AlfalfaGEDB | MsG0580027502.01

M. sativa cultivar ZhongmuNo.1 / MsG0580027502.01

KEGG: K14431
GO: GO:0006351 GO:0043565
PFAM: PF14144

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580027502.01.T01	XP_024640007.1	70.031	327	46	5	25	318	9	316	2.23E-145	427
MsG0580027502.01.T01	XP_024640007.1	69.681	188	27	2	25	201	224	392	8.08E-78	255
MsG0580027502.01.T01	XP_024640007.1	80	95	19	0	224	318	7	101	4.86E-41	159

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580027502.01.T01	Q93ZE2	45.503	189	72	2	25	201	150	319	5.46E-44	157

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580027502.01.T01	A0A396HU17	68.047	338	33	7	25	318	9	315	1.27e-143	422

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0580027502.01	MsG0680030656.01	0.820479	6.711642e-53	5.316519e-50

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580027502.01.T01	MTR_5g060950	71.809	188	23	2	25	201	134	302	6.29e-84	258
MsG0580027502.01.T01	MTR_5g060950	79.412	102	21	0	225	326	133	234	5.54e-50	170
MsG0580027502.01.T01	MTR_3g073560	52.941	187	58	2	26	201	133	300	9.50e-56	191
MsG0580027502.01.T01	MTR_3g073560	37.931	232	120	7	98	318	6	224	1.82e-36	138
MsG0580027502.01.T01	MTR_3g087940	43.850	187	75	2	26	201	147	314	1.61e-42	151
MsG0580027502.01.T01	MTR_3g087940	54.545	99	45	0	220	318	140	238	8.13e-33	125
MsG0580027502.01.T01	MTR_8g040120	38.660	194	82	2	26	201	245	419	1.74e-34	131
MsG0580027502.01.T01	MTR_8g040120	47.826	92	48	0	227	318	245	336	2.14e-22	97.8
MsG0580027502.01.T01	MTR_7g089800	37.113	194	85	3	26	201	202	376	4.92e-33	127
MsG0580027502.01.T01	MTR_7g089800	45.263	95	52	0	227	321	202	296	4.59e-23	99.4
MsG0580027502.01.T01	MTR_7g089800	37.113	194	85	3	26	201	231	405	9.27e-33	126
MsG0580027502.01.T01	MTR_7g089800	45.263	95	52	0	227	321	231	325	6.44e-23	99.0
MsG0580027502.01.T01	MTR_8g091650	39.785	186	82	2	27	201	70	236	8.92e-32	120
MsG0580027502.01.T01	MTR_8g091650	52.747	91	43	0	228	318	70	160	4.17e-24	100
MsG0580027502.01.T01	MTR_7g092750	36.041	197	89	3	28	209	146	320	4.96e-31	120
MsG0580027502.01.T01	MTR_7g092750	37.500	104	65	0	225	328	142	245	1.78e-17	82.8
MsG0580027502.01.T01	MTR_8g091650	39.785	186	82	2	27	201	143	309	5.10e-31	120
MsG0580027502.01.T01	MTR_8g091650	52.747	91	43	0	228	318	143	233	2.07e-23	99.4
MsG0580027502.01.T01	MTR_8g091650	39.785	186	82	2	27	201	179	345	5.33e-31	120
MsG0580027502.01.T01	MTR_8g091650	52.747	91	43	0	228	318	179	269	2.12e-23	99.8
MsG0580027502.01.T01	MTR_7g092750	36.041	197	89	3	28	209	247	421	2.81e-30	120
MsG0580027502.01.T01	MTR_7g092750	37.500	104	65	0	225	328	243	346	4.98e-17	82.0
MsG0580027502.01.T01	MTR_1g111310	34.848	198	93	3	25	208	489	664	5.84e-29	117
MsG0580027502.01.T01	MTR_1g111310	34.715	193	90	3	30	208	119	289	3.27e-28	115
MsG0580027502.01.T01	MTR_1g111310	37.864	103	61	1	216	318	107	206	5.94e-19	88.2
MsG0580027502.01.T01	MTR_1g111310	39.362	94	57	0	225	318	488	581	2.21e-18	86.7
MsG0580027502.01.T01	MTR_0126s0080	34.500	200	97	2	28	212	290	470	1.09e-27	112
MsG0580027502.01.T01	MTR_0126s0080	40.179	112	67	0	217	328	278	389	5.62e-17	82.0
MsG0580027502.01.T01	MTR_4g053250	35.870	184	86	3	26	198	249	411	1.48e-26	109
MsG0580027502.01.T01	MTR_4g053250	42.553	94	54	0	225	318	247	340	2.25e-19	89.0
MsG0580027502.01.T01	MTR_2g086420	34.574	188	91	3	25	201	256	422	2.08e-26	109
MsG0580027502.01.T01	MTR_2g086420	43.478	92	52	0	225	316	255	346	5.14e-20	90.9
MsG0580027502.01.T01	MTR_2g086420	34.574	188	91	3	25	201	255	421	2.32e-26	109
MsG0580027502.01.T01	MTR_2g086420	43.478	92	52	0	225	316	254	345	5.63e-20	90.9
MsG0580027502.01.T01	MTR_5g054900	32.984	191	91	2	26	198	128	299	3.11e-26	107
MsG0580027502.01.T01	MTR_5g054900	42.391	92	53	0	227	318	128	219	1.20e-18	85.9
MsG0580027502.01.T01	MTR_5g054900	32.984	191	91	2	26	198	132	303	4.33e-26	106
MsG0580027502.01.T01	MTR_5g054900	42.391	92	53	0	227	318	132	223	1.39e-18	85.9
MsG0580027502.01.T01	MTR_5g054900	32.984	191	91	2	26	198	213	384	9.28e-26	107
MsG0580027502.01.T01	MTR_5g054900	42.391	92	53	0	227	318	213	304	2.02e-18	85.9
MsG0580027502.01.T01	MTR_5g054900	32.984	191	91	2	26	198	239	410	1.02e-25	107
MsG0580027502.01.T01	MTR_5g054900	42.391	92	53	0	227	318	239	330	2.17e-18	85.9
MsG0580027502.01.T01	MTR_7g092750	33.516	182	88	4	28	209	247	395	5.86e-20	90.5
MsG0580027502.01.T01	MTR_7g092750	39.130	92	56	0	225	316	243	334	2.38e-16	79.7
MsG0580027502.01.T01	MTR_3g044820	37.864	103	63	1	214	315	106	208	2.48e-19	85.1
MsG0580027502.01.T01	MTR_3g044820	39.560	91	54	1	25	114	118	208	1.23e-18	83.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580027502.01.T01	AT1G77920	45.503	189	72	2	25	201	150	319	5.56e-45	157
MsG0580027502.01.T01	AT1G77920	61.702	94	36	0	225	318	149	242	2.07e-32	124
MsG0580027502.01.T01	AT1G22070	44.211	190	74	2	25	201	165	335	2.28e-44	156
MsG0580027502.01.T01	AT1G22070	57.447	94	40	0	225	318	164	257	1.16e-30	119
MsG0580027502.01.T01	AT5G10030	45.408	196	74	3	25	209	147	320	1.64e-43	154
MsG0580027502.01.T01	AT5G10030	55.856	111	44	1	225	330	146	256	2.28e-31	121
MsG0580027502.01.T01	AT5G10030	45.408	196	74	3	25	209	147	320	1.64e-43	154
MsG0580027502.01.T01	AT5G10030	55.856	111	44	1	225	330	146	256	2.28e-31	121
MsG0580027502.01.T01	AT5G10030	45.408	196	74	3	25	209	147	320	1.64e-43	154
MsG0580027502.01.T01	AT5G10030	55.856	111	44	1	225	330	146	256	2.28e-31	121
MsG0580027502.01.T01	AT5G10030	45.408	196	74	3	25	209	147	320	1.64e-43	154
MsG0580027502.01.T01	AT5G10030	55.856	111	44	1	225	330	146	256	2.28e-31	121
MsG0580027502.01.T01	AT5G10030	45.408	196	74	3	25	209	147	320	1.64e-43	154
MsG0580027502.01.T01	AT5G10030	55.856	111	44	1	225	330	146	256	2.28e-31	121
MsG0580027502.01.T01	AT5G65210	43.077	195	78	3	26	209	82	254	1.67e-41	146
MsG0580027502.01.T01	AT5G65210	53.211	109	46	1	227	330	82	190	2.14e-30	117
MsG0580027502.01.T01	AT5G65210	42.564	195	79	3	26	209	152	324	1.18e-40	146
MsG0580027502.01.T01	AT5G65210	52.252	111	48	1	225	330	150	260	1.07e-29	117
MsG0580027502.01.T01	AT5G65210	42.564	195	79	3	26	209	152	324	1.18e-40	146
MsG0580027502.01.T01	AT5G65210	52.252	111	48	1	225	330	150	260	1.07e-29	117
MsG0580027502.01.T01	AT5G65210	42.564	195	79	3	26	209	152	324	1.18e-40	146
MsG0580027502.01.T01	AT5G65210	52.252	111	48	1	225	330	150	260	1.07e-29	117
MsG0580027502.01.T01	AT5G65210	42.564	195	79	3	26	209	152	324	1.18e-40	146
MsG0580027502.01.T01	AT5G65210	52.252	111	48	1	225	330	150	260	1.07e-29	117
MsG0580027502.01.T01	AT5G65210	42.564	195	79	3	26	209	152	324	1.18e-40	146
MsG0580027502.01.T01	AT5G65210	52.252	111	48	1	225	330	150	260	1.07e-29	117
MsG0580027502.01.T01	AT5G65210	42.564	195	79	3	26	209	152	324	1.18e-40	146
MsG0580027502.01.T01	AT5G65210	52.252	111	48	1	225	330	150	260	1.07e-29	117
MsG0580027502.01.T01	AT5G06960	35.751	193	88	2	26	201	90	263	2.82e-33	125
MsG0580027502.01.T01	AT5G06960	43.478	92	52	0	227	318	90	181	7.34e-21	91.7
MsG0580027502.01.T01	AT5G06960	35.751	193	88	2	26	201	110	283	4.28e-33	125
MsG0580027502.01.T01	AT5G06960	43.478	92	52	0	227	318	110	201	1.15e-20	91.3
MsG0580027502.01.T01	AT5G06960	35.751	193	88	2	26	201	110	283	4.28e-33	125
MsG0580027502.01.T01	AT5G06960	43.478	92	52	0	227	318	110	201	1.15e-20	91.3
MsG0580027502.01.T01	AT5G06950	35.751	193	88	2	26	201	110	283	8.56e-33	124
MsG0580027502.01.T01	AT5G06950	45.652	92	50	0	227	318	110	201	1.03e-21	94.4
MsG0580027502.01.T01	AT5G06950	35.751	193	88	2	26	201	110	283	8.56e-33	124
MsG0580027502.01.T01	AT5G06950	45.652	92	50	0	227	318	110	201	1.03e-21	94.4
MsG0580027502.01.T01	AT5G06950	35.751	193	88	2	26	201	110	283	8.56e-33	124
MsG0580027502.01.T01	AT5G06950	45.652	92	50	0	227	318	110	201	1.03e-21	94.4
MsG0580027502.01.T01	AT5G06950	35.751	193	88	2	26	201	110	283	8.56e-33	124
MsG0580027502.01.T01	AT5G06950	45.652	92	50	0	227	318	110	201	1.03e-21	94.4
MsG0580027502.01.T01	AT5G06950	35.751	193	88	2	26	201	110	283	8.56e-33	124
MsG0580027502.01.T01	AT5G06950	45.652	92	50	0	227	318	110	201	1.03e-21	94.4
MsG0580027502.01.T01	AT3G12250	35.233	193	89	2	26	201	83	256	8.57e-33	124
MsG0580027502.01.T01	AT3G12250	46.739	92	49	0	227	318	83	174	9.64e-23	96.7
MsG0580027502.01.T01	AT3G12250	35.233	193	89	2	26	201	104	277	1.25e-32	124
MsG0580027502.01.T01	AT3G12250	46.739	92	49	0	227	318	104	195	1.37e-22	96.7
MsG0580027502.01.T01	AT3G12250	35.233	193	89	2	26	201	110	283	1.61e-32	124
MsG0580027502.01.T01	AT3G12250	46.739	92	49	0	227	318	110	201	2.05e-22	96.3
MsG0580027502.01.T01	AT3G12250	35.233	193	89	2	26	201	110	283	1.61e-32	124
MsG0580027502.01.T01	AT3G12250	46.739	92	49	0	227	318	110	201	2.05e-22	96.3
MsG0580027502.01.T01	AT3G12250	35.233	193	89	2	26	201	110	283	1.61e-32	124
MsG0580027502.01.T01	AT3G12250	46.739	92	49	0	227	318	110	201	2.05e-22	96.3
MsG0580027502.01.T01	AT3G12250	35.233	193	89	2	26	201	110	283	1.61e-32	124
MsG0580027502.01.T01	AT3G12250	46.739	92	49	0	227	318	110	201	2.05e-22	96.3
MsG0580027502.01.T01	AT3G12250	35.233	193	89	2	26	201	135	308	3.15e-32	123
MsG0580027502.01.T01	AT3G12250	46.739	92	49	0	227	318	135	226	2.51e-22	96.3
MsG0580027502.01.T01	AT5G06839	36.493	211	92	3	19	209	186	374	1.72e-31	122
MsG0580027502.01.T01	AT5G06839	46.875	96	51	0	223	318	189	284	8.57e-21	92.8
MsG0580027502.01.T01	AT5G06839	37.129	202	85	3	28	209	194	373	4.22e-31	121
MsG0580027502.01.T01	AT5G06839	46.809	94	50	0	225	318	190	283	2.67e-20	91.3
MsG0580027502.01.T01	AT1G08320	36.170	188	88	3	25	201	116	282	4.84e-31	120
MsG0580027502.01.T01	AT1G08320	38.835	103	62	1	225	327	115	216	1.07e-19	89.0
MsG0580027502.01.T01	AT1G08320	36.170	188	88	3	25	201	116	282	4.84e-31	120
MsG0580027502.01.T01	AT1G08320	38.835	103	62	1	225	327	115	216	1.07e-19	89.0
MsG0580027502.01.T01	AT5G06839	37.129	202	85	3	28	209	237	416	1.22e-30	120
MsG0580027502.01.T01	AT5G06839	46.809	94	50	0	225	318	233	326	4.59e-20	90.9
MsG0580027502.01.T01	AT1G08320	36.170	188	88	3	25	201	240	406	3.85e-30	119
MsG0580027502.01.T01	AT1G08320	38.835	103	62	1	225	327	239	340	4.43e-19	88.2
MsG0580027502.01.T01	AT1G08320	36.170	188	88	3	25	201	240	406	3.85e-30	119
MsG0580027502.01.T01	AT1G08320	38.835	103	62	1	225	327	239	340	4.43e-19	88.2
MsG0580027502.01.T01	AT1G08320	36.170	188	88	3	25	201	240	406	3.85e-30	119
MsG0580027502.01.T01	AT1G08320	38.835	103	62	1	225	327	239	340	4.43e-19	88.2
MsG0580027502.01.T01	AT1G68640	34.197	193	91	2	26	201	232	405	3.00e-29	117
MsG0580027502.01.T01	AT1G68640	38.144	97	60	0	222	318	227	323	1.41e-17	83.6

Find 32 sgRNAs with CRISPR-Local

Find 138 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCTTTATTTGAAACTGAATA+TGG	0.219177	5:-62155036	MsG0580027502.01.T01:CDS
TCTTTGTTTGAAATTGAATA+TGG	0.229069	5:-62157243	MsG0580027502.01.T01:CDS
ATCCTCCAAACCAAAGAAAA+AGG	0.332466	5:+62157022	None:intergenic
ATCCTCCAATCCAAAGAAAA+AGG	0.340935	5:+62154815	None:intergenic
CCTGCTTCATACAATAATAA+AGG	0.353031	5:+62157270	None:intergenic
TTGAAACAGATTAAGATTAG+TGG	0.377149	5:+62156970	None:intergenic
TTCTGAAAAGATTTGAGTAT+TGG	0.389399	5:+62157115	None:intergenic
CCTTTATTATTGTATGAAGC+AGG	0.414145	5:-62157270	MsG0580027502.01.T01:CDS
TTCTGAAAAGATCTGAGTAT+TGG	0.428096	5:+62154908	None:intergenic
TTGAAACTGAATATGGATGT+TGG	0.442901	5:-62155029	MsG0580027502.01.T01:CDS
GATGCTGTATATTTAATCTC+TGG	0.447929	5:-62157069	MsG0580027502.01.T01:CDS
TTCTTGTTATTCTGTTCAGC+AGG	0.461914	5:-62155063	MsG0580027502.01.T01:CDS
CAGCTTGAAGAGAGGATAAA+CGG	0.467500	5:+62156260	None:intergenic
TCAGTTAAAGCATCGAGCTT+AGG	0.490178	5:+62156310	None:intergenic
CTTAGGTACAACGATCTGTA+AGG	0.506819	5:+62156327	None:intergenic
ATTTAGAAGCTGTGATGGAC+GGG	0.512905	5:+62154792	None:intergenic
TTGAAATTGAATATGGACGT+TGG	0.536052	5:-62157236	MsG0580027502.01.T01:CDS
CTTTATTATTGTATGAAGCA+GGG	0.548877	5:-62157269	MsG0580027502.01.T01:CDS
TGGAAACTATGGCTTTCAGA+TGG	0.549894	5:-62156194	MsG0580027502.01.T01:CDS
TCTATTTAATCTCTGGCGCA+TGG	0.556554	5:-62154855	MsG0580027502.01.T01:CDS
GCTGAAGATGCTCTAACAGA+AGG	0.557253	5:-62156241	MsG0580027502.01.T01:CDS
TATATTTAATCTCTGGCGCA+TGG	0.558807	5:-62157062	MsG0580027502.01.T01:CDS
CATTTAGAAGCTGTGATGGA+CGG	0.567145	5:+62154791	None:intergenic
TGTACATTTAGAAGCTGTGA+TGG	0.572912	5:+62154787	None:intergenic
AGCTACTCTCAACAAGGAGA+TGG	0.574805	5:+62154935	None:intergenic
CTGAAGATGCTCTAACAGAA+GGG	0.600192	5:-62156240	MsG0580027502.01.T01:CDS
AGCATCTTCAGCTTGAAGAG+AGG	0.602027	5:+62156252	None:intergenic
GTTGGATTGAAGAACAAGAT+CGG	0.623220	5:-62157218	MsG0580027502.01.T01:CDS
TGTACGTTTAGAAGCTGTGA+CGG	0.653567	5:+62156994	None:intergenic
CTCTGGCGCATGGAAAACAT+CGG	0.663461	5:-62154845	MsG0580027502.01.T01:CDS
GGTTCAAGCTACTCTCAACA+AGG	0.686229	5:+62154929	None:intergenic
CCATAGTTTCCAAAATCTAG+CGG	0.686392	5:+62156205	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	ATATAAATTTCAGTTTTATT+AGG	-	Chr5:62155205-62155224	MsG0580027502.01.T01:intron	10.0%
!!	AAATTCCTTTAGATATTATT+TGG	-	Chr5:62155517-62155536	MsG0580027502.01.T01:intron	15.0%
!!	AATTCCTTTAGATATTATTT+GGG	-	Chr5:62155518-62155537	MsG0580027502.01.T01:intron	15.0%
!!	ATAGTATTACTATTGTAATA+GGG	+	Chr5:62156159-62156178	None:intergenic	15.0%
!!	TATAGTATTACTATTGTAAT+AGG	+	Chr5:62156160-62156179	None:intergenic	15.0%
!!!	ATTGTTAAATTATCATGTTT+TGG	-	Chr5:62155594-62155613	MsG0580027502.01.T01:intron	15.0%
!!	AAAAACGGAAAACATAAAAT+TGG	+	Chr5:62155430-62155449	None:intergenic	20.0%
!!	ATACCAAACGAAATTAAAAA+CGG	+	Chr5:62155445-62155464	None:intergenic	20.0%
!!	ATATCTATTCAACTATATAG+TGG	+	Chr5:62156086-62156105	None:intergenic	20.0%
!!	ATTCAGATAAAATACATGTT+TGG	+	Chr5:62156773-62156792	None:intergenic	20.0%
!!	ATTCCTTTAGATATTATTTG+GGG	-	Chr5:62155519-62155538	MsG0580027502.01.T01:intron	20.0%
!!	GTAATGTAACATCAAAATTT+GGG	-	Chr5:62155947-62155966	MsG0580027502.01.T01:intron	20.0%
!!	TTGATTCAATATGAATTCTA+AGG	+	Chr5:62156291-62156310	None:intergenic	20.0%
!!!	AACTTTGTTATACTAATGTA+TGG	-	Chr5:62155468-62155487	MsG0580027502.01.T01:intron	20.0%
!!!	ACAACAAATATTTTTTCACT+AGG	+	Chr5:62155670-62155689	None:intergenic	20.0%
!!!	TCTTTATTTGAAACTGAATA+TGG	-	Chr5:62157035-62157054	MsG0580027502.01.T01:CDS	20.0%
!!!	TCTTTGTTTGAAATTGAATA+TGG	-	Chr5:62154828-62154847	MsG0580027502.01.T01:CDS	20.0%
!	AACTACCATATTGAATTACA+GGG	-	Chr5:62155152-62155171	MsG0580027502.01.T01:intron	25.0%
!	AGATAAAATACATGTTTGGT+TGG	+	Chr5:62156769-62156788	None:intergenic	25.0%
!	ATAAAATTGGTCATCACAAT+TGG	+	Chr5:62155417-62155436	None:intergenic	25.0%
!	CTGTCTCAACATATAAAATA+AGG	-	Chr5:62156892-62156911	MsG0580027502.01.T01:intron	25.0%
!	CTTTATTATTGTATGAAGCA+GGG	-	Chr5:62154802-62154821	MsG0580027502.01.T01:CDS	25.0%
!	GGTAATGTAACATCAAAATT+TGG	-	Chr5:62155946-62155965	MsG0580027502.01.T01:intron	25.0%
!	TAACTACCATATTGAATTAC+AGG	-	Chr5:62155151-62155170	MsG0580027502.01.T01:intron	25.0%
!	TAGAAATAGAGATGAGAAAT+TGG	-	Chr5:62156857-62156876	MsG0580027502.01.T01:intron	25.0%
!	TTGAAACAGATTAAGATTAG+TGG	+	Chr5:62155104-62155123	None:intergenic	25.0%
!!	ATTTTACATATGAACCAGTA+GGG	-	Chr5:62156700-62156719	MsG0580027502.01.T01:intron	25.0%
!!	GATGTTTTCTATTTAATCTC+TGG	-	Chr5:62157209-62157228	MsG0580027502.01.T01:CDS	25.0%
!!	GTGAATATGTCTCATTTTAA+AGG	-	Chr5:62155176-62155195	MsG0580027502.01.T01:intron	25.0%
!!	TATTTTACATATGAACCAGT+AGG	-	Chr5:62156699-62156718	MsG0580027502.01.T01:intron	25.0%
!!	TTCTGAAAAGATTTGAGTAT+TGG	+	Chr5:62154959-62154978	None:intergenic	25.0%
!!!	AATTTTGATGTTACATTACC+TGG	+	Chr5:62155946-62155965	None:intergenic	25.0%
!!!	ACAAATATTTTTTCACTAGG+CGG	+	Chr5:62155667-62155686	None:intergenic	25.0%
!!!	CAACTTTTTTTTTTTGAAGG+AGG	+	Chr5:62156055-62156074	None:intergenic	25.0%
!!!	GTAATAGGGTTTTGAAAAAA+AGG	+	Chr5:62156145-62156164	None:intergenic	25.0%
!!!	TATGTCTCATTTTAAAGGTT+TGG	-	Chr5:62155181-62155200	MsG0580027502.01.T01:intron	25.0%
!!!	TCGCAACTTTTTTTTTTTGA+AGG	+	Chr5:62156058-62156077	None:intergenic	25.0%
!!!	TTTCCGTTTTTAATTTCGTT+TGG	-	Chr5:62155439-62155458	MsG0580027502.01.T01:intron	25.0%
	AAAGACAAGTAGTTTCTACA+AGG	+	Chr5:62155723-62155742	None:intergenic	30.0%
	AAAGGTTTGTGACTGTAATT+TGG	+	Chr5:62156127-62156146	None:intergenic	30.0%
	AAGAGTGAAACATTTGATGT+AGG	+	Chr5:62156416-62156435	None:intergenic	30.0%
	AAGCAATGACAATTTAGAGA+TGG	-	Chr5:62155345-62155364	MsG0580027502.01.T01:intron	30.0%
	AATTGTCTCTAATGAAGTTG+CGG	-	Chr5:62156939-62156958	MsG0580027502.01.T01:intron	30.0%
	AGGGTTAAGACAAAAAAAAG+AGG	+	Chr5:62156221-62156240	None:intergenic	30.0%
	CAACCCCAAATAATATCTAA+AGG	+	Chr5:62155525-62155544	None:intergenic	30.0%
	CCTGCTTCATACAATAATAA+AGG	+	Chr5:62154804-62154823	None:intergenic	30.0%
	CCTTTATTATTGTATGAAGC+AGG	-	Chr5:62154801-62154820	MsG0580027502.01.T01:CDS	30.0%
	GACAATTTAGAGATGGAAAA+AGG	-	Chr5:62155352-62155371	MsG0580027502.01.T01:intron	30.0%
	GATGCTGTATATTTAATCTC+TGG	-	Chr5:62155002-62155021	MsG0580027502.01.T01:CDS	30.0%
	TGATGTTCTGATTGTCAATT+CGG	+	Chr5:62156837-62156856	None:intergenic	30.0%
	TTGAAACTGAATATGGATGT+TGG	-	Chr5:62157042-62157061	MsG0580027502.01.T01:CDS	30.0%
	TTGAAATTGAATATGGACGT+TGG	-	Chr5:62154835-62154854	MsG0580027502.01.T01:CDS	30.0%
	TTGATGTAGGACTAACTATT+AGG	+	Chr5:62156403-62156422	None:intergenic	30.0%
	TTGGGAATAAGAGTTTGTAT+AGG	+	Chr5:62156185-62156204	None:intergenic	30.0%
!	CTTTAGATATTATTTGGGGT+TGG	-	Chr5:62155523-62155542	MsG0580027502.01.T01:intron	30.0%
!	TAATGTTTTCCTTTCTCTAC+AGG	-	Chr5:62156449-62156468	MsG0580027502.01.T01:intron	30.0%
!	TAGAAGAGATTTTATGACGT+CGG	-	Chr5:62155623-62155642	MsG0580027502.01.T01:intron	30.0%
!	TTCTGAAAAGATCTGAGTAT+TGG	+	Chr5:62157166-62157185	None:intergenic	30.0%
!	TTTTACATATGAACCAGTAG+GGG	-	Chr5:62156701-62156720	MsG0580027502.01.T01:intron	30.0%
!!	AGGAATAGTTTGTTATTACG+TGG	+	Chr5:62156383-62156402	None:intergenic	30.0%
!!	AGTAGAAAGTTTTGTAATCC+AGG	-	Chr5:62155925-62155944	MsG0580027502.01.T01:intron	30.0%
!!	GTTGTTCTTGTATAGTTTTG+CGG	-	Chr5:62155685-62155704	MsG0580027502.01.T01:intron	30.0%
!!!	CCTAAGTTGAGTTTTGATTA+GGG	+	Chr5:62156626-62156645	None:intergenic	30.0%
!!!	TCCTAAGTTGAGTTTTGATT+AGG	+	Chr5:62156627-62156646	None:intergenic	30.0%
!!!	TTTTTTTTGTCTTAACCCTC+CGG	-	Chr5:62156222-62156241	MsG0580027502.01.T01:CDS	30.0%
	ACATAATGTTCACATGACTC+AGG	+	Chr5:62155998-62156017	None:intergenic	35.0%
	ATCCTCCAAACCAAAGAAAA+AGG	+	Chr5:62155052-62155071	None:intergenic	35.0%
	ATCCTCCAATCCAAAGAAAA+AGG	+	Chr5:62157259-62157278	None:intergenic	35.0%
	CATTATGTGTAGTCCCAATA+AGG	-	Chr5:62156010-62156029	MsG0580027502.01.T01:intron	35.0%
	CCATAGTTTCCAAAATCTAG+CGG	+	Chr5:62155869-62155888	None:intergenic	35.0%
	CCCTAATCAAAACTCAACTT+AGG	-	Chr5:62156623-62156642	MsG0580027502.01.T01:intron	35.0%
	CTGATATTCATTCACTACGA+AGG	-	Chr5:62155315-62155334	MsG0580027502.01.T01:intron	35.0%
	GATGTTCTGATTGTCAATTC+GGG	+	Chr5:62156836-62156855	None:intergenic	35.0%
	GATTGCATATCAAGTAACTC+TGG	+	Chr5:62155265-62155284	None:intergenic	35.0%
	GTTGGATTGAAGAACAAGAT+CGG	-	Chr5:62154853-62154872	MsG0580027502.01.T01:CDS	35.0%
	TATATTTAATCTCTGGCGCA+TGG	-	Chr5:62155009-62155028	MsG0580027502.01.T01:CDS	35.0%
	TCACTCCCTGTAATTCAATA+TGG	+	Chr5:62155160-62155179	None:intergenic	35.0%
	TGTACATTTAGAAGCTGTGA+TGG	+	Chr5:62157287-62157306	None:intergenic	35.0%
!	AAGAGGTTACTAGTCTCATT+TGG	+	Chr5:62156204-62156223	None:intergenic	35.0%
!	AGAGGTTACTAGTCTCATTT+GGG	+	Chr5:62156203-62156222	None:intergenic	35.0%
!	GAAAAACTTCCGCTAGATTT+TGG	-	Chr5:62155857-62155876	MsG0580027502.01.T01:intron	35.0%
!	TGCTTTTCAGTGTTATGTTG+TGG	-	Chr5:62154760-62154779	MsG0580027502.01.T01:CDS	35.0%
!	TTGTCAATTCGGGTTTAAAC+TGG	+	Chr5:62156826-62156845	None:intergenic	35.0%
!!	CAAAGAAAAAGGCGTTCAAA+CGG	+	Chr5:62155041-62155060	None:intergenic	35.0%
!!	GGGTTTAAACTGGTTGTTTT+GGG	+	Chr5:62156816-62156835	None:intergenic	35.0%
!!	GTTTGAATCATCGGTTTGAA+CGG	+	Chr5:62156747-62156766	None:intergenic	35.0%
!!	GTTTGGTTGGTTTGAATCAT+CGG	+	Chr5:62156756-62156775	None:intergenic	35.0%
!!	TTCTTGTTATTCTGTTCAGC+AGG	-	Chr5:62157008-62157027	MsG0580027502.01.T01:CDS	35.0%
!!	TTTGAATCATCGGTTTGAAC+GGG	+	Chr5:62156746-62156765	None:intergenic	35.0%
	AAGCATATTTCCCTGAGAAC+CGG	+	Chr5:62156244-62156263	None:intergenic	40.0%
	AGCAACTCGGAAACCTTATT+GGG	+	Chr5:62156026-62156045	None:intergenic	40.0%
	CAGCTTGAAGAGAGGATAAA+CGG	+	Chr5:62155814-62155833	None:intergenic	40.0%
	CTGAAGATGCTCTAACAGAA+GGG	-	Chr5:62155831-62155850	MsG0580027502.01.T01:intron	40.0%
	CTTAGGTACAACGATCTGTA+AGG	+	Chr5:62155747-62155766	None:intergenic	40.0%
	TAGCAACTCGGAAACCTTAT+TGG	+	Chr5:62156027-62156046	None:intergenic	40.0%
	TCTATTTAATCTCTGGCGCA+TGG	-	Chr5:62157216-62157235	MsG0580027502.01.T01:CDS	40.0%
	TGCTTGTGAGCTTGATAGAA+AGG	-	Chr5:62156259-62156278	MsG0580027502.01.T01:CDS	40.0%
	TGGAAACTATGGCTTTCAGA+TGG	-	Chr5:62155877-62155896	MsG0580027502.01.T01:intron	40.0%
	TGTACGTTTAGAAGCTGTGA+CGG	+	Chr5:62155080-62155099	None:intergenic	40.0%
!	AAGGAGGCATAATAGCAACT+CGG	+	Chr5:62156039-62156058	None:intergenic	40.0%
!	CATTTAGAAGCTGTGATGGA+CGG	+	Chr5:62157283-62157302	None:intergenic	40.0%
!	CGGGTTTAAACTGGTTGTTT+TGG	+	Chr5:62156817-62156836	None:intergenic	40.0%
!	CGTTTGAACGCCTTTTTCTT+TGG	-	Chr5:62155039-62155058	MsG0580027502.01.T01:CDS	40.0%
!	GAACGCCTTTTTCTTTGGTT+TGG	-	Chr5:62155044-62155063	MsG0580027502.01.T01:CDS	40.0%
!	GAGCACCTTTTTCTTTGGAT+TGG	-	Chr5:62157251-62157270	MsG0580027502.01.T01:CDS	40.0%
!!	ATTTAGAAGCTGTGATGGAC+GGG	+	Chr5:62157282-62157301	None:intergenic	40.0%
!!	CACCTTTTTCTTTGGATTGG+AGG	-	Chr5:62157254-62157273	MsG0580027502.01.T01:CDS	40.0%
!!	CCGCTAGATTTTGGAAACTA+TGG	-	Chr5:62155866-62155885	MsG0580027502.01.T01:intron	40.0%
!!	TCAGTTAAAGCATCGAGCTT+AGG	+	Chr5:62155764-62155783	None:intergenic	40.0%
	AGCATCTTCAGCTTGAAGAG+AGG	+	Chr5:62155822-62155841	None:intergenic	45.0%
	AGCTACTCTCAACAAGGAGA+TGG	+	Chr5:62157139-62157158	None:intergenic	45.0%
	ATATTTCCCTGAGAACCGGA+GGG	+	Chr5:62156240-62156259	None:intergenic	45.0%
	CAAGTAACTCTGGCTGTGTT+TGG	+	Chr5:62155255-62155274	None:intergenic	45.0%
	CAATTGGCATCTCTCACACT+TGG	+	Chr5:62155401-62155420	None:intergenic	45.0%
	GCTGAAGATGCTCTAACAGA+AGG	-	Chr5:62155830-62155849	MsG0580027502.01.T01:intron	45.0%
	GGTTCAAGCTACTCTCAACA+AGG	+	Chr5:62154938-62154957	None:intergenic	45.0%
	TCACCTTAGGCAACAAACTC+TGG	-	Chr5:62156476-62156495	MsG0580027502.01.T01:intron	45.0%
	TGCGCACTCTTAGTTCATTG+TGG	-	Chr5:62156574-62156593	MsG0580027502.01.T01:intron	45.0%
!	ATGAACTAAGAGTGCGCAGA+CGG	+	Chr5:62156572-62156591	None:intergenic	45.0%
!!	CGGTAGAGCACCTTTTTCTT+TGG	-	Chr5:62157246-62157265	MsG0580027502.01.T01:CDS	45.0%
!!!	CGCCTTTTTCTTTGGTTTGG+AGG	-	Chr5:62155047-62155066	MsG0580027502.01.T01:CDS	45.0%
!!	AAAAAATAAAATTATTTAAG+AGG	+	Chr5:62156658-62156677	None:intergenic	5.0%
!!	AAAAATAAAATTATTTAAGA+GGG	+	Chr5:62156657-62156676	None:intergenic	5.0%
	ACAATTGCGCAAGCTGCTCA+AGG	-	Chr5:62156519-62156538	MsG0580027502.01.T01:intron	50.0%
	CATATTTCCCTGAGAACCGG+AGG	+	Chr5:62156241-62156260	None:intergenic	50.0%
	CTCTACAGGCAGATCACCTT+AGG	-	Chr5:62156463-62156482	MsG0580027502.01.T01:intron	50.0%
	CTCTGGCGCATGGAAAACAT+CGG	-	Chr5:62157226-62157245	MsG0580027502.01.T01:CDS	50.0%
	GGTGATCTGCCTGTAGAGAA+AGG	+	Chr5:62156461-62156480	None:intergenic	50.0%
	TCTTAACCCTCCGGTTCTCA+GGG	-	Chr5:62156231-62156250	MsG0580027502.01.T01:CDS	50.0%
!!	ACGCCAGAGTTTGTTGCCTA+AGG	+	Chr5:62156482-62156501	None:intergenic	50.0%
	GTACCTGTGAACACCCCTAC+TGG	+	Chr5:62156717-62156736	None:intergenic	55.0%
	GTCTTAACCCTCCGGTTCTC+AGG	-	Chr5:62156230-62156249	MsG0580027502.01.T01:CDS	55.0%
!!	CTCAAGGCTTGCTGGCTATG+GGG	-	Chr5:62156535-62156554	MsG0580027502.01.T01:intron	55.0%
!!	GAACCAGTAGGGGTGTTCAC+AGG	-	Chr5:62156711-62156730	MsG0580027502.01.T01:intron	55.0%
!!	GCTCAAGGCTTGCTGGCTAT+GGG	-	Chr5:62156534-62156553	MsG0580027502.01.T01:intron	55.0%
!!	TCAAGGCTTGCTGGCTATGG+GGG	-	Chr5:62156536-62156555	MsG0580027502.01.T01:intron	55.0%
!!	TGCTCAAGGCTTGCTGGCTA+TGG	-	Chr5:62156533-62156552	MsG0580027502.01.T01:intron	55.0%
	GCAAGCTGCTCAAGGCTTGC+TGG	-	Chr5:62156527-62156546	MsG0580027502.01.T01:intron	60.0%

Chromosome	Type	Strat	End	Strand	Name
Chr5	gene	62154747	62157346	62154747	ID=MsG0580027502.01;Name=MsG0580027502.01
Chr5	mRNA	62154747	62157346	62154747	ID=MsG0580027502.01.T01;Parent=MsG0580027502.01;Name=MsG0580027502.01.T01;_AED=0.45;_eAED=0.50;_QI=0\|0\|0\|1\|0\|0\|3\|0\|331
Chr5	exon	62156966	62157346	62156966	ID=MsG0580027502.01.T01:exon:13721;Parent=MsG0580027502.01.T01
Chr5	exon	62156142	62156365	62156142	ID=MsG0580027502.01.T01:exon:13720;Parent=MsG0580027502.01.T01
Chr5	exon	62154747	62155137	62154747	ID=MsG0580027502.01.T01:exon:13719;Parent=MsG0580027502.01.T01
Chr5	CDS	62156966	62157346	62156966	ID=MsG0580027502.01.T01:cds;Parent=MsG0580027502.01.T01
Chr5	CDS	62156142	62156365	62156142	ID=MsG0580027502.01.T01:cds;Parent=MsG0580027502.01.T01
Chr5	CDS	62154747	62155137	62154747	ID=MsG0580027502.01.T01:cds;Parent=MsG0580027502.01.T01

Gene Sequence

>MsG0580027502.01.T01

ATGATAGATCATTTGCTTTTCAGTGTTATGTTGTGGCTTTCTTATAAAAATATGCCTTTATTATTGTATGAAGCAGGGATATCTTTGTTTGAAATTGAATATGGACGTTGGATTGAAGAACAAGATCGGCAAAACGAAGAACTAAGAAATGCATTGCAAACTAATGCATCTGATATACAACTTCATCTACTTGTTGAGAGTAGCTTGAACCAATACTCAAATCTTTTCAGAATGAAAGCAGAAGCTGCAAAGATTGATGCTGTATATTTAATCTCTGGCGCATGGAAAACGCCGTTTGAACGCCTTTTTCTTTGGTTTGGAGGATCATGTCCGTCACAGCTTCTAAACGTACATCCACTAATCTTAATCTGTTTCAATTTCAAACTACTTGTCTTTTCCTTACAGATCGTTGTACCTAAGCTCGATGCTTTAACTGATCAACAAATTGTTAGCATTAACAATCTCCGTTTATCCTCTCTTCAAGCTGAAGATGCTCTAACAGAAGGGTTAGAAAAACTTCCGCTAGATTTTGGAAACTATGGCTTTCAGATGGCTGCTGTCATGAACAAAGTAGAAGCAGTAGAAAGTTTTGTAATCCAGGTAATTTGCGGAGATTTAATGCGTCATTGTTTTAGTAGATCATGTGTTTTTAAAATATTCTTGTTATTCTGTTCAGCAGGTATATCTTTATTTGAAACTGAATATGGATGTTGGATTCAAGAGCAAGATAGACAAAATGAAGAGCTAAGAAATGCTTTGCACAATAACGCATCTGATATACAGCTCCATCTCCTTGTTGAGAGTAGCTTGAACCAATACTCAGATCTTTTCAGAATGAAAGCTGAAGCTGCAAAGACTGATGTTTTCTATTTAATCTCTGGCGCATGGAAAACATCGGTAGAGCACCTTTTTCTTTGGATTGGAGGATCCCGTCCATCACAGCTTCTAAATGTACATCTATCTACTTATCTTAATCTGCTTGAATTTTGTTGTTAA

Protein sequence

>MsG0580027502.01.T01

MIDHLLFSVMLWLSYKNMPLLLYEAGISLFEIEYGRWIEEQDRQNEELRNALQTNASDIQLHLLVESSLNQYSNLFRMKAEAAKIDAVYLISGAWKTPFERLFLWFGGSCPSQLLNVHPLILICFNFKLLVFSLQIVVPKLDALTDQQIVSINNLRLSSLQAEDALTEGLEKLPLDFGNYGFQMAAVMNKVEAVESFVIQVICGDLMRHCFSRSCVFKIFLLFCSAGISLFETEYGCWIQEQDRQNEELRNALHNNASDIQLHLLVESSLNQYSDLFRMKAEAAKTDVFYLISGAWKTSVEHLFLWIGGSRPSQLLNVHLSTYLNLLEFCC*