AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580027997.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580027997.01.T02 MTR_5g055100 87.444 223 27 1 1 222 15 237 5.57e-146 406
MsG0580027997.01.T02 MTR_2g085280 81.982 222 39 1 1 221 15 236 5.15e-134 376
MsG0580027997.01.T02 MTR_2g085250 81.982 222 39 1 1 221 15 236 1.48e-133 375
MsG0580027997.01.T02 MTR_5g045560 76.303 211 50 0 1 211 15 225 2.84e-117 334
MsG0580027997.01.T02 MTR_5g053390 75.355 211 52 0 1 211 15 225 2.56e-115 329
MsG0580027997.01.T02 MTR_1g075600 69.194 211 65 0 1 211 15 225 1.84e-104 301
MsG0580027997.01.T02 MTR_8g043650 64.574 223 78 1 1 222 15 237 2.07e-104 301
MsG0580027997.01.T02 MTR_1g077360 69.194 211 65 0 1 211 15 225 4.51e-104 300
MsG0580027997.01.T02 MTR_1g105920 67.150 207 68 0 1 207 15 221 4.52e-100 290
MsG0580027997.01.T02 MTR_1g105910 63.033 211 78 0 1 211 15 225 1.30e-98 286
MsG0580027997.01.T02 MTR_1g105905 62.273 220 82 1 4 222 1 220 4.34e-98 285
MsG0580027997.01.T02 MTR_1g012570 65.217 207 72 0 1 207 15 221 4.28e-96 280
MsG0580027997.01.T02 MTR_2g030740 64.251 207 74 0 1 207 15 221 4.62e-96 280
MsG0580027997.01.T02 MTR_0121s0080 59.009 222 91 0 1 222 15 236 3.59e-94 275
MsG0580027997.01.T02 MTR_3g052920 63.415 205 75 0 1 205 15 219 1.61e-92 271
MsG0580027997.01.T02 MTR_3g030770 60.181 221 70 3 1 211 15 227 1.92e-88 260
MsG0580027997.01.T02 MTR_1g108510 59.729 221 71 3 1 211 15 227 3.85e-86 254
MsG0580027997.01.T02 MTR_2g093190 59.276 221 72 3 1 211 15 227 5.43e-84 249
MsG0580027997.01.T02 MTR_7g062350 54.505 222 100 1 2 222 27 248 1.71e-83 248
MsG0580027997.01.T02 MTR_1g108580 54.464 224 86 3 1 222 15 224 1.61e-79 238
MsG0580027997.01.T02 MTR_3g052870 59.024 205 65 2 1 205 15 200 2.32e-78 234
MsG0580027997.01.T02 MTR_1g106070 62.500 168 63 0 1 168 15 182 3.50e-73 220
MsG0580027997.01.T02 MTR_1g075570 60.674 178 56 1 4 181 1 164 1.67e-62 192
MsG0580027997.01.T02 MTR_3g080940 48.837 172 87 1 1 172 15 185 1.12e-50 164
MsG0580027997.01.T02 MTR_3g067910 73.529 102 27 0 7 108 2 103 7.97e-49 155
MsG0580027997.01.T02 MTR_0121s0100 61.404 114 44 0 1 114 15 128 2.29e-42 140
MsG0580027997.01.T02 MTR_3g030780 60.550 109 43 0 1 109 15 123 3.30e-41 137
MsG0580027997.01.T02 MTR_3g067875 87.500 56 7 0 4 59 1 56 8.89e-30 105
MsG0580027997.01.T02 MTR_7g028448 37.226 137 74 2 8 144 25 149 6.05e-28 104
MsG0580027997.01.T02 MTR_4g036915 37.226 137 74 2 8 144 25 149 6.05e-28 104
MsG0580027997.01.T02 MTR_3g067915 54.945 91 41 0 19 109 3 93 1.31e-26 98.6
MsG0580027997.01.T02 MTR_3g067870 73.016 63 17 0 2 64 83 145 4.52e-25 96.7
MsG0580027997.01.T02 MTR_8g086290 34.615 156 92 2 1 153 18 166 3.23e-24 95.1
MsG0580027997.01.T02 MTR_2g105290 29.878 164 103 2 1 160 18 173 2.01e-22 90.1
MsG0580027997.01.T02 MTR_1g108500 80.000 50 10 0 8 57 110 159 3.41e-22 92.8
MsG0580027997.01.T02 MTR_1g047550 55.738 61 27 0 11 71 18 78 1.77e-19 82.8
MsG0580027997.01.T02 MTR_4g131030 37.415 147 80 5 11 147 18 162 3.44e-19 82.8
MsG0580027997.01.T02 MTR_8g079502 60.000 55 22 0 11 65 18 72 5.33e-19 81.3
MsG0580027997.01.T02 MTR_8g051580 55.556 63 28 0 11 73 18 80 7.37e-19 80.9
MsG0580027997.01.T02 MTR_8g046350 34.247 146 84 4 11 151 18 156 1.14e-18 80.1
MsG0580027997.01.T02 MTR_4g127140 29.762 168 96 4 8 161 25 184 3.47e-18 79.3
MsG0580027997.01.T02 MTR_1g054265 45.205 73 40 0 1 73 8 80 9.95e-18 77.8
MsG0580027997.01.T02 MTR_1g063160 37.374 99 60 1 1 97 8 106 6.34e-17 75.9
MsG0580027997.01.T02 MTR_4g102530 50.746 67 33 0 1 67 8 74 8.32e-17 76.3
MsG0580027997.01.T02 MTR_4g093970 43.158 95 45 2 1 87 34 127 5.17e-16 74.7
MsG0580027997.01.T02 MTR_7g075870 48.684 76 35 1 1 72 8 83 2.06e-15 72.4
MsG0580027997.01.T02 MTR_3g005530 48.387 62 32 0 1 62 8 69 3.77e-15 72.0
MsG0580027997.01.T02 MTR_8g033220 47.143 70 37 0 1 70 8 77 5.04e-15 71.6
MsG0580027997.01.T02 MTR_8g033220 47.143 70 37 0 1 70 8 77 5.52e-15 71.6
MsG0580027997.01.T02 MTR_4g109830 53.968 63 28 1 1 62 8 70 5.57e-15 71.6
MsG0580027997.01.T02 MTR_6g464720 53.968 63 28 1 1 62 8 70 7.43e-15 71.6
MsG0580027997.01.T02 MTR_8g033270 50.685 73 34 1 1 71 8 80 1.09e-14 71.2
MsG0580027997.01.T02 MTR_1g101970 53.226 62 29 0 1 62 8 69 1.17e-14 70.1
MsG0580027997.01.T02 MTR_5g066180 50.000 62 31 0 1 62 8 69 1.80e-14 70.1
MsG0580027997.01.T02 MTR_7g075870 48.052 77 35 2 1 72 8 84 3.98e-14 68.9
MsG0580027997.01.T02 MTR_4g094632 50.000 60 30 0 4 63 11 70 7.19e-14 67.0
MsG0580027997.01.T02 MTR_1g053070 51.613 62 30 0 1 62 8 69 8.93e-14 68.6
MsG0580027997.01.T02 MTR_4g094638 47.619 63 33 0 1 63 8 70 8.94e-14 67.4
MsG0580027997.01.T02 MTR_5g032150 50.000 62 31 0 1 62 8 69 1.21e-13 67.8
MsG0580027997.01.T02 MTR_3g452380 42.647 68 39 0 1 68 23 90 1.39e-13 68.2
MsG0580027997.01.T02 MTR_5g032520 50.000 62 31 0 1 62 8 69 1.53e-13 67.8
MsG0580027997.01.T02 MTR_2g009890 41.429 70 41 0 1 70 8 77 1.90e-13 68.2
MsG0580027997.01.T02 MTR_5g031000 43.548 62 35 0 1 62 8 69 2.40e-13 67.4
MsG0580027997.01.T02 MTR_8g087860 46.774 62 33 0 1 62 24 85 2.40e-13 67.4
MsG0580027997.01.T02 MTR_5g031000 43.548 62 35 0 1 62 8 69 2.42e-13 67.0
MsG0580027997.01.T02 MTR_3g437790 30.769 143 80 5 12 144 30 163 3.31e-13 65.9
MsG0580027997.01.T02 MTR_0003s0590 50.000 62 31 0 1 62 8 69 4.03e-13 67.0
MsG0580027997.01.T02 MTR_8g066260 49.206 63 31 1 1 62 8 70 4.57e-13 66.6
MsG0580027997.01.T02 MTR_7g016630 46.970 66 34 1 1 65 8 73 4.91e-13 66.6
MsG0580027997.01.T02 MTR_4g084740 46.575 73 37 2 1 72 8 79 5.82e-13 67.4
MsG0580027997.01.T02 MTR_2g017865 46.774 62 33 0 1 62 23 84 5.94e-13 66.6
MsG0580027997.01.T02 MTR_2g461710 56.000 50 22 0 1 50 8 57 9.38e-13 61.6
MsG0580027997.01.T02 MTR_3g102570 49.231 65 32 1 1 64 8 72 1.03e-12 66.2
MsG0580027997.01.T02 MTR_6g015975 50.794 63 30 1 1 62 8 70 1.04e-12 65.9
MsG0580027997.01.T02 MTR_7g016600 50.794 63 30 1 1 62 8 70 1.23e-12 65.5
MsG0580027997.01.T02 MTR_7g075850 46.053 76 38 2 1 73 8 83 2.88e-12 64.3
MsG0580027997.01.T02 MTR_8g022970 30.556 144 75 4 13 144 36 166 4.05e-12 63.2
MsG0580027997.01.T02 MTR_5g046790 47.619 63 32 1 1 62 8 70 4.40e-12 63.5
MsG0580027997.01.T02 MTR_3g113030 47.368 57 30 0 1 57 8 64 1.04e-11 62.8
MsG0580027997.01.T02 MTR_5g021270 48.438 64 31 1 1 62 8 71 1.09e-11 62.8
MsG0580027997.01.T02 MTR_5g021270 48.438 64 31 1 1 62 8 71 1.10e-11 62.8
MsG0580027997.01.T02 MTR_1g038300 43.590 78 38 2 1 72 8 85 1.17e-11 62.4
MsG0580027997.01.T02 MTR_4g051538 40.299 67 40 0 9 75 23 89 1.37e-11 62.4
MsG0580027997.01.T02 MTR_3g088615 29.496 139 72 5 1 118 8 141 1.53e-11 61.2
MsG0580027997.01.T02 MTR_5g046870 47.619 63 32 1 1 62 8 70 2.00e-11 59.3
MsG0580027997.01.T02 MTR_1g029670 45.000 60 32 1 1 60 8 66 2.87e-11 60.5
MsG0580027997.01.T02 MTR_5g066960 47.059 51 27 0 1 51 8 58 3.57e-11 57.4
MsG0580027997.01.T02 MTR_4g093030 31.897 116 59 2 1 100 8 119 5.22e-11 59.3
MsG0580027997.01.T02 MTR_8g097090 47.619 63 32 1 1 62 8 70 6.36e-11 60.5
MsG0580027997.01.T02 MTR_3g109930 30.818 159 96 5 13 164 20 171 8.70e-11 59.3
MsG0580027997.01.T01 MTR_5g055100 87.764 237 28 1 1 236 1 237 3.84e-156 432
MsG0580027997.01.T01 MTR_2g085280 81.356 236 43 1 1 235 1 236 6.45e-142 397
MsG0580027997.01.T01 MTR_2g085250 81.356 236 43 1 1 235 1 236 2.35e-141 395
MsG0580027997.01.T01 MTR_5g045560 76.889 225 52 0 1 225 1 225 1.98e-126 357
MsG0580027997.01.T01 MTR_5g053390 76.000 225 54 0 1 225 1 225 1.49e-124 353
MsG0580027997.01.T01 MTR_1g077360 70.222 225 67 0 1 225 1 225 1.85e-113 325
MsG0580027997.01.T01 MTR_1g075600 70.222 225 67 0 1 225 1 225 2.55e-113 324
MsG0580027997.01.T01 MTR_8g043650 64.557 237 83 1 1 236 1 237 1.63e-111 320
MsG0580027997.01.T01 MTR_1g105920 67.421 221 72 0 1 221 1 221 1.58e-108 312
MsG0580027997.01.T01 MTR_1g105910 63.556 225 82 0 1 225 1 225 9.05e-107 308
MsG0580027997.01.T01 MTR_2g030740 65.158 221 77 0 1 221 1 221 3.24e-105 304
MsG0580027997.01.T01 MTR_1g012570 65.611 221 76 0 1 221 1 221 1.71e-104 302
MsG0580027997.01.T01 MTR_3g052920 63.927 219 79 0 1 219 1 219 3.85e-101 293
MsG0580027997.01.T01 MTR_0121s0080 58.898 236 97 0 1 236 1 236 8.81e-100 290
MsG0580027997.01.T01 MTR_1g105905 62.273 220 82 1 18 236 1 220 3.02e-98 285
MsG0580027997.01.T01 MTR_3g030770 61.277 235 73 3 1 225 1 227 1.39e-96 281
MsG0580027997.01.T01 MTR_1g108510 60.851 235 74 3 1 225 1 227 1.90e-94 276
MsG0580027997.01.T01 MTR_2g093190 60.000 235 76 3 1 225 1 227 1.60e-91 269
MsG0580027997.01.T01 MTR_3g052870 59.817 219 69 2 1 219 1 200 8.30e-87 256
MsG0580027997.01.T01 MTR_1g108580 55.042 238 91 3 1 236 1 224 2.72e-86 256
MsG0580027997.01.T01 MTR_7g062350 52.766 235 110 1 3 236 14 248 6.55e-84 250
MsG0580027997.01.T01 MTR_1g106070 63.187 182 67 0 1 182 1 182 1.46e-81 242
MsG0580027997.01.T01 MTR_1g075570 60.674 178 56 1 18 195 1 164 1.84e-62 192
MsG0580027997.01.T01 MTR_3g080940 48.387 186 95 1 1 186 1 185 1.21e-53 172
MsG0580027997.01.T01 MTR_0121s0100 63.281 128 47 0 1 128 1 128 1.76e-50 161
MsG0580027997.01.T01 MTR_3g030780 61.789 123 47 0 1 123 1 123 2.07e-49 158
MsG0580027997.01.T01 MTR_3g067910 73.529 102 27 0 21 122 2 103 7.99e-49 156
MsG0580027997.01.T01 MTR_3g067875 87.500 56 7 0 18 73 1 56 1.12e-29 106
MsG0580027997.01.T01 MTR_8g086290 36.747 166 95 2 5 167 8 166 2.83e-29 108
MsG0580027997.01.T01 MTR_7g028448 38.961 154 82 2 5 158 8 149 5.51e-28 105
MsG0580027997.01.T01 MTR_4g036915 38.961 154 82 2 5 158 8 149 5.51e-28 105
MsG0580027997.01.T01 MTR_2g105290 32.184 174 106 2 5 174 8 173 3.28e-27 103
MsG0580027997.01.T01 MTR_3g067915 54.945 91 41 0 33 123 3 93 1.67e-26 99.0
MsG0580027997.01.T01 MTR_3g067870 73.016 63 17 0 16 78 83 145 6.12e-25 96.7
MsG0580027997.01.T01 MTR_1g047550 50.649 77 38 0 9 85 2 78 7.20e-23 92.0
MsG0580027997.01.T01 MTR_8g079502 53.521 71 33 0 9 79 2 72 1.27e-22 91.3
MsG0580027997.01.T01 MTR_4g131030 36.810 163 91 5 9 161 2 162 1.53e-22 92.0
MsG0580027997.01.T01 MTR_1g108500 57.317 82 14 1 22 103 110 170 3.46e-22 93.2
MsG0580027997.01.T01 MTR_8g046350 33.951 162 95 4 9 165 2 156 2.18e-21 87.4
MsG0580027997.01.T01 MTR_8g051580 49.367 79 40 0 9 87 2 80 4.16e-21 87.4
MsG0580027997.01.T01 MTR_1g054265 46.835 79 42 0 9 87 2 80 6.91e-21 86.3
MsG0580027997.01.T01 MTR_1g063160 39.048 105 62 1 9 111 2 106 3.11e-20 85.1
MsG0580027997.01.T01 MTR_4g127140 32.432 185 103 4 5 175 8 184 2.65e-19 82.8
MsG0580027997.01.T01 MTR_4g093970 45.000 100 46 2 10 101 29 127 1.06e-18 82.4
MsG0580027997.01.T01 MTR_3g005530 51.471 68 33 0 9 76 2 69 2.62e-18 80.9
MsG0580027997.01.T01 MTR_4g094638 52.174 69 33 0 9 77 2 70 5.22e-18 79.0
MsG0580027997.01.T01 MTR_4g094632 52.174 69 33 0 9 77 2 70 6.99e-18 78.2
MsG0580027997.01.T01 MTR_3g452380 45.000 80 44 0 3 82 11 90 1.12e-17 79.7
MsG0580027997.01.T01 MTR_4g102530 50.000 72 36 0 10 81 3 74 1.57e-17 78.6
MsG0580027997.01.T01 MTR_8g033270 50.633 79 37 1 9 85 2 80 3.03e-17 78.6
MsG0580027997.01.T01 MTR_4g109830 52.174 69 32 1 9 76 2 70 4.98e-17 77.8
MsG0580027997.01.T01 MTR_1g053070 54.412 68 31 0 9 76 2 69 8.13e-17 77.4
MsG0580027997.01.T01 MTR_5g066180 50.000 68 34 0 9 76 2 69 1.34e-16 76.3
MsG0580027997.01.T01 MTR_8g087860 50.000 68 34 0 9 76 18 85 1.60e-16 76.6
MsG0580027997.01.T01 MTR_7g075870 48.148 81 38 1 10 86 3 83 2.21e-16 75.5
MsG0580027997.01.T01 MTR_1g101970 52.941 68 32 0 9 76 2 69 2.33e-16 74.7
MsG0580027997.01.T01 MTR_6g464720 52.174 69 32 1 9 76 2 70 2.67e-16 75.9
MsG0580027997.01.T01 MTR_2g017865 50.000 68 34 0 9 76 17 84 3.71e-16 75.9
MsG0580027997.01.T01 MTR_0003s0590 52.941 68 32 0 9 76 2 69 4.35e-16 75.5
MsG0580027997.01.T01 MTR_8g033220 46.667 75 40 0 10 84 3 77 6.28e-16 74.7
MsG0580027997.01.T01 MTR_8g033220 46.667 75 40 0 10 84 3 77 6.72e-16 74.3
MsG0580027997.01.T01 MTR_5g032150 50.000 68 34 0 9 76 2 69 7.31e-16 74.3
MsG0580027997.01.T01 MTR_5g032520 50.000 68 34 0 9 76 2 69 9.28e-16 73.9
MsG0580027997.01.T01 MTR_4g084740 48.101 79 39 2 9 86 2 79 1.15e-15 75.1
MsG0580027997.01.T01 MTR_2g009890 43.421 76 43 0 9 84 2 77 1.44e-15 74.3
MsG0580027997.01.T01 MTR_5g031000 45.588 68 37 0 9 76 2 69 2.28e-15 73.2
MsG0580027997.01.T01 MTR_6g015975 50.725 69 33 1 9 76 2 70 2.31e-15 73.6
MsG0580027997.01.T01 MTR_5g031000 45.588 68 37 0 9 76 2 69 2.38e-15 72.8
MsG0580027997.01.T01 MTR_7g016600 50.725 69 33 1 9 76 2 70 3.28e-15 72.8
MsG0580027997.01.T01 MTR_8g066260 47.826 69 35 1 9 76 2 70 3.84e-15 72.8
MsG0580027997.01.T01 MTR_7g016630 45.833 72 38 1 9 79 2 73 4.01e-15 72.8
MsG0580027997.01.T01 MTR_7g075870 47.561 82 38 2 10 86 3 84 4.80e-15 72.0
MsG0580027997.01.T01 MTR_3g102570 49.296 71 35 1 9 78 2 72 6.05e-15 73.2
MsG0580027997.01.T01 MTR_7g075850 46.341 82 41 2 9 87 2 83 8.04e-15 72.0
MsG0580027997.01.T01 MTR_2g461710 53.571 56 26 0 9 64 2 57 8.73e-15 67.4
MsG0580027997.01.T01 MTR_5g021270 51.429 70 32 1 9 76 2 71 8.87e-15 71.6
MsG0580027997.01.T01 MTR_5g021270 51.429 70 32 1 9 76 2 71 9.19e-15 71.2
MsG0580027997.01.T01 MTR_5g046790 47.826 69 35 1 9 76 2 70 1.05e-14 70.9
MsG0580027997.01.T01 MTR_3g088615 31.724 145 73 5 9 132 2 141 1.19e-14 70.1
MsG0580027997.01.T01 MTR_1g038300 46.429 84 39 2 9 86 2 85 1.35e-14 70.9
MsG0580027997.01.T01 MTR_5g046870 49.275 69 34 1 9 76 2 70 2.02e-14 67.8
MsG0580027997.01.T01 MTR_1g029670 48.485 66 33 1 9 74 2 66 2.93e-14 68.9
MsG0580027997.01.T01 MTR_5g066960 49.123 57 29 0 9 65 2 58 4.24e-14 65.5
MsG0580027997.01.T01 MTR_3g113030 45.714 70 36 1 9 76 2 71 1.38e-13 68.2
MsG0580027997.01.T01 MTR_8g097090 47.826 69 35 1 9 76 2 70 1.69e-13 68.2
MsG0580027997.01.T01 MTR_4g109810 52.632 57 27 0 9 65 2 58 1.89e-13 67.8
MsG0580027997.01.T01 MTR_3g084980 53.571 56 26 0 9 64 2 57 2.53e-13 67.8
MsG0580027997.01.T01 MTR_4g093030 33.607 122 61 2 9 114 2 119 3.54e-13 65.5
MsG0580027997.01.T01 MTR_3g437790 30.769 143 80 5 26 158 30 163 4.34e-13 65.9
MsG0580027997.01.T01 MTR_8g022970 29.825 171 93 5 2 158 9 166 5.43e-13 65.9
MsG0580027997.01.T01 MTR_4g051538 38.202 89 55 0 1 89 1 89 7.50e-12 63.5
MsG0580027997.01.T01 MTR_4g036050 41.429 70 40 1 9 77 2 71 1.56e-11 61.6
MsG0580027997.01.T01 MTR_4g036050 41.429 70 40 1 9 77 2 71 1.59e-11 61.6
MsG0580027997.01.T01 MTR_4g036050 41.429 70 40 1 9 77 2 71 1.62e-11 61.6
MsG0580027997.01.T01 MTR_4g036050 41.429 70 40 1 9 77 2 71 1.69e-11 62.0
MsG0580027997.01.T01 MTR_3g109930 30.818 159 96 5 27 178 20 171 8.90e-11 59.3
MsG0580027997.01.T01 MTR_4g108720 41.558 77 43 1 9 83 2 78 9.84e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580027997.01.T02 AT5G60440 47.486 179 87 3 1 176 13 187 1.42e-46 156
MsG0580027997.01.T02 AT1G65360 40.465 215 113 6 3 211 15 220 9.17e-37 129
MsG0580027997.01.T02 AT2G24840 48.026 152 74 2 1 149 69 218 1.19e-36 129
MsG0580027997.01.T02 AT1G01530 40.113 177 98 3 3 178 15 184 2.13e-33 120
MsG0580027997.01.T02 AT4G36590 35.714 224 125 7 1 212 13 229 1.53e-29 110
MsG0580027997.01.T02 AT3G04100 29.054 148 101 2 1 144 20 167 5.62e-20 84.7
MsG0580027997.01.T02 AT1G72350 33.750 160 68 5 1 155 49 175 1.40e-18 81.3
MsG0580027997.01.T02 AT2G34440 40.000 95 56 1 11 105 18 111 4.98e-18 78.6
MsG0580027997.01.T02 AT2G45660 55.556 63 28 0 1 63 8 70 7.89e-18 77.8
MsG0580027997.01.T02 AT3G66656 54.839 62 28 0 1 62 8 69 1.98e-17 77.0
MsG0580027997.01.T02 AT2G45660 55.556 63 28 0 1 63 8 70 2.68e-17 77.8
MsG0580027997.01.T02 AT4G37940 31.737 167 83 5 1 140 8 170 2.89e-17 77.4
MsG0580027997.01.T02 AT4G22950 47.761 67 35 0 1 67 8 74 1.20e-16 75.1
MsG0580027997.01.T02 AT4G37940 31.073 177 85 6 1 140 8 184 3.30e-16 75.1
MsG0580027997.01.T02 AT2G45650 56.452 62 27 0 1 62 8 69 3.93e-16 75.1
MsG0580027997.01.T02 AT2G22630 31.073 177 85 6 1 140 8 184 4.02e-16 74.7
MsG0580027997.01.T02 AT2G22630 31.073 177 85 6 1 140 8 184 4.02e-16 74.7
MsG0580027997.01.T02 AT4G22950 48.485 66 34 0 1 66 8 73 4.47e-16 74.3
MsG0580027997.01.T02 AT4G22950 48.485 66 34 0 1 66 8 73 4.47e-16 74.3
MsG0580027997.01.T02 AT5G51870 53.226 62 29 0 1 62 8 69 1.57e-15 72.0
MsG0580027997.01.T02 AT5G51870 53.226 62 29 0 1 62 8 69 1.84e-15 72.4
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MsG0580027997.01.T02 AT5G62165 50.000 62 31 0 1 62 8 69 1.23e-14 69.3
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MsG0580027997.01.T02 AT4G09960 46.774 62 33 0 1 62 9 70 1.35e-14 70.9
MsG0580027997.01.T02 AT4G09960 46.774 62 33 0 1 62 18 79 1.62e-14 70.5
MsG0580027997.01.T02 AT3G30260 30.714 140 67 4 1 110 8 147 1.68e-14 70.9
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MsG0580027997.01.T02 AT5G62165 50.000 62 31 0 1 62 8 69 2.37e-14 69.3
MsG0580027997.01.T02 AT5G62165 50.000 62 31 0 1 62 8 69 2.39e-14 69.7
MsG0580027997.01.T02 AT5G62165 50.000 62 31 0 1 62 8 69 2.39e-14 69.7
MsG0580027997.01.T02 AT5G62165 50.000 62 31 0 1 62 8 69 2.39e-14 69.7
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MsG0580027997.01.T02 AT2G22540 50.000 62 31 0 1 62 8 69 2.91e-14 70.1
MsG0580027997.01.T02 AT2G22540 50.000 62 31 0 1 62 8 69 2.91e-14 70.1
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MsG0580027997.01.T02 AT3G57230 45.161 62 34 0 1 62 8 69 3.25e-14 69.7
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MsG0580027997.01.T02 AT3G57390 53.226 62 29 0 1 62 8 69 4.39e-14 69.7
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MsG0580027997.01.T02 AT5G51860 50.000 62 31 0 1 62 8 69 5.25e-14 68.6
MsG0580027997.01.T02 AT5G51860 50.000 62 31 0 1 62 8 69 7.66e-14 68.2
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MsG0580027997.01.T02 AT4G11880 47.761 67 34 1 1 66 8 74 9.74e-14 67.4
MsG0580027997.01.T02 AT4G11880 47.761 67 34 1 1 66 8 74 9.74e-14 67.4
MsG0580027997.01.T02 AT5G23260 34.532 139 63 4 1 111 24 162 1.17e-13 68.6
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MsG0580027997.01.T02 AT4G11880 47.761 67 34 1 1 66 8 74 1.31e-13 67.8
MsG0580027997.01.T02 AT5G60910 50.794 63 30 1 1 62 8 70 2.05e-13 67.8
MsG0580027997.01.T02 AT5G10140 47.619 63 32 1 1 62 8 70 2.19e-13 66.2
MsG0580027997.01.T02 AT2G42830 46.774 62 33 0 1 62 23 84 2.63e-13 67.4
MsG0580027997.01.T02 AT2G14210 47.619 63 32 1 1 62 8 70 2.80e-13 67.0
MsG0580027997.01.T02 AT2G42830 46.774 62 33 0 1 62 23 84 2.86e-13 67.4
MsG0580027997.01.T02 AT3G58780 46.774 62 33 0 1 62 23 84 3.19e-13 67.0
MsG0580027997.01.T02 AT5G23260 45.122 82 39 2 1 76 24 105 3.21e-13 67.4
MsG0580027997.01.T02 AT4G18960 46.774 62 33 0 1 62 24 85 3.28e-13 67.0
MsG0580027997.01.T02 AT5G10140 47.619 63 32 1 1 62 8 70 3.51e-13 65.9
MsG0580027997.01.T02 AT5G23260 45.122 82 39 2 1 76 8 89 3.53e-13 67.0
MsG0580027997.01.T02 AT3G58780 46.774 62 33 0 1 62 29 90 3.63e-13 67.0
MsG0580027997.01.T02 AT1G77980 39.759 83 49 1 1 82 8 90 3.76e-13 67.8
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MsG0580027997.01.T02 AT5G10140 47.619 63 32 1 1 62 8 70 3.83e-13 66.2
MsG0580027997.01.T02 AT5G10140 47.619 63 32 1 1 62 8 70 4.76e-13 65.5
MsG0580027997.01.T02 AT5G13790 46.774 62 33 0 1 62 8 69 5.52e-13 66.6
MsG0580027997.01.T02 AT5G13790 46.774 62 33 0 1 62 8 69 5.87e-13 66.6
MsG0580027997.01.T02 AT1G29962 26.115 157 102 4 1 143 14 170 6.61e-13 65.1
MsG0580027997.01.T02 AT3G58780 46.774 62 33 0 1 62 23 84 7.00e-13 66.6
MsG0580027997.01.T02 AT1G69120 47.619 63 32 1 1 62 8 70 7.32e-13 65.9
MsG0580027997.01.T02 AT3G61120 50.000 62 31 0 1 62 8 69 7.48e-13 66.2
MsG0580027997.01.T02 AT1G22130 36.559 93 58 1 1 92 8 100 8.02e-13 67.0
MsG0580027997.01.T02 AT1G26310 46.032 63 33 1 1 62 8 70 1.53e-12 65.5
MsG0580027997.01.T02 AT1G69120 47.619 63 32 1 1 62 8 70 1.55e-12 65.5
MsG0580027997.01.T02 AT1G77950 42.857 70 38 2 1 69 8 76 1.92e-12 65.1
MsG0580027997.01.T02 AT1G77950 42.857 70 38 2 1 69 8 76 1.92e-12 65.1
MsG0580027997.01.T02 AT1G77950 42.857 70 38 2 1 69 8 76 1.92e-12 65.1
MsG0580027997.01.T02 AT1G77950 42.857 70 38 2 1 69 8 76 1.92e-12 65.1
MsG0580027997.01.T02 AT5G15800 50.794 63 30 1 1 62 8 70 2.01e-12 65.1
MsG0580027997.01.T02 AT5G15800 50.794 63 30 1 1 62 8 70 3.40e-12 64.3
MsG0580027997.01.T02 AT1G71692 46.875 64 33 1 1 63 8 71 6.11e-12 63.2
MsG0580027997.01.T02 AT2G03710 40.426 94 48 3 1 86 8 101 6.50e-12 62.4
MsG0580027997.01.T02 AT2G03710 40.426 94 48 3 1 86 8 101 7.20e-12 63.5
MsG0580027997.01.T02 AT2G03710 40.426 94 48 3 1 86 8 101 7.64e-12 63.5
MsG0580027997.01.T02 AT2G22540 58.000 50 21 0 1 50 8 57 7.71e-12 63.2
MsG0580027997.01.T02 AT5G65050 46.032 63 33 1 1 62 8 70 3.10e-11 60.5
MsG0580027997.01.T02 AT5G20240 43.750 64 34 1 1 62 8 71 3.62e-11 59.7
MsG0580027997.01.T02 AT5G20240 43.750 64 34 1 1 62 8 71 3.73e-11 60.8
MsG0580027997.01.T02 AT3G02310 46.032 63 33 1 1 62 8 70 3.88e-11 60.5
MsG0580027997.01.T02 AT1G24260 47.619 63 32 1 1 62 8 70 6.59e-11 60.5
MsG0580027997.01.T02 AT3G02310 46.032 63 33 1 1 62 8 70 6.85e-11 60.5
MsG0580027997.01.T02 AT5G65060 46.032 63 33 1 1 62 8 70 9.95e-11 59.3
MsG0580027997.01.T01 AT5G60440 48.677 189 90 3 5 190 3 187 4.38e-52 171
MsG0580027997.01.T01 AT1G65360 41.410 227 118 6 5 225 3 220 3.76e-42 143
MsG0580027997.01.T01 AT2G24840 48.734 158 76 2 9 163 63 218 3.00e-39 137
MsG0580027997.01.T01 AT1G01530 40.526 190 105 3 4 192 2 184 6.67e-38 132
MsG0580027997.01.T01 AT4G36590 36.820 239 122 8 5 226 3 229 1.74e-34 124
MsG0580027997.01.T01 AT3G04100 31.056 161 107 2 2 158 7 167 6.37e-26 100
MsG0580027997.01.T01 AT1G72350 35.542 166 69 5 9 169 43 175 3.20e-22 91.3
MsG0580027997.01.T01 AT2G34440 38.739 111 67 1 9 119 2 111 4.18e-21 87.0
MsG0580027997.01.T01 AT3G66656 55.882 68 30 0 9 76 2 69 1.23e-20 85.9
MsG0580027997.01.T01 AT4G37940 32.948 173 85 5 9 154 2 170 3.29e-19 83.2
MsG0580027997.01.T01 AT2G45650 55.882 68 30 0 9 76 2 69 9.76e-19 82.8
MsG0580027997.01.T01 AT2G45660 54.412 68 31 0 10 77 3 70 1.20e-18 80.1
MsG0580027997.01.T01 AT5G51870 54.167 72 33 0 5 76 21 92 1.90e-18 80.5
MsG0580027997.01.T01 AT1G28460 28.902 173 113 3 5 170 4 173 2.29e-18 80.1
MsG0580027997.01.T01 AT2G45660 54.412 68 31 0 10 77 3 70 2.98e-18 80.5
MsG0580027997.01.T01 AT4G37940 32.240 183 87 6 9 154 2 184 4.62e-18 80.5
MsG0580027997.01.T01 AT2G22630 32.240 183 87 6 9 154 2 184 4.88e-18 80.1
MsG0580027997.01.T01 AT2G22630 32.240 183 87 6 9 154 2 184 4.88e-18 80.1
MsG0580027997.01.T01 AT4G22950 48.611 72 37 0 10 81 3 74 6.35e-18 78.6
MsG0580027997.01.T01 AT4G09960 50.000 68 34 0 9 76 2 69 7.58e-18 79.7
MsG0580027997.01.T01 AT4G09960 50.000 68 34 0 9 76 3 70 9.30e-18 79.7
MsG0580027997.01.T01 AT4G09960 50.000 68 34 0 9 76 2 69 9.42e-18 79.7
MsG0580027997.01.T01 AT5G51870 55.224 67 30 0 10 76 3 69 1.05e-17 78.2
MsG0580027997.01.T01 AT4G09960 50.000 68 34 0 9 76 12 79 1.15e-17 79.7
MsG0580027997.01.T01 AT5G51870 55.224 67 30 0 10 76 3 69 1.33e-17 78.6
MsG0580027997.01.T01 AT5G51870 54.286 70 32 0 7 76 10 79 1.70e-17 79.0
MsG0580027997.01.T01 AT4G09960 50.000 68 34 0 9 76 28 95 1.77e-17 79.3
MsG0580027997.01.T01 AT4G22950 49.296 71 36 0 10 80 3 73 1.86e-17 78.6
MsG0580027997.01.T01 AT4G22950 49.296 71 36 0 10 80 3 73 1.86e-17 78.6
MsG0580027997.01.T01 AT5G51870 55.224 67 30 0 10 76 3 69 2.53e-17 78.2
MsG0580027997.01.T01 AT5G23260 36.242 149 67 4 5 125 14 162 2.54e-17 79.0
MsG0580027997.01.T01 AT5G10140 50.725 69 33 1 9 76 2 70 2.77e-17 77.0
MsG0580027997.01.T01 AT3G57390 54.412 68 31 0 9 76 2 69 3.76e-17 77.8
MsG0580027997.01.T01 AT4G09960 50.000 68 34 0 9 76 97 164 3.98e-17 79.3
MsG0580027997.01.T01 AT5G10140 50.725 69 33 1 9 76 2 70 4.79e-17 76.6
MsG0580027997.01.T01 AT3G57230 47.059 68 36 0 9 76 2 69 5.54e-17 75.5
MsG0580027997.01.T01 AT5G10140 50.725 69 33 1 9 76 2 70 5.61e-17 76.6
MsG0580027997.01.T01 AT5G62165 52.239 67 32 0 10 76 3 69 5.88e-17 74.3
MsG0580027997.01.T01 AT5G62165 52.239 67 32 0 10 76 3 69 6.59e-17 75.5
MsG0580027997.01.T01 AT5G62165 52.239 67 32 0 10 76 3 69 6.59e-17 75.5
MsG0580027997.01.T01 AT5G62165 52.239 67 32 0 10 76 3 69 6.59e-17 75.5
MsG0580027997.01.T01 AT5G10140 50.725 69 33 1 9 76 2 70 7.02e-17 76.3
MsG0580027997.01.T01 AT1G29962 27.545 167 107 4 5 157 4 170 7.02e-17 76.3
MsG0580027997.01.T01 AT5G23260 46.739 92 43 2 5 90 14 105 7.52e-17 77.8
MsG0580027997.01.T01 AT3G57390 54.412 68 31 0 9 76 2 69 7.70e-17 77.4
MsG0580027997.01.T01 AT5G62165 52.239 67 32 0 10 76 3 69 7.97e-17 75.5
MsG0580027997.01.T01 AT5G62165 52.239 67 32 0 10 76 3 69 7.97e-17 75.5
MsG0580027997.01.T01 AT5G62165 52.239 67 32 0 10 76 3 69 7.97e-17 75.5
MsG0580027997.01.T01 AT5G62165 52.239 67 32 0 10 76 3 69 7.97e-17 75.5
MsG0580027997.01.T01 AT5G62165 52.239 67 32 0 10 76 3 69 7.97e-17 75.5
MsG0580027997.01.T01 AT5G23260 36.000 150 68 4 9 130 2 151 8.46e-17 77.4
MsG0580027997.01.T01 AT4G18960 48.000 75 39 0 2 76 11 85 9.55e-17 77.4
MsG0580027997.01.T01 AT2G42830 46.053 76 41 0 1 76 9 84 1.38e-16 76.6
MsG0580027997.01.T01 AT3G30260 30.822 146 71 4 9 124 2 147 1.41e-16 76.6
MsG0580027997.01.T01 AT2G42830 46.053 76 41 0 1 76 9 84 1.50e-16 76.6
MsG0580027997.01.T01 AT2G22540 50.000 68 34 0 9 76 2 69 1.58e-16 76.6
MsG0580027997.01.T01 AT2G22540 50.000 68 34 0 9 76 2 69 1.58e-16 76.6
MsG0580027997.01.T01 AT5G62165 52.239 67 32 0 10 76 3 69 1.74e-16 75.5
MsG0580027997.01.T01 AT5G62165 52.239 67 32 0 10 76 3 69 1.74e-16 75.5
MsG0580027997.01.T01 AT3G57230 47.059 68 36 0 9 76 2 69 1.76e-16 76.3
MsG0580027997.01.T01 AT3G57230 47.059 68 36 0 9 76 2 69 1.76e-16 76.3
MsG0580027997.01.T01 AT3G58780 49.296 71 36 0 6 76 14 84 1.99e-16 76.3
MsG0580027997.01.T01 AT5G62165 52.239 67 32 0 10 76 3 69 2.00e-16 75.5
MsG0580027997.01.T01 AT5G62165 52.239 67 32 0 10 76 3 69 2.00e-16 75.5
MsG0580027997.01.T01 AT5G62165 52.239 67 32 0 10 76 3 69 2.00e-16 75.5
MsG0580027997.01.T01 AT3G58780 49.296 71 36 0 6 76 20 90 2.21e-16 76.3
MsG0580027997.01.T01 AT4G37940 48.529 68 35 0 9 76 2 69 2.33e-16 74.7
MsG0580027997.01.T01 AT4G24540 52.941 68 32 0 9 76 2 69 2.55e-16 75.5
MsG0580027997.01.T01 AT5G23260 47.727 88 40 2 9 90 2 89 2.73e-16 75.9
MsG0580027997.01.T01 AT3G58780 46.667 75 40 0 2 76 10 84 4.52e-16 75.9
MsG0580027997.01.T01 AT5G51860 52.239 67 32 0 10 76 3 69 4.76e-16 74.3
MsG0580027997.01.T01 AT3G54340 48.571 70 34 1 9 76 2 71 5.16e-16 74.7
MsG0580027997.01.T01 AT5G13790 50.000 68 34 0 9 76 2 69 5.42e-16 75.5
MsG0580027997.01.T01 AT5G13790 50.000 68 34 0 9 76 2 69 5.83e-16 75.5
MsG0580027997.01.T01 AT1G77980 41.573 89 51 1 9 96 2 90 7.11e-16 75.9
MsG0580027997.01.T01 AT5G51860 52.239 67 32 0 10 76 3 69 7.45e-16 73.9
MsG0580027997.01.T01 AT3G61120 51.471 68 33 0 9 76 2 69 1.06e-15 74.3
MsG0580027997.01.T01 AT1G22130 38.384 99 60 1 9 106 2 100 1.42e-15 75.1
MsG0580027997.01.T01 AT5G60910 49.275 69 34 1 9 76 2 70 1.77e-15 73.6
MsG0580027997.01.T01 AT5G65050 49.275 69 34 1 9 76 2 70 2.18e-15 72.0
MsG0580027997.01.T01 AT2G14210 49.275 69 34 1 9 76 2 70 2.80e-15 72.8
MsG0580027997.01.T01 AT1G77950 44.737 76 40 2 9 83 2 76 3.36e-15 73.2
MsG0580027997.01.T01 AT1G77950 44.737 76 40 2 9 83 2 76 3.36e-15 73.2
MsG0580027997.01.T01 AT1G77950 44.737 76 40 2 9 83 2 76 3.36e-15 73.2
MsG0580027997.01.T01 AT1G77950 44.737 76 40 2 9 83 2 76 3.36e-15 73.2
MsG0580027997.01.T01 AT4G11880 48.611 72 36 1 10 80 3 74 3.57e-15 71.6
MsG0580027997.01.T01 AT4G11880 48.611 72 36 1 10 80 3 74 3.57e-15 71.6
MsG0580027997.01.T01 AT1G17310 52.632 76 34 1 8 83 47 120 4.16e-15 72.0
MsG0580027997.01.T01 AT2G14210 49.275 69 34 1 9 76 2 70 4.31e-15 72.4
MsG0580027997.01.T01 AT5G65050 49.275 69 34 1 9 76 2 70 4.50e-15 71.2
MsG0580027997.01.T01 AT5G65050 49.275 69 34 1 9 76 2 70 4.50e-15 71.6
MsG0580027997.01.T01 AT5G65050 49.275 69 34 1 9 76 2 70 5.21e-15 71.2
MsG0580027997.01.T01 AT5G15800 50.725 69 33 1 9 76 2 70 5.38e-15 72.4
MsG0580027997.01.T01 AT4G11880 48.611 72 36 1 10 80 3 74 5.38e-15 72.0
MsG0580027997.01.T01 AT4G11880 48.611 72 36 1 10 80 3 74 5.38e-15 72.0
MsG0580027997.01.T01 AT1G26310 46.377 69 36 1 9 76 2 70 5.66e-15 72.4
MsG0580027997.01.T01 AT1G17310 52.632 76 34 1 8 83 58 131 6.43e-15 72.0
MsG0580027997.01.T01 AT1G69120 33.858 127 67 3 9 134 2 112 7.25e-15 71.6
MsG0580027997.01.T01 AT2G03710 42.000 100 50 3 9 100 2 101 8.75e-15 72.0
MsG0580027997.01.T01 AT5G15800 50.725 69 33 1 9 76 2 70 8.85e-15 72.0
MsG0580027997.01.T01 AT2G03710 42.000 100 50 3 9 100 2 101 9.04e-15 72.0
MsG0580027997.01.T01 AT2G03710 42.000 100 50 3 9 100 2 101 9.86e-15 70.5
MsG0580027997.01.T01 AT1G69120 46.377 69 36 1 9 76 2 70 1.50e-14 71.2
MsG0580027997.01.T01 AT5G20240 47.143 70 35 1 9 76 2 71 2.22e-14 68.6
MsG0580027997.01.T01 AT5G20240 47.143 70 35 1 9 76 2 71 2.68e-14 69.7
MsG0580027997.01.T01 AT1G28450 27.011 174 117 4 5 168 4 177 3.55e-14 68.9
MsG0580027997.01.T01 AT5G65060 47.826 69 35 1 9 76 2 70 3.81e-14 68.9
MsG0580027997.01.T01 AT5G65060 47.826 69 35 1 9 76 2 70 4.11e-14 68.9
MsG0580027997.01.T01 AT2G22540 57.143 56 24 0 9 64 2 57 4.23e-14 69.7
MsG0580027997.01.T01 AT5G65060 47.826 69 35 1 9 76 2 70 4.51e-14 68.9
MsG0580027997.01.T01 AT5G65070 42.169 83 44 2 9 90 2 81 5.42e-14 67.4
MsG0580027997.01.T01 AT1G71692 47.143 70 36 1 9 77 2 71 7.65e-14 68.6
MsG0580027997.01.T01 AT5G65070 42.169 83 44 2 9 90 2 81 9.13e-14 68.2
MsG0580027997.01.T01 AT3G58780 50.820 61 30 0 6 66 14 74 9.14e-14 68.9
MsG0580027997.01.T01 AT3G02310 46.377 69 36 1 9 76 2 70 1.10e-13 67.8
MsG0580027997.01.T01 AT1G47760 31.304 115 69 2 9 115 2 114 1.15e-13 67.4
MsG0580027997.01.T01 AT3G58780 47.692 65 34 0 2 66 10 74 1.30e-13 68.9
MsG0580027997.01.T01 AT1G24260 55.357 56 25 0 9 64 2 57 1.65e-13 68.2
MsG0580027997.01.T01 AT1G24260 47.826 69 35 1 9 76 2 70 1.75e-13 68.2
MsG0580027997.01.T01 AT1G24260 47.826 69 35 1 9 76 2 70 1.79e-13 68.2
MsG0580027997.01.T01 AT5G65070 42.169 83 44 2 9 90 2 81 1.86e-13 67.8
MsG0580027997.01.T01 AT3G02310 46.377 69 36 1 9 76 2 70 1.95e-13 68.2
MsG0580027997.01.T01 AT5G65070 42.169 83 44 2 9 90 2 81 2.15e-13 67.4
MsG0580027997.01.T01 AT5G65080 40.230 87 48 2 1 86 1 84 1.57e-12 64.7
MsG0580027997.01.T01 AT5G65070 49.123 57 29 0 9 65 2 58 1.86e-12 65.1
MsG0580027997.01.T01 AT1G18750 37.662 77 46 1 9 83 2 78 1.11e-11 63.9
MsG0580027997.01.T01 AT4G37435 41.667 72 41 1 9 79 2 73 1.28e-11 62.0
MsG0580027997.01.T01 AT1G18750 37.662 77 46 1 9 83 2 78 1.34e-11 63.9
MsG0580027997.01.T01 AT1G18750 37.662 77 46 1 9 83 2 78 1.40e-11 63.9
MsG0580027997.01.T01 AT5G65080 43.548 62 35 0 1 62 1 62 1.82e-11 62.0
MsG0580027997.01.T01 AT5G49490 38.636 88 47 2 5 85 41 128 5.54e-11 61.6
MsG0580027997.01.T01 AT2G26320 41.892 74 41 1 5 76 14 87 5.96e-11 58.2

Find 56 sgRNAs with CRISPR-Local

Find 62 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTGCATGATGTCATCATTT+TGG 0.109779 5:+72718607 None:intergenic
GACCTTATTCATCTCATAAA+TGG 0.175011 5:+72718437 None:intergenic
TTTGTTTGGTTTCAACAATA+TGG 0.259787 5:-72718199 MsG0580027997.01.T01:CDS
GAACCATTTCCACCATAAAA+TGG 0.280176 5:+72718315 None:intergenic
TCTATGATCGTTTCAACATT+TGG 0.289536 5:+72718654 None:intergenic
CACCATAAAATGGAAGGGTT+TGG 0.299445 5:+72718325 None:intergenic
GTTGAATCTTGTTGAGGATT+TGG 0.322565 5:+72718264 None:intergenic
TTGTTGCTCAACATGCTGAT+AGG 0.333786 5:-72718371 MsG0580027997.01.T01:CDS
CCTGATTTGTCTTTCGCACC+TGG 0.338707 5:+72718481 None:intergenic
ATTATACAAGAAGGCTTTAG+AGG 0.340263 5:-72718406 MsG0580027997.01.T01:CDS
ACCATAAAATGGAAGGGTTT+GGG 0.373429 5:+72718326 None:intergenic
TTGTTTGGTTTCAACAATAT+GGG 0.380840 5:-72718198 MsG0580027997.01.T01:CDS
AGCGAGCTTTGCACCCTTTG+TGG 0.386397 5:-72718735 MsG0580027997.01.T01:CDS
TGCTGATAGGGTTGAAATGC+AGG 0.408645 5:-72718358 MsG0580027997.01.T01:CDS
ATGTTGCAACCACATTTGTT+TGG 0.415267 5:-72718213 MsG0580027997.01.T01:CDS
ACCTTATTCATCTCATAAAT+GGG 0.419947 5:+72718438 None:intergenic
TCCCATTTATGAGATGAATA+AGG 0.420859 5:-72718439 MsG0580027997.01.T01:CDS
CGCAATATATGCACCACAAA+GGG 0.465418 5:+72718722 None:intergenic
AACAAATGTGGTTGCAACAT+AGG 0.466580 5:+72718216 None:intergenic
GGTGGAAATGGTTCATCCTC+TGG 0.474365 5:-72718306 MsG0580027997.01.T01:CDS
CCTTCTTGTATAATTCAAGT+TGG 0.484620 5:+72718415 None:intergenic
GAAGGTGGACATGGTCCCCA+TGG 0.500041 5:-72718174 MsG0580027997.01.T01:CDS
TGACATCATGCAATTAATTG+AGG 0.500210 5:-72718598 MsG0580027997.01.T01:CDS
CCAGGTGCGAAAGACAAATC+AGG 0.504787 5:-72718481 MsG0580027997.01.T01:CDS
GCTCGCGCACCTTGGCTCTA+CGG 0.510044 5:+72718571 None:intergenic
AATGAAAATACTTTCTCAGC+AGG 0.517037 5:+72718684 None:intergenic
ACAAATGTGGTTGCAACATA+GGG 0.521813 5:+72718217 None:intergenic
GGTTTCAACAATATGGGAGA+AGG 0.530678 5:-72718192 MsG0580027997.01.T01:CDS
GCCAAGGTGCGCGAGCTCAA+TGG 0.535008 5:-72718564 MsG0580027997.01.T01:CDS
ACCATTGAGCTCGCGCACCT+TGG 0.535093 5:+72718563 None:intergenic
CCAACTTGAATTATACAAGA+AGG 0.537115 5:-72718415 MsG0580027997.01.T01:CDS
CATTTCCACCATAAAATGGA+AGG 0.539519 5:+72718319 None:intergenic
GAGCTCAATGGTATATTGAC+TGG 0.544330 5:-72718552 MsG0580027997.01.T01:CDS
TGTTGCTCAACATGCTGATA+GGG 0.545180 5:-72718370 MsG0580027997.01.T01:CDS
CTTTCTCGAAGCGCCGTAGT+GGG 0.553366 5:-72718773 MsG0580027997.01.T01:CDS
CCGTGAGAATGAGCTAATCC+AGG 0.557926 5:-72718499 MsG0580027997.01.T01:CDS
GCTCATATCAAAAGAACCCA+TGG 0.571548 5:+72718157 None:intergenic
GGATTTGGCTGATGCTCAAG+AGG 0.571835 5:+72718279 None:intergenic
ACTTTCTCGAAGCGCCGTAG+TGG 0.571963 5:-72718774 MsG0580027997.01.T01:CDS
ACTGGTATGAAAGATGCAAT+CGG 0.573096 5:-72718534 MsG0580027997.01.T01:CDS
ATTTCCACCATAAAATGGAA+GGG 0.573765 5:+72718320 None:intergenic
TTCAACAATATGGGAGAAGG+TGG 0.593736 5:-72718189 MsG0580027997.01.T01:CDS
CTCATATCAAAAGAACCCAT+GGG 0.612341 5:+72718158 None:intergenic
AATATGGGAGAAGGTGGACA+TGG 0.617316 5:-72718183 MsG0580027997.01.T01:CDS
TGTGCTTTAGCCATGTCAAG+CGG 0.619256 5:-72718864 None:intergenic
AAGGTGGACATGGTCCCCAT+GGG 0.619822 5:-72718173 MsG0580027997.01.T01:CDS
GGAAAGGTTGAATCTTGTTG+AGG 0.620573 5:+72718258 None:intergenic
TCAAGCGGAAAGAAAACTCA+AGG 0.621333 5:-72718849 MsG0580027997.01.T01:CDS
CCTGGATTAGCTCATTCTCA+CGG 0.627343 5:+72718499 None:intergenic
CTTTCTTGAAGAGCCCACTA+CGG 0.627906 5:+72718760 None:intergenic
ACGCAATATATGCACCACAA+AGG 0.628806 5:+72718721 None:intergenic
TGAGGATTACCGTAGAGCCA+AGG 0.649629 5:-72718580 MsG0580027997.01.T01:CDS
GCTGATAGGGTTGAAATGCA+GGG 0.657468 5:-72718357 MsG0580027997.01.T01:CDS
ATGCTCAAGAGGCATGCCAG+AGG 0.675147 5:+72718290 None:intergenic
TTGTTGAAACCAAACAAATG+TGG 0.689946 5:+72718204 None:intergenic
TCATATCAAAAGAACCCATG+GGG 0.745957 5:+72718159 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! ACCTTATTCATCTCATAAAT+GGG + Chr5:72718581-72718600 None:intergenic 25.0%
!! TTGTTTGGTTTCAACAATAT+GGG - Chr5:72718818-72718837 MsG0580027997.01.T01:CDS 25.0%
!! TTTGTTTGGTTTCAACAATA+TGG - Chr5:72718817-72718836 MsG0580027997.01.T01:CDS 25.0%
AATGAAAATACTTTCTCAGC+AGG + Chr5:72718335-72718354 None:intergenic 30.0%
ATTTCCACCATAAAATGGAA+GGG + Chr5:72718699-72718718 None:intergenic 30.0%
CCAACTTGAATTATACAAGA+AGG - Chr5:72718601-72718620 MsG0580027997.01.T01:CDS 30.0%
CCTTCTTGTATAATTCAAGT+TGG + Chr5:72718604-72718623 None:intergenic 30.0%
GACCTTATTCATCTCATAAA+TGG + Chr5:72718582-72718601 None:intergenic 30.0%
TCCCATTTATGAGATGAATA+AGG - Chr5:72718577-72718596 MsG0580027997.01.T01:CDS 30.0%
TCTATGATCGTTTCAACATT+TGG + Chr5:72718365-72718384 None:intergenic 30.0%
TGACATCATGCAATTAATTG+AGG - Chr5:72718418-72718437 MsG0580027997.01.T01:CDS 30.0%
TTGTTGAAACCAAACAAATG+TGG + Chr5:72718815-72718834 None:intergenic 30.0%
! AGACAAATCAGGAACATTTT+TGG - Chr5:72718546-72718565 MsG0580027997.01.T01:CDS 30.0%
! ATTATACAAGAAGGCTTTAG+AGG - Chr5:72718610-72718629 MsG0580027997.01.T01:CDS 30.0%
! ATTGCATGATGTCATCATTT+TGG + Chr5:72718412-72718431 None:intergenic 30.0%
! TTGCATGATGTCATCATTTT+GGG + Chr5:72718411-72718430 None:intergenic 30.0%
!!! GCTGAGAAAGTATTTTCATT+TGG - Chr5:72718335-72718354 MsG0580027997.01.T01:CDS 30.0%
AACAAATGTGGTTGCAACAT+AGG + Chr5:72718803-72718822 None:intergenic 35.0%
ACAAATGTGGTTGCAACATA+GGG + Chr5:72718802-72718821 None:intergenic 35.0%
ACCATAAAATGGAAGGGTTT+GGG + Chr5:72718693-72718712 None:intergenic 35.0%
ACTGGTATGAAAGATGCAAT+CGG - Chr5:72718482-72718501 MsG0580027997.01.T01:CDS 35.0%
ATGAAAAAACTCTGCTGGAA+AGG + Chr5:72718777-72718796 None:intergenic 35.0%
ATGTTGCAACCACATTTGTT+TGG - Chr5:72718803-72718822 MsG0580027997.01.T01:CDS 35.0%
CATTTCCACCATAAAATGGA+AGG + Chr5:72718700-72718719 None:intergenic 35.0%
GAACCATTTCCACCATAAAA+TGG + Chr5:72718704-72718723 None:intergenic 35.0%
GTTGAATCTTGTTGAGGATT+TGG + Chr5:72718755-72718774 None:intergenic 35.0%
!! CAAATCAGGAACATTTTTGG+TGG - Chr5:72718549-72718568 MsG0580027997.01.T01:CDS 35.0%
!! CTTCCATTTTATGGTGGAAA+TGG - Chr5:72718698-72718717 MsG0580027997.01.T01:CDS 35.0%
ACGCAATATATGCACCACAA+AGG + Chr5:72718298-72718317 None:intergenic 40.0%
CACCATAAAATGGAAGGGTT+TGG + Chr5:72718694-72718713 None:intergenic 40.0%
CGCAATATATGCACCACAAA+GGG + Chr5:72718297-72718316 None:intergenic 40.0%
GAGCTCAATGGTATATTGAC+TGG - Chr5:72718464-72718483 MsG0580027997.01.T01:CDS 40.0%
GGAAAGGTTGAATCTTGTTG+AGG + Chr5:72718761-72718780 None:intergenic 40.0%
GGGTTATGAAAAAACTCTGC+TGG + Chr5:72718782-72718801 None:intergenic 40.0%
GGTTTCAACAATATGGGAGA+AGG - Chr5:72718824-72718843 MsG0580027997.01.T01:CDS 40.0%
TCAAGCGGAAAGAAAACTCA+AGG - Chr5:72718167-72718186 MsG0580027997.01.T01:CDS 40.0%
TGTTGCTCAACATGCTGATA+GGG - Chr5:72718646-72718665 MsG0580027997.01.T01:CDS 40.0%
TTCAACAATATGGGAGAAGG+TGG - Chr5:72718827-72718846 MsG0580027997.01.T01:CDS 40.0%
TTGTTGCTCAACATGCTGAT+AGG - Chr5:72718645-72718664 MsG0580027997.01.T01:CDS 40.0%
! ACCCAAACCCTTCCATTTTA+TGG - Chr5:72718689-72718708 MsG0580027997.01.T01:CDS 40.0%
! ATGATGTCATCATTTTGGGC+TGG + Chr5:72718407-72718426 None:intergenic 40.0%
! CAAACCCTTCCATTTTATGG+TGG - Chr5:72718692-72718711 MsG0580027997.01.T01:CDS 40.0%
AATATGGGAGAAGGTGGACA+TGG - Chr5:72718833-72718852 MsG0580027997.01.T01:CDS 45.0%
CTTTCTTGAAGAGCCCACTA+CGG + Chr5:72718259-72718278 None:intergenic 45.0%
GCTGATAGGGTTGAAATGCA+GGG - Chr5:72718659-72718678 MsG0580027997.01.T01:CDS 45.0%
TGCTGATAGGGTTGAAATGC+AGG - Chr5:72718658-72718677 MsG0580027997.01.T01:CDS 45.0%
!! CCTGGATTAGCTCATTCTCA+CGG + Chr5:72718520-72718539 None:intergenic 45.0%
CCAGGTGCGAAAGACAAATC+AGG - Chr5:72718535-72718554 MsG0580027997.01.T01:CDS 50.0%
CCGTGAGAATGAGCTAATCC+AGG - Chr5:72718517-72718536 MsG0580027997.01.T01:CDS 50.0%
GGATTTGGCTGATGCTCAAG+AGG + Chr5:72718740-72718759 None:intergenic 50.0%
GGTGGAAATGGTTCATCCTC+TGG - Chr5:72718710-72718729 MsG0580027997.01.T01:CDS 50.0%
TGAGGATTACCGTAGAGCCA+AGG - Chr5:72718436-72718455 MsG0580027997.01.T01:CDS 50.0%
! CCTGATTTGTCTTTCGCACC+TGG + Chr5:72718538-72718557 None:intergenic 50.0%
AAGGTGGACATGGTCCCCAT+GGG - Chr5:72718843-72718862 MsG0580027997.01.T01:CDS 55.0%
AGCGAGCTTTGCACCCTTTG+TGG - Chr5:72718281-72718300 MsG0580027997.01.T01:CDS 55.0%
! ATGCTCAAGAGGCATGCCAG+AGG + Chr5:72718729-72718748 None:intergenic 55.0%
!! ACTTTCTCGAAGCGCCGTAG+TGG - Chr5:72718242-72718261 MsG0580027997.01.T01:CDS 55.0%
!! CTTTCTCGAAGCGCCGTAGT+GGG - Chr5:72718243-72718262 MsG0580027997.01.T01:CDS 55.0%
ACCATTGAGCTCGCGCACCT+TGG + Chr5:72718456-72718475 None:intergenic 60.0%
GAAGGTGGACATGGTCCCCA+TGG - Chr5:72718842-72718861 MsG0580027997.01.T01:CDS 60.0%
GCCAAGGTGCGCGAGCTCAA+TGG - Chr5:72718452-72718471 MsG0580027997.01.T01:CDS 65.0%
!! GCTCGCGCACCTTGGCTCTA+CGG + Chr5:72718448-72718467 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr5 gene 72718164 72718874 72718164 ID=MsG0580027997.01;Name=MsG0580027997.01
Chr5 mRNA 72718164 72718874 72718164 ID=MsG0580027997.01.T01;Parent=MsG0580027997.01;Name=MsG0580027997.01.T01;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|236
Chr5 exon 72718164 72718874 72718164 ID=MsG0580027997.01.T01:exon:4631;Parent=MsG0580027997.01.T01
Chr5 CDS 72718164 72718874 72718164 ID=MsG0580027997.01.T01:cds;Parent=MsG0580027997.01.T01
Chr5 mRNA 72718164 72718832 72718164 ID=MsG0580027997.01.T02;Parent=MsG0580027997.01;Name=MsG0580027997.01.T02;_AED=0.03;_eAED=0.03;_QI=0|-1|0|1|-1|0|1|0|222
Chr5 exon 72718164 72718832 72718164 ID=MsG0580027997.01.T02:exon:4632;Parent=MsG0580027997.01.T02
Chr5 CDS 72718164 72718832 72718164 ID=MsG0580027997.01.T02:cds;Parent=MsG0580027997.01.T02
Gene Sequence

>MsG0580027997.01.T02

ATGAAAAAGATGAGCAATGAAAGTAACTTGCAAGTGACTTTCTCGAAGCGCCGTAGTGGGCTCTTCAAGAAAGCTAGCGAGCTTTGCACCCTTTGTGGTGCATATATTGCGTTAATCATATTCTCGCCTGCTGAGAAAGTATTTTCATTTGGTCATCCAAATGTTGAAACGATCATAGATCGTTATCTCTCTCAAGTTCCAGCCCAAAATGATGACATCATGCAATTAATTGAGGATTACCGTAGAGCCAAGGTGCGCGAGCTCAATGGTATATTGACTGGTATGAAAGATGCAATCGGCATCGATAAGAACCGTGAGAATGAGCTAATCCAGGTGCGAAAGACAAATCAGGAACATTTTTGGTGGACTCGTCCCATTTATGAGATGAATAAGGTCCAACTTGAATTATACAAGAAGGCTTTAGAGGATCTTCTTAAACTTGTTGCTCAACATGCTGATAGGGTTGAAATGCAGGGTACTTCTACCCAAACCCTTCCATTTTATGGTGGAAATGGTTCATCCTCTGGCATGCCTCTTGAGCATCAGCCAAATCCTCAACAAGATTCAACCTTTCCAGCAGAGTTTTTTCATAACCCTATGTTGCAACCACATTTGTTTGGTTTCAACAATATGGGAGAAGGTGGACATGGTCCCCATGGGTTCTTTTGA

>MsG0580027997.01.T01

ATGTCAAGCGGAAAGAAAACTCAAGGTCGTAAGAAGATTGAGATGAAAAAGATGAGCAATGAAAGTAACTTGCAAGTGACTTTCTCGAAGCGCCGTAGTGGGCTCTTCAAGAAAGCTAGCGAGCTTTGCACCCTTTGTGGTGCATATATTGCGTTAATCATATTCTCGCCTGCTGAGAAAGTATTTTCATTTGGTCATCCAAATGTTGAAACGATCATAGATCGTTATCTCTCTCAAGTTCCAGCCCAAAATGATGACATCATGCAATTAATTGAGGATTACCGTAGAGCCAAGGTGCGCGAGCTCAATGGTATATTGACTGGTATGAAAGATGCAATCGGCATCGATAAGAACCGTGAGAATGAGCTAATCCAGGTGCGAAAGACAAATCAGGAACATTTTTGGTGGACTCGTCCCATTTATGAGATGAATAAGGTCCAACTTGAATTATACAAGAAGGCTTTAGAGGATCTTCTTAAACTTGTTGCTCAACATGCTGATAGGGTTGAAATGCAGGGTACTTCTACCCAAACCCTTCCATTTTATGGTGGAAATGGTTCATCCTCTGGCATGCCTCTTGAGCATCAGCCAAATCCTCAACAAGATTCAACCTTTCCAGCAGAGTTTTTTCATAACCCTATGTTGCAACCACATTTGTTTGGTTTCAACAATATGGGAGAAGGTGGACATGGTCCCCATGGGTTCTTTTGA

Protein sequence

>MsG0580027997.01.T02

MKKMSNESNLQVTFSKRRSGLFKKASELCTLCGAYIALIIFSPAEKVFSFGHPNVETIIDRYLSQVPAQNDDIMQLIEDYRRAKVRELNGILTGMKDAIGIDKNRENELIQVRKTNQEHFWWTRPIYEMNKVQLELYKKALEDLLKLVAQHADRVEMQGTSTQTLPFYGGNGSSSGMPLEHQPNPQQDSTFPAEFFHNPMLQPHLFGFNNMGEGGHGPHGFF*

>MsG0580027997.01.T01

MSSGKKTQGRKKIEMKKMSNESNLQVTFSKRRSGLFKKASELCTLCGAYIALIIFSPAEKVFSFGHPNVETIIDRYLSQVPAQNDDIMQLIEDYRRAKVRELNGILTGMKDAIGIDKNRENELIQVRKTNQEHFWWTRPIYEMNKVQLELYKKALEDLLKLVAQHADRVEMQGTSTQTLPFYGGNGSSSGMPLEHQPNPQQDSTFPAEFFHNPMLQPHLFGFNNMGEGGHGPHGFF*