AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580028984.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028984.01.T01 MTR_5g079490 80.195 308 23 3 1 308 1 270 1.74e-168 480
MsG0580028984.01.T01 MTR_5g079490 64.593 209 50 6 300 507 172 357 1.86e-71 231
MsG0580028984.01.T01 MTR_4g007820 81.933 238 43 0 1 238 1 238 1.20e-135 395
MsG0580028984.01.T01 MTR_4g007820 64.024 164 44 3 344 507 172 320 3.14e-52 180
MsG0580028984.01.T01 MTR_5g079480 74.026 77 20 0 33 109 128 204 2.87e-32 125
MsG0580028984.01.T01 MTR_3g100120 33.333 159 102 2 27 181 16 174 3.58e-19 91.3
MsG0580028984.01.T01 MTR_3g100120 33.333 159 102 2 27 181 18 176 3.63e-19 91.3
MsG0580028984.01.T01 MTR_7g034095 47.778 90 8 2 406 495 29 79 1.34e-13 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028984.01.T01 AT1G09700 37.179 156 91 3 27 177 15 168 5.28e-22 96.3
MsG0580028984.01.T01 AT1G09700 37.179 156 91 3 27 177 15 168 9.22e-22 98.2
MsG0580028984.01.T01 AT3G26932 32.468 154 100 3 27 177 1 153 1.61e-13 72.4
MsG0580028984.01.T01 AT3G26932 32.468 154 100 3 27 177 1 153 1.61e-13 72.4
MsG0580028984.01.T01 AT5G41070 31.818 154 101 3 27 177 1 153 8.96e-13 70.5
MsG0580028984.01.T01 AT3G62800 31.677 161 95 4 27 182 4 154 2.32e-11 65.9
MsG0580028984.01.T01 AT3G62800 31.677 161 95 4 27 182 4 154 2.32e-11 65.9
MsG0580028984.01.T01 AT3G62800 31.677 161 95 4 27 182 4 154 2.76e-11 65.5

Find 139 sgRNAs with CRISPR-Local

Find 257 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTTGCTTCTTCAGCTATT+TGG 0.176404 5:+89923674 MsG0580028984.01.T01:CDS
TTTGAAGACTTTGCAGCTTC+AGG 0.259612 5:-89924355 None:intergenic
TCTAAAGTACATACAAAATA+TGG 0.263872 5:-89923327 None:intergenic
TGCCTCGTCTTTAACCTTCT+TGG 0.267275 5:-89922258 None:intergenic
AAAGAAAATGAAGTAATCTT+TGG 0.273990 5:-89921321 None:intergenic
CAGTTTGAATGTTGGATCTT+AGG 0.275233 5:+89925182 MsG0580028984.01.T01:three_prime_UTR
CGGTGGGCATCTTCAGCTAT+TGG 0.276845 5:+89924201 MsG0580028984.01.T01:CDS
TTCTTATGAAGGGGTAAATA+TGG 0.297502 5:+89921126 MsG0580028984.01.T01:five_prime_UTR
TTGGGAAATTCTGCACATTC+TGG 0.301596 5:+89924049 MsG0580028984.01.T01:CDS
TGTTGAGATGTGGAAATAAT+TGG 0.314418 5:-89924304 None:intergenic
GCGCAAATCGAGCAACTTCT+TGG 0.324442 5:-89922223 None:intergenic
TGGTGGGCATCTTCAGCTAC+TGG 0.327713 5:+89924069 MsG0580028984.01.T01:CDS
GGTGGGCATCTTCAGCTATT+GGG 0.341027 5:+89924202 MsG0580028984.01.T01:CDS
AATTCATGTGTTTGCATCTC+AGG 0.347673 5:-89924328 None:intergenic
GGGAGCTGTGGAGGAAGTTC+AGG 0.359801 5:-89921396 None:intergenic
CATGTAGGTTGCAAGGCCTT+TGG 0.384924 5:-89923608 None:intergenic
ACACTCACACCAGTATCAAT+AGG 0.399291 5:-89924406 None:intergenic
CAAGGTGGTTACTGATCCTA+TGG 0.399715 5:+89924234 MsG0580028984.01.T01:CDS
ATAGGAAATTCTTCACATTC+TGG 0.399766 5:+89923785 MsG0580028984.01.T01:CDS
TGTCCATGTAATTCTTATGA+AGG 0.408004 5:+89921115 MsG0580028984.01.T01:five_prime_UTR
TTGCAAGGCCTTTGGTTTGG+TGG 0.408134 5:-89923600 None:intergenic
TGGTGGGCATCTTCAGCTAC+TGG 0.426385 5:+89923937 MsG0580028984.01.T01:CDS
GCCGCTATTCTTTCAATCCT+CGG 0.443359 5:+89923420 MsG0580028984.01.T01:CDS
CGTCTTTAACCTTCTTGGTA+AGG 0.445343 5:-89922253 None:intergenic
ATGGGAAATTCTGCACATTC+TGG 0.446946 5:+89923917 MsG0580028984.01.T01:CDS
AATGCAGGTAACTCTAACTC+GGG 0.448015 5:+89923530 MsG0580028984.01.T01:intron
ATACTGGTGTGAGTGTAAAA+AGG 0.450001 5:+89924413 MsG0580028984.01.T01:CDS
GCTGCACTTCCTATTGATAC+TGG 0.450554 5:+89924397 MsG0580028984.01.T01:CDS
GTCCATGTAATTCTTATGAA+GGG 0.453552 5:+89921116 MsG0580028984.01.T01:five_prime_UTR
GTATGTACTTTAGATTTGAA+TGG 0.457252 5:+89923336 MsG0580028984.01.T01:CDS
AGATCAAGTGTGATGGTGGA+TGG 0.462566 5:+89922152 MsG0580028984.01.T01:CDS
AGTGCAGCACTTGGTTGCTC+AGG 0.469164 5:-89924382 None:intergenic
CAAATGGCATGTCCTGAGTC+TGG 0.470424 5:+89924280 MsG0580028984.01.T01:CDS
TTGATCTATACGCAGGTGCC+TGG 0.474848 5:-89922136 None:intergenic
GAAATAATTGGGCCAGACTC+AGG 0.485410 5:-89924292 None:intergenic
TAGTGTAATGGTCTCACCCT+TGG 0.485762 5:+89924030 MsG0580028984.01.T01:CDS
AGTGTAATGGTCTCACCCTT+GGG 0.488636 5:+89924031 MsG0580028984.01.T01:CDS
GGAAATTCTGCACATTCTGG+TGG 0.493189 5:+89924052 MsG0580028984.01.T01:CDS
GGCTAATAAGAAGGCACGGA+TGG 0.497945 5:+89924456 MsG0580028984.01.T01:CDS
AAGTGTGATGGTGGATGGGT+TGG 0.502372 5:+89922157 MsG0580028984.01.T01:CDS
AGAAGTTGCTCGATTTGCGC+TGG 0.504427 5:+89922226 MsG0580028984.01.T01:CDS
GGTGGGCATCTTCAGCTACT+GGG 0.505303 5:+89924070 MsG0580028984.01.T01:CDS
AGAATGTGAAGAATTTCCTA+TGG 0.505327 5:-89923783 None:intergenic
GTTGAGATGTGGAAATAATT+GGG 0.509721 5:-89924303 None:intergenic
CAATGCAGGTAACTCTAACT+CGG 0.510369 5:+89923529 MsG0580028984.01.T01:intron
AGGTTGCAAGGCCTTTGGTT+TGG 0.511975 5:-89923603 None:intergenic
AAAATACAAGGCTAATAAGA+AGG 0.521265 5:+89924447 MsG0580028984.01.T01:CDS
ATAATACCTTGCAACCTACT+CGG 0.523132 5:+89923873 MsG0580028984.01.T01:CDS
ATAATACCTTGCAACCTACT+CGG 0.523132 5:+89924005 MsG0580028984.01.T01:CDS
TAATATTAATGAGATTCAAA+TGG 0.528199 5:+89924264 MsG0580028984.01.T01:CDS
TAATACCTTGCAACCTACTC+GGG 0.529020 5:+89923874 MsG0580028984.01.T01:CDS
TAATACCTTGCAACCTACTC+GGG 0.529020 5:+89924006 MsG0580028984.01.T01:CDS
ATAATACCTTGCAACCTACC+AGG 0.531611 5:+89923741 MsG0580028984.01.T01:CDS
ACCCCTTCATAAGAATTACA+TGG 0.532124 5:-89921118 None:intergenic
ACCTACTCGGGATAGTGTAA+TGG 0.544554 5:+89924018 MsG0580028984.01.T01:CDS
ACATTGATTACTTACGAGCA+GGG 0.544877 5:-89921419 None:intergenic
ATGTGTAACAGTTTGAATGT+TGG 0.547288 5:+89925174 MsG0580028984.01.T01:three_prime_UTR
GGAAATTCTGCACATTCTGG+TGG 0.548316 5:+89923920 MsG0580028984.01.T01:CDS
GATCAAGTGTGATGGTGGAT+GGG 0.549198 5:+89922153 MsG0580028984.01.T01:CDS
GCGCAACGAGGGATCAATCC+AGG 0.555827 5:+89922118 MsG0580028984.01.T01:CDS
TAGTGTAATTGTCTCACCCA+TGG 0.561014 5:+89923898 MsG0580028984.01.T01:CDS
CAAGGACGTTGCTGATCCTG+TGG 0.569525 5:+89923976 MsG0580028984.01.T01:CDS
GCACTTTAACAACAATAAGC+AGG 0.571252 5:-89925266 None:intergenic
AGTGTAATTGTCTCACCCAT+AGG 0.572306 5:+89923767 MsG0580028984.01.T01:CDS
TCCATGTAATTCTTATGAAG+GGG 0.573053 5:+89921117 MsG0580028984.01.T01:five_prime_UTR
GGAAATTCTTCACATTCTGG+TGG 0.579670 5:+89923788 MsG0580028984.01.T01:CDS
CTTTGATTCCACCAAACCAA+AGG 0.580769 5:+89923592 MsG0580028984.01.T01:CDS
GCGTCGAAGGCTAAAATACA+AGG 0.584016 5:+89924435 MsG0580028984.01.T01:CDS
GCTGGAGTACCTTACCAAGA+AGG 0.584258 5:+89922244 MsG0580028984.01.T01:CDS
TACTCCACAGAATTATATGT+AGG 0.584614 5:-89923291 None:intergenic
ACTATCCCTGGTAGGTTGCA+AGG 0.585977 5:-89923747 None:intergenic
GGAACGTTCAGAATATTCCT+CGG 0.587201 5:-89923651 None:intergenic
AAGGTATTATCATTACCGAC+AGG 0.590457 5:-89923728 None:intergenic
TGAGACAATTACACTATCCC+TGG 0.591893 5:-89923759 None:intergenic
CATCTCAGGCTGTTGAGATG+TGG 0.592291 5:-89924314 None:intergenic
AGTGTAATTGTCTCACCCAT+GGG 0.592853 5:+89923899 MsG0580028984.01.T01:CDS
GAACGTTCAGAATATTCCTC+GGG 0.594158 5:-89923650 None:intergenic
AACATCAATTCACCACAACT+AGG 0.594970 5:-89925237 None:intergenic
CAAGGGTGTTGCTGATCCTG+TGG 0.596448 5:+89924108 MsG0580028984.01.T01:CDS
TTGAATGGTACAAGATACAC+TGG 0.597907 5:+89923351 MsG0580028984.01.T01:CDS
TCAATAGGAAGTGCAGCACT+TGG 0.599488 5:-89924391 None:intergenic
GAAATTCTGCACATTCTGGT+GGG 0.603831 5:+89924053 MsG0580028984.01.T01:CDS
TTAATATTATCATTACCCAT+AGG 0.605066 5:-89924250 None:intergenic
GAAATTCTTCACATTCTGGT+GGG 0.606374 5:+89923789 MsG0580028984.01.T01:CDS
CATTGATTACTTACGAGCAG+GGG 0.611174 5:-89921418 None:intergenic
ACTACCTACATATAATTCTG+TGG 0.612591 5:+89923287 MsG0580028984.01.T01:CDS
GGCATACTCTATTATGAGCG+AGG 0.614215 5:+89922277 MsG0580028984.01.T01:CDS
CAATAGCTGAAGATGCCCAC+CGG 0.615152 5:-89924200 None:intergenic
GAATGTGAAGAATTTCCTAT+GGG 0.617344 5:-89923782 None:intergenic
AGAATGTGCAGAATTTCCCA+TGG 0.621196 5:-89923915 None:intergenic
AACAGATGTTGCTGATCCTG+TGG 0.621557 5:+89923844 MsG0580028984.01.T01:CDS
AAAGTATTATCATTACCCAC+AGG 0.621658 5:-89924124 None:intergenic
AAGGATGTTGCTGATCCTGT+CGG 0.624281 5:+89923713 MsG0580028984.01.T01:CDS
AAATAGCTGAAGAAGCAAAG+AGG 0.624916 5:-89923672 None:intergenic
CAGTAACAACGTGCGAAGTG+TGG 0.630947 5:+89925051 MsG0580028984.01.T01:exon
ACAAGGCTAATAAGAAGGCA+CGG 0.633436 5:+89924452 MsG0580028984.01.T01:CDS
TTTGAATGATAGTTCTTGTG+TGG 0.634087 5:+89925026 MsG0580028984.01.T01:CDS
GAAACTGAAGCTCGATTCAG+CGG 0.635771 5:-89921372 None:intergenic
TAATTCTGTGGAGTACAAAG+AGG 0.636056 5:+89923299 MsG0580028984.01.T01:CDS
GAAATTCTGCACATTCTGGT+GGG 0.636104 5:+89923921 MsG0580028984.01.T01:CDS
AAGGTATTATCATTACCCAC+AGG 0.637336 5:-89923860 None:intergenic
AAGGTATTATCATTACCCAC+AGG 0.637336 5:-89923992 None:intergenic
ATGCAGGTAACTCTAACTCG+GGG 0.637849 5:+89923531 MsG0580028984.01.T01:intron
AGAATGTGCAGAATTTCCCA+AGG 0.639528 5:-89924047 None:intergenic
ACAAGTACACTATCGCATGT+AGG 0.639771 5:-89923623 None:intergenic
ACTATCGCATGTAGGTTGCA+AGG 0.640879 5:-89923615 None:intergenic
ACAATTACACTATCACGAGT+AGG 0.641569 5:-89924151 None:intergenic
TAACAACGTGCGAAGTGTGG+TGG 0.641968 5:+89925054 MsG0580028984.01.T01:exon
TAATACCTTGCAACCTACCA+GGG 0.643400 5:+89923742 MsG0580028984.01.T01:CDS
ATTGATTACTTACGAGCAGG+GGG 0.648318 5:-89921417 None:intergenic
ACAATTACACTATCCCTGGT+AGG 0.648702 5:-89923755 None:intergenic
AAGGGTGTTGCTGATCCTGT+GGG 0.652366 5:+89924109 MsG0580028984.01.T01:CDS
ACAATTACACTATCCCGAGT+AGG 0.653624 5:-89923887 None:intergenic
AAAATTCTGCACATTCCGGT+GGG 0.656659 5:+89924185 MsG0580028984.01.T01:CDS
ATCACACTTGATCTATACGC+AGG 0.663623 5:-89922143 None:intergenic
AAGGACGTTGCTGATCCTGT+GGG 0.664258 5:+89923977 MsG0580028984.01.T01:CDS
ACAGATGTTGCTGATCCTGT+GGG 0.664335 5:+89923845 MsG0580028984.01.T01:CDS
ACTATCCCGAGTAGGTTGCA+AGG 0.667462 5:-89923879 None:intergenic
ACTATCCCGAGTAGGTTGCA+AGG 0.667462 5:-89924011 None:intergenic
AAGGTGGTTACTGATCCTAT+GGG 0.674520 5:+89924235 MsG0580028984.01.T01:CDS
GAATGTGCAGAATTTCCCAT+GGG 0.674556 5:-89923914 None:intergenic
GCTATTGGGTGCTAAAGACA+AGG 0.674585 5:+89924216 MsG0580028984.01.T01:CDS
GCTACTCGATGATAAAGACA+AGG 0.681499 5:+89923820 MsG0580028984.01.T01:CDS
ACCGAGGATTGAAAGAATAG+CGG 0.684229 5:-89923421 None:intergenic
TGCGTATAGATCAAGTGTGA+TGG 0.685034 5:+89922145 MsG0580028984.01.T01:CDS
GCTATTTGGAGCTAAAGACA+AGG 0.686232 5:+89923688 MsG0580028984.01.T01:CDS
TAGTGTACTTGTCTTACCCG+AGG 0.688244 5:+89923634 MsG0580028984.01.T01:CDS
TGGAGCTAAAGACAAGGACA+AGG 0.691534 5:+89923694 MsG0580028984.01.T01:CDS
GGGTGATAAAGACAAGGACA+AGG 0.692821 5:+89924090 MsG0580028984.01.T01:CDS
GTATAGATCAAGTGTGATGG+TGG 0.694219 5:+89922148 MsG0580028984.01.T01:CDS
TACCAAGAAGGTTAAAGACG+AGG 0.699905 5:+89922256 MsG0580028984.01.T01:CDS
ACCATTACACTATCCCGAGT+AGG 0.700509 5:-89924019 None:intergenic
TGCAGGTAACTCTAACTCGG+GGG 0.707823 5:+89923532 MsG0580028984.01.T01:intron
GAATGTGCAGAATTTCCCAA+GGG 0.709984 5:-89924046 None:intergenic
ATTGGGTGCTAAAGACAAGG+TGG 0.722949 5:+89924219 MsG0580028984.01.T01:CDS
GCTACTGGGTGATAAAGACA+AGG 0.727065 5:+89924084 MsG0580028984.01.T01:CDS
GGTGATAAAGACAAGGACAA+GGG 0.728362 5:+89924091 MsG0580028984.01.T01:CDS
TGAAGCATACTCATTCAACA+CGG 0.733810 5:-89923250 None:intergenic
TTGATTACTTACGAGCAGGG+GGG 0.744891 5:-89921416 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATACTATTATTAGATTTAA+AGG + Chr5:89923474-89923493 MsG0580028984.01.T01:intron 10.0%
!! AAGAAATGTATGAAAAAAAT+GGG + Chr5:89921161-89921180 MsG0580028984.01.T01:five_prime_UTR 15.0%
!! TAAGAAATGTATGAAAAAAA+TGG + Chr5:89921160-89921179 MsG0580028984.01.T01:five_prime_UTR 15.0%
!! TAATATTAATGAGATTCAAA+TGG + Chr5:89924264-89924283 MsG0580028984.01.T01:CDS 15.0%
!! TGATTTAATGATAAATGATT+AGG + Chr5:89921698-89921717 MsG0580028984.01.T01:intron 15.0%
!! TGTTAATATTATGTATTGAA+GGG + Chr5:89924843-89924862 MsG0580028984.01.T01:intron 15.0%
!! AAAAAACTTAGTAATGTGTT+TGG + Chr5:89925144-89925163 MsG0580028984.01.T01:three_prime_UTR 20.0%
!! AAAGAAAATGAAGTAATCTT+TGG - Chr5:89921324-89921343 None:intergenic 20.0%
!! AATATGACAAGATGAAATAT+AGG - Chr5:89924503-89924522 None:intergenic 20.0%
!! AATCATCTATTAATCTGTTT+GGG + Chr5:89924736-89924755 MsG0580028984.01.T01:intron 20.0%
!! ATATAATCCATTAAAACAGA+AGG - Chr5:89922803-89922822 None:intergenic 20.0%
!! ATTTATTGTCTGTTTCAATT+TGG + Chr5:89923126-89923145 MsG0580028984.01.T01:intron 20.0%
!! CTATTATTAGATTTAAAGGT+AGG + Chr5:89923478-89923497 MsG0580028984.01.T01:intron 20.0%
!! GTGTTAATATTATGTATTGA+AGG + Chr5:89924842-89924861 MsG0580028984.01.T01:intron 20.0%
!! TAATCATCTATTAATCTGTT+TGG + Chr5:89924735-89924754 MsG0580028984.01.T01:intron 20.0%
!! TATCAAGAAAAAAACATTGT+TGG + Chr5:89922720-89922739 MsG0580028984.01.T01:intron 20.0%
!! TTAATATTATCATTACCCAT+AGG - Chr5:89924253-89924272 None:intergenic 20.0%
!! TTCATAAAAACAATACAAGA+AGG - Chr5:89921547-89921566 None:intergenic 20.0%
!! TTTCTGTTTGATATGAAATT+GGG + Chr5:89921480-89921499 MsG0580028984.01.T01:intron 20.0%
!!! AACACATTACTAAGTTTTTT+CGG - Chr5:89925144-89925163 None:intergenic 20.0%
!!! GAATATTTTTGTTGTTAAAG+TGG + Chr5:89921975-89921994 MsG0580028984.01.T01:intron 20.0%
!!! GAATGTTTTTGTAGTTATAA+TGG + Chr5:89921626-89921645 MsG0580028984.01.T01:intron 20.0%
!!! GATTATATTTGTTGTTATAG+TGG + Chr5:89921837-89921856 MsG0580028984.01.T01:intron 20.0%
!!! GTATTATAATTTTGCAGTAA+AGG - Chr5:89923459-89923478 None:intergenic 20.0%
!!! TAAGATATTGATAACAGTAA+TGG - Chr5:89923043-89923062 None:intergenic 20.0%
!!! TCTAAAGTACATACAAAATA+TGG - Chr5:89923330-89923349 None:intergenic 20.0%
!!! TTTTCTGTTTGATATGAAAT+TGG + Chr5:89921479-89921498 MsG0580028984.01.T01:intron 20.0%
! AAAATACAAGGCTAATAAGA+AGG + Chr5:89924447-89924466 MsG0580028984.01.T01:CDS 25.0%
! ACAAAGCAATAAGATTCATA+TGG - Chr5:89924647-89924666 None:intergenic 25.0%
! ATATCCAACAAAAACATAAC+AGG - Chr5:89922849-89922868 None:intergenic 25.0%
! ATATTCTAGTGGTTGTATAA+TGG + Chr5:89924879-89924898 MsG0580028984.01.T01:intron 25.0%
! ATGTAATGGTCTAATGAAAA+TGG + Chr5:89922004-89922023 MsG0580028984.01.T01:intron 25.0%
! CAAATTAAAGACTCATCAAA+AGG - Chr5:89922905-89922924 None:intergenic 25.0%
! CCTTATGATTAATTGATGTT+CGG + Chr5:89924978-89924997 MsG0580028984.01.T01:intron 25.0%
! CGTTAATTATCAATTTCAGT+AGG + Chr5:89922316-89922335 MsG0580028984.01.T01:intron 25.0%
! GAAGTATATAGAGTAATACT+TGG - Chr5:89924701-89924720 None:intergenic 25.0%
! GGTAAAATGGTTTAGTTATA+GGG + Chr5:89921869-89921888 MsG0580028984.01.T01:intron 25.0%
! GTATGTACTTTAGATTTGAA+TGG + Chr5:89923336-89923355 MsG0580028984.01.T01:CDS 25.0%
! TAAAGTGGTATCTAATGTAA+TGG + Chr5:89921990-89922009 MsG0580028984.01.T01:intron 25.0%
! TATTCTAGTGGTTGTATAAT+GGG + Chr5:89924880-89924899 MsG0580028984.01.T01:intron 25.0%
! TCTTGTATGCTTTATATTTC+AGG + Chr5:89923209-89923228 MsG0580028984.01.T01:intron 25.0%
! TGGTAAAATGGTTTAGTTAT+AGG + Chr5:89921868-89921887 MsG0580028984.01.T01:intron 25.0%
! TTGTTATAGTGGTATTAGTA+TGG + Chr5:89921848-89921867 MsG0580028984.01.T01:intron 25.0%
! TTTCATCTTGTCATATTATC+CGG + Chr5:89924506-89924525 MsG0580028984.01.T01:intron 25.0%
!! GAAGTAATCTTTGGATTTTA+GGG - Chr5:89921315-89921334 None:intergenic 25.0%
!! GAATAATTTTGTTGCTATAG+TGG + Chr5:89921800-89921819 MsG0580028984.01.T01:intron 25.0%
!! GTAAGTAATCAATGTTTTCT+GGG + Chr5:89921427-89921446 MsG0580028984.01.T01:intron 25.0%
!! TGAAGTAATCTTTGGATTTT+AGG - Chr5:89921316-89921335 None:intergenic 25.0%
!! TTCATTTTCTTTCTCATCAA+TGG + Chr5:89921332-89921351 MsG0580028984.01.T01:exon 25.0%
!! TTGCGTTAATATGATTTTCT+GGG - Chr5:89921224-89921243 None:intergenic 25.0%
!! TTTGCGTTAATATGATTTTC+TGG - Chr5:89921225-89921244 None:intergenic 25.0%
!!! GGTTTTGTTATAGGTTTTAA+TGG + Chr5:89921666-89921685 MsG0580028984.01.T01:intron 25.0%
!!! TTAATATGATTTTCTGGGAA+TGG - Chr5:89921219-89921238 None:intergenic 25.0%
AATGTGAACTTCAAGCATTA+TGG - Chr5:89924622-89924641 None:intergenic 30.0%
ACTAATCAAATATCCAATGC+AGG + Chr5:89923515-89923534 MsG0580028984.01.T01:intron 30.0%
ACTACCTACATATAATTCTG+TGG + Chr5:89923287-89923306 MsG0580028984.01.T01:CDS 30.0%
AGAATGTGAAGAATTTCCTA+TGG - Chr5:89923786-89923805 None:intergenic 30.0%
ATAGGAAATTCTTCACATTC+TGG + Chr5:89923785-89923804 MsG0580028984.01.T01:CDS 30.0%
ATGAAAAATTCTGCACATTC+CGG + Chr5:89924181-89924200 MsG0580028984.01.T01:CDS 30.0%
ATGCTTTCGTAAATAAGTGA+TGG + Chr5:89923062-89923081 MsG0580028984.01.T01:intron 30.0%
ATGTGTAACAGTTTGAATGT+TGG + Chr5:89925174-89925193 MsG0580028984.01.T01:three_prime_UTR 30.0%
CATTAGAGTAACTTGAGTAT+TGG + Chr5:89924776-89924795 MsG0580028984.01.T01:intron 30.0%
CCGAACATCAATTAATCATA+AGG - Chr5:89924981-89925000 None:intergenic 30.0%
GAATGTGAAGAATTTCCTAT+GGG - Chr5:89923785-89923804 None:intergenic 30.0%
GGATGATAAAGAGAAAAACA+AGG + Chr5:89923958-89923977 MsG0580028984.01.T01:CDS 30.0%
GTATGAAAAAAATGGGCATT+GGG + Chr5:89921168-89921187 MsG0580028984.01.T01:five_prime_UTR 30.0%
GTCCATGTAATTCTTATGAA+GGG + Chr5:89921116-89921135 MsG0580028984.01.T01:five_prime_UTR 30.0%
GTGGTATTAGTATGGTAAAA+TGG + Chr5:89921856-89921875 MsG0580028984.01.T01:intron 30.0%
GTTGAGATGTGGAAATAATT+GGG - Chr5:89924306-89924325 None:intergenic 30.0%
TACTCCACAGAATTATATGT+AGG - Chr5:89923294-89923313 None:intergenic 30.0%
TAGAAGAAAAAAAGATGCAG+TGG + Chr5:89923383-89923402 MsG0580028984.01.T01:CDS 30.0%
TCCATGTAATTCTTATGAAG+GGG + Chr5:89921117-89921136 MsG0580028984.01.T01:five_prime_UTR 30.0%
TGTATGAAAAAAATGGGCAT+TGG + Chr5:89921167-89921186 MsG0580028984.01.T01:five_prime_UTR 30.0%
TGTCCATGTAATTCTTATGA+AGG + Chr5:89921115-89921134 MsG0580028984.01.T01:five_prime_UTR 30.0%
TGTTGAGATGTGGAAATAAT+TGG - Chr5:89924307-89924326 None:intergenic 30.0%
TTCTTATGAAGGGGTAAATA+TGG + Chr5:89921126-89921145 MsG0580028984.01.T01:five_prime_UTR 30.0%
TTTGAATGATAGTTCTTGTG+TGG + Chr5:89925026-89925045 MsG0580028984.01.T01:CDS 30.0%
TTTGTCAAATAGCAGCTATA+TGG - Chr5:89922427-89922446 None:intergenic 30.0%
! AAAGTATTATCATTACCCAC+AGG - Chr5:89924127-89924146 None:intergenic 30.0%
! ATGGTATTAGTTTGATGAAG+TGG + Chr5:89921645-89921664 MsG0580028984.01.T01:intron 30.0%
! CGTAAGTAATCAATGTTTTC+TGG + Chr5:89921426-89921445 MsG0580028984.01.T01:intron 30.0%
! GAATGTGCAGAATTTTTCAT+GGG - Chr5:89924181-89924200 None:intergenic 30.0%
! GACTTTTCAAAGTTTACATG+TGG + Chr5:89922569-89922588 MsG0580028984.01.T01:intron 30.0%
! GCAGATTGCGATAAATATTT+TGG + Chr5:89922373-89922392 MsG0580028984.01.T01:intron 30.0%
! GGTTTAGTTATAGGGTTTTA+TGG + Chr5:89921877-89921896 MsG0580028984.01.T01:intron 30.0%
! TTTTGCTTGTACAACTGAAA+CGG + Chr5:89921270-89921289 MsG0580028984.01.T01:five_prime_UTR 30.0%
!! TCTTTAATTTGCTGGAATGA+AGG + Chr5:89922914-89922933 MsG0580028984.01.T01:intron 30.0%
!! TTGATGAGTCTTTAATTTGC+TGG + Chr5:89922906-89922925 MsG0580028984.01.T01:intron 30.0%
!! TTTGCCTGTTATGTTTTTGT+TGG + Chr5:89922842-89922861 MsG0580028984.01.T01:intron 30.0%
!!! AATAGTTTTGTTCTGTTTGC+AGG - Chr5:89924567-89924586 None:intergenic 30.0%
!!! TGATGAAGTGGTTTTGTTAT+AGG + Chr5:89921657-89921676 MsG0580028984.01.T01:intron 30.0%
!!! TTTCAAGTTTTTCCTAGTTG+TGG + Chr5:89925225-89925244 MsG0580028984.01.T01:three_prime_UTR 30.0%
AAATAGCTGAAGAAGCAAAG+AGG - Chr5:89923675-89923694 None:intergenic 35.0%
AACATCAATTCACCACAACT+AGG - Chr5:89925240-89925259 None:intergenic 35.0%
AAGAAAACCTGCATCTAAAG+AGG - Chr5:89922673-89922692 None:intergenic 35.0%
AATCATACAGTGCTGTCAAA+TGG - Chr5:89922527-89922546 None:intergenic 35.0%
AATTCATGTGTTTGCATCTC+AGG - Chr5:89924331-89924350 None:intergenic 35.0%
ACAACCACTAGAATATGTGT+TGG - Chr5:89924875-89924894 None:intergenic 35.0%
ACAATTACACTATCACGAGT+AGG - Chr5:89924154-89924173 None:intergenic 35.0%
ACCCCTTCATAAGAATTACA+TGG - Chr5:89921121-89921140 None:intergenic 35.0%
AGAAAACCTGCATCTAAAGA+GGG - Chr5:89922672-89922691 None:intergenic 35.0%
AGCTGCTATATTTGTTTGTG+TGG + Chr5:89924921-89924940 MsG0580028984.01.T01:intron 35.0%
ATAATACCTTGCAACCTACT+CGG + Chr5:89923873-89923892 MsG0580028984.01.T01:CDS 35.0%
ATACTGGTGTGAGTGTAAAA+AGG + Chr5:89924413-89924432 MsG0580028984.01.T01:CDS 35.0%
ATGTCCAACACATATTCTAG+TGG + Chr5:89924868-89924887 MsG0580028984.01.T01:intron 35.0%
CAGTTTGAATGTTGGATCTT+AGG + Chr5:89925182-89925201 MsG0580028984.01.T01:three_prime_UTR 35.0%
GAAATAACACTTCTGAGTGA+TGG + Chr5:89923093-89923112 MsG0580028984.01.T01:intron 35.0%
GAAATTCTTCACATTCTGGT+GGG + Chr5:89923789-89923808 MsG0580028984.01.T01:CDS 35.0%
GCACTTTAACAACAATAAGC+AGG - Chr5:89925269-89925288 None:intergenic 35.0%
GGAAAGTTACAAAATCACAG+AGG - Chr5:89924546-89924565 None:intergenic 35.0%
TAATTCTGTGGAGTACAAAG+AGG + Chr5:89923299-89923318 MsG0580028984.01.T01:CDS 35.0%
TATATGGCACTATAGCATAG+TGG - Chr5:89922411-89922430 None:intergenic 35.0%
TCTTTGCTTCTTCAGCTATT+TGG + Chr5:89923674-89923693 MsG0580028984.01.T01:CDS 35.0%
TGAAGCATACTCATTCAACA+CGG - Chr5:89923253-89923272 None:intergenic 35.0%
TTACTCTAATGAAGCATGCA+TGG - Chr5:89924767-89924786 None:intergenic 35.0%
TTGAATGGTACAAGATACAC+TGG + Chr5:89923351-89923370 MsG0580028984.01.T01:CDS 35.0%
TTGTCTGTTTCAATTTGGCA+TGG + Chr5:89923131-89923150 MsG0580028984.01.T01:intron 35.0%
! AACATTGATTACTTACGAGC+AGG - Chr5:89921423-89921442 None:intergenic 35.0%
! AAGGTATTATCATTACCCAC+AGG - Chr5:89923863-89923882 None:intergenic 35.0%
! AAGGTATTATCATTACCGAC+AGG - Chr5:89923731-89923750 None:intergenic 35.0%
! ACATTGATTACTTACGAGCA+GGG - Chr5:89921422-89921441 None:intergenic 35.0%
! ATTGGGTCTGTTACAGTTTT+TGG + Chr5:89921497-89921516 MsG0580028984.01.T01:intron 35.0%
! GATAACAGTAATGGAAACTC+TGG - Chr5:89923034-89923053 None:intergenic 35.0%
! GCATTATATTTTGTTGCCCA+TGG + Chr5:89923006-89923025 MsG0580028984.01.T01:intron 35.0%
! GGAATGTGCAGAATTTTTCA+TGG - Chr5:89924182-89924201 None:intergenic 35.0%
! TTTTATCCCTCTTTAGATGC+AGG + Chr5:89922663-89922682 MsG0580028984.01.T01:intron 35.0%
!! AAAAAAATGGGCATTGGGAA+AGG + Chr5:89921173-89921192 MsG0580028984.01.T01:five_prime_UTR 35.0%
!!! TAATCTTGGTTTTTTGCCTG+TGG + Chr5:89924948-89924967 MsG0580028984.01.T01:intron 35.0%
AAAAATTCTGCACATTCCGG+TGG + Chr5:89924184-89924203 MsG0580028984.01.T01:CDS 40.0%
AAAATTCTGCACATTCCGGT+GGG + Chr5:89924185-89924204 MsG0580028984.01.T01:CDS 40.0%
AAGGTGGTTACTGATCCTAT+GGG + Chr5:89924235-89924254 MsG0580028984.01.T01:CDS 40.0%
AATGCAGGTAACTCTAACTC+GGG + Chr5:89923530-89923549 MsG0580028984.01.T01:intron 40.0%
AATGGAAACTCTGGTACCAT+GGG - Chr5:89923025-89923044 None:intergenic 40.0%
ACAAGGCTAATAAGAAGGCA+CGG + Chr5:89924452-89924471 MsG0580028984.01.T01:CDS 40.0%
ACAAGTACACTATCGCATGT+AGG - Chr5:89923626-89923645 None:intergenic 40.0%
ACAATTACACTATCCCGAGT+AGG - Chr5:89923890-89923909 None:intergenic 40.0%
ACAATTACACTATCCCTGGT+AGG - Chr5:89923758-89923777 None:intergenic 40.0%
ACACTCACACCAGTATCAAT+AGG - Chr5:89924409-89924428 None:intergenic 40.0%
ACCGAGGATTGAAAGAATAG+CGG - Chr5:89923424-89923443 None:intergenic 40.0%
AGAATGTGCAGAATTTCCCA+AGG - Chr5:89923918-89923937 None:intergenic 40.0%
AGAATGTGCAGAATTTCCCA+TGG - Chr5:89923918-89923937 None:intergenic 40.0%
AGAGGAAGCAAAAGAAACAC+CGG - Chr5:89924528-89924547 None:intergenic 40.0%
AGCGTATCACAGAACAATAG+TGG + Chr5:89922461-89922480 MsG0580028984.01.T01:intron 40.0%
AGTGTAATTGTCTCACCCAT+AGG + Chr5:89923767-89923786 MsG0580028984.01.T01:CDS 40.0%
AGTGTAATTGTCTCACCCAT+GGG + Chr5:89923767-89923786 MsG0580028984.01.T01:CDS 40.0%
ATAATACCTTGCAACCTACC+AGG + Chr5:89923741-89923760 MsG0580028984.01.T01:CDS 40.0%
ATCACACTTGATCTATACGC+AGG - Chr5:89922146-89922165 None:intergenic 40.0%
ATGGGAAATTCTGCACATTC+TGG + Chr5:89923917-89923936 MsG0580028984.01.T01:CDS 40.0%
ATTGATTACTTACGAGCAGG+GGG - Chr5:89921420-89921439 None:intergenic 40.0%
CAAGCATTATGGACAGACAT+GGG - Chr5:89924611-89924630 None:intergenic 40.0%
CAATGCAGGTAACTCTAACT+CGG + Chr5:89923529-89923548 MsG0580028984.01.T01:intron 40.0%
CGTCTTTAACCTTCTTGGTA+AGG - Chr5:89922256-89922275 None:intergenic 40.0%
CTTTGATTCCACCAAACCAA+AGG + Chr5:89923592-89923611 MsG0580028984.01.T01:CDS 40.0%
GAAATTCTGCACATTCTGGT+GGG + Chr5:89923921-89923940 MsG0580028984.01.T01:CDS 40.0%
GAACGTTCAGAATATTCCTC+GGG - Chr5:89923653-89923672 None:intergenic 40.0%
GAATGTGCAGAATTTCCCAA+GGG - Chr5:89924049-89924068 None:intergenic 40.0%
GAATGTGCAGAATTTCCCAT+GGG - Chr5:89923917-89923936 None:intergenic 40.0%
GCTACTCGATGATAAAGACA+AGG + Chr5:89923820-89923839 MsG0580028984.01.T01:CDS 40.0%
GGAAATTCTTCACATTCTGG+TGG + Chr5:89923788-89923807 MsG0580028984.01.T01:CDS 40.0%
GGAACGTTCAGAATATTCCT+CGG - Chr5:89923654-89923673 None:intergenic 40.0%
GGTGATAAAGACAAGGACAA+GGG + Chr5:89924091-89924110 MsG0580028984.01.T01:CDS 40.0%
GTAGTTATTGTTTGCCAGGA+CGG + Chr5:89922776-89922795 MsG0580028984.01.T01:intron 40.0%
GTATAGATCAAGTGTGATGG+TGG + Chr5:89922148-89922167 MsG0580028984.01.T01:CDS 40.0%
GTCCTGGCAAACAATAACTA+CGG - Chr5:89922777-89922796 None:intergenic 40.0%
GTTCGGTTGTGAAAATTTGC+AGG + Chr5:89924995-89925014 MsG0580028984.01.T01:intron 40.0%
GTTTGTGTGGATGCTAATCT+TGG + Chr5:89924934-89924953 MsG0580028984.01.T01:intron 40.0%
TAATACCTTGCAACCTACCA+GGG + Chr5:89923742-89923761 MsG0580028984.01.T01:CDS 40.0%
TAATACCTTGCAACCTACTC+GGG + Chr5:89923874-89923893 MsG0580028984.01.T01:CDS 40.0%
TAATGGAAACTCTGGTACCA+TGG - Chr5:89923026-89923045 None:intergenic 40.0%
TACCAAGAAGGTTAAAGACG+AGG + Chr5:89922256-89922275 MsG0580028984.01.T01:CDS 40.0%
TAGTGTAATTGTCTCACCCA+TGG + Chr5:89923766-89923785 MsG0580028984.01.T01:CDS 40.0%
TATAGCGGCACTATAGCATA+GGG - Chr5:89922500-89922519 None:intergenic 40.0%
TCAAGCATTATGGACAGACA+TGG - Chr5:89924612-89924631 None:intergenic 40.0%
TGAGACAATTACACTATCCC+TGG - Chr5:89923762-89923781 None:intergenic 40.0%
TGCGTATAGATCAAGTGTGA+TGG + Chr5:89922145-89922164 MsG0580028984.01.T01:CDS 40.0%
TTAATGTTGTCACAAGAGCG+AGG - Chr5:89922875-89922894 None:intergenic 40.0%
TTATAGCGGCACTATAGCAT+AGG - Chr5:89922501-89922520 None:intergenic 40.0%
TTGGGAAATTCTGCACATTC+TGG + Chr5:89924049-89924068 MsG0580028984.01.T01:CDS 40.0%
TTTGAAGACTTTGCAGCTTC+AGG - Chr5:89924358-89924377 None:intergenic 40.0%
TTTGCAGTAAAGGAGTCGAA+AGG - Chr5:89923449-89923468 None:intergenic 40.0%
! CATTGATTACTTACGAGCAG+GGG - Chr5:89921421-89921440 None:intergenic 40.0%
! GCTATTTGGAGCTAAAGACA+AGG + Chr5:89923688-89923707 MsG0580028984.01.T01:CDS 40.0%
!! GAATGTCTTTGCTGTTGTAG+AGG + Chr5:89921937-89921956 MsG0580028984.01.T01:intron 40.0%
AACAGATGTTGCTGATCCTG+TGG + Chr5:89923844-89923863 MsG0580028984.01.T01:CDS 45.0%
AAGGATGTTGCTGATCCTGT+CGG + Chr5:89923713-89923732 MsG0580028984.01.T01:CDS 45.0%
ACAGATGTTGCTGATCCTGT+GGG + Chr5:89923845-89923864 MsG0580028984.01.T01:CDS 45.0%
ACCATTACACTATCCCGAGT+AGG - Chr5:89924022-89924041 None:intergenic 45.0%
ACCTACTCGGGATAGTGTAA+TGG + Chr5:89923886-89923905 MsG0580028984.01.T01:CDS 45.0%
ACTATCGCATGTAGGTTGCA+AGG - Chr5:89923618-89923637 None:intergenic 45.0%
AGCCGTAGTTATTGTTTGCC+AGG + Chr5:89922772-89922791 MsG0580028984.01.T01:intron 45.0%
AGTGTAATGGTCTCACCCTT+GGG + Chr5:89924031-89924050 MsG0580028984.01.T01:CDS 45.0%
ATAGCGGCACTATAGCATAG+GGG - Chr5:89922499-89922518 None:intergenic 45.0%
ATGCAGGTAACTCTAACTCG+GGG + Chr5:89923531-89923550 MsG0580028984.01.T01:intron 45.0%
ATTGGGTGCTAAAGACAAGG+TGG + Chr5:89924219-89924238 MsG0580028984.01.T01:CDS 45.0%
CAAGGTGGTTACTGATCCTA+TGG + Chr5:89924234-89924253 MsG0580028984.01.T01:CDS 45.0%
CGAGTTAGAGTTACCTGCAT+TGG - Chr5:89923531-89923550 None:intergenic 45.0%
CGTAAATAAGTGATGGCTGC+TGG + Chr5:89923069-89923088 MsG0580028984.01.T01:intron 45.0%
CTGTCAAATGGCGCTTATAG+CGG - Chr5:89922515-89922534 None:intergenic 45.0%
GAAACTGAAGCTCGATTCAG+CGG - Chr5:89921375-89921394 None:intergenic 45.0%
GAAATAATTGGGCCAGACTC+AGG - Chr5:89924295-89924314 None:intergenic 45.0%
GCCGCTATTCTTTCAATCCT+CGG + Chr5:89923420-89923439 MsG0580028984.01.T01:CDS 45.0%
GCGTCGAAGGCTAAAATACA+AGG + Chr5:89924435-89924454 MsG0580028984.01.T01:CDS 45.0%
GCTACTGGGTGATAAAGACA+AGG + Chr5:89924084-89924103 MsG0580028984.01.T01:CDS 45.0%
GCTATTGGGTGCTAAAGACA+AGG + Chr5:89924216-89924235 MsG0580028984.01.T01:CDS 45.0%
GCTGCACTTCCTATTGATAC+TGG + Chr5:89924397-89924416 MsG0580028984.01.T01:CDS 45.0%
GGAAATTCTGCACATTCTGG+TGG + Chr5:89923920-89923939 MsG0580028984.01.T01:CDS 45.0%
GGCATACTCTATTATGAGCG+AGG + Chr5:89922277-89922296 MsG0580028984.01.T01:CDS 45.0%
GGGTGATAAAGACAAGGACA+AGG + Chr5:89924090-89924109 MsG0580028984.01.T01:CDS 45.0%
TAGTGTAATGGTCTCACCCT+TGG + Chr5:89924030-89924049 MsG0580028984.01.T01:CDS 45.0%
TAGTGTACTTGTCTTACCCG+AGG + Chr5:89923634-89923653 MsG0580028984.01.T01:CDS 45.0%
TCGTTGCGCGAAAAAAACTC+AGG - Chr5:89922107-89922126 None:intergenic 45.0%
TGCCTCGTCTTTAACCTTCT+TGG - Chr5:89922261-89922280 None:intergenic 45.0%
TGGAGCTAAAGACAAGGACA+AGG + Chr5:89923694-89923713 MsG0580028984.01.T01:CDS 45.0%
TTAAAACAGAAGGTCCGTCC+TGG - Chr5:89922793-89922812 None:intergenic 45.0%
TTGATTACTTACGAGCAGGG+GGG - Chr5:89921419-89921438 None:intergenic 45.0%
! TCAATAGGAAGTGCAGCACT+TGG - Chr5:89924394-89924413 None:intergenic 45.0%
!! AGATCAAGTGTGATGGTGGA+TGG + Chr5:89922152-89922171 MsG0580028984.01.T01:CDS 45.0%
!! GATCAAGTGTGATGGTGGAT+GGG + Chr5:89922153-89922172 MsG0580028984.01.T01:CDS 45.0%
!! GGACGGACCTTCTGTTTTAA+TGG + Chr5:89922793-89922812 MsG0580028984.01.T01:intron 45.0%
!! TGAGTGTAAAAAGGCGTCGA+AGG + Chr5:89924422-89924441 MsG0580028984.01.T01:CDS 45.0%
!!! GAGTTTTTTTCGCGCAACGA+GGG + Chr5:89922107-89922126 MsG0580028984.01.T01:CDS 45.0%
!!! TGAGTTTTTTTCGCGCAACG+AGG + Chr5:89922106-89922125 MsG0580028984.01.T01:CDS 45.0%
AAGGACGTTGCTGATCCTGT+GGG + Chr5:89923977-89923996 MsG0580028984.01.T01:CDS 50.0%
AAGGAGTCGAAAGGATACCG+AGG - Chr5:89923440-89923459 None:intergenic 50.0%
ACTATCCCGAGTAGGTTGCA+AGG - Chr5:89923882-89923901 None:intergenic 50.0%
ACTATCCCTGGTAGGTTGCA+AGG - Chr5:89923750-89923769 None:intergenic 50.0%
AGGTTGCAAGGCCTTTGGTT+TGG - Chr5:89923606-89923625 None:intergenic 50.0%
ATCATAAGGCACGCATCCAC+AGG - Chr5:89924967-89924986 None:intergenic 50.0%
CAAATGGCATGTCCTGAGTC+TGG + Chr5:89924280-89924299 MsG0580028984.01.T01:CDS 50.0%
CAATAGCTGAAGATGCCCAC+CGG - Chr5:89924203-89924222 None:intergenic 50.0%
CAGTAACAACGTGCGAAGTG+TGG + Chr5:89925051-89925070 MsG0580028984.01.T01:exon 50.0%
CATCTCAGGCTGTTGAGATG+TGG - Chr5:89924317-89924336 None:intergenic 50.0%
CATGTAGGTTGCAAGGCCTT+TGG - Chr5:89923611-89923630 None:intergenic 50.0%
GCGCAAATCGAGCAACTTCT+TGG - Chr5:89922226-89922245 None:intergenic 50.0%
GGTGGGCATCTTCAGCTATT+GGG + Chr5:89924202-89924221 MsG0580028984.01.T01:CDS 50.0%
GTGCACAGAAGCTTGTGTCT+GGG + Chr5:89924798-89924817 MsG0580028984.01.T01:intron 50.0%
TAACAACGTGCGAAGTGTGG+TGG + Chr5:89925054-89925073 MsG0580028984.01.T01:exon 50.0%
TGCAGGTAACTCTAACTCGG+GGG + Chr5:89923532-89923551 MsG0580028984.01.T01:intron 50.0%
TTGATCTATACGCAGGTGCC+TGG - Chr5:89922139-89922158 None:intergenic 50.0%
! AGAAGTTGCTCGATTTGCGC+TGG + Chr5:89922226-89922245 MsG0580028984.01.T01:CDS 50.0%
! CTTGGTCAGCAGCTTTTCGA+TGG - Chr5:89922208-89922227 None:intergenic 50.0%
! GCTGGAGTACCTTACCAAGA+AGG + Chr5:89922244-89922263 MsG0580028984.01.T01:CDS 50.0%
! GGCTAATAAGAAGGCACGGA+TGG + Chr5:89924456-89924475 MsG0580028984.01.T01:CDS 50.0%
!! AAGGGTGTTGCTGATCCTGT+GGG + Chr5:89924109-89924128 MsG0580028984.01.T01:CDS 50.0%
!! AAGTGTGATGGTGGATGGGT+TGG + Chr5:89922157-89922176 MsG0580028984.01.T01:CDS 50.0%
!! TTGCAAGGCCTTTGGTTTGG+TGG - Chr5:89923603-89923622 None:intergenic 50.0%
AGTGCAGCACTTGGTTGCTC+AGG - Chr5:89924385-89924404 None:intergenic 55.0%
CAAGGACGTTGCTGATCCTG+TGG + Chr5:89923976-89923995 MsG0580028984.01.T01:CDS 55.0%
CGGTGGGCATCTTCAGCTAT+TGG + Chr5:89924201-89924220 MsG0580028984.01.T01:CDS 55.0%
GGTGCACAGAAGCTTGTGTC+TGG + Chr5:89924797-89924816 MsG0580028984.01.T01:intron 55.0%
GGTGGGCATCTTCAGCTACT+GGG + Chr5:89923938-89923957 MsG0580028984.01.T01:CDS 55.0%
! TGGTGGGCATCTTCAGCTAC+TGG + Chr5:89923937-89923956 MsG0580028984.01.T01:CDS 55.0%
!! CAAGGGTGTTGCTGATCCTG+TGG + Chr5:89924108-89924127 MsG0580028984.01.T01:CDS 55.0%
GCGCAACGAGGGATCAATCC+AGG + Chr5:89922118-89922137 MsG0580028984.01.T01:CDS 60.0%
GGGAGCTGTGGAGGAAGTTC+AGG - Chr5:89921399-89921418 None:intergenic 60.0%
TTACGAGCAGGGGGGAGCTG+TGG - Chr5:89921411-89921430 None:intergenic 65.0%
CGAGCAGGGGGGAGCTGTGG+AGG - Chr5:89921408-89921427 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr5 gene 89921103 89925329 89921103 ID=MsG0580028984.01;Name=MsG0580028984.01
Chr5 mRNA 89921103 89925329 89921103 ID=MsG0580028984.01.T01;Parent=MsG0580028984.01;Name=MsG0580028984.01.T01;_AED=0.27;_eAED=0.27;_QI=248|1|1|1|0.75|0.6|5|273|507
Chr5 exon 89921103 89921426 89921103 ID=MsG0580028984.01.T01:exon:17537;Parent=MsG0580028984.01.T01
Chr5 exon 89922051 89922298 89922051 ID=MsG0580028984.01.T01:exon:17538;Parent=MsG0580028984.01.T01
Chr5 exon 89923231 89923441 89923231 ID=MsG0580028984.01.T01:exon:17539;Parent=MsG0580028984.01.T01
Chr5 exon 89923537 89924485 89923537 ID=MsG0580028984.01.T01:exon:17540;Parent=MsG0580028984.01.T01
Chr5 exon 89925017 89925329 89925017 ID=MsG0580028984.01.T01:exon:17541;Parent=MsG0580028984.01.T01
Chr5 five_prime_UTR 89921103 89921350 89921103 ID=MsG0580028984.01.T01:five_prime_utr;Parent=MsG0580028984.01.T01
Chr5 CDS 89921351 89921426 89921351 ID=MsG0580028984.01.T01:cds;Parent=MsG0580028984.01.T01
Chr5 CDS 89922051 89922298 89922051 ID=MsG0580028984.01.T01:cds;Parent=MsG0580028984.01.T01
Chr5 CDS 89923231 89923441 89923231 ID=MsG0580028984.01.T01:cds;Parent=MsG0580028984.01.T01
Chr5 CDS 89923537 89924485 89923537 ID=MsG0580028984.01.T01:cds;Parent=MsG0580028984.01.T01
Chr5 CDS 89925017 89925056 89925017 ID=MsG0580028984.01.T01:cds;Parent=MsG0580028984.01.T01
Chr5 three_prime_UTR 89925057 89925329 89925057 ID=MsG0580028984.01.T01:three_prime_utr;Parent=MsG0580028984.01.T01
Gene Sequence

>MsG0580028984.01.T01

ATGGCTTCTTCATCTTCTGCTCCGCTGAATCGAGCTTCAGTTTCACCTGAACTTCCTCCACAGCTCCCCCCTGCTCCAATGTTTAAAAATAATTTGATACAATTTGCTTTGAAGTCAAACATGAAACATCCTGAGTTTTTTTCGCGCAACGAGGGATCAATCCAGGCACCTGCGTATAGATCAAGTGTGATGGTGGATGGGTTGGTTTTCACTTCGCAACTTACTTTCTTCCATCGAAAAGCTGCTGACCAAGAAGTTGCTCGATTTGCGCTGGAGTACCTTACCAAGAAGGTTAAAGACGAGGCATACTCTATTATGAGCGAGGCAGTTACATTTTGCAAGACCGTGTTGAATGAGTATGCTTCAAAGCTGAATATACAACTACCTACATATAATTCTGTGGAGTACAAAGAGGCGATTCCATATTTTGTATGTACTTTAGATTTGAATGGTACAAGATACACTGGACATGCAGCTAGAAGAAAAAAAGATGCAGTGGAATTAGCAGCTCGTGCCGCTATTCTTTCAATCCTCGGTAACTCTAACTCGGGGGTTCTGCTTGCTCAGATAATCAAAACAAAAGCTAAACTCTTTGATTCCACCAAACCAAAGGCCTTGCAACCTACATGCGATAGTGTACTTGTCTTACCCGAGGAATATTCTGAACGTTCCTCTTTGCTTCTTCAGCTATTTGGAGCTAAAGACAAGGACAAGGATGTTGCTGATCCTGTCGGTAATGATAATACCTTGCAACCTACCAGGGATAGTGTAATTGTCTCACCCATAGGAAATTCTTCACATTCTGGTGGGCAAATTCAGCTACTCGATGATAAAGACAAGGAAACAGATGTTGCTGATCCTGTGGGTAATGATAATACCTTGCAACCTACTCGGGATAGTGTAATTGTCTCACCCATGGGAAATTCTGCACATTCTGGTGGGCATCTTCAGCTACTGGATGATAAAGAGAAAAACAAGGACGTTGCTGATCCTGTGGGTAATGATAATACCTTGCAACCTACTCGGGATAGTGTAATGGTCTCACCCTTGGGAAATTCTGCACATTCTGGTGGGCATCTTCAGCTACTGGGTGATAAAGACAAGGACAAGGGTGTTGCTGATCCTGTGGGTAATGATAATACTTTGCAACCTACTCGTGATAGTGTAATTGTCTCACCCATGAAAAATTCTGCACATTCCGGTGGGCATCTTCAGCTATTGGGTGCTAAAGACAAGGTGGTTACTGATCCTATGGGTAATGATAATATTAATGAGATTCAAATGGCATGTCCTGAGTCTGGCCCAATTATTTCCACATCTCAACAGCCTGAGATGCAAACACATGAATTAACACCTGAAGCTGCAAAGTCTTCAAATGAGCCTGAGCAACCAAGTGCTGCACTTCCTATTGATACTGGTGTGAGTGTAAAAAGGCGTCGAAGGCTAAAATACAAGGCTAATAAGAAGGCACGGATGGAAGCTGAGTTAAAAGCTTTGAATGATAGTTCTTGTGTGGCACAGTAA
Protein sequence

>MsG0580028984.01.T01

MASSSSAPLNRASVSPELPPQLPPAPMFKNNLIQFALKSNMKHPEFFSRNEGSIQAPAYRSSVMVDGLVFTSQLTFFHRKAADQEVARFALEYLTKKVKDEAYSIMSEAVTFCKTVLNEYASKLNIQLPTYNSVEYKEAIPYFVCTLDLNGTRYTGHAARRKKDAVELAARAAILSILGNSNSGVLLAQIIKTKAKLFDSTKPKALQPTCDSVLVLPEEYSERSSLLLQLFGAKDKDKDVADPVGNDNTLQPTRDSVIVSPIGNSSHSGGQIQLLDDKDKETDVADPVGNDNTLQPTRDSVIVSPMGNSAHSGGHLQLLDDKEKNKDVADPVGNDNTLQPTRDSVMVSPLGNSAHSGGHLQLLGDKDKDKGVADPVGNDNTLQPTRDSVIVSPMKNSAHSGGHLQLLGAKDKVVTDPMGNDNINEIQMACPESGPIISTSQQPEMQTHELTPEAAKSSNEPEQPSAALPIDTGVSVKRRRRLKYKANKKARMEAELKALNDSSCVAQ*