AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580027339.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580027339.01.T01 MTR_5g055100 85.232 237 35 0 1 237 1 237 2.32e-151 421
MsG0580027339.01.T01 MTR_2g085280 78.390 236 51 0 1 236 1 236 1.49e-136 383
MsG0580027339.01.T01 MTR_2g085250 78.390 236 51 0 1 236 1 236 5.73e-136 382
MsG0580027339.01.T01 MTR_5g045560 75.105 237 59 0 1 237 1 237 1.08e-119 340
MsG0580027339.01.T01 MTR_5g053390 73.333 225 60 0 1 225 1 225 2.16e-117 335
MsG0580027339.01.T01 MTR_1g077360 68.444 225 71 0 1 225 1 225 2.65e-108 311
MsG0580027339.01.T01 MTR_1g075600 68.000 225 72 0 1 225 1 225 9.45e-108 310
MsG0580027339.01.T01 MTR_8g043650 61.181 237 92 0 1 237 1 237 3.26e-105 304
MsG0580027339.01.T01 MTR_1g105920 65.297 219 76 0 1 219 1 219 3.17e-104 301
MsG0580027339.01.T01 MTR_1g105910 60.889 225 88 0 1 225 1 225 2.84e-100 291
MsG0580027339.01.T01 MTR_2g030740 62.869 237 88 0 1 237 1 237 8.97e-100 290
MsG0580027339.01.T01 MTR_1g012570 62.869 237 88 0 1 237 1 237 7.82e-99 288
MsG0580027339.01.T01 MTR_3g052920 60.731 219 86 0 1 219 1 219 3.29e-94 276
MsG0580027339.01.T01 MTR_1g105905 59.545 220 89 0 18 237 1 220 7.95e-94 274
MsG0580027339.01.T01 MTR_3g030770 60.851 235 74 3 1 225 1 227 9.54e-94 275
MsG0580027339.01.T01 MTR_0121s0080 57.384 237 100 1 1 237 1 236 9.16e-92 270
MsG0580027339.01.T01 MTR_1g108510 59.574 235 77 3 1 225 1 227 5.71e-91 267
MsG0580027339.01.T01 MTR_2g093190 59.149 235 78 3 1 225 1 227 5.70e-88 260
MsG0580027339.01.T01 MTR_1g108580 54.852 237 94 2 1 237 1 224 1.46e-83 249
MsG0580027339.01.T01 MTR_3g052870 57.534 219 74 2 1 219 1 200 4.05e-83 247
MsG0580027339.01.T01 MTR_1g106070 62.088 182 69 0 1 182 1 182 2.37e-77 231
MsG0580027339.01.T01 MTR_7g062350 50.847 236 114 2 3 237 14 248 1.20e-75 229
MsG0580027339.01.T01 MTR_1g075570 59.551 178 58 1 18 195 1 164 1.65e-58 182
MsG0580027339.01.T01 MTR_0121s0100 64.062 128 46 0 1 128 1 128 9.76e-51 162
MsG0580027339.01.T01 MTR_3g080940 47.753 178 93 0 1 178 1 178 1.24e-49 161
MsG0580027339.01.T01 MTR_3g030780 65.487 113 39 0 1 113 1 113 5.40e-49 157
MsG0580027339.01.T01 MTR_3g067910 73.529 102 27 0 21 122 2 103 4.46e-48 154
MsG0580027339.01.T01 MTR_3g067875 89.286 56 6 0 18 73 1 56 6.34e-30 107
MsG0580027339.01.T01 MTR_8g086290 36.628 172 87 3 5 167 8 166 3.01e-27 103
MsG0580027339.01.T01 MTR_7g028448 38.961 154 82 2 5 158 8 149 7.55e-27 102
MsG0580027339.01.T01 MTR_4g036915 38.961 154 82 2 5 158 8 149 7.55e-27 102
MsG0580027339.01.T01 MTR_3g067915 54.945 91 41 0 33 123 3 93 3.22e-26 98.2
MsG0580027339.01.T01 MTR_2g105290 32.184 174 106 2 5 174 8 173 4.37e-25 97.8
MsG0580027339.01.T01 MTR_3g067870 73.016 63 17 0 16 78 83 145 9.30e-25 96.3
MsG0580027339.01.T01 MTR_1g047550 50.649 77 38 0 9 85 2 78 8.37e-23 91.7
MsG0580027339.01.T01 MTR_8g079502 53.521 71 33 0 9 79 2 72 1.35e-22 91.3
MsG0580027339.01.T01 MTR_1g108500 82.000 50 9 0 22 71 110 159 1.74e-22 94.4
MsG0580027339.01.T01 MTR_4g131030 49.367 79 40 0 9 87 2 80 4.42e-22 90.9
MsG0580027339.01.T01 MTR_8g051580 49.367 79 40 0 9 87 2 80 4.99e-21 87.0
MsG0580027339.01.T01 MTR_8g046350 34.161 161 96 3 9 165 2 156 6.45e-21 86.3
MsG0580027339.01.T01 MTR_1g054265 46.835 79 42 0 9 87 2 80 7.07e-21 86.3
MsG0580027339.01.T01 MTR_1g063160 38.679 106 63 1 9 112 2 107 3.21e-20 85.1
MsG0580027339.01.T01 MTR_4g127140 57.534 73 31 0 5 77 8 80 6.49e-19 81.6
MsG0580027339.01.T01 MTR_4g093970 45.000 100 46 2 10 101 29 127 1.05e-18 82.4
MsG0580027339.01.T01 MTR_4g094638 53.623 69 32 0 9 77 2 70 1.98e-18 80.1
MsG0580027339.01.T01 MTR_3g005530 51.471 68 33 0 9 76 2 69 3.12e-18 80.9
MsG0580027339.01.T01 MTR_4g094632 52.174 69 33 0 9 77 2 70 6.43e-18 78.2
MsG0580027339.01.T01 MTR_4g102530 50.000 72 36 0 10 81 3 74 1.16e-17 79.0
MsG0580027339.01.T01 MTR_3g452380 45.000 80 44 0 3 82 11 90 1.36e-17 79.3
MsG0580027339.01.T01 MTR_8g033270 50.633 79 37 1 9 85 2 80 3.00e-17 78.6
MsG0580027339.01.T01 MTR_1g053070 31.720 186 84 5 9 159 2 179 3.46e-17 78.6
MsG0580027339.01.T01 MTR_4g109830 52.174 69 32 1 9 76 2 70 6.77e-17 77.4
MsG0580027339.01.T01 MTR_5g066180 49.296 71 36 0 9 79 2 72 1.19e-16 76.6
MsG0580027339.01.T01 MTR_8g087860 50.000 68 34 0 9 76 18 85 2.19e-16 76.3
MsG0580027339.01.T01 MTR_7g075870 48.148 81 38 1 10 86 3 83 2.42e-16 75.5
MsG0580027339.01.T01 MTR_0003s0590 52.941 68 32 0 9 76 2 69 2.85e-16 75.9
MsG0580027339.01.T01 MTR_6g464720 52.174 69 32 1 9 76 2 70 3.54e-16 75.5
MsG0580027339.01.T01 MTR_1g101970 52.941 68 32 0 9 76 2 69 4.06e-16 74.3
MsG0580027339.01.T01 MTR_2g017865 50.000 68 34 0 9 76 17 84 4.92e-16 75.5
MsG0580027339.01.T01 MTR_8g033220 46.667 75 40 0 10 84 3 77 5.56e-16 74.7
MsG0580027339.01.T01 MTR_8g033220 46.667 75 40 0 10 84 3 77 5.88e-16 74.7
MsG0580027339.01.T01 MTR_4g084740 49.367 79 38 2 9 86 2 79 7.10e-16 75.9
MsG0580027339.01.T01 MTR_5g032150 50.000 68 34 0 9 76 2 69 8.68e-16 74.3
MsG0580027339.01.T01 MTR_2g009890 43.421 76 43 0 9 84 2 77 9.84e-16 74.7
MsG0580027339.01.T01 MTR_5g032520 50.000 68 34 0 9 76 2 69 1.07e-15 73.9
MsG0580027339.01.T01 MTR_5g031000 45.588 68 37 0 9 76 2 69 1.85e-15 73.2
MsG0580027339.01.T01 MTR_5g031000 45.588 68 37 0 9 76 2 69 2.06e-15 73.2
MsG0580027339.01.T01 MTR_3g102570 35.294 136 81 3 9 143 2 131 2.20e-15 74.3
MsG0580027339.01.T01 MTR_6g015975 50.725 69 33 1 9 76 2 70 2.33e-15 73.6
MsG0580027339.01.T01 MTR_7g016600 50.725 69 33 1 9 76 2 70 2.99e-15 73.2
MsG0580027339.01.T01 MTR_8g066260 47.826 69 35 1 9 76 2 70 3.68e-15 72.8
MsG0580027339.01.T01 MTR_7g016630 45.833 72 38 1 9 79 2 73 4.13e-15 72.8
MsG0580027339.01.T01 MTR_5g021270 51.429 70 32 1 9 76 2 71 4.57e-15 72.4
MsG0580027339.01.T01 MTR_7g075870 47.561 82 38 2 10 86 3 84 4.60e-15 72.0
MsG0580027339.01.T01 MTR_5g021270 51.429 70 32 1 9 76 2 71 4.98e-15 72.0
MsG0580027339.01.T01 MTR_5g046790 47.826 69 35 1 9 76 2 70 5.73e-15 71.6
MsG0580027339.01.T01 MTR_3g088615 47.143 70 35 1 9 76 2 71 7.11e-15 70.9
MsG0580027339.01.T01 MTR_1g038300 46.429 84 39 2 9 86 2 85 9.08e-15 71.6
MsG0580027339.01.T01 MTR_7g075850 46.341 82 41 2 9 87 2 83 1.02e-14 71.6
MsG0580027339.01.T01 MTR_1g029670 50.000 66 32 1 9 74 2 66 1.47e-14 69.7
MsG0580027339.01.T01 MTR_5g046870 49.275 69 34 1 9 76 2 70 2.03e-14 67.8
MsG0580027339.01.T01 MTR_2g461710 53.571 56 26 0 9 64 2 57 2.22e-14 66.2
MsG0580027339.01.T01 MTR_5g066960 49.123 57 29 0 9 65 2 58 4.36e-14 65.5
MsG0580027339.01.T01 MTR_3g113030 45.714 70 36 1 9 76 2 71 1.13e-13 68.6
MsG0580027339.01.T01 MTR_8g097090 47.826 69 35 1 9 76 2 70 1.88e-13 68.2
MsG0580027339.01.T01 MTR_4g109810 53.571 56 26 0 9 64 2 57 2.02e-13 67.8
MsG0580027339.01.T01 MTR_3g084980 53.571 56 26 0 9 64 2 57 2.65e-13 67.8
MsG0580027339.01.T01 MTR_4g093030 29.605 152 82 4 9 135 2 153 3.60e-13 65.5
MsG0580027339.01.T01 MTR_4g051538 27.979 193 114 7 1 181 1 180 1.35e-12 65.5
MsG0580027339.01.T01 MTR_4g036050 41.429 70 40 1 9 77 2 71 1.10e-11 62.0
MsG0580027339.01.T01 MTR_4g036050 41.429 70 40 1 9 77 2 71 1.14e-11 62.0
MsG0580027339.01.T01 MTR_4g036050 41.429 70 40 1 9 77 2 71 1.22e-11 62.0
MsG0580027339.01.T01 MTR_4g036050 41.429 70 40 1 9 77 2 71 1.29e-11 62.4
MsG0580027339.01.T01 MTR_8g022970 33.065 124 69 3 2 111 9 132 3.42e-11 60.8
MsG0580027339.01.T01 MTR_4g108720 41.558 77 43 1 9 83 2 78 8.52e-11 61.2
MsG0580027339.01.T02 MTR_5g055100 84.753 223 34 0 1 223 15 237 3.74e-141 394
MsG0580027339.01.T02 MTR_2g085280 78.829 222 47 0 1 222 15 236 6.65e-129 363
MsG0580027339.01.T02 MTR_2g085250 78.829 222 47 0 1 222 15 236 2.82e-128 362
MsG0580027339.01.T02 MTR_5g045560 74.439 223 57 0 1 223 15 237 2.16e-110 317
MsG0580027339.01.T02 MTR_5g053390 72.512 211 58 0 1 211 15 225 3.91e-108 311
MsG0580027339.01.T02 MTR_1g077360 67.299 211 69 0 1 211 15 225 7.08e-99 287
MsG0580027339.01.T02 MTR_1g075600 66.825 211 70 0 1 211 15 225 8.34e-99 287
MsG0580027339.01.T02 MTR_8g043650 60.987 223 87 0 1 223 15 237 2.87e-98 286
MsG0580027339.01.T02 MTR_1g105920 64.878 205 72 0 1 205 15 219 6.96e-96 280
MsG0580027339.01.T02 MTR_1g105905 59.545 220 89 0 4 223 1 220 9.30e-94 274
MsG0580027339.01.T02 MTR_1g105910 60.190 211 84 0 1 211 15 225 5.95e-92 270
MsG0580027339.01.T02 MTR_2g030740 61.883 223 85 0 1 223 15 237 1.10e-90 266
MsG0580027339.01.T02 MTR_1g012570 62.332 223 84 0 1 223 15 237 1.90e-90 266
MsG0580027339.01.T02 MTR_0121s0080 57.399 223 94 1 1 223 15 236 4.72e-86 254
MsG0580027339.01.T02 MTR_3g052920 60.000 205 82 0 1 205 15 219 1.05e-85 254
MsG0580027339.01.T02 MTR_3g030770 59.729 221 71 3 1 211 15 227 2.32e-85 253
MsG0580027339.01.T02 MTR_1g108510 58.371 221 74 3 1 211 15 227 1.21e-82 246
MsG0580027339.01.T02 MTR_2g093190 58.371 221 74 3 1 211 15 227 2.53e-80 240
MsG0580027339.01.T02 MTR_1g108580 54.260 223 89 2 1 223 15 224 7.48e-77 231
MsG0580027339.01.T02 MTR_7g062350 52.466 223 104 2 2 223 27 248 2.27e-75 228
MsG0580027339.01.T02 MTR_3g052870 56.585 205 70 2 1 205 15 200 1.43e-74 225
MsG0580027339.01.T02 MTR_1g106070 61.310 168 65 0 1 168 15 182 6.37e-69 209
MsG0580027339.01.T02 MTR_1g075570 59.551 178 58 1 4 181 1 164 1.34e-58 182
MsG0580027339.01.T02 MTR_3g067910 73.529 102 27 0 7 108 2 103 4.27e-48 154
MsG0580027339.01.T02 MTR_3g080940 48.171 164 85 0 1 164 15 178 1.25e-46 153
MsG0580027339.01.T02 MTR_0121s0100 62.281 114 43 0 1 114 15 128 1.43e-42 140
MsG0580027339.01.T02 MTR_3g030780 61.468 109 42 0 1 109 15 123 9.45e-41 136
MsG0580027339.01.T02 MTR_3g067875 89.286 56 6 0 4 59 1 56 4.83e-30 106
MsG0580027339.01.T02 MTR_7g028448 37.226 137 74 2 8 144 25 149 1.04e-26 101
MsG0580027339.01.T02 MTR_4g036915 37.226 137 74 2 8 144 25 149 1.04e-26 101
MsG0580027339.01.T02 MTR_3g067915 54.945 91 41 0 19 109 3 93 2.48e-26 98.2
MsG0580027339.01.T02 MTR_3g067870 73.016 63 17 0 2 64 83 145 7.58e-25 96.3
MsG0580027339.01.T02 MTR_1g108500 82.000 50 9 0 8 57 110 159 1.47e-22 94.0
MsG0580027339.01.T02 MTR_8g086290 34.568 162 84 3 1 153 18 166 3.47e-22 89.7
MsG0580027339.01.T02 MTR_2g105290 29.878 164 103 2 1 160 18 173 3.05e-20 84.7
MsG0580027339.01.T02 MTR_1g047550 55.738 61 27 0 11 71 18 78 1.85e-19 82.4
MsG0580027339.01.T02 MTR_8g079502 60.000 55 22 0 11 65 18 72 5.68e-19 81.3
MsG0580027339.01.T02 MTR_8g051580 55.556 63 28 0 11 73 18 80 8.11e-19 80.9
MsG0580027339.01.T02 MTR_4g131030 53.968 63 29 0 11 73 18 80 1.07e-18 81.3
MsG0580027339.01.T02 MTR_8g046350 34.483 145 85 3 11 151 18 156 2.61e-18 79.0
MsG0580027339.01.T02 MTR_4g127140 55.357 56 25 0 8 63 25 80 1.07e-17 78.2
MsG0580027339.01.T02 MTR_1g054265 45.205 73 40 0 1 73 8 80 1.11e-17 77.8
MsG0580027339.01.T02 MTR_1g063160 37.000 100 61 1 1 98 8 107 5.96e-17 75.9
MsG0580027339.01.T02 MTR_4g102530 50.746 67 33 0 1 67 8 74 7.59e-17 76.3
MsG0580027339.01.T02 MTR_4g093970 43.158 95 45 2 1 87 34 127 5.73e-16 74.7
MsG0580027339.01.T02 MTR_7g075870 48.684 76 35 1 1 72 8 83 2.63e-15 72.4
MsG0580027339.01.T02 MTR_8g033220 47.143 70 37 0 1 70 8 77 5.36e-15 71.6
MsG0580027339.01.T02 MTR_3g005530 48.387 62 32 0 1 62 8 69 5.44e-15 71.6
MsG0580027339.01.T02 MTR_8g033220 47.143 70 37 0 1 70 8 77 5.86e-15 71.6
MsG0580027339.01.T02 MTR_4g109830 53.968 63 28 1 1 62 8 70 9.92e-15 70.9
MsG0580027339.01.T02 MTR_6g464720 53.968 63 28 1 1 62 8 70 1.19e-14 71.2
MsG0580027339.01.T02 MTR_5g066180 28.994 169 97 4 1 149 8 173 1.37e-14 70.5
MsG0580027339.01.T02 MTR_8g033270 50.685 73 34 1 1 71 8 80 1.45e-14 70.9
MsG0580027339.01.T02 MTR_1g101970 53.226 62 29 0 1 62 8 69 2.32e-14 69.3
MsG0580027339.01.T02 MTR_1g053070 30.000 180 83 5 1 145 8 179 3.15e-14 70.1
MsG0580027339.01.T02 MTR_4g094638 49.206 63 32 0 1 63 8 70 3.20e-14 68.6
MsG0580027339.01.T02 MTR_7g075870 48.052 77 35 2 1 72 8 84 4.49e-14 68.9
MsG0580027339.01.T02 MTR_4g094632 50.000 60 30 0 4 63 11 70 6.89e-14 67.4
MsG0580027339.01.T02 MTR_5g032150 50.000 62 31 0 1 62 8 69 1.33e-13 67.8
MsG0580027339.01.T02 MTR_2g009890 41.429 70 41 0 1 70 8 77 1.57e-13 68.6
MsG0580027339.01.T02 MTR_5g032520 50.000 62 31 0 1 62 8 69 1.71e-13 67.4
MsG0580027339.01.T02 MTR_3g452380 42.647 68 39 0 1 68 23 90 2.07e-13 67.8
MsG0580027339.01.T02 MTR_5g031000 43.548 62 35 0 1 62 8 69 2.26e-13 67.4
MsG0580027339.01.T02 MTR_5g031000 43.548 62 35 0 1 62 8 69 2.32e-13 67.0
MsG0580027339.01.T02 MTR_0003s0590 50.000 62 31 0 1 62 8 69 3.17e-13 67.4
MsG0580027339.01.T02 MTR_3g102570 34.615 130 78 3 1 129 8 131 3.58e-13 67.8
MsG0580027339.01.T02 MTR_8g087860 46.774 62 33 0 1 62 24 85 3.76e-13 67.0
MsG0580027339.01.T02 MTR_4g084740 47.945 73 36 2 1 72 8 79 4.03e-13 67.8
MsG0580027339.01.T02 MTR_8g066260 49.206 63 31 1 1 62 8 70 5.35e-13 66.2
MsG0580027339.01.T02 MTR_7g016630 46.970 66 34 1 1 65 8 73 5.92e-13 66.6
MsG0580027339.01.T02 MTR_2g017865 46.774 62 33 0 1 62 23 84 9.73e-13 65.9
MsG0580027339.01.T02 MTR_6g015975 50.794 63 30 1 1 62 8 70 1.23e-12 65.5
MsG0580027339.01.T02 MTR_7g016600 50.794 63 30 1 1 62 8 70 1.48e-12 65.5
MsG0580027339.01.T02 MTR_2g461710 56.000 50 22 0 1 50 8 57 1.76e-12 60.8
MsG0580027339.01.T02 MTR_4g051538 27.485 171 99 7 9 167 23 180 2.55e-12 64.3
MsG0580027339.01.T02 MTR_5g046790 47.619 63 32 1 1 62 8 70 2.63e-12 63.9
MsG0580027339.01.T02 MTR_7g075850 46.053 76 38 2 1 73 8 83 4.15e-12 63.9
MsG0580027339.01.T02 MTR_5g021270 48.438 64 31 1 1 62 8 71 7.09e-12 63.2
MsG0580027339.01.T02 MTR_5g021270 48.438 64 31 1 1 62 8 71 7.14e-12 63.2
MsG0580027339.01.T02 MTR_3g113030 47.368 57 30 0 1 57 8 64 8.43e-12 62.8
MsG0580027339.01.T02 MTR_1g038300 43.590 78 38 2 1 72 8 85 8.90e-12 62.8
MsG0580027339.01.T02 MTR_3g088615 43.750 64 34 1 1 62 8 71 1.06e-11 61.6
MsG0580027339.01.T02 MTR_1g029670 46.667 60 31 1 1 60 8 66 1.85e-11 61.2
MsG0580027339.01.T02 MTR_5g046870 47.619 63 32 1 1 62 8 70 2.05e-11 59.3
MsG0580027339.01.T02 MTR_5g066960 47.059 51 27 0 1 51 8 58 2.16e-11 57.8
MsG0580027339.01.T02 MTR_4g093030 27.397 146 81 3 1 121 8 153 6.29e-11 59.3
MsG0580027339.01.T02 MTR_8g097090 47.619 63 32 1 1 62 8 70 8.94e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580027339.01.T01 AT5G60440 47.619 189 91 3 5 190 3 186 3.07e-48 161
MsG0580027339.01.T01 AT1G65360 39.111 225 122 6 5 223 3 218 3.73e-38 133
MsG0580027339.01.T01 AT1G01530 43.299 194 90 7 4 191 2 181 2.98e-37 131
MsG0580027339.01.T01 AT2G24840 47.531 162 72 3 9 163 63 218 6.47e-36 128
MsG0580027339.01.T01 AT4G36590 58.333 108 40 1 5 107 3 110 1.14e-33 122
MsG0580027339.01.T01 AT3G04100 35.593 118 73 1 2 116 7 124 8.90e-24 95.1
MsG0580027339.01.T01 AT1G72350 56.757 74 30 1 9 82 43 114 2.45e-21 89.0
MsG0580027339.01.T01 AT2G34440 50.704 71 35 0 9 79 2 72 5.39e-21 87.0
MsG0580027339.01.T01 AT3G66656 55.882 68 30 0 9 76 2 69 1.39e-20 85.9
MsG0580027339.01.T01 AT1G28460 28.916 166 111 2 5 163 4 169 3.98e-19 82.0
MsG0580027339.01.T01 AT4G37940 32.000 175 84 5 9 154 2 170 6.87e-19 82.4
MsG0580027339.01.T01 AT5G51870 55.556 72 32 0 5 76 21 92 8.22e-19 81.6
MsG0580027339.01.T01 AT2G45650 55.882 68 30 0 9 76 2 69 9.57e-19 82.8
MsG0580027339.01.T01 AT2G45660 54.412 68 31 0 10 77 3 70 1.01e-18 80.5
MsG0580027339.01.T01 AT1G29962 27.119 177 115 4 5 167 4 180 2.44e-18 80.1
MsG0580027339.01.T01 AT2G45660 54.412 68 31 0 10 77 3 70 2.86e-18 80.5
MsG0580027339.01.T01 AT5G51870 56.716 67 29 0 10 76 3 69 4.74e-18 79.0
MsG0580027339.01.T01 AT5G51870 56.716 67 29 0 10 76 3 69 6.14e-18 79.7
MsG0580027339.01.T01 AT4G22950 48.611 72 37 0 10 81 3 74 7.74e-18 78.6
MsG0580027339.01.T01 AT5G51870 55.714 70 31 0 7 76 10 79 8.19e-18 79.7
MsG0580027339.01.T01 AT4G09960 50.000 68 34 0 9 76 2 69 8.40e-18 79.3
MsG0580027339.01.T01 AT4G37940 31.694 183 88 6 9 154 2 184 8.56e-18 79.7
MsG0580027339.01.T01 AT5G23260 31.373 204 99 7 5 180 14 204 9.06e-18 80.5
MsG0580027339.01.T01 AT4G09960 50.000 68 34 0 9 76 3 70 9.49e-18 79.7
MsG0580027339.01.T01 AT4G09960 50.000 68 34 0 9 76 2 69 9.92e-18 79.7
MsG0580027339.01.T01 AT5G51870 56.716 67 29 0 10 76 3 69 1.10e-17 79.3
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MsG0580027339.01.T01 AT5G62165 52.239 67 32 0 10 76 3 69 8.21e-17 75.1
MsG0580027339.01.T01 AT5G62165 52.239 67 32 0 10 76 3 69 8.21e-17 75.1
MsG0580027339.01.T01 AT5G62165 52.239 67 32 0 10 76 3 69 8.21e-17 75.1
MsG0580027339.01.T01 AT5G62165 52.239 67 32 0 10 76 3 69 8.21e-17 75.1
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MsG0580027339.01.T01 AT2G22630 30.601 183 90 4 9 154 2 184 1.27e-16 76.6
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MsG0580027339.01.T01 AT2G22540 50.000 68 34 0 9 76 2 69 1.74e-16 76.3
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MsG0580027339.01.T01 AT5G62165 52.239 67 32 0 10 76 3 69 1.79e-16 75.5
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MsG0580027339.01.T01 AT5G62165 52.239 67 32 0 10 76 3 69 2.03e-16 75.5
MsG0580027339.01.T01 AT5G62165 52.239 67 32 0 10 76 3 69 2.03e-16 75.5
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MsG0580027339.01.T01 AT1G77980 42.697 89 50 1 9 96 2 90 4.90e-16 76.3
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MsG0580027339.01.T01 AT5G51860 52.239 67 32 0 10 76 3 69 6.72e-16 74.3
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MsG0580027339.01.T01 AT3G61120 51.471 68 33 0 9 76 2 69 1.53e-15 73.9
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MsG0580027339.01.T01 AT1G77950 46.053 76 39 2 9 83 2 76 1.82e-15 73.9
MsG0580027339.01.T01 AT1G77950 46.053 76 39 2 9 83 2 76 1.82e-15 73.9
MsG0580027339.01.T01 AT1G77950 46.053 76 39 2 9 83 2 76 1.82e-15 73.9
MsG0580027339.01.T01 AT5G60910 49.275 69 34 1 9 76 2 70 2.04e-15 73.6
MsG0580027339.01.T01 AT1G28450 27.811 169 112 4 5 163 4 172 2.16e-15 72.4
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MsG0580027339.01.T01 AT4G11880 48.611 72 36 1 10 80 3 74 4.03e-15 71.2
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MsG0580027339.01.T01 AT5G15800 50.725 69 33 1 9 76 2 70 5.64e-15 72.4
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MsG0580027339.01.T01 AT1G69120 46.377 69 36 1 9 76 2 70 6.67e-15 72.0
MsG0580027339.01.T01 AT1G17310 52.632 76 34 1 8 83 58 131 6.82e-15 71.6
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MsG0580027339.01.T01 AT4G11880 48.611 72 36 1 10 80 3 74 6.92e-15 71.6
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MsG0580027339.01.T01 AT2G03710 42.000 100 50 3 9 100 2 101 8.59e-15 72.0
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MsG0580027339.01.T01 AT5G65060 49.275 69 34 1 9 76 2 70 1.89e-14 69.7
MsG0580027339.01.T01 AT5G20240 47.143 70 35 1 9 76 2 71 1.93e-14 70.1
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MsG0580027339.01.T01 AT5G65070 42.169 83 44 2 9 90 2 81 4.39e-14 67.8
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MsG0580027339.01.T01 AT5G65070 42.169 83 44 2 9 90 2 81 8.56e-14 68.2
MsG0580027339.01.T01 AT3G58780 50.820 61 30 0 6 66 14 74 1.11e-13 68.6
MsG0580027339.01.T01 AT3G02310 46.377 69 36 1 9 76 2 70 1.16e-13 67.8
MsG0580027339.01.T01 AT3G58780 50.820 61 30 0 6 66 14 74 1.52e-13 68.6
MsG0580027339.01.T01 AT1G47760 33.333 102 60 1 9 102 2 103 1.68e-13 67.0
MsG0580027339.01.T01 AT5G65070 42.169 83 44 2 9 90 2 81 1.74e-13 67.8
MsG0580027339.01.T01 AT1G24260 55.357 56 25 0 9 64 2 57 1.76e-13 68.2
MsG0580027339.01.T01 AT1G24260 55.357 56 25 0 9 64 2 57 1.85e-13 68.2
MsG0580027339.01.T01 AT1G24260 55.357 56 25 0 9 64 2 57 1.89e-13 68.2
MsG0580027339.01.T01 AT5G65070 42.169 83 44 2 9 90 2 81 1.90e-13 67.4
MsG0580027339.01.T01 AT3G02310 46.377 69 36 1 9 76 2 70 2.03e-13 68.2
MsG0580027339.01.T01 AT5G65080 40.230 87 48 2 1 86 1 84 1.44e-12 64.7
MsG0580027339.01.T01 AT5G65070 49.123 57 29 0 9 65 2 58 1.78e-12 65.1
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MsG0580027339.01.T01 AT1G18750 37.662 77 46 1 9 83 2 78 1.11e-11 63.9
MsG0580027339.01.T01 AT1G18750 37.662 77 46 1 9 83 2 78 1.23e-11 63.9
MsG0580027339.01.T01 AT1G18750 37.662 77 46 1 9 83 2 78 1.27e-11 63.9
MsG0580027339.01.T01 AT5G65080 43.548 62 35 0 1 62 1 62 1.53e-11 62.0
MsG0580027339.01.T01 AT2G26320 41.892 74 41 1 5 76 14 87 3.93e-11 58.9
MsG0580027339.01.T01 AT5G49490 37.500 96 52 3 5 93 41 135 4.38e-11 62.0
MsG0580027339.01.T01 AT5G49420 37.931 87 49 2 5 86 3 89 7.08e-11 61.6
MsG0580027339.01.T01 AT1G46408 43.836 73 37 2 10 78 5 77 7.86e-11 60.8
MsG0580027339.01.T02 AT5G60440 46.369 179 88 3 1 176 13 186 9.97e-43 146
MsG0580027339.01.T02 AT2G24840 46.711 152 76 2 1 149 69 218 2.70e-33 120
MsG0580027339.01.T02 AT1G65360 38.028 213 117 6 3 209 15 218 7.72e-33 119
MsG0580027339.01.T02 AT1G01530 43.094 181 83 7 3 177 15 181 1.25e-32 119
MsG0580027339.01.T02 AT4G36590 58.163 98 36 1 1 93 13 110 1.09e-28 108
MsG0580027339.01.T02 AT3G04100 33.333 105 67 1 1 102 20 124 6.96e-18 79.0
MsG0580027339.01.T02 AT2G34440 56.364 55 24 0 11 65 18 72 8.41e-18 78.2
MsG0580027339.01.T02 AT2G45660 55.556 63 28 0 1 63 8 70 8.58e-18 77.8
MsG0580027339.01.T02 AT1G72350 55.224 67 28 1 1 67 49 113 1.00e-17 79.0
MsG0580027339.01.T02 AT3G66656 54.839 62 28 0 1 62 8 69 2.52e-17 77.0
MsG0580027339.01.T02 AT2G45660 55.556 63 28 0 1 63 8 70 3.17e-17 77.4
MsG0580027339.01.T02 AT4G37940 31.737 167 83 5 1 140 8 170 6.72e-17 76.6
MsG0580027339.01.T02 AT4G22950 47.761 67 35 0 1 67 8 74 1.71e-16 74.7
MsG0580027339.01.T02 AT2G45650 56.452 62 27 0 1 62 8 69 4.35e-16 75.1
MsG0580027339.01.T02 AT4G22950 48.485 66 34 0 1 66 8 73 6.33e-16 73.9
MsG0580027339.01.T02 AT4G22950 48.485 66 34 0 1 66 8 73 6.33e-16 73.9
MsG0580027339.01.T02 AT4G37940 30.508 177 86 6 1 140 8 184 7.03e-16 74.3
MsG0580027339.01.T02 AT5G51870 54.839 62 28 0 1 62 8 69 7.94e-16 72.8
MsG0580027339.01.T02 AT5G51870 54.839 62 28 0 1 62 8 69 8.61e-16 73.6
MsG0580027339.01.T02 AT5G51870 54.839 62 28 0 1 62 8 69 1.42e-15 73.2
MsG0580027339.01.T02 AT5G51870 54.839 62 28 0 1 62 18 79 1.92e-15 73.2
MsG0580027339.01.T02 AT5G51870 54.839 62 28 0 1 62 31 92 2.17e-15 72.0
MsG0580027339.01.T02 AT3G57230 27.273 209 101 8 1 163 8 211 4.63e-15 72.0
MsG0580027339.01.T02 AT3G57230 27.273 209 101 8 1 163 8 211 4.63e-15 72.0
MsG0580027339.01.T02 AT1G28460 26.923 156 107 2 1 149 14 169 8.14e-15 70.5
MsG0580027339.01.T02 AT1G17310 54.237 59 25 1 11 69 64 120 9.08e-15 70.9
MsG0580027339.01.T02 AT5G62165 50.000 62 31 0 1 62 8 69 1.02e-14 69.3
MsG0580027339.01.T02 AT5G62165 50.000 62 31 0 1 62 8 69 1.02e-14 69.3
MsG0580027339.01.T02 AT5G62165 50.000 62 31 0 1 62 8 69 1.02e-14 69.3
MsG0580027339.01.T02 AT3G57230 45.161 62 34 0 1 62 8 69 1.09e-14 68.9
MsG0580027339.01.T02 AT5G62165 50.000 62 31 0 1 62 8 69 1.13e-14 68.2
MsG0580027339.01.T02 AT1G17310 54.237 59 25 1 11 69 75 131 1.31e-14 70.9
MsG0580027339.01.T02 AT5G62165 50.000 62 31 0 1 62 8 69 1.39e-14 68.9
MsG0580027339.01.T02 AT5G62165 50.000 62 31 0 1 62 8 69 1.39e-14 68.9
MsG0580027339.01.T02 AT5G62165 50.000 62 31 0 1 62 8 69 1.39e-14 68.9
MsG0580027339.01.T02 AT5G62165 50.000 62 31 0 1 62 8 69 1.39e-14 68.9
MsG0580027339.01.T02 AT5G62165 50.000 62 31 0 1 62 8 69 1.39e-14 68.9
MsG0580027339.01.T02 AT2G22630 29.379 177 88 4 1 140 8 184 1.42e-14 70.5
MsG0580027339.01.T02 AT2G22630 29.379 177 88 4 1 140 8 184 1.42e-14 70.5
MsG0580027339.01.T02 AT4G09960 46.774 62 33 0 1 62 8 69 1.56e-14 70.1
MsG0580027339.01.T02 AT4G09960 46.774 62 33 0 1 62 8 69 1.69e-14 70.5
MsG0580027339.01.T02 AT4G09960 46.774 62 33 0 1 62 9 70 1.72e-14 70.5
MsG0580027339.01.T02 AT1G29962 25.749 167 110 4 1 153 14 180 2.13e-14 69.3
MsG0580027339.01.T02 AT4G09960 46.774 62 33 0 1 62 18 79 2.24e-14 70.1
MsG0580027339.01.T02 AT4G24540 53.226 62 29 0 1 62 8 69 2.42e-14 69.7
MsG0580027339.01.T02 AT3G54340 50.000 64 30 1 1 62 8 71 2.48e-14 70.1
MsG0580027339.01.T02 AT4G37940 46.774 62 33 0 1 62 8 69 2.50e-14 68.9
MsG0580027339.01.T02 AT5G62165 50.000 62 31 0 1 62 8 69 2.56e-14 69.3
MsG0580027339.01.T02 AT5G62165 50.000 62 31 0 1 62 8 69 2.56e-14 69.3
MsG0580027339.01.T02 AT4G09960 46.774 62 33 0 1 62 34 95 2.77e-14 70.1
MsG0580027339.01.T02 AT5G62165 50.000 62 31 0 1 62 8 69 2.99e-14 69.3
MsG0580027339.01.T02 AT5G62165 50.000 62 31 0 1 62 8 69 2.99e-14 69.3
MsG0580027339.01.T02 AT5G62165 50.000 62 31 0 1 62 8 69 2.99e-14 69.3
MsG0580027339.01.T02 AT5G23260 29.897 194 95 7 1 166 8 188 3.03e-14 70.1
MsG0580027339.01.T02 AT2G22540 50.000 62 31 0 1 62 8 69 3.15e-14 69.7
MsG0580027339.01.T02 AT2G22540 50.000 62 31 0 1 62 8 69 3.15e-14 69.7
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MsG0580027339.01.T02 AT3G30260 30.714 140 67 4 1 110 8 147 4.32e-14 69.7
MsG0580027339.01.T02 AT4G09960 46.774 62 33 0 1 62 103 164 4.37e-14 70.5
MsG0580027339.01.T02 AT5G51860 50.000 62 31 0 1 62 8 69 5.40e-14 68.6
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MsG0580027339.01.T02 AT5G51860 50.000 62 31 0 1 62 8 69 7.49e-14 68.2
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MsG0580027339.01.T02 AT4G11880 47.761 67 34 1 1 66 8 74 1.31e-13 67.0
MsG0580027339.01.T02 AT4G11880 47.761 67 34 1 1 66 8 74 1.31e-13 67.0
MsG0580027339.01.T02 AT5G10140 45.455 77 38 2 1 76 8 81 1.56e-13 67.0
MsG0580027339.01.T02 AT4G11880 47.761 67 34 1 1 66 8 74 1.90e-13 67.4
MsG0580027339.01.T02 AT4G11880 47.761 67 34 1 1 66 8 74 1.90e-13 67.4
MsG0580027339.01.T02 AT5G10140 45.455 77 38 2 1 76 8 81 2.03e-13 67.0
MsG0580027339.01.T02 AT5G23260 45.122 82 39 2 1 76 24 105 2.15e-13 67.8
MsG0580027339.01.T02 AT5G23260 45.122 82 39 2 1 76 8 89 2.18e-13 67.4
MsG0580027339.01.T02 AT5G10140 45.455 77 38 2 1 76 8 81 2.55e-13 66.2
MsG0580027339.01.T02 AT2G14210 47.619 63 32 1 1 62 8 70 2.63e-13 67.4
MsG0580027339.01.T02 AT5G60910 50.794 63 30 1 1 62 8 70 2.77e-13 67.4
MsG0580027339.01.T02 AT1G77980 40.964 83 48 1 1 82 8 90 2.78e-13 68.2
MsG0580027339.01.T02 AT5G13790 48.387 62 32 0 1 62 8 69 3.24e-13 67.4
MsG0580027339.01.T02 AT5G13790 48.387 62 32 0 1 62 8 69 3.30e-13 67.4
MsG0580027339.01.T02 AT2G42830 46.774 62 33 0 1 62 23 84 3.34e-13 67.0
MsG0580027339.01.T02 AT2G42830 46.774 62 33 0 1 62 23 84 3.49e-13 67.0
MsG0580027339.01.T02 AT2G14210 47.619 63 32 1 1 62 8 70 3.49e-13 67.0
MsG0580027339.01.T02 AT3G58780 46.774 62 33 0 1 62 23 84 4.01e-13 67.0
MsG0580027339.01.T02 AT4G18960 46.774 62 33 0 1 62 24 85 4.41e-13 67.0
MsG0580027339.01.T02 AT3G58780 46.774 62 33 0 1 62 29 90 4.83e-13 66.6
MsG0580027339.01.T02 AT1G22130 37.634 93 57 1 1 92 8 100 6.42e-13 67.0
MsG0580027339.01.T02 AT1G69120 47.619 63 32 1 1 62 8 70 8.24e-13 65.9
MsG0580027339.01.T02 AT3G58780 46.774 62 33 0 1 62 23 84 8.76e-13 66.2
MsG0580027339.01.T02 AT1G77950 44.286 70 37 2 1 69 8 76 1.09e-12 65.9
MsG0580027339.01.T02 AT1G77950 44.286 70 37 2 1 69 8 76 1.09e-12 65.9
MsG0580027339.01.T02 AT1G77950 44.286 70 37 2 1 69 8 76 1.09e-12 65.9
MsG0580027339.01.T02 AT1G77950 44.286 70 37 2 1 69 8 76 1.09e-12 65.9
MsG0580027339.01.T02 AT3G61120 50.000 62 31 0 1 62 8 69 1.34e-12 65.5
MsG0580027339.01.T02 AT1G69120 47.619 63 32 1 1 62 8 70 1.57e-12 65.5
MsG0580027339.01.T02 AT1G26310 46.032 63 33 1 1 62 8 70 1.98e-12 65.1
MsG0580027339.01.T02 AT5G15800 50.794 63 30 1 1 62 8 70 2.45e-12 64.7
MsG0580027339.01.T02 AT5G15800 50.794 63 30 1 1 62 8 70 4.26e-12 64.3
MsG0580027339.01.T02 AT1G71692 46.875 64 33 1 1 63 8 71 5.56e-12 63.2
MsG0580027339.01.T02 AT2G03710 40.426 94 48 3 1 86 8 101 5.80e-12 62.8
MsG0580027339.01.T02 AT2G22540 58.000 50 21 0 1 50 8 57 6.62e-12 63.2
MsG0580027339.01.T02 AT2G03710 40.426 94 48 3 1 86 8 101 8.67e-12 63.2
MsG0580027339.01.T02 AT2G03710 40.426 94 48 3 1 86 8 101 8.92e-12 63.2
MsG0580027339.01.T02 AT5G65050 47.619 63 32 1 1 62 8 70 1.06e-11 61.6
MsG0580027339.01.T02 AT5G65050 47.619 63 32 1 1 62 8 70 1.70e-11 61.2
MsG0580027339.01.T02 AT5G65050 47.619 63 32 1 1 62 8 70 1.83e-11 61.2
MsG0580027339.01.T02 AT5G20240 43.750 64 34 1 1 62 8 71 2.66e-11 60.1
MsG0580027339.01.T02 AT5G20240 43.750 64 34 1 1 62 8 71 2.84e-11 61.2
MsG0580027339.01.T02 AT1G28450 25.786 159 108 4 1 149 14 172 3.97e-11 60.5
MsG0580027339.01.T02 AT3G02310 46.032 63 33 1 1 62 8 70 4.72e-11 60.5
MsG0580027339.01.T02 AT5G65060 47.619 63 32 1 1 62 8 70 5.16e-11 60.1
MsG0580027339.01.T02 AT1G24260 56.000 50 22 0 1 50 8 57 7.69e-11 60.5
MsG0580027339.01.T02 AT3G02310 46.032 63 33 1 1 62 8 70 8.89e-11 60.5

Find 53 sgRNAs with CRISPR-Local

Find 57 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTGCATGATGTCATCATTT+TGG 0.109779 5:+58671735 None:intergenic
GACCTTATTCATCTCATAAA+TGG 0.175011 5:+58671565 None:intergenic
TCTATGATCGTTTCAACATT+TGG 0.289536 5:+58671782 None:intergenic
GCTGAATCTTGTTGAGGATT+TGG 0.301044 5:+58671392 None:intergenic
GAACCATTTACAGCATAAAA+TGG 0.303131 5:+58671443 None:intergenic
CAGCATAAAATGGAAGGGTT+TGG 0.310468 5:+58671453 None:intergenic
TTGTTGAAACCAAACAAATA+AGG 0.314433 5:+58671332 None:intergenic
ATGTTGCAACCTTATTTGTT+TGG 0.345480 5:-58671341 MsG0580027339.01.T01:CDS
AGCATAAAATGGAAGGGTTT+GGG 0.356036 5:+58671454 None:intergenic
TTGTTTGGTTTCAACAATAT+AGG 0.376703 5:-58671326 MsG0580027339.01.T01:CDS
TGAATTATACAAGAAGGCTT+TGG 0.386209 5:-58671537 MsG0580027339.01.T01:CDS
ACCTTATTCATCTCATAAAT+GGG 0.419947 5:+58671566 None:intergenic
TCCCATTTATGAGATGAATA+AGG 0.420859 5:-58671567 MsG0580027339.01.T01:CDS
AGTGAGCTTTGCACCCTTTG+TGG 0.424656 5:-58671863 MsG0580027339.01.T01:CDS
AACAAATAAGGTTGCAACAT+AGG 0.449382 5:+58671344 None:intergenic
CCTGATTTATCTTTCGCACC+TGG 0.470215 5:+58671609 None:intergenic
CCAGGTGCGAAAGATAAATC+AGG 0.478066 5:-58671609 MsG0580027339.01.T01:CDS
CCTTCTTGTATAATTCAAGT+TGG 0.484620 5:+58671543 None:intergenic
ACAAATAAGGTTGCAACATA+GGG 0.494926 5:+58671345 None:intergenic
TGACATCATGCAATTAATTG+AGG 0.500210 5:-58671726 MsG0580027339.01.T01:CDS
GCTCGCGCACCTTGGCTCTA+CGG 0.510044 5:+58671699 None:intergenic
TTCAACAATATAGGAGAAGA+AGG 0.511518 5:-58671317 MsG0580027339.01.T01:CDS
ATTATACAAGAAGGCTTTGG+AGG 0.515397 5:-58671534 MsG0580027339.01.T01:CDS
AGCAATATATGCACCACAAA+GGG 0.515612 5:+58671850 None:intergenic
GAAGGTGGACATGGTCCCCA+TGG 0.528388 5:-58671299 MsG0580027339.01.T01:CDS
GCCCATATCAAAAGAACCCA+TGG 0.534752 5:+58671282 None:intergenic
GCCAAGGTGCGCGAGCTCAA+TGG 0.535008 5:-58671692 MsG0580027339.01.T01:CDS
ACCATTGAGCTCGCGCACCT+TGG 0.535093 5:+58671691 None:intergenic
CCAACTTGAATTATACAAGA+AGG 0.537115 5:-58671543 MsG0580027339.01.T01:CDS
GAGCTCAATGGTATATTGAC+TGG 0.544330 5:-58671680 MsG0580027339.01.T01:CDS
CTTTCTCGAAGCGCCGTAGT+GGG 0.553366 5:-58671901 MsG0580027339.01.T01:CDS
CATTTACAGCATAAAATGGA+AGG 0.557866 5:+58671447 None:intergenic
CCGTGAGAATGAGCTAATCC+AGG 0.557926 5:-58671627 MsG0580027339.01.T01:CDS
GGATTTGGCTGATGCTCAAG+AGG 0.568099 5:+58671407 None:intergenic
ACTTTCTCGAAGCGCCGTAG+TGG 0.571963 5:-58671902 MsG0580027339.01.T01:CDS
TGCTGATGGAGTTGAAATGC+AGG 0.574822 5:-58671486 MsG0580027339.01.T01:CDS
ATTTACAGCATAAAATGGAA+GGG 0.584369 5:+58671448 None:intergenic
CTTGTTGCACAACATGCTGA+TGG 0.603499 5:-58671500 MsG0580027339.01.T01:CDS
CCCATATCAAAAGAACCCAT+GGG 0.612341 5:+58671283 None:intergenic
AATGAAAATACTTTCTCACT+AGG 0.614392 5:+58671812 None:intergenic
TGTGCTTTAGCCATGTCAAG+CGG 0.619256 5:-58671992 None:intergenic
ATAGGAGAAGAAGGTGGACA+TGG 0.621762 5:-58671308 MsG0580027339.01.T01:CDS
AAGGTGGACATGGTCCCCAT+GGG 0.627258 5:-58671298 MsG0580027339.01.T01:CDS
CCTGGATTAGCTCATTCTCA+CGG 0.627343 5:+58671627 None:intergenic
CTTTCTTGAAGAGCCCACTA+CGG 0.627906 5:+58671888 None:intergenic
GAGCAATATATGCACCACAA+AGG 0.629097 5:+58671849 None:intergenic
GGAAAGGCTGAATCTTGTTG+AGG 0.638066 5:+58671386 None:intergenic
TGAGGATTACCGTAGAGCCA+AGG 0.649629 5:-58671708 MsG0580027339.01.T01:CDS
ATGCTCAAGAGGAATGCTAG+AGG 0.682270 5:+58671418 None:intergenic
TCAAGCGGAAAGAAAACACA+AGG 0.684671 5:-58671977 MsG0580027339.01.T01:CDS
AACAATATAGGAGAAGAAGG+TGG 0.684766 5:-58671314 MsG0580027339.01.T01:CDS
CCATATCAAAAGAACCCATG+GGG 0.712233 5:+58671284 None:intergenic
GCTGATGGAGTTGAAATGCA+GGG 0.727418 5:-58671485 MsG0580027339.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! AATGAAAATACTTTCTCACT+AGG + Chr5:58671460-58671479 None:intergenic 25.0%
! ACCTTATTCATCTCATAAAT+GGG + Chr5:58671706-58671725 None:intergenic 25.0%
! ATTTACAGCATAAAATGGAA+GGG + Chr5:58671824-58671843 None:intergenic 25.0%
! TTGTTGAAACCAAACAAATA+AGG + Chr5:58671940-58671959 None:intergenic 25.0%
!! AGATAAATCAGGAACATTTT+TGG - Chr5:58671671-58671690 MsG0580027339.01.T01:CDS 25.0%
!! TTGTTTGGTTTCAACAATAT+AGG - Chr5:58671943-58671962 MsG0580027339.01.T01:CDS 25.0%
!!! AGTGAGAAAGTATTTTCATT+TGG - Chr5:58671460-58671479 MsG0580027339.01.T01:CDS 25.0%
AACAAATAAGGTTGCAACAT+AGG + Chr5:58671928-58671947 None:intergenic 30.0%
ACAAATAAGGTTGCAACATA+GGG + Chr5:58671927-58671946 None:intergenic 30.0%
CATTTACAGCATAAAATGGA+AGG + Chr5:58671825-58671844 None:intergenic 30.0%
CCAACTTGAATTATACAAGA+AGG - Chr5:58671726-58671745 MsG0580027339.01.T01:CDS 30.0%
CCTTCTTGTATAATTCAAGT+TGG + Chr5:58671729-58671748 None:intergenic 30.0%
GAACCATTTACAGCATAAAA+TGG + Chr5:58671829-58671848 None:intergenic 30.0%
GACCTTATTCATCTCATAAA+TGG + Chr5:58671707-58671726 None:intergenic 30.0%
TCCCATTTATGAGATGAATA+AGG - Chr5:58671702-58671721 MsG0580027339.01.T01:CDS 30.0%
TCTATGATCGTTTCAACATT+TGG + Chr5:58671490-58671509 None:intergenic 30.0%
TGAATTATACAAGAAGGCTT+TGG - Chr5:58671732-58671751 MsG0580027339.01.T01:CDS 30.0%
TGACATCATGCAATTAATTG+AGG - Chr5:58671543-58671562 MsG0580027339.01.T01:CDS 30.0%
TTCAACAATATAGGAGAAGA+AGG - Chr5:58671952-58671971 MsG0580027339.01.T01:CDS 30.0%
! ATGTTGCAACCTTATTTGTT+TGG - Chr5:58671928-58671947 MsG0580027339.01.T01:CDS 30.0%
! ATTGCATGATGTCATCATTT+TGG + Chr5:58671537-58671556 None:intergenic 30.0%
! CTTCCATTTTATGCTGTAAA+TGG - Chr5:58671823-58671842 MsG0580027339.01.T01:CDS 30.0%
! TTGCATGATGTCATCATTTT+GGG + Chr5:58671536-58671555 None:intergenic 30.0%
!! TAAATCAGGAACATTTTTGG+CGG - Chr5:58671674-58671693 MsG0580027339.01.T01:CDS 30.0%
AACAATATAGGAGAAGAAGG+TGG - Chr5:58671955-58671974 MsG0580027339.01.T01:CDS 35.0%
AGCAATATATGCACCACAAA+GGG + Chr5:58671422-58671441 None:intergenic 35.0%
AGCATAAAATGGAAGGGTTT+GGG + Chr5:58671818-58671837 None:intergenic 35.0%
CTCAAAAAACTCTGATGGAA+AGG + Chr5:58671902-58671921 None:intergenic 35.0%
! ATTATACAAGAAGGCTTTGG+AGG - Chr5:58671735-58671754 MsG0580027339.01.T01:CDS 35.0%
CAGCATAAAATGGAAGGGTT+TGG + Chr5:58671819-58671838 None:intergenic 40.0%
GAGCAATATATGCACCACAA+AGG + Chr5:58671423-58671442 None:intergenic 40.0%
GAGCTCAATGGTATATTGAC+TGG - Chr5:58671589-58671608 MsG0580027339.01.T01:CDS 40.0%
GCTGAATCTTGTTGAGGATT+TGG + Chr5:58671880-58671899 None:intergenic 40.0%
GGGTTCTCAAAAAACTCTGA+TGG + Chr5:58671907-58671926 None:intergenic 40.0%
TCAAGCGGAAAGAAAACACA+AGG - Chr5:58671292-58671311 MsG0580027339.01.T01:CDS 40.0%
! ATGATGTCATCATTTTGGGC+TGG + Chr5:58671532-58671551 None:intergenic 40.0%
ATAGGAGAAGAAGGTGGACA+TGG - Chr5:58671961-58671980 MsG0580027339.01.T01:CDS 45.0%
ATGCTCAAGAGGAATGCTAG+AGG + Chr5:58671854-58671873 None:intergenic 45.0%
CCAGGTGCGAAAGATAAATC+AGG - Chr5:58671660-58671679 MsG0580027339.01.T01:CDS 45.0%
CCTGATTTATCTTTCGCACC+TGG + Chr5:58671663-58671682 None:intergenic 45.0%
CTTGTTGCACAACATGCTGA+TGG - Chr5:58671769-58671788 MsG0580027339.01.T01:CDS 45.0%
CTTTCTTGAAGAGCCCACTA+CGG + Chr5:58671384-58671403 None:intergenic 45.0%
GCTGATGGAGTTGAAATGCA+GGG - Chr5:58671784-58671803 MsG0580027339.01.T01:CDS 45.0%
GGAAAGGCTGAATCTTGTTG+AGG + Chr5:58671886-58671905 None:intergenic 45.0%
TGCTGATGGAGTTGAAATGC+AGG - Chr5:58671783-58671802 MsG0580027339.01.T01:CDS 45.0%
!! CCTGGATTAGCTCATTCTCA+CGG + Chr5:58671645-58671664 None:intergenic 45.0%
AGTGAGCTTTGCACCCTTTG+TGG - Chr5:58671406-58671425 MsG0580027339.01.T01:CDS 50.0%
CCGTGAGAATGAGCTAATCC+AGG - Chr5:58671642-58671661 MsG0580027339.01.T01:CDS 50.0%
GGATTTGGCTGATGCTCAAG+AGG + Chr5:58671865-58671884 None:intergenic 50.0%
TGAGGATTACCGTAGAGCCA+AGG - Chr5:58671561-58671580 MsG0580027339.01.T01:CDS 50.0%
AAGGTGGACATGGTCCCCAT+GGG - Chr5:58671971-58671990 MsG0580027339.01.T01:CDS 55.0%
!! ACTTTCTCGAAGCGCCGTAG+TGG - Chr5:58671367-58671386 MsG0580027339.01.T01:CDS 55.0%
!! CTTTCTCGAAGCGCCGTAGT+GGG - Chr5:58671368-58671387 MsG0580027339.01.T01:CDS 55.0%
ACCATTGAGCTCGCGCACCT+TGG + Chr5:58671581-58671600 None:intergenic 60.0%
GAAGGTGGACATGGTCCCCA+TGG - Chr5:58671970-58671989 MsG0580027339.01.T01:CDS 60.0%
GCCAAGGTGCGCGAGCTCAA+TGG - Chr5:58671577-58671596 MsG0580027339.01.T01:CDS 65.0%
!! GCTCGCGCACCTTGGCTCTA+CGG + Chr5:58671573-58671592 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr5 gene 58671289 58672002 58671289 ID=MsG0580027339.01;Name=MsG0580027339.01
Chr5 mRNA 58671289 58672002 58671289 ID=MsG0580027339.01.T01;Parent=MsG0580027339.01;Name=MsG0580027339.01.T01;_AED=0.01;_eAED=0.01;_QI=0|-1|0|1|-1|1|1|0|237
Chr5 exon 58671289 58672002 58671289 ID=MsG0580027339.01.T01:exon:13200;Parent=MsG0580027339.01.T01
Chr5 CDS 58671289 58672002 58671289 ID=MsG0580027339.01.T01:cds;Parent=MsG0580027339.01.T01
Chr5 mRNA 58671289 58671960 58671289 ID=MsG0580027339.01.T02;Parent=MsG0580027339.01;Name=MsG0580027339.01.T02;_AED=0.04;_eAED=0.04;_QI=0|-1|0|1|-1|0|1|0|223
Chr5 exon 58671289 58671960 58671289 ID=MsG0580027339.01.T02:exon:13201;Parent=MsG0580027339.01.T02
Chr5 CDS 58671289 58671960 58671289 ID=MsG0580027339.01.T02:cds;Parent=MsG0580027339.01.T02
Gene Sequence

>MsG0580027339.01.T01

ATGTCAAGCGGAAAGAAAACACAAGGTCGTAAAAAGATTGAGATGAAAAAGATGAGCAATGAAAGCAACTTGCAAGTGACTTTCTCGAAGCGCCGTAGTGGGCTCTTCAAGAAAGCTAGTGAGCTTTGCACCCTTTGTGGTGCATATATTGCTCTAATTATATTCTCACCTAGTGAGAAAGTATTTTCATTTGGTCATCCAAATGTTGAAACGATCATAGATCGTTATCTCTCTCAAGTTCCAGCCCAAAATGATGACATCATGCAATTAATTGAGGATTACCGTAGAGCCAAGGTGCGCGAGCTCAATGGTATATTGACTGGTATGAAAGATGCAATCTGCATCGATAAGAACCGTGAGAATGAGCTAATCCAGGTGCGAAAGATAAATCAGGAACATTTTTGGCGGACTCGTCCCATTTATGAGATGAATAAGGTCCAACTTGAATTATACAAGAAGGCTTTGGAGGATCTTCTGAAACTTGTTGCACAACATGCTGATGGAGTTGAAATGCAGGGTACTTCTACCCAAACCCTTCCATTTTATGCTGTAAATGGTTCATCCTCTAGCATTCCTCTTGAGCATCAGCCAAATCCTCAACAAGATTCAGCCTTTCCATCAGAGTTTTTTGAGAACCCTATGTTGCAACCTTATTTGTTTGGTTTCAACAATATAGGAGAAGAAGGTGGACATGGTCCCCATGGGTTCTTTTGA

>MsG0580027339.01.T02

ATGAAAAAGATGAGCAATGAAAGCAACTTGCAAGTGACTTTCTCGAAGCGCCGTAGTGGGCTCTTCAAGAAAGCTAGTGAGCTTTGCACCCTTTGTGGTGCATATATTGCTCTAATTATATTCTCACCTAGTGAGAAAGTATTTTCATTTGGTCATCCAAATGTTGAAACGATCATAGATCGTTATCTCTCTCAAGTTCCAGCCCAAAATGATGACATCATGCAATTAATTGAGGATTACCGTAGAGCCAAGGTGCGCGAGCTCAATGGTATATTGACTGGTATGAAAGATGCAATCTGCATCGATAAGAACCGTGAGAATGAGCTAATCCAGGTGCGAAAGATAAATCAGGAACATTTTTGGCGGACTCGTCCCATTTATGAGATGAATAAGGTCCAACTTGAATTATACAAGAAGGCTTTGGAGGATCTTCTGAAACTTGTTGCACAACATGCTGATGGAGTTGAAATGCAGGGTACTTCTACCCAAACCCTTCCATTTTATGCTGTAAATGGTTCATCCTCTAGCATTCCTCTTGAGCATCAGCCAAATCCTCAACAAGATTCAGCCTTTCCATCAGAGTTTTTTGAGAACCCTATGTTGCAACCTTATTTGTTTGGTTTCAACAATATAGGAGAAGAAGGTGGACATGGTCCCCATGGGTTCTTTTGA

Protein sequence

>MsG0580027339.01.T01

MSSGKKTQGRKKIEMKKMSNESNLQVTFSKRRSGLFKKASELCTLCGAYIALIIFSPSEKVFSFGHPNVETIIDRYLSQVPAQNDDIMQLIEDYRRAKVRELNGILTGMKDAICIDKNRENELIQVRKINQEHFWRTRPIYEMNKVQLELYKKALEDLLKLVAQHADGVEMQGTSTQTLPFYAVNGSSSSIPLEHQPNPQQDSAFPSEFFENPMLQPYLFGFNNIGEEGGHGPHGFF*

>MsG0580027339.01.T02

MKKMSNESNLQVTFSKRRSGLFKKASELCTLCGAYIALIIFSPSEKVFSFGHPNVETIIDRYLSQVPAQNDDIMQLIEDYRRAKVRELNGILTGMKDAICIDKNRENELIQVRKINQEHFWRTRPIYEMNKVQLELYKKALEDLLKLVAQHADGVEMQGTSTQTLPFYAVNGSSSSIPLEHQPNPQQDSAFPSEFFENPMLQPYLFGFNNIGEEGGHGPHGFF*