
| !! | GAAAATTTAACATATGATTG+AGG | - | Chr5:50560068-50560087 | None:intergenic | 20.0% |
| !! | GAAGAAATAAACTAATTACT+AGG | - | Chr5:50560446-50560465 | None:intergenic | 20.0% |
| !! | TAATTATGAACTCAATACTT+GGG | + | Chr5:50561371-50561390 | MsG0580026980.01.T01:CDS | 20.0% |
| !! | TATATATGTTGTTGTAATTC+AGG | + | Chr5:50560996-50561015 | MsG0580026980.01.T01:intron | 20.0% |
| !! | TCAAACAAATTTACAATTCT+AGG | - | Chr5:50558838-50558857 | None:intergenic | 20.0% |
| !!! | ACATTTTCAAAAAGAAAAAC+TGG | + | Chr5:50558655-50558674 | MsG0580026980.01.T01:CDS | 20.0% |
| !!! | CAAAAACAAGTATAACATTT+TGG | - | Chr5:50559863-50559882 | None:intergenic | 20.0% |
| !!! | GACATTTAATTTAATTGATC+AGG | + | Chr5:50561257-50561276 | MsG0580026980.01.T01:intron | 20.0% |
| !!! | GCTAATGTAATTAATTTTGT+TGG | + | Chr5:50560207-50560226 | MsG0580026980.01.T01:intron | 20.0% |
| !!! | TAGTAAGTGAAATTTTTTTC+AGG | + | Chr5:50559962-50559981 | MsG0580026980.01.T01:intron | 20.0% |
| !!! | TGCATATAGTTTGTTTTTTA+AGG | - | Chr5:50561155-50561174 | None:intergenic | 20.0% |
| !!! | TTGATTAATTACTTTTCTCT+AGG | + | Chr5:50559085-50559104 | MsG0580026980.01.T01:intron | 20.0% |
| !!! | TTTCTCTTAGATCTTTTTTT+TGG | + | Chr5:50558939-50558958 | MsG0580026980.01.T01:intron | 20.0% |
| ! | AATCCAGATTCAAATTCAAA+AGG | - | Chr5:50561097-50561116 | None:intergenic | 25.0% |
| ! | AGAACATAAAGTGAAGTTAT+TGG | + | Chr5:50559445-50559464 | MsG0580026980.01.T01:intron | 25.0% |
| ! | AGCGTAAATATATATATACC+TGG | - | Chr5:50558785-50558804 | None:intergenic | 25.0% |
| ! | CATTTACATCAAAAGTAACA+AGG | + | Chr5:50559759-50559778 | MsG0580026980.01.T01:intron | 25.0% |
| ! | CCAATCAATTAGTAATTTGA+TGG | + | Chr5:50561222-50561241 | MsG0580026980.01.T01:intron | 25.0% |
| ! | CCATCAAATTACTAATTGAT+TGG | - | Chr5:50561225-50561244 | None:intergenic | 25.0% |
| ! | GATGTAAATGAAAAGTAAGT+AGG | - | Chr5:50559749-50559768 | None:intergenic | 25.0% |
| ! | TAATAGTCAATGATAAAGGT+GGG | - | Chr5:50560948-50560967 | None:intergenic | 25.0% |
| ! | TTAATAGTCAATGATAAAGG+TGG | - | Chr5:50560949-50560968 | None:intergenic | 25.0% |
| ! | TTCCTGAACTTTGATTAATT+TGG | + | Chr5:50560473-50560492 | MsG0580026980.01.T01:intron | 25.0% |
| !! | TTCCTATAGTGATTTTCATA+GGG | + | Chr5:50559670-50559689 | MsG0580026980.01.T01:intron | 25.0% |
| !! | TTTCCTATAGTGATTTTCAT+AGG | + | Chr5:50559669-50559688 | MsG0580026980.01.T01:intron | 25.0% |
| !!! | AAGTGAAATTTTTTTCAGGA+TGG | + | Chr5:50559966-50559985 | MsG0580026980.01.T01:intron | 25.0% |
| !!! | ATTAATTTTAACTAACCTGG+CGG | - | Chr5:50560411-50560430 | None:intergenic | 25.0% |
| !!! | CTTGTGTTGTTATTTAACTT+TGG | + | Chr5:50559817-50559836 | MsG0580026980.01.T01:intron | 25.0% |
| AACTTTAGTGTGTTAAGACA+TGG | + | Chr5:50559498-50559517 | MsG0580026980.01.T01:intron | 30.0% | |
| AAGGTGGTAATAACATTAGT+AGG | - | Chr5:50561078-50561097 | None:intergenic | 30.0% | |
| AATCTTCAAGATTGTTTGCA+AGG | + | Chr5:50560622-50560641 | MsG0580026980.01.T01:intron | 30.0% | |
| AGATTGAAAACAAAACCACA+AGG | + | Chr5:50558626-50558645 | MsG0580026980.01.T01:CDS | 30.0% | |
| AGCCAAATTAATCAAAGTTC+AGG | - | Chr5:50560478-50560497 | None:intergenic | 30.0% | |
| AGTAAATATTCTTACCCAGT+TGG | - | Chr5:50561055-50561074 | None:intergenic | 30.0% | |
| AGTACATGTTAACTAAAGAG+AGG | - | Chr5:50560914-50560933 | None:intergenic | 30.0% | |
| AGTGAAATGTACATAATCTC+CGG | - | Chr5:50559598-50559617 | None:intergenic | 30.0% | |
| ATCTTCAAGATTGTTTGCAA+GGG | + | Chr5:50560623-50560642 | MsG0580026980.01.T01:intron | 30.0% | |
| ATGAATCCTTTATGCCTTTA+TGG | - | Chr5:50559346-50559365 | None:intergenic | 30.0% | |
| ATGTCTTAACACACTAAAGT+TGG | - | Chr5:50559499-50559518 | None:intergenic | 30.0% | |
| GATGATTTCATGTTATAAGC+CGG | + | Chr5:50559576-50559595 | MsG0580026980.01.T01:intron | 30.0% | |
| GTACATGTTAACTAAAGAGA+GGG | - | Chr5:50560913-50560932 | None:intergenic | 30.0% | |
| TCTTGTACCTTTCAATGATT+TGG | - | Chr5:50559993-50560012 | None:intergenic | 30.0% | |
| TGATGTAAACTCATTTGTAG+AGG | + | Chr5:50558864-50558883 | MsG0580026980.01.T01:intron | 30.0% | |
| ! | AAGGCATAAAGGATTCATTT+TGG | + | Chr5:50559348-50559367 | MsG0580026980.01.T01:intron | 30.0% |
| ! | GTGTCAATAATTTGTGTTGA+AGG | - | Chr5:50560810-50560829 | None:intergenic | 30.0% |
| ! | TTTCATAGTTTTTGTCGCAT+AGG | + | Chr5:50560523-50560542 | MsG0580026980.01.T01:intron | 30.0% |
| !!! | GGATCAATTTGCATTTTTTG+AGG | + | Chr5:50561314-50561333 | MsG0580026980.01.T01:CDS | 30.0% |
| AACTAACGAAGACTCCATAA+AGG | - | Chr5:50560654-50560673 | None:intergenic | 35.0% | |
| AAGTACAGGTAAACGCATTA+TGG | + | Chr5:50560014-50560033 | MsG0580026980.01.T01:CDS | 35.0% | |
| AATGGATAATCTGAGAAGGA+AGG | + | Chr5:50560866-50560885 | MsG0580026980.01.T01:CDS | 35.0% | |
| AGCAAATGGATAATCTGAGA+AGG | + | Chr5:50560862-50560881 | MsG0580026980.01.T01:CDS | 35.0% | |
| AGCCCTATGAAAATCACTAT+AGG | - | Chr5:50559675-50559694 | None:intergenic | 35.0% | |
| AGGTCAAAATTGAGAGTTTG+TGG | + | Chr5:50559779-50559798 | MsG0580026980.01.T01:intron | 35.0% | |
| AGTACAGGTAAACGCATTAT+GGG | + | Chr5:50560015-50560034 | MsG0580026980.01.T01:CDS | 35.0% | |
| AGTATTGTTCTGATTTCACC+AGG | + | Chr5:50558764-50558783 | MsG0580026980.01.T01:CDS | 35.0% | |
| ATCAATGAAACATAGGGTCT+GGG | + | Chr5:50560593-50560612 | MsG0580026980.01.T01:intron | 35.0% | |
| CCAGATTCAAATTCAAAAGG+TGG | - | Chr5:50561094-50561113 | None:intergenic | 35.0% | |
| GAAAGTCTTCGTCTTGAATT+GGG | + | Chr5:50560286-50560305 | MsG0580026980.01.T01:intron | 35.0% | |
| GGTTTACATGAACATTTCGA+GGG | + | Chr5:50559189-50559208 | MsG0580026980.01.T01:intron | 35.0% | |
| GTCTTTCATTCGATCAAACT+AGG | + | Chr5:50559469-50559488 | MsG0580026980.01.T01:intron | 35.0% | |
| TATCAATGAAACATAGGGTC+TGG | + | Chr5:50560592-50560611 | MsG0580026980.01.T01:intron | 35.0% | |
| TATCTTGGAGATGACATGAA+GGG | + | Chr5:50560319-50560338 | MsG0580026980.01.T01:intron | 35.0% | |
| TCGAGGGAAGTTATATATTC+TGG | + | Chr5:50559205-50559224 | MsG0580026980.01.T01:intron | 35.0% | |
| TGAATGAAGATGCACCATAA+AGG | + | Chr5:50559329-50559348 | MsG0580026980.01.T01:intron | 35.0% | |
| TGGTTTACATGAACATTTCG+AGG | + | Chr5:50559188-50559207 | MsG0580026980.01.T01:intron | 35.0% | |
| TTATCTTGGAGATGACATGA+AGG | + | Chr5:50560318-50560337 | MsG0580026980.01.T01:intron | 35.0% | |
| TTGGGAATTCAACGTTATCT+TGG | + | Chr5:50560304-50560323 | MsG0580026980.01.T01:intron | 35.0% | |
| ! | CCACCTTTTGAATTTGAATC+TGG | + | Chr5:50561091-50561110 | MsG0580026980.01.T01:intron | 35.0% |
| ! | CCTCATTATTTTCTCAAGCA+CGG | + | Chr5:50558729-50558748 | MsG0580026980.01.T01:CDS | 35.0% |
| ! | CTCATTATTTTCTCAAGCAC+GGG | + | Chr5:50558730-50558749 | MsG0580026980.01.T01:CDS | 35.0% |
| ! | TTTAATTGATCAGGAGCACA+AGG | + | Chr5:50561266-50561285 | MsG0580026980.01.T01:intron | 35.0% |
| CCGTGCTTGAGAAAATAATG+AGG | - | Chr5:50558732-50558751 | None:intergenic | 40.0% | |
| GATGGAAAACATGGCTGTAA+TGG | + | Chr5:50561293-50561312 | MsG0580026980.01.T01:CDS | 40.0% | |
| GGAAAGTCTTCGTCTTGAAT+TGG | + | Chr5:50560285-50560304 | MsG0580026980.01.T01:intron | 40.0% | |
| GGATGGACCAAATCATTGAA+AGG | + | Chr5:50559983-50560002 | MsG0580026980.01.T01:intron | 40.0% | |
| GGTGAACATGATGATCAACA+GGG | + | Chr5:50560036-50560055 | MsG0580026980.01.T01:CDS | 40.0% | |
| TGAACTCTCTCACACAAACA+AGG | - | Chr5:50560121-50560140 | None:intergenic | 40.0% | |
| TGAGAGAGAAATCGATGTTC+TGG | + | Chr5:50559168-50559187 | MsG0580026980.01.T01:intron | 40.0% | |
| TTCCATGACATACCATGCTA+AGG | + | Chr5:50560260-50560279 | MsG0580026980.01.T01:intron | 40.0% | |
| ! | CAAGGCAATGATGGAAAACA+TGG | + | Chr5:50561284-50561303 | MsG0580026980.01.T01:CDS | 40.0% |
| ! | GAAAGGTACAAGAGAAGTAC+AGG | + | Chr5:50560000-50560019 | MsG0580026980.01.T01:CDS | 40.0% |
| ! | GATGCACCATAAAGGCATAA+AGG | + | Chr5:50559337-50559356 | MsG0580026980.01.T01:intron | 40.0% |
| ! | TGAAAATGTCACTTGCCTTG+TGG | - | Chr5:50558644-50558663 | None:intergenic | 40.0% |
| ! | TTGCAAGGGTGTAACCTTTA+TGG | + | Chr5:50560637-50560656 | MsG0580026980.01.T01:intron | 40.0% |
| AAGACTTTCCTGCCTTAGCA+TGG | - | Chr5:50560275-50560294 | None:intergenic | 45.0% | |
| ATGACATACCATGCTAAGGC+AGG | + | Chr5:50560264-50560283 | MsG0580026980.01.T01:intron | 45.0% | |
| GGGTGAACATGATGATCAAC+AGG | + | Chr5:50560035-50560054 | MsG0580026980.01.T01:CDS | 45.0% | |
| GTGCTATGTGAAGCTCAAGT+TGG | + | Chr5:50558706-50558725 | MsG0580026980.01.T01:CDS | 45.0% | |
| TGCCTTAGCATGGTATGTCA+TGG | - | Chr5:50560265-50560284 | None:intergenic | 45.0% | |
| !!! | ATAAATTTTTTAATTTGTTT+TGG | + | Chr5:50559045-50559064 | MsG0580026980.01.T01:intron | 5.0% |
| !!! | TAAATTTTTTAATTTGTTTT+GGG | + | Chr5:50559046-50559065 | MsG0580026980.01.T01:intron | 5.0% |
| GCTGAGCTAGCTGAAGATGT+TGG | - | Chr5:50561341-50561360 | None:intergenic | 50.0% | |
| TGAGCTCATGCAGCAGCAAA+TGG | + | Chr5:50560848-50560867 | MsG0580026980.01.T01:CDS | 50.0% | |
| TGCTAAAGTTCGAAACCGCC+AGG | + | Chr5:50560393-50560412 | MsG0580026980.01.T01:CDS | 50.0% | |
| ! | TCAGGAGCACAAGGCAATGA+TGG | + | Chr5:50561275-50561294 | MsG0580026980.01.T01:intron | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr5 | gene | 50558598 | 50561410 | 50558598 | ID=MsG0580026980.01;Name=MsG0580026980.01 |
| Chr5 | mRNA | 50558598 | 50561410 | 50558598 | ID=MsG0580026980.01.T01;Parent=MsG0580026980.01;Name=MsG0580026980.01.T01;_AED=0.32;_eAED=0.35;_QI=0|0|0|1|0.4|0.66|6|0|195 |
| Chr5 | exon | 50558598 | 50558785 | 50558598 | ID=MsG0580026980.01.T01:exon:28680;Parent=MsG0580026980.01.T01 |
| Chr5 | exon | 50559984 | 50560057 | 50559984 | ID=MsG0580026980.01.T01:exon:28681;Parent=MsG0580026980.01.T01 |
| Chr5 | exon | 50560329 | 50560414 | 50560329 | ID=MsG0580026980.01.T01:exon:28682;Parent=MsG0580026980.01.T01 |
| Chr5 | exon | 50560846 | 50560887 | 50560846 | ID=MsG0580026980.01.T01:exon:28683;Parent=MsG0580026980.01.T01 |
| Chr5 | exon | 50561018 | 50561083 | 50561018 | ID=MsG0580026980.01.T01:exon:28684;Parent=MsG0580026980.01.T01 |
| Chr5 | exon | 50561279 | 50561410 | 50561279 | ID=MsG0580026980.01.T01:exon:28685;Parent=MsG0580026980.01.T01 |
| Chr5 | CDS | 50558598 | 50558785 | 50558598 | ID=MsG0580026980.01.T01:cds;Parent=MsG0580026980.01.T01 |
| Chr5 | CDS | 50559984 | 50560057 | 50559984 | ID=MsG0580026980.01.T01:cds;Parent=MsG0580026980.01.T01 |
| Chr5 | CDS | 50560329 | 50560414 | 50560329 | ID=MsG0580026980.01.T01:cds;Parent=MsG0580026980.01.T01 |
| Chr5 | CDS | 50560846 | 50560887 | 50560846 | ID=MsG0580026980.01.T01:cds;Parent=MsG0580026980.01.T01 |
| Chr5 | CDS | 50561018 | 50561083 | 50561018 | ID=MsG0580026980.01.T01:cds;Parent=MsG0580026980.01.T01 |
| Chr5 | CDS | 50561279 | 50561410 | 50561279 | ID=MsG0580026980.01.T01:cds;Parent=MsG0580026980.01.T01 |
| Gene Sequence |
| Protein sequence |
