AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580028089.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028089.01.T01 MTR_5g068570 93.210 486 5 2 4 461 3 488 0.0 917
MsG0580028089.01.T01 MTR_3g093520 83.195 482 52 3 9 461 3 484 0.0 799
MsG0580028089.01.T01 MTR_7g074450 69.280 472 103 5 24 461 14 477 0.0 645
MsG0580028089.01.T01 MTR_4g102610 52.759 453 139 12 43 461 24 435 9.07e-142 414
MsG0580028089.01.T01 MTR_4g102580 56.277 231 73 7 218 441 27 236 3.48e-72 229
MsG0580028089.01.T01 MTR_6g460700 61.404 57 19 2 9 62 39 95 4.80e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028089.01.T01 AT3G54190 74.477 478 82 4 11 461 3 467 0.0 717
MsG0580028089.01.T01 AT2G38630 73.069 479 86 5 11 461 4 467 0.0 698
MsG0580028089.01.T01 AT2G38630 74.425 391 68 3 11 373 4 390 0.0 590
MsG0580028089.01.T01 AT2G38630 68.000 325 69 5 11 307 4 321 1.70e-148 426

Find 139 sgRNAs with CRISPR-Local

Find 333 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTAACTGTGCTCCTTATTC+TGG 0.142146 5:-74397562 None:intergenic
CTGACCTTGTGATTTCTTAT+TGG 0.143621 5:+74397702 MsG0580028089.01.T01:three_prime_UTR
GAAATTCTGAGTTTGAAATT+TGG 0.195479 5:-74393134 None:intergenic
TCACCTGCTATGAGAGCTTC+TGG 0.219490 5:+74397772 MsG0580028089.01.T01:three_prime_UTR
GTCCTTGTCACTTACAATTT+AGG 0.232905 5:+74397836 MsG0580028089.01.T01:three_prime_UTR
GGTGGTGGCGGCAGTGGTGG+TGG 0.258515 5:+74393233 MsG0580028089.01.T01:CDS
GTAGAGTTTGATGATGTAAA+TGG 0.288059 5:+74396023 MsG0580028089.01.T01:CDS
TGAGTTTGAAATTTGGATCT+AGG 0.317112 5:-74393127 None:intergenic
ACTAAAATATTTACCTATCC+TGG 0.325125 5:-74396067 None:intergenic
GGTGGTGGTGGCGGCAGTGG+TGG 0.327987 5:+74393230 MsG0580028089.01.T01:CDS
AATTACATACATCAAGGATT+TGG 0.331971 5:-74396649 None:intergenic
ACGATGGAAGAAGGACCTTT+TGG 0.333777 5:-74395368 None:intergenic
GGTCGTGGTGGTGCCGGTGA+TGG 0.335031 5:+74393320 MsG0580028089.01.T01:CDS
GATCATGAAATGAAATGAAA+TGG 0.339047 5:-74393011 None:intergenic
GAAAGCAGGACTCCAGAATA+AGG 0.350284 5:+74397550 MsG0580028089.01.T01:CDS
ACTAAACCCACGAACACTTT+TGG 0.362386 5:-74393387 None:intergenic
CAAGAAGCATATCCTTTCAT+TGG 0.363629 5:-74395644 None:intergenic
TAAAATGTTGCTGATATTGA+TGG 0.364645 5:-74397421 None:intergenic
ATCATGAAATGAAATGAAAT+GGG 0.366132 5:-74393010 None:intergenic
ATGGGTTTATCAACAGTGTT+AGG 0.376927 5:+74393339 MsG0580028089.01.T01:CDS
GAAGGTGGTGGTGGCGGCAG+TGG 0.379128 5:+74393227 MsG0580028089.01.T01:CDS
TGCGGTGACGACTGTTCAAC+TGG 0.387089 5:+74397507 MsG0580028089.01.T01:CDS
CACCTGCTATGAGAGCTTCT+GGG 0.389971 5:+74397773 MsG0580028089.01.T01:three_prime_UTR
CACCACCACCTTCCATTTCA+CGG 0.390171 5:-74393217 None:intergenic
AAGCTTCTTATAACTTCATC+AGG 0.395989 5:-74395676 None:intergenic
GTCGTGGTGGTGCCGGTGAT+GGG 0.402381 5:+74393321 MsG0580028089.01.T01:CDS
TAACAAGTTAAAGAAACAAC+CGG 0.416058 5:-74398005 None:intergenic
GTGGCGGCAGTGGTGGTGGG+AGG 0.419848 5:+74393237 MsG0580028089.01.T01:CDS
ATGTTGTTTGTGTTGCAATC+AGG 0.422140 5:-74396910 None:intergenic
ATTCCGCAATATCCGTTTGA+AGG 0.430337 5:+74393430 MsG0580028089.01.T01:CDS
GTAAGTGTCTTGCAAAGATA+AGG 0.436057 5:+74397448 MsG0580028089.01.T01:CDS
GGAGGGAGTTGGCCGTGAAA+TGG 0.436317 5:+74393205 MsG0580028089.01.T01:exon
CAGTTGCATTCCTTTGCAAT+GGG 0.439356 5:-74397486 None:intergenic
TCGAATCTGAGTCTTTGAAA+TGG 0.440922 5:+74395991 MsG0580028089.01.T01:CDS
GTGGTGGCGGCAGTGGTGGT+GGG 0.444643 5:+74393234 MsG0580028089.01.T01:CDS
GAGCACAGTTAGAGAAGCCT+TGG 0.446199 5:+74397572 MsG0580028089.01.T01:CDS
ACAATAAATATATGAGATGT+TGG 0.447171 5:+74397968 MsG0580028089.01.T01:three_prime_UTR
AAAAGAGCAAATCCAGCATC+TGG 0.454290 5:-74395969 None:intergenic
AAGCAAGGTCGTGGTGGTGC+CGG 0.460182 5:+74393314 MsG0580028089.01.T01:CDS
CAACTGGTGGCTGTAATTCA+AGG 0.463270 5:+74397523 MsG0580028089.01.T01:CDS
CGTGAAATGGAAGGTGGTGG+TGG 0.465267 5:+74393218 MsG0580028089.01.T01:exon
TAGAGTTTGATGATGTAAAT+GGG 0.465900 5:+74396024 MsG0580028089.01.T01:CDS
GGAACAATTGATTCTCATAC+AGG 0.466753 5:-74396804 None:intergenic
CAGTTCTATTTCGAAAGGTC+AGG 0.466814 5:-74396825 None:intergenic
CTTTGAAATGCAGAAGCACC+AGG 0.469827 5:+74395764 MsG0580028089.01.T01:CDS
TACAGGCAACAGGCATGGTC+TGG 0.470678 5:+74397641 MsG0580028089.01.T01:CDS
GTCCAAGACCTTGTTGTGGC+CGG 0.473658 5:+74393273 MsG0580028089.01.T01:CDS
ATGAGATCTATACAGGCAAC+AGG 0.476395 5:+74397631 MsG0580028089.01.T01:CDS
CGGCCAACTCCCTCCGATGA+AGG 0.476583 5:-74393197 None:intergenic
CGCCGGCCACAACAAGGTCT+TGG 0.479424 5:-74393275 None:intergenic
AGGAGGGTTCAGCCAGATGC+TGG 0.480217 5:+74395957 MsG0580028089.01.T01:CDS
GATCGCAATGAGATCTATAC+AGG 0.483836 5:+74397624 MsG0580028089.01.T01:CDS
TACATACATCAAGGATTTGG+AGG 0.487961 5:-74396646 None:intergenic
TCTGAGTCTTTGAAATGGCC+AGG 0.492056 5:+74395996 MsG0580028089.01.T01:CDS
GCTCCTTCATCGGAGGGAGT+TGG 0.493254 5:+74393194 MsG0580028089.01.T01:five_prime_UTR
ATTTCTACCAAAAGTGTTCG+TGG 0.493930 5:+74393380 MsG0580028089.01.T01:CDS
TGCTATTCCGATGAATAAGA+TGG 0.497519 5:-74396565 None:intergenic
CATTCAACCATCTTATTCAT+CGG 0.499367 5:+74396558 MsG0580028089.01.T01:CDS
GGTATATACTTACTCAATCC+TGG 0.499463 5:-74395782 None:intergenic
GCAGTTGCATTCCTTTGCAA+TGG 0.503588 5:-74397487 None:intergenic
AAAATCCTCTCAATAGAAGA+TGG 0.512260 5:+74396521 MsG0580028089.01.T01:CDS
TAAGTGTCTTGCAAAGATAA+GGG 0.513770 5:+74397449 MsG0580028089.01.T01:CDS
GAAATGGAAGGTGGTGGTGG+CGG 0.517775 5:+74393221 MsG0580028089.01.T01:exon
AGCAGGTGAGGGGTGAGGAC+AGG 0.519075 5:-74397758 None:intergenic
TTTCTACCAAAAGTGTTCGT+GGG 0.521591 5:+74393381 MsG0580028089.01.T01:CDS
CTAAAATATTTACCTATCCT+GGG 0.521778 5:-74396066 None:intergenic
CTTTCGAGGATCACCTTCTG+TGG 0.523315 5:+74396884 MsG0580028089.01.T01:CDS
AGAACTTGTAACTTCTTTCG+AGG 0.523322 5:+74396870 MsG0580028089.01.T01:CDS
TATGATACATATGATCCAAA+AGG 0.524311 5:+74395353 MsG0580028089.01.T01:CDS
TAATTCAAGGAAGCGAAAGC+AGG 0.524790 5:+74397536 MsG0580028089.01.T01:CDS
ATCACAATTCACAACAATCA+AGG 0.526383 5:-74397732 None:intergenic
GAGCCACCGTTCACAATTCA+CGG 0.530492 5:-74393175 None:intergenic
AGGGAAGTTATACTGTATGC+TGG 0.533503 5:+74397917 MsG0580028089.01.T01:three_prime_UTR
GAGTCATTGTCTGAAGGAAA+TGG 0.537465 5:+74396988 MsG0580028089.01.T01:CDS
CTCATAGCAGGTGAGGGGTG+AGG 0.543376 5:-74397763 None:intergenic
GTGAACGGTGGCTCCTTCAT+CGG 0.544834 5:+74393184 MsG0580028089.01.T01:five_prime_UTR
ACCTTGTTGTGGCCGGCGTG+TGG 0.544995 5:+74393280 MsG0580028089.01.T01:CDS
AATGGCAATACGATGGAAGA+AGG 0.548928 5:-74395377 None:intergenic
TGACATCATCTTGTTAAGAC+AGG 0.554481 5:+74392908 None:intergenic
GTTGGATAATGTTTGCGTCC+CGG 0.555585 5:+74397986 MsG0580028089.01.T01:three_prime_UTR
AACGGTGGCTCCTTCATCGG+AGG 0.557897 5:+74393187 MsG0580028089.01.T01:five_prime_UTR
ACCTGCTATGAGAGCTTCTG+GGG 0.561353 5:+74397774 MsG0580028089.01.T01:three_prime_UTR
TTGTTGTGGCCGGCGTGTGG+TGG 0.563437 5:+74393283 MsG0580028089.01.T01:CDS
TGAGAAAAGGAACCTTCAAA+CGG 0.564827 5:-74393442 None:intergenic
GCGAAGAAGAAGCAAGGTCG+TGG 0.567056 5:+74393305 MsG0580028089.01.T01:CDS
ATCTATACAGGCAACAGGCA+TGG 0.569220 5:+74397636 MsG0580028089.01.T01:CDS
TCATCAAACTCTACAAAACC+TGG 0.569346 5:-74396014 None:intergenic
TACAGGAAAATAAATGCAGA+TGG 0.569436 5:-74396787 None:intergenic
TGACATACTCTGCCCAGGAT+AGG 0.571913 5:+74396054 MsG0580028089.01.T01:CDS
TAATAGCTTTCCCATTGCAA+AGG 0.572720 5:+74397476 MsG0580028089.01.T01:CDS
AAGAGCAGTAATGTCTTCCA+AGG 0.582856 5:-74397589 None:intergenic
CAGTACCATCTTCTATTGAG+AGG 0.585743 5:-74396526 None:intergenic
GGAGTTGGCCGTGAAATGGA+AGG 0.587151 5:+74393209 MsG0580028089.01.T01:exon
CACACACACCAGATTGTGCA+AGG 0.591742 5:-74395457 None:intergenic
GAAGCTCTCATAGCAGGTGA+GGG 0.592838 5:-74397769 None:intergenic
TTTCAAAGAACTGTAACTGT+CGG 0.596748 5:-74395749 None:intergenic
GGCCGTGAAATGGAAGGTGG+TGG 0.597875 5:+74393215 MsG0580028089.01.T01:exon
AGCCACAGTTCTATTTCGAA+AGG 0.602024 5:-74396830 None:intergenic
GTGGCTGTGTGGAACTTCCG+TGG 0.603784 5:+74396847 MsG0580028089.01.T01:CDS
GCTTACGGAAGTTAGCAAAA+CGG 0.605021 5:+74396753 MsG0580028089.01.T01:CDS
TTTATACCGTGAATTGTGAA+CGG 0.605894 5:+74393169 MsG0580028089.01.T01:five_prime_UTR
TAAATCAACAACATGATCCC+CGG 0.608013 5:-74396470 None:intergenic
AGTACTGACATACTCTGCCC+AGG 0.608287 5:+74396049 MsG0580028089.01.T01:CDS
CATATACATAACAAGTGACC+AGG 0.608793 5:+74396930 MsG0580028089.01.T01:CDS
AGTATGATATGATGAGATCC+TGG 0.609520 5:-74396948 None:intergenic
TGCAATCAGGATGCCACAGA+AGG 0.609682 5:-74396897 None:intergenic
AGAAGCTCTCATAGCAGGTG+AGG 0.609951 5:-74397770 None:intergenic
ACCACACGCCGGCCACAACA+AGG 0.612090 5:-74393281 None:intergenic
ATTTAGGCATGTTCTGCATG+TGG 0.612582 5:+74397852 MsG0580028089.01.T01:three_prime_UTR
ACTGTTGATAAACCCATCAC+CGG 0.614575 5:-74393333 None:intergenic
GAACCTTCAAACGGATATTG+CGG 0.621364 5:-74393433 None:intergenic
TCATGAAATGAAATGAAATG+GGG 0.624219 5:-74393009 None:intergenic
TAAGATTATTGAAATTGTAG+CGG 0.628511 5:+74395415 MsG0580028089.01.T01:CDS
ACGGTGGCTCCTTCATCGGA+GGG 0.636047 5:+74393188 MsG0580028089.01.T01:five_prime_UTR
GGCATGGTCTGGTTCATGTG+TGG 0.636460 5:+74397652 MsG0580028089.01.T01:CDS
CAAGCCAATAAGAAATCACA+AGG 0.640491 5:-74397706 None:intergenic
ATCATCTTGTTAAGACAGGT+AGG 0.640889 5:+74392912 None:intergenic
TGCCTAAATTGTAAGTGACA+AGG 0.651042 5:-74397838 None:intergenic
GTGGTGGCGAAGAAGAAGCA+AGG 0.655830 5:+74393299 MsG0580028089.01.T01:CDS
TCTGATGAGTCATTGTCTGA+AGG 0.658222 5:+74396982 MsG0580028089.01.T01:CDS
TCTCATCATATCATACTGCA+AGG 0.658840 5:+74396954 MsG0580028089.01.T01:CDS
TCTTATTCATCGGAATAGCA+AGG 0.665657 5:+74396568 MsG0580028089.01.T01:CDS
TTGCTGCAGAGACCAATGAA+AGG 0.677144 5:+74395632 MsG0580028089.01.T01:intron
AAGAAGAAGCAAGGTCGTGG+TGG 0.677858 5:+74393308 MsG0580028089.01.T01:CDS
GAAATAGAACTGTGGCTGTG+TGG 0.679446 5:+74396836 MsG0580028089.01.T01:CDS
ATACCGTGAATTGTGAACGG+TGG 0.680862 5:+74393172 MsG0580028089.01.T01:five_prime_UTR
TCTTCTTCGCCACCACACGC+CGG 0.681323 5:-74393292 None:intergenic
AAGCTCTCATAGCAGGTGAG+GGG 0.683339 5:-74397768 None:intergenic
TCAAGTCCAAGACCTTGTTG+TGG 0.684451 5:+74393269 MsG0580028089.01.T01:CDS
GTTGGCCGTGAAATGGAAGG+TGG 0.685934 5:+74393212 MsG0580028089.01.T01:exon
AAGAAGTTACAAGTTCTCCA+CGG 0.690206 5:-74396864 None:intergenic
CCTGCTATGAGAGCTTCTGG+GGG 0.692864 5:+74397775 MsG0580028089.01.T01:three_prime_UTR
GGTGACGACTGTTCAACTGG+TGG 0.696358 5:+74397510 MsG0580028089.01.T01:CDS
ATTGCAAAGGAATGCAACTG+CGG 0.699889 5:+74397489 MsG0580028089.01.T01:CDS
AACAAGTTAAAGAAACAACC+GGG 0.704147 5:-74398004 None:intergenic
GACCTTTCGAAATAGAACTG+TGG 0.709860 5:+74396828 MsG0580028089.01.T01:CDS
ACACACACCAGATTGTGCAA+GGG 0.713361 5:-74395456 None:intergenic
TATTCATCGGAATAGCAAGG+TGG 0.740005 5:+74396571 MsG0580028089.01.T01:CDS
GTGTGTGCAGCATTTAACCG+AGG 0.786396 5:+74395473 MsG0580028089.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GTTAAAAAAATTTAATTGAT+AGG + Chr5:74394760-74394779 MsG0580028089.01.T01:intron 10.0%
!! AACATACTAGAAATAAAAAA+AGG + Chr5:74394455-74394474 MsG0580028089.01.T01:intron 15.0%
!! ACAAATTCAATAATTAATGT+AGG + Chr5:74394678-74394697 MsG0580028089.01.T01:intron 15.0%
!! AGAGACAAAATAAAAATAAT+TGG - Chr5:74397062-74397081 None:intergenic 15.0%
!! GAGACAAAATAAAAATAATT+GGG - Chr5:74397061-74397080 None:intergenic 15.0%
!! GTAATTAAAAGTAAGATATA+TGG - Chr5:74396713-74396732 None:intergenic 15.0%
!! TATATTTACAAAATTCTTGA+TGG + Chr5:74396119-74396138 MsG0580028089.01.T01:intron 15.0%
!!! ATAATAAATATTGATTTGCA+CGG - Chr5:74394858-74394877 None:intergenic 15.0%
!!! ATCTAGGTTTTTTAAATTTT+TGG - Chr5:74393114-74393133 None:intergenic 15.0%
!!! TCAATATTTTTTTTTTTGAG+AGG + Chr5:74397122-74397141 MsG0580028089.01.T01:intron 15.0%
!!! TTTTAAATCTAAATCTATGA+TGG + Chr5:74393511-74393530 MsG0580028089.01.T01:intron 15.0%
!! AAATAATTGGGAAAGAAAAA+TGG - Chr5:74397049-74397068 None:intergenic 20.0%
!! AATAATTGGGAAAGAAAAAT+GGG - Chr5:74397048-74397067 None:intergenic 20.0%
!! AATATAAATCAGACATAAGT+AGG - Chr5:74395320-74395339 None:intergenic 20.0%
!! ACAAATTCGATAATTAATGT+AGG + Chr5:74394516-74394535 MsG0580028089.01.T01:intron 20.0%
!! ACAATAAATATATGAGATGT+TGG + Chr5:74397968-74397987 MsG0580028089.01.T01:three_prime_UTR 20.0%
!! ATATAAATCAGACATAAGTA+GGG - Chr5:74395319-74395338 None:intergenic 20.0%
!! ATCATGAAATGAAATGAAAT+GGG - Chr5:74393013-74393032 None:intergenic 20.0%
!! CAAATTCGATAATTAATGTA+GGG + Chr5:74394517-74394536 MsG0580028089.01.T01:intron 20.0%
!! CATTAATAATTGTCATAAGA+TGG + Chr5:74393574-74393593 MsG0580028089.01.T01:intron 20.0%
!! TAAGATTATTGAAATTGTAG+CGG + Chr5:74395415-74395434 MsG0580028089.01.T01:CDS 20.0%
!! TAATCAATTCTGTTAAATAG+CGG + Chr5:74395069-74395088 MsG0580028089.01.T01:intron 20.0%
!! TAGGAGTTATAAAATAATAG+AGG - Chr5:74395806-74395825 None:intergenic 20.0%
!! TTAAAAGTAAGATATATGGA+TGG - Chr5:74396709-74396728 None:intergenic 20.0%
!!! AAACTCAGAATTTCAATTTT+AGG + Chr5:74393143-74393162 MsG0580028089.01.T01:five_prime_UTR 20.0%
!!! AACTCAGAATTTCAATTTTA+GGG + Chr5:74393144-74393163 MsG0580028089.01.T01:five_prime_UTR 20.0%
!!! ACTGTATGTTTTTATTTTTG+AGG + Chr5:74397897-74397916 MsG0580028089.01.T01:three_prime_UTR 20.0%
!!! AGATTTTTGGAAAAATGATA+TGG - Chr5:74394992-74395011 None:intergenic 20.0%
!!! AGGTTTTTTAAATTTTTGGT+GGG - Chr5:74393110-74393129 None:intergenic 20.0%
!!! ATTTGTATCATTTGTTGTAA+AGG + Chr5:74397350-74397369 MsG0580028089.01.T01:intron 20.0%
!!! CTGTATGTTTTTATTTTTGA+GGG + Chr5:74397898-74397917 MsG0580028089.01.T01:three_prime_UTR 20.0%
!!! GATGATTTTTTGTATGTTAA+AGG + Chr5:74393785-74393804 MsG0580028089.01.T01:intron 20.0%
!!! GCAATCTGTAATAATTTTTT+AGG + Chr5:74394049-74394068 MsG0580028089.01.T01:intron 20.0%
!!! GTAATTTTCTCATTTTTACA+TGG + Chr5:74396666-74396685 MsG0580028089.01.T01:intron 20.0%
!!! GTTTTGTTTAGTTTGTTTTT+GGG + Chr5:74396404-74396423 MsG0580028089.01.T01:intron 20.0%
!!! TAATAAATATTGATTTGCAC+GGG - Chr5:74394857-74394876 None:intergenic 20.0%
!!! TAGGTTTTTTAAATTTTTGG+TGG - Chr5:74393111-74393130 None:intergenic 20.0%
!!! TATGATTTTTTTTATCAGTC+CGG + Chr5:74396451-74396470 MsG0580028089.01.T01:intron 20.0%
!!! TCTTACTTTTAATTACCTTT+AGG + Chr5:74396717-74396736 MsG0580028089.01.T01:intron 20.0%
!!! TGTCTGATTTATATTTTTAC+AGG + Chr5:74395325-74395344 MsG0580028089.01.T01:intron 20.0%
!!! TGTTTTGTTTAGTTTGTTTT+TGG + Chr5:74396403-74396422 MsG0580028089.01.T01:intron 20.0%
!!! TTTTGTTTAGTTTGTTTTTG+GGG + Chr5:74396405-74396424 MsG0580028089.01.T01:intron 20.0%
! AAAGAATTGAGATTGAGAAA+AGG - Chr5:74393458-74393477 None:intergenic 25.0%
! AAATCAGTGTTGTCAAATAT+CGG - Chr5:74395022-74395041 None:intergenic 25.0%
! AACAAGAATGAAGTTGTATA+AGG - Chr5:74396431-74396450 None:intergenic 25.0%
! AAGGAGATAAAAATTCGTTA+TGG + Chr5:74394474-74394493 MsG0580028089.01.T01:intron 25.0%
! AATCACAATTCAAATTCTAC+AGG - Chr5:74393691-74393710 None:intergenic 25.0%
! AATTACATACATCAAGGATT+TGG - Chr5:74396652-74396671 None:intergenic 25.0%
! ACTAAAATATTTACCTATCC+TGG - Chr5:74396070-74396089 None:intergenic 25.0%
! ATAATTGGGAAAGAAAAATG+GGG - Chr5:74397047-74397066 None:intergenic 25.0%
! ATCACAATTCAAATTCTACA+GGG - Chr5:74393690-74393709 None:intergenic 25.0%
! ATTTACAAAATTCTTGATGG+TGG + Chr5:74396122-74396141 MsG0580028089.01.T01:intron 25.0%
! CAATAATTAATGTAGGAAAG+CGG + Chr5:74394685-74394704 MsG0580028089.01.T01:intron 25.0%
! CTAAAATATTTACCTATCCT+GGG - Chr5:74396069-74396088 None:intergenic 25.0%
! GATCATGAAATGAAATGAAA+TGG - Chr5:74393014-74393033 None:intergenic 25.0%
! GATTGTATGAGTAATGTTAT+TGG + Chr5:74393741-74393760 MsG0580028089.01.T01:intron 25.0%
! GCAATCTGTAATAATTTCTT+AGG + Chr5:74393859-74393878 MsG0580028089.01.T01:intron 25.0%
! GCAATTTAAATGTTTGCTTT+AGG + Chr5:74394216-74394235 MsG0580028089.01.T01:intron 25.0%
! TAAAATGTTGCTGATATTGA+TGG - Chr5:74397424-74397443 None:intergenic 25.0%
! TATAAATCAGACATAAGTAG+GGG - Chr5:74395318-74395337 None:intergenic 25.0%
! TATGATACATATGATCCAAA+AGG + Chr5:74395353-74395372 MsG0580028089.01.T01:CDS 25.0%
! TCATGAAATGAAATGAAATG+GGG - Chr5:74393012-74393031 None:intergenic 25.0%
! TGAAAAATTATATCTCTGTC+AGG - Chr5:74397315-74397334 None:intergenic 25.0%
! TGAGAAAATTACATACATCA+AGG - Chr5:74396658-74396677 None:intergenic 25.0%
!! AGTACTTTAGTTTATCTCAT+AGG + Chr5:74397176-74397195 MsG0580028089.01.T01:intron 25.0%
!! ATTTATGTTGAAGTTTTGCT+GGG + Chr5:74393661-74393680 MsG0580028089.01.T01:intron 25.0%
!! GAAATTCTGAGTTTGAAATT+TGG - Chr5:74393137-74393156 None:intergenic 25.0%
!! GCAATCTGTAATAATTTTTC+AGG + Chr5:74394113-74394132 MsG0580028089.01.T01:intron 25.0%
!! TATTTATGTTGAAGTTTTGC+TGG + Chr5:74393660-74393679 MsG0580028089.01.T01:intron 25.0%
!! TTAGACCTTTTTCTCAAAAA+TGG - Chr5:74395398-74395417 None:intergenic 25.0%
!!! AATATCAGCAACATTTTAAC+TGG + Chr5:74397426-74397445 MsG0580028089.01.T01:CDS 25.0%
!!! ATGATTTTTTTTATCAGTCC+GGG + Chr5:74396452-74396471 MsG0580028089.01.T01:intron 25.0%
!!! GAGTAATGTTATTGGTTTAT+AGG + Chr5:74393749-74393768 MsG0580028089.01.T01:intron 25.0%
!!! GATTTTTTTTTGCTTGTAGA+GGG + Chr5:74393707-74393726 MsG0580028089.01.T01:intron 25.0%
!!! TAGAGTTTGATGATGTAAAT+GGG + Chr5:74396024-74396043 MsG0580028089.01.T01:CDS 25.0%
!!! TATTGCCATTTTTGAGAAAA+AGG + Chr5:74395390-74395409 MsG0580028089.01.T01:CDS 25.0%
!!! TGATTTTTTTTTGCTTGTAG+AGG + Chr5:74393706-74393725 MsG0580028089.01.T01:intron 25.0%
!!! TGGTTTTTTTTATATGCATG+TGG + Chr5:74393531-74393550 MsG0580028089.01.T01:intron 25.0%
!!! TTTTTGAAAGTGTTGTGAAA+TGG - Chr5:74392950-74392969 None:intergenic 25.0%
AAAAATTCGTTATGGAAGAG+AGG + Chr5:74394482-74394501 MsG0580028089.01.T01:intron 30.0%
AAAATCCTCTCAATAGAAGA+TGG + Chr5:74396521-74396540 MsG0580028089.01.T01:CDS 30.0%
AACATAAAATGCCGAAAACA+AGG - Chr5:74395513-74395532 None:intergenic 30.0%
AAGCTTCTTATAACTTCATC+AGG - Chr5:74395679-74395698 None:intergenic 30.0%
AATGGTTATTGTGATCTTAC+TGG + Chr5:74394150-74394169 MsG0580028089.01.T01:intron 30.0%
ATAAATCAGACATAAGTAGG+GGG - Chr5:74395317-74395336 None:intergenic 30.0%
ATCACAATTCACAACAATCA+AGG - Chr5:74397735-74397754 None:intergenic 30.0%
ATCTTGTTCAATGTTATCGA+TGG + Chr5:74394876-74394895 MsG0580028089.01.T01:intron 30.0%
ATGTACAAGAGATTAAGATC+AGG + Chr5:74396248-74396267 MsG0580028089.01.T01:intron 30.0%
CAAGCATTAAAACATGTGAA+GGG - Chr5:74396366-74396385 None:intergenic 30.0%
CATTCAACCATCTTATTCAT+CGG + Chr5:74396558-74396577 MsG0580028089.01.T01:CDS 30.0%
TAACATAAACCACAACTACA+TGG - Chr5:74396321-74396340 None:intergenic 30.0%
TAAGTGTCTTGCAAAGATAA+GGG + Chr5:74397449-74397468 MsG0580028089.01.T01:CDS 30.0%
TACAGGAAAATAAATGCAGA+TGG - Chr5:74396790-74396809 None:intergenic 30.0%
TAGGGTTTGATTGTTTAGTT+TGG + Chr5:74393629-74393648 MsG0580028089.01.T01:intron 30.0%
TCAAGCATTAAAACATGTGA+AGG - Chr5:74396367-74396386 None:intergenic 30.0%
TTAATTGATAGGATCAGTGT+CGG + Chr5:74394771-74394790 MsG0580028089.01.T01:intron 30.0%
TTTATACCGTGAATTGTGAA+CGG + Chr5:74393169-74393188 MsG0580028089.01.T01:five_prime_UTR 30.0%
TTTCAAAGAACTGTAACTGT+CGG - Chr5:74395752-74395771 None:intergenic 30.0%
! ACTGTTGTTTGAAATTGAAC+TGG + Chr5:74397256-74397275 MsG0580028089.01.T01:intron 30.0%
! ATTTTTCCAAAAATCTGCCA+TGG + Chr5:74394996-74395015 MsG0580028089.01.T01:intron 30.0%
! CTCTGTTTTCCAGATATATA+AGG + Chr5:74395937-74395956 MsG0580028089.01.T01:intron 30.0%
! GTTTTCCAGATATATAAGGA+GGG + Chr5:74395941-74395960 MsG0580028089.01.T01:intron 30.0%
! TGAGTTTGAAATTTGGATCT+AGG - Chr5:74393130-74393149 None:intergenic 30.0%
! TGTTTGAAATTGAACTGGAA+TGG + Chr5:74397261-74397280 MsG0580028089.01.T01:intron 30.0%
! TGTTTTCCAGATATATAAGG+AGG + Chr5:74395940-74395959 MsG0580028089.01.T01:intron 30.0%
!! CTATTGAGAGGATTTTTAGA+GGG - Chr5:74396517-74396536 None:intergenic 30.0%
!! GTAGAGTTTGATGATGTAAA+TGG + Chr5:74396023-74396042 MsG0580028089.01.T01:CDS 30.0%
!! TCTATTGAGAGGATTTTTAG+AGG - Chr5:74396518-74396537 None:intergenic 30.0%
!!! ATTTCTGCTTTTTCATACAG+CGG + Chr5:74397395-74397414 MsG0580028089.01.T01:intron 30.0%
!!! GAGATATTTTAGCATAGAAC+AGG - Chr5:74395920-74395939 None:intergenic 30.0%
!!! TGATTTTTTTTATCAGTCCG+GGG + Chr5:74396453-74396472 MsG0580028089.01.T01:intron 30.0%
AAAATGATATGGCCAATTCG+CGG - Chr5:74394981-74395000 None:intergenic 35.0%
AAGAAGTTACAAGTTCTCCA+CGG - Chr5:74396867-74396886 None:intergenic 35.0%
ACATTTGCACATGAGACTTT+GGG + Chr5:74394245-74394264 MsG0580028089.01.T01:intron 35.0%
AGAACTTGTAACTTCTTTCG+AGG + Chr5:74396870-74396889 MsG0580028089.01.T01:CDS 35.0%
AGTATGATATGATGAGATCC+TGG - Chr5:74396951-74396970 None:intergenic 35.0%
ATGGGTTTATCAACAGTGTT+AGG + Chr5:74393339-74393358 MsG0580028089.01.T01:CDS 35.0%
ATGTGGATCTGTAATTGCTT+AGG + Chr5:74394275-74394294 MsG0580028089.01.T01:intron 35.0%
CAAGCCAATAAGAAATCACA+AGG - Chr5:74397709-74397728 None:intergenic 35.0%
CATATACATAACAAGTGACC+AGG + Chr5:74396930-74396949 MsG0580028089.01.T01:CDS 35.0%
CGATAATTAATGTAGGGAAG+AGG + Chr5:74394523-74394542 MsG0580028089.01.T01:intron 35.0%
CTGACCTTGTGATTTCTTAT+TGG + Chr5:74397702-74397721 MsG0580028089.01.T01:three_prime_UTR 35.0%
GGTATATACTTACTCAATCC+TGG - Chr5:74395785-74395804 None:intergenic 35.0%
GTAAGTGTCTTGCAAAGATA+AGG + Chr5:74397448-74397467 MsG0580028089.01.T01:CDS 35.0%
GTAGGAAAGCGGAAAATTAT+GGG + Chr5:74394696-74394715 MsG0580028089.01.T01:intron 35.0%
GTAGGGAAGAGGAAAATTAT+GGG + Chr5:74394534-74394553 MsG0580028089.01.T01:intron 35.0%
TAAATCAACAACATGATCCC+CGG - Chr5:74396473-74396492 None:intergenic 35.0%
TAATAGCTTTCCCATTGCAA+AGG + Chr5:74397476-74397495 MsG0580028089.01.T01:CDS 35.0%
TACATACATCAAGGATTTGG+AGG - Chr5:74396649-74396668 None:intergenic 35.0%
TATCCTTGATTGACAACACT+GGG + Chr5:74395228-74395247 MsG0580028089.01.T01:intron 35.0%
TCATCAAACTCTACAAAACC+TGG - Chr5:74396017-74396036 None:intergenic 35.0%
TCTATAGAATTGTTGCGTAG+TGG + Chr5:74395179-74395198 MsG0580028089.01.T01:intron 35.0%
TCTCAAAAATGGCAATACGA+TGG - Chr5:74395387-74395406 None:intergenic 35.0%
TCTCATCATATCATACTGCA+AGG + Chr5:74396954-74396973 MsG0580028089.01.T01:CDS 35.0%
TCTTATTCATCGGAATAGCA+AGG + Chr5:74396568-74396587 MsG0580028089.01.T01:CDS 35.0%
TGAGAAAAGGAACCTTCAAA+CGG - Chr5:74393445-74393464 None:intergenic 35.0%
TGCCTAAATTGTAAGTGACA+AGG - Chr5:74397841-74397860 None:intergenic 35.0%
TGCTATTCCGATGAATAAGA+TGG - Chr5:74396568-74396587 None:intergenic 35.0%
TGTAGGAAAGCGGAAAATTA+TGG + Chr5:74394695-74394714 MsG0580028089.01.T01:intron 35.0%
TGTAGGGAAGAGGAAAATTA+TGG + Chr5:74394533-74394552 MsG0580028089.01.T01:intron 35.0%
TTATCCTTGATTGACAACAC+TGG + Chr5:74395227-74395246 MsG0580028089.01.T01:intron 35.0%
TTGTATGTTAAAGGACGAGT+CGG + Chr5:74393794-74393813 MsG0580028089.01.T01:intron 35.0%
TTGTTCAATGTTATCGATGG+CGG + Chr5:74394879-74394898 MsG0580028089.01.T01:intron 35.0%
TTGTTTCGTGATACACTGTT+TGG + Chr5:74395123-74395142 MsG0580028089.01.T01:intron 35.0%
! CAAGAAGCATATCCTTTCAT+TGG - Chr5:74395647-74395666 None:intergenic 35.0%
! GGAACAATTGATTCTCATAC+AGG - Chr5:74396807-74396826 None:intergenic 35.0%
! GTCCTTGTCACTTACAATTT+AGG + Chr5:74397836-74397855 MsG0580028089.01.T01:three_prime_UTR 35.0%
! TACATGGTAGCGTTGTATAT+TGG - Chr5:74396305-74396324 None:intergenic 35.0%
! TCGAATCTGAGTCTTTGAAA+TGG + Chr5:74395991-74396010 MsG0580028089.01.T01:CDS 35.0%
!! AGACTTTGGGATGTTTAATG+TGG + Chr5:74394258-74394277 MsG0580028089.01.T01:intron 35.0%
!! ATATTGATTTGCACGGGTAT+TGG - Chr5:74394851-74394870 None:intergenic 35.0%
!! ATTTCTACCAAAAGTGTTCG+TGG + Chr5:74393380-74393399 MsG0580028089.01.T01:CDS 35.0%
!! TTTCTACCAAAAGTGTTCGT+GGG + Chr5:74393381-74393400 MsG0580028089.01.T01:CDS 35.0%
!!! GTGTCTTTTTTTGTTGAGCA+TGG - Chr5:74395839-74395858 None:intergenic 35.0%
!!! TTTCTGCTTTTTCATACAGC+GGG + Chr5:74397396-74397415 MsG0580028089.01.T01:intron 35.0%
AAAAGAGCAAATCCAGCATC+TGG - Chr5:74395972-74395991 None:intergenic 40.0%
AAAGCGGAAAATTATGGGTG+CGG + Chr5:74394701-74394720 MsG0580028089.01.T01:intron 40.0%
AAATCACGCGCGAAATCATA+AGG - Chr5:74393833-74393852 None:intergenic 40.0%
AAGAGCAGTAATGTCTTCCA+AGG - Chr5:74397592-74397611 None:intergenic 40.0%
AATGGCAATACGATGGAAGA+AGG - Chr5:74395380-74395399 None:intergenic 40.0%
ACCTTGTATATGCTGCTAGA+GGG - Chr5:74396181-74396200 None:intergenic 40.0%
AGAACAGGACAGCACAAAAT+TGG - Chr5:74395905-74395924 None:intergenic 40.0%
AGACATAAGTAGGGGGTAAT+GGG - Chr5:74395310-74395329 None:intergenic 40.0%
AGCCACAGTTCTATTTCGAA+AGG - Chr5:74396833-74396852 None:intergenic 40.0%
AGGGAAGTTATACTGTATGC+TGG + Chr5:74397917-74397936 MsG0580028089.01.T01:three_prime_UTR 40.0%
ATGAGATCTATACAGGCAAC+AGG + Chr5:74397631-74397650 MsG0580028089.01.T01:CDS 40.0%
ATTCCGCAATATCCGTTTGA+AGG + Chr5:74393430-74393449 MsG0580028089.01.T01:CDS 40.0%
ATTGCAAAGGAATGCAACTG+CGG + Chr5:74397489-74397508 MsG0580028089.01.T01:CDS 40.0%
ATTTAGGCATGTTCTGCATG+TGG + Chr5:74397852-74397871 MsG0580028089.01.T01:three_prime_UTR 40.0%
CAAAGTCTCATGTGCAAATG+TGG - Chr5:74394246-74394265 None:intergenic 40.0%
CACATTTGCACATGAGACTT+TGG + Chr5:74394244-74394263 MsG0580028089.01.T01:intron 40.0%
CAGTACCATCTTCTATTGAG+AGG - Chr5:74396529-74396548 None:intergenic 40.0%
CAGTTCTATTTCGAAAGGTC+AGG - Chr5:74396828-74396847 None:intergenic 40.0%
CAGTTGCATTCCTTTGCAAT+GGG - Chr5:74397489-74397508 None:intergenic 40.0%
CTGAACCCTCCTTATATATC+TGG - Chr5:74395949-74395968 None:intergenic 40.0%
GAACCTTCAAACGGATATTG+CGG - Chr5:74393436-74393455 None:intergenic 40.0%
GACCTTTCGAAATAGAACTG+TGG + Chr5:74396828-74396847 MsG0580028089.01.T01:CDS 40.0%
GAGTCATTGTCTGAAGGAAA+TGG + Chr5:74396988-74397007 MsG0580028089.01.T01:CDS 40.0%
GATCGCAATGAGATCTATAC+AGG + Chr5:74397624-74397643 MsG0580028089.01.T01:CDS 40.0%
GCTTACGGAAGTTAGCAAAA+CGG + Chr5:74396753-74396772 MsG0580028089.01.T01:CDS 40.0%
GGAAGAGGAAAATTATGGGT+GGG + Chr5:74394538-74394557 MsG0580028089.01.T01:intron 40.0%
GTACGGATCTCATAATAGCA+CGG - Chr5:74395273-74395292 None:intergenic 40.0%
GTTAAATAGCGGCTATCATG+TGG + Chr5:74395080-74395099 MsG0580028089.01.T01:intron 40.0%
TAATTCAAGGAAGCGAAAGC+AGG + Chr5:74397536-74397555 MsG0580028089.01.T01:CDS 40.0%
TATTCATCGGAATAGCAAGG+TGG + Chr5:74396571-74396590 MsG0580028089.01.T01:CDS 40.0%
TCTAACTGTGCTCCTTATTC+TGG - Chr5:74397565-74397584 None:intergenic 40.0%
TCTGATGAGTCATTGTCTGA+AGG + Chr5:74396982-74397001 MsG0580028089.01.T01:CDS 40.0%
TTGTTGAGCATGGAAAACGA+TGG - Chr5:74395829-74395848 None:intergenic 40.0%
! ACTAAACCCACGAACACTTT+TGG - Chr5:74393390-74393409 None:intergenic 40.0%
! ACTGTTGATAAACCCATCAC+CGG - Chr5:74393336-74393355 None:intergenic 40.0%
! AGTTTTCCTTTTCCGAAACG+AGG + Chr5:74394561-74394580 MsG0580028089.01.T01:intron 40.0%
! CCTCTGAAGGAAAGAAAAGA+GGG + Chr5:74394361-74394380 MsG0580028089.01.T01:intron 40.0%
! CCTCTTTTCTTTCCTTCAGA+GGG - Chr5:74394363-74394382 None:intergenic 40.0%
! GCTCAAAAGTACGTACCTAA+AGG - Chr5:74396735-74396754 None:intergenic 40.0%
! GGTACGTACTTTTGAGCTTA+CGG + Chr5:74396738-74396757 MsG0580028089.01.T01:intron 40.0%
! GTTTTCCTTTTCCGAAACGA+GGG + Chr5:74394562-74394581 MsG0580028089.01.T01:intron 40.0%
! TTTTCCTTTTCCGAAACGAG+GGG + Chr5:74394563-74394582 MsG0580028089.01.T01:intron 40.0%
!! AGAGGATTTTTAGAGGGACA+TGG - Chr5:74396511-74396530 None:intergenic 40.0%
!!! TACCACTGAAGCCTTGTTTT+CGG + Chr5:74395499-74395518 MsG0580028089.01.T01:intron 40.0%
AACCCTACAGCTCTCGAATT+TGG - Chr5:74394409-74394428 None:intergenic 45.0%
AAGCGGAAAATTATGGGTGC+GGG + Chr5:74394702-74394721 MsG0580028089.01.T01:intron 45.0%
ACAACGCTACCATGTAGTTG+TGG + Chr5:74396309-74396328 MsG0580028089.01.T01:intron 45.0%
ACACACACCAGATTGTGCAA+GGG - Chr5:74395459-74395478 None:intergenic 45.0%
ACACCCAGTGTTGTCAATCA+AGG - Chr5:74395234-74395253 None:intergenic 45.0%
AGCAATCAGAGTACGGGATT+AGG - Chr5:74394331-74394350 None:intergenic 45.0%
AGGACAGCACAAAATTGGAC+AGG - Chr5:74395900-74395919 None:intergenic 45.0%
AGGCTTCAGTGGTATTACCT+CGG - Chr5:74395493-74395512 None:intergenic 45.0%
AGGTACAGCAATCAGAGTAC+GGG - Chr5:74394337-74394356 None:intergenic 45.0%
AGTCCAAATTCGAGAGCTGT+AGG + Chr5:74394403-74394422 MsG0580028089.01.T01:intron 45.0%
ATACCGTGAATTGTGAACGG+TGG + Chr5:74393172-74393191 MsG0580028089.01.T01:five_prime_UTR 45.0%
ATCAGAGTACGGGATTAGGT+TGG - Chr5:74394327-74394346 None:intergenic 45.0%
ATCTATACAGGCAACAGGCA+TGG + Chr5:74397636-74397655 MsG0580028089.01.T01:CDS 45.0%
CAACTGGTGGCTGTAATTCA+AGG + Chr5:74397523-74397542 MsG0580028089.01.T01:CDS 45.0%
CACCTTGTATATGCTGCTAG+AGG - Chr5:74396182-74396201 None:intergenic 45.0%
CAGACATAAGTAGGGGGTAA+TGG - Chr5:74395311-74395330 None:intergenic 45.0%
CAGGTACAGCAATCAGAGTA+CGG - Chr5:74394338-74394357 None:intergenic 45.0%
CAGGTCTGTGTCAATGACAA+TGG + Chr5:74394132-74394151 MsG0580028089.01.T01:intron 45.0%
GAAAGCAGGACTCCAGAATA+AGG + Chr5:74397550-74397569 MsG0580028089.01.T01:CDS 45.0%
GAAATAGAACTGTGGCTGTG+TGG + Chr5:74396836-74396855 MsG0580028089.01.T01:CDS 45.0%
GAATATGAAACGCCGACACT+AGG + Chr5:74394804-74394823 MsG0580028089.01.T01:intron 45.0%
GATATGACAGCGCCATATGT+CGG - Chr5:74394929-74394948 None:intergenic 45.0%
GCAGTTGCATTCCTTTGCAA+TGG - Chr5:74397490-74397509 None:intergenic 45.0%
GGGAAGAGGAAAATTATGGG+TGG + Chr5:74394537-74394556 MsG0580028089.01.T01:intron 45.0%
GTCCAAATTCGAGAGCTGTA+GGG + Chr5:74394404-74394423 MsG0580028089.01.T01:intron 45.0%
GTGTTGTCAAATATCGGCCA+TGG - Chr5:74395016-74395035 None:intergenic 45.0%
GTTGGATAATGTTTGCGTCC+CGG + Chr5:74397986-74398005 MsG0580028089.01.T01:three_prime_UTR 45.0%
TCAAGTCCAAGACCTTGTTG+TGG + Chr5:74393269-74393288 MsG0580028089.01.T01:CDS 45.0%
TCAGAGTACGGGATTAGGTT+GGG - Chr5:74394326-74394345 None:intergenic 45.0%
TCCCTCTAGCAGCATATACA+AGG + Chr5:74396177-74396196 MsG0580028089.01.T01:intron 45.0%
TCGTTATGGAAGAGAGGAAG+AGG + Chr5:74394488-74394507 MsG0580028089.01.T01:intron 45.0%
TCTTCCCATCCGTAAGGAAA+CGG - Chr5:74394732-74394751 None:intergenic 45.0%
TGAGCATGGAAAACGATGGT+AGG - Chr5:74395825-74395844 None:intergenic 45.0%
TTCTTTCCTTCAGAGGGATC+AGG - Chr5:74394357-74394376 None:intergenic 45.0%
TTGCTGCAGAGACCAATGAA+AGG + Chr5:74395632-74395651 MsG0580028089.01.T01:intron 45.0%
TTGGTCTCTGCAGCAAACAA+TGG - Chr5:74395628-74395647 None:intergenic 45.0%
TTTCCCGTTTCCTTACGGAT+GGG + Chr5:74394725-74394744 MsG0580028089.01.T01:intron 45.0%
TTTCCTTACGGATGGGAAGA+GGG + Chr5:74394732-74394751 MsG0580028089.01.T01:intron 45.0%
! ACGATGGAAGAAGGACCTTT+TGG - Chr5:74395371-74395390 None:intergenic 45.0%
! CCCTCTGAAGGAAAGAAAAG+AGG + Chr5:74394360-74394379 MsG0580028089.01.T01:intron 45.0%
! CCCTCTTTTCTTTCCTTCAG+AGG - Chr5:74394364-74394383 None:intergenic 45.0%
! GTTTTTGCCCTTGCACAATC+TGG + Chr5:74395449-74395468 MsG0580028089.01.T01:CDS 45.0%
! TATCGGCCATGGCAGATTTT+TGG - Chr5:74395005-74395024 None:intergenic 45.0%
!! CTTTGAAATGCAGAAGCACC+AGG + Chr5:74395764-74395783 MsG0580028089.01.T01:CDS 45.0%
!! GTAATGGGCACAGTAAAGCA+AGG - Chr5:74395295-74395314 None:intergenic 45.0%
!! TCTGAGTCTTTGAAATGGCC+AGG + Chr5:74395996-74396015 MsG0580028089.01.T01:CDS 45.0%
!!! ATATTTGAATTTTTTTAATT+AGG + Chr5:74393610-74393629 MsG0580028089.01.T01:intron 5.0%
!!! TATTTGAATTTTTTTAATTA+GGG + Chr5:74393611-74393630 MsG0580028089.01.T01:intron 5.0%
AAGAAGAAGCAAGGTCGTGG+TGG + Chr5:74393308-74393327 MsG0580028089.01.T01:CDS 50.0%
AAGCCAAAGTTCCGACATGC+CGG + Chr5:74394903-74394922 MsG0580028089.01.T01:intron 50.0%
AAGCTCTCATAGCAGGTGAG+GGG - Chr5:74397771-74397790 None:intergenic 50.0%
ACCTGCTATGAGAGCTTCTG+GGG + Chr5:74397774-74397793 MsG0580028089.01.T01:three_prime_UTR 50.0%
ACGTCAGACACACCTAGTGT+CGG - Chr5:74394819-74394838 None:intergenic 50.0%
AGAAGCTCTCATAGCAGGTG+AGG - Chr5:74397773-74397792 None:intergenic 50.0%
AGAGCTGTAGGGTTTCAGCT+GGG + Chr5:74394415-74394434 MsG0580028089.01.T01:intron 50.0%
AGGTCTTCGTGTCAGTGACA+TGG + Chr5:74393879-74393898 MsG0580028089.01.T01:intron 50.0%
ATGATATGGCCAATTCGCGG+AGG - Chr5:74394978-74394997 None:intergenic 50.0%
CACACACACCAGATTGTGCA+AGG - Chr5:74395460-74395479 None:intergenic 50.0%
CACCACCACCTTCCATTTCA+CGG - Chr5:74393220-74393239 None:intergenic 50.0%
CACCTGCTATGAGAGCTTCT+GGG + Chr5:74397773-74397792 MsG0580028089.01.T01:three_prime_UTR 50.0%
CTTCCCATCCGTAAGGAAAC+GGG - Chr5:74394731-74394750 None:intergenic 50.0%
CTTTCGAGGATCACCTTCTG+TGG + Chr5:74396884-74396903 MsG0580028089.01.T01:CDS 50.0%
GAAGCTCTCATAGCAGGTGA+GGG - Chr5:74397772-74397791 None:intergenic 50.0%
GAGCACAGTTAGAGAAGCCT+TGG + Chr5:74397572-74397591 MsG0580028089.01.T01:CDS 50.0%
GAGCCACCGTTCACAATTCA+CGG - Chr5:74393178-74393197 None:intergenic 50.0%
GGCGCTGTCATATCCAAGTA+TGG + Chr5:74394935-74394954 MsG0580028089.01.T01:intron 50.0%
GGGCACAGTAAAGCAAGGTA+CGG - Chr5:74395290-74395309 None:intergenic 50.0%
GTGTGTGCAGCATTTAACCG+AGG + Chr5:74395473-74395492 MsG0580028089.01.T01:CDS 50.0%
GTTTCCCGTTTCCTTACGGA+TGG + Chr5:74394724-74394743 MsG0580028089.01.T01:intron 50.0%
GTTTCCTCTTCCCCTCGTTT+CGG - Chr5:74394657-74394676 None:intergenic 50.0%
GTTTCCTTACGGATGGGAAG+AGG + Chr5:74394731-74394750 MsG0580028089.01.T01:intron 50.0%
TCACCTGCTATGAGAGCTTC+TGG + Chr5:74397772-74397791 MsG0580028089.01.T01:three_prime_UTR 50.0%
TCTTCCCCTCGTTTCGGAAA+AGG - Chr5:74394570-74394589 None:intergenic 50.0%
TGACATACTCTGCCCAGGAT+AGG + Chr5:74396054-74396073 MsG0580028089.01.T01:CDS 50.0%
TGCAATCAGGATGCCACAGA+AGG - Chr5:74396900-74396919 None:intergenic 50.0%
TGCCGAAAACAAGGCTTCAG+TGG - Chr5:74395504-74395523 None:intergenic 50.0%
TTCAGCTGGGAGAGGGTAAT+AGG + Chr5:74394428-74394447 MsG0580028089.01.T01:intron 50.0%
TTTCCCTCTTCCCATCCGTA+AGG - Chr5:74394738-74394757 None:intergenic 50.0%
! CATATCCAAGTATGGTGCCG+TGG + Chr5:74394943-74394962 MsG0580028089.01.T01:intron 50.0%
! TTTTCCGAAACGAGGGGAAG+AGG + Chr5:74394569-74394588 MsG0580028089.01.T01:intron 50.0%
!! AGTACTGACATACTCTGCCC+AGG + Chr5:74396049-74396068 MsG0580028089.01.T01:CDS 50.0%
AAAATGGGGCAGCAGTGCAG+AGG - Chr5:74397033-74397052 None:intergenic 55.0%
AAATGGGGCAGCAGTGCAGA+GGG - Chr5:74397032-74397051 None:intergenic 55.0%
CCTGCTATGAGAGCTTCTGG+GGG + Chr5:74397775-74397794 MsG0580028089.01.T01:three_prime_UTR 55.0%
GAGAGCTGTAGGGTTTCAGC+TGG + Chr5:74394414-74394433 MsG0580028089.01.T01:intron 55.0%
GCGAAGAAGAAGCAAGGTCG+TGG + Chr5:74393305-74393324 MsG0580028089.01.T01:CDS 55.0%
GCGGGTTTCCCGTTTCCTTA+CGG + Chr5:74394720-74394739 MsG0580028089.01.T01:intron 55.0%
GCTGTACCTGATCCCTCTGA+AGG + Chr5:74394348-74394367 MsG0580028089.01.T01:intron 55.0%
GCTTCCTCTTCCCCTCGTTT+CGG - Chr5:74394576-74394595 None:intergenic 55.0%
GGAGTTGGCCGTGAAATGGA+AGG + Chr5:74393209-74393228 MsG0580028089.01.T01:exon 55.0%
GGTGACGACTGTTCAACTGG+TGG + Chr5:74397510-74397529 MsG0580028089.01.T01:CDS 55.0%
GTAGGGTTTCAGCTGGGAGA+GGG + Chr5:74394421-74394440 MsG0580028089.01.T01:intron 55.0%
GTGAACGGTGGCTCCTTCAT+CGG + Chr5:74393184-74393203 MsG0580028089.01.T01:five_prime_UTR 55.0%
GTTGGCCGTGAAATGGAAGG+TGG + Chr5:74393212-74393231 MsG0580028089.01.T01:exon 55.0%
TACAGGCAACAGGCATGGTC+TGG + Chr5:74397641-74397660 MsG0580028089.01.T01:CDS 55.0%
TATGGCCAATTCGCGGAGGA+TGG - Chr5:74394974-74394993 None:intergenic 55.0%
TGCGGTGACGACTGTTCAAC+TGG + Chr5:74397507-74397526 MsG0580028089.01.T01:CDS 55.0%
TGTAGGGTTTCAGCTGGGAG+AGG + Chr5:74394420-74394439 MsG0580028089.01.T01:intron 55.0%
! CGTGAAATGGAAGGTGGTGG+TGG + Chr5:74393218-74393237 MsG0580028089.01.T01:exon 55.0%
! GGCATGGTCTGGTTCATGTG+TGG + Chr5:74397652-74397671 MsG0580028089.01.T01:CDS 55.0%
! GTCCAAGACCTTGTTGTGGC+CGG + Chr5:74393273-74393292 MsG0580028089.01.T01:CDS 55.0%
! GTGGTGGCGAAGAAGAAGCA+AGG + Chr5:74393299-74393318 MsG0580028089.01.T01:CDS 55.0%
!! GAAATGGAAGGTGGTGGTGG+CGG + Chr5:74393221-74393240 MsG0580028089.01.T01:exon 55.0%
AACGGTGGCTCCTTCATCGG+AGG + Chr5:74393187-74393206 MsG0580028089.01.T01:five_prime_UTR 60.0%
ACGGTGGCTCCTTCATCGGA+GGG + Chr5:74393188-74393207 MsG0580028089.01.T01:five_prime_UTR 60.0%
AGGAGGGTTCAGCCAGATGC+TGG + Chr5:74395957-74395976 MsG0580028089.01.T01:CDS 60.0%
CCATATGTCGGCCGGCATGT+CGG - Chr5:74394917-74394936 None:intergenic 60.0%
CCCCCAGAAGCTCTCATAGC+AGG - Chr5:74397778-74397797 None:intergenic 60.0%
CTCATAGCAGGTGAGGGGTG+AGG - Chr5:74397766-74397785 None:intergenic 60.0%
GCTCCTTCATCGGAGGGAGT+TGG + Chr5:74393194-74393213 MsG0580028089.01.T01:five_prime_UTR 60.0%
GGAGGGAGTTGGCCGTGAAA+TGG + Chr5:74393205-74393224 MsG0580028089.01.T01:exon 60.0%
GGCCGTGAAATGGAAGGTGG+TGG + Chr5:74393215-74393234 MsG0580028089.01.T01:exon 60.0%
GTGGCTGTGTGGAACTTCCG+TGG + Chr5:74396847-74396866 MsG0580028089.01.T01:CDS 60.0%
TCTTCTTCGCCACCACACGC+CGG - Chr5:74393295-74393314 None:intergenic 60.0%
TGACAGCGCCATATGTCGGC+CGG - Chr5:74394925-74394944 None:intergenic 60.0%
! AAGCAAGGTCGTGGTGGTGC+CGG + Chr5:74393314-74393333 MsG0580028089.01.T01:CDS 60.0%
ACCACACGCCGGCCACAACA+AGG - Chr5:74393284-74393303 None:intergenic 65.0%
AGCAGGTGAGGGGTGAGGAC+AGG - Chr5:74397761-74397780 None:intergenic 65.0%
CAGCGCCACGGCACCATACT+TGG - Chr5:74394951-74394970 None:intergenic 65.0%
CCGACATGCCGGCCGACATA+TGG + Chr5:74394914-74394933 MsG0580028089.01.T01:intron 65.0%
CGCCGGCCACAACAAGGTCT+TGG - Chr5:74393278-74393297 None:intergenic 65.0%
CGCTGCCATCCTCCGCGAAT+TGG + Chr5:74394966-74394985 MsG0580028089.01.T01:intron 65.0%
CGGCCAACTCCCTCCGATGA+AGG - Chr5:74393200-74393219 None:intergenic 65.0%
CGGCCGGCATGTCGGAACTT+TGG - Chr5:74394909-74394928 None:intergenic 65.0%
TTGTTGTGGCCGGCGTGTGG+TGG + Chr5:74393283-74393302 MsG0580028089.01.T01:CDS 65.0%
! ACCTTGTTGTGGCCGGCGTG+TGG + Chr5:74393280-74393299 MsG0580028089.01.T01:CDS 65.0%
!! GTCGTGGTGGTGCCGGTGAT+GGG + Chr5:74393321-74393340 MsG0580028089.01.T01:CDS 65.0%
!! GAAGGTGGTGGTGGCGGCAG+TGG + Chr5:74393227-74393246 MsG0580028089.01.T01:CDS 70.0%
!! GGTCGTGGTGGTGCCGGTGA+TGG + Chr5:74393320-74393339 MsG0580028089.01.T01:CDS 70.0%
!! GTGGTGGCGGCAGTGGTGGT+GGG + Chr5:74393234-74393253 MsG0580028089.01.T01:CDS 70.0%
CGCGGAGGATGGCAGCGCCA+CGG - Chr5:74394963-74394982 None:intergenic 75.0%
!! GGTGGTGGCGGCAGTGGTGG+TGG + Chr5:74393233-74393252 MsG0580028089.01.T01:CDS 75.0%
!! GGTGGTGGTGGCGGCAGTGG+TGG + Chr5:74393230-74393249 MsG0580028089.01.T01:CDS 75.0%
!! GTGGCGGCAGTGGTGGTGGG+AGG + Chr5:74393237-74393256 MsG0580028089.01.T01:CDS 75.0%
Chromosome Type Strat End Strand Name
Chr5 gene 74392923 74398017 74392923 ID=MsG0580028089.01;Name=MsG0580028089.01
Chr5 mRNA 74392923 74398017 74392923 ID=MsG0580028089.01.T01;Parent=MsG0580028089.01;Name=MsG0580028089.01.T01;_AED=0.31;_eAED=0.31;_QI=301|0.83|1|1|1|1|7|334|461
Chr5 exon 74392923 74393451 74392923 ID=MsG0580028089.01.T01:exon:23709;Parent=MsG0580028089.01.T01
Chr5 exon 74395347 74395494 74395347 ID=MsG0580028089.01.T01:exon:23710;Parent=MsG0580028089.01.T01
Chr5 exon 74395641 74395791 74395641 ID=MsG0580028089.01.T01:exon:23711;Parent=MsG0580028089.01.T01
Chr5 exon 74395950 74396075 74395950 ID=MsG0580028089.01.T01:exon:23712;Parent=MsG0580028089.01.T01
Chr5 exon 74396469 74396661 74396469 ID=MsG0580028089.01.T01:exon:23713;Parent=MsG0580028089.01.T01
Chr5 exon 74396739 74397009 74396739 ID=MsG0580028089.01.T01:exon:23714;Parent=MsG0580028089.01.T01
Chr5 exon 74397415 74398017 74397415 ID=MsG0580028089.01.T01:exon:23715;Parent=MsG0580028089.01.T01
Chr5 five_prime_UTR 74392923 74393223 74392923 ID=MsG0580028089.01.T01:five_prime_utr;Parent=MsG0580028089.01.T01
Chr5 CDS 74393224 74393451 74393224 ID=MsG0580028089.01.T01:cds;Parent=MsG0580028089.01.T01
Chr5 CDS 74395347 74395494 74395347 ID=MsG0580028089.01.T01:cds;Parent=MsG0580028089.01.T01
Chr5 CDS 74395641 74395791 74395641 ID=MsG0580028089.01.T01:cds;Parent=MsG0580028089.01.T01
Chr5 CDS 74395950 74396075 74395950 ID=MsG0580028089.01.T01:cds;Parent=MsG0580028089.01.T01
Chr5 CDS 74396469 74396661 74396469 ID=MsG0580028089.01.T01:cds;Parent=MsG0580028089.01.T01
Chr5 CDS 74396739 74397009 74396739 ID=MsG0580028089.01.T01:cds;Parent=MsG0580028089.01.T01
Chr5 CDS 74397415 74397683 74397415 ID=MsG0580028089.01.T01:cds;Parent=MsG0580028089.01.T01
Chr5 three_prime_UTR 74397684 74398017 74397684 ID=MsG0580028089.01.T01:three_prime_utr;Parent=MsG0580028089.01.T01
Gene Sequence

>MsG0580028089.01.T01

ATGGAAGGTGGTGGTGGCGGCAGTGGTGGTGGGAGGAGAGTTAGTTCAAGTCCAAGACCTTGTTGTGGCCGGCGTGTGGTGGCGAAGAAGAAGCAAGGTCGTGGTGGTGCCGGTGATGGGTTTATCAACAGTGTTAGGAAGCTTCAAAGACGTGAAATTTCTACCAAAAGTGTTCGTGGGTTTAGTATCACTGATGCTCAAGAACGATTCCGCAATATCCGTTTGAAGGAAGAATATGATACATATGATCCAAAAGGTCCTTCTTCCATCGTATTGCCATTTTTGAGAAAAAGGTCTAAGATTATTGAAATTGTAGCGGCTCAAGACATTGTTTTTGCCCTTGCACAATCTGGTGTGTGTGCAGCATTTAACCGAGAGACCAATGAAAGGATATGCTTCTTGAATATAAGTCCTGATGAAGTTATAAGAAGCTTGTTTTATAATAAAAATAACGACTCACTTATCACAGTTTCTGTCTATGCTTCCGACAGTTACAGTTCTTTGAAATGCAGAAGCACCAGGATTGAATATATAAGGAGGGTTCAGCCAGATGCTGGATTTGCTCTTTTCGAATCTGAGTCTTTGAAATGGCCAGGTTTTGTAGAGTTTGATGATGTAAATGGGAAAGTACTGACATACTCTGCCCAGGATAGTCCGGGGATCATGTTGTTGATTTATACTAAAACAAGCAGCCATGTCCCTCTAAAAATCCTCTCAATAGAAGATGGTACTGTTTTGAAGTCATTCAACCATCTTATTCATCGGAATAGCAAGGTGGACTTTATTGAGCAGTTCAATGAAAAGCTTCTTGTCAAGCAAGAAAATGAGAACCTCCAAATCCTTGATGTACGTACTTTTGAGCTTACGGAAGTTAGCAAAACGGAATTTATGACGCCATCTGCATTTATTTTCCTGTATGAGAATCAATTGTTCCTGACCTTTCGAAATAGAACTGTGGCTGTGTGGAACTTCCGTGGAGAACTTGTAACTTCTTTCGAGGATCACCTTCTGTGGCATCCTGATTGCAACACAAACAACATATACATAACAAGTGACCAGGATCTCATCATATCATACTGCAAGGCTGATTCTGATGAGTCATTGTCTGAAGGAAATGCGGGATCCATCAATATCAGCAACATTTTAACTGGTAAGTGTCTTGCAAAGATAAGGGCAAGTAATAGCTTTCCCATTGCAAAGGAATGCAACTGCGGTGACGACTGTTCAACTGGTGGCTGTAATTCAAGGAAGCGAAAGCAGGACTCCAGAATAAGGAGCACAGTTAGAGAAGCCTTGGAAGACATTACTGCTCTTTTCTATGATGAAGATCGCAATGAGATCTATACAGGCAACAGGCATGGTCTGGTTCATGTGTGGTCTAACTGA
Protein sequence

>MsG0580028089.01.T01

MEGGGGGSGGGRRVSSSPRPCCGRRVVAKKKQGRGGAGDGFINSVRKLQRREISTKSVRGFSITDAQERFRNIRLKEEYDTYDPKGPSSIVLPFLRKRSKIIEIVAAQDIVFALAQSGVCAAFNRETNERICFLNISPDEVIRSLFYNKNNDSLITVSVYASDSYSSLKCRSTRIEYIRRVQPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSPGIMLLIYTKTSSHVPLKILSIEDGTVLKSFNHLIHRNSKVDFIEQFNEKLLVKQENENLQILDVRTFELTEVSKTEFMTPSAFIFLYENQLFLTFRNRTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDESLSEGNAGSINISNILTGKCLAKIRASNSFPIAKECNCGDDCSTGGCNSRKRKQDSRIRSTVREALEDITALFYDEDRNEIYTGNRHGLVHVWSN*