AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580029247.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580029247.01.T01 MTR_3g011360 70.718 543 144 3 1 530 374 914 0.0 766
MsG0580029247.01.T01 MTR_3g011370 69.613 543 152 2 1 530 404 946 0.0 745
MsG0580029247.01.T01 MTR_0691s0020 70.849 542 145 2 2 530 405 946 0.0 744
MsG0580029247.01.T01 MTR_3g011390 68.450 542 158 2 2 530 407 948 0.0 736
MsG0580029247.01.T01 MTR_3g011300 70.556 540 145 3 2 529 405 942 0.0 736
MsG0580029247.01.T01 MTR_3g011280 65.683 542 173 2 2 530 405 946 0.0 711
MsG0580029247.01.T01 MTR_3g011280 65.683 542 173 2 2 530 373 914 0.0 710
MsG0580029247.01.T01 MTR_3g011480 67.712 542 161 3 2 530 405 945 0.0 701
MsG0580029247.01.T01 MTR_3g011460 66.421 542 168 3 2 530 405 945 0.0 694
MsG0580029247.01.T01 MTR_3g011270 65.250 541 175 2 2 529 404 944 0.0 687
MsG0580029247.01.T01 MTR_3g011420 62.593 540 186 5 2 526 405 943 0.0 652
MsG0580029247.01.T01 MTR_3g019340 62.362 542 174 3 2 530 376 900 0.0 635
MsG0580029247.01.T01 MTR_3g012240 54.461 538 228 4 2 522 450 987 0.0 575
MsG0580029247.01.T01 MTR_3g012310 54.259 540 233 3 2 527 404 943 0.0 574
MsG0580029247.01.T01 MTR_3g012250 52.425 536 236 5 2 522 409 940 0.0 533
MsG0580029247.01.T01 MTR_3g012060 51.306 536 247 3 2 523 400 935 3.10e-177 524
MsG0580029247.01.T01 MTR_3g012090 52.505 539 239 4 2 523 403 941 8.80e-176 520
MsG0580029247.01.T01 MTR_1g016210 51.589 535 245 5 2 523 406 939 1.75e-168 501
MsG0580029247.01.T01 MTR_3g012050 51.859 538 241 5 2 522 389 925 4.29e-163 487
MsG0580029247.01.T01 MTR_3g056585 47.929 507 259 3 4 505 397 903 1.42e-148 449
MsG0580029247.01.T01 MTR_3g055930 44.592 527 277 9 3 515 418 943 8.54e-134 412
MsG0580029247.01.T01 MTR_3g069210 42.718 515 286 6 3 512 395 905 2.08e-122 381
MsG0580029247.01.T01 MTR_3g056625 41.822 483 268 5 4 473 87 569 1.29e-120 367
MsG0580029247.01.T01 MTR_3g012270 54.545 374 154 4 2 360 409 781 6.84e-119 368
MsG0580029247.01.T01 MTR_3g013700 42.752 545 203 10 2 530 244 695 6.69e-118 364
MsG0580029247.01.T01 MTR_3g055720 42.218 514 282 11 4 510 405 910 1.23e-116 366
MsG0580029247.01.T01 MTR_3g456030 42.353 510 284 8 4 507 400 905 1.27e-116 367
MsG0580029247.01.T01 MTR_3g056380 41.651 521 282 7 3 507 403 917 5.87e-114 360
MsG0580029247.01.T01 MTR_5g027860 39.591 538 304 10 1 519 383 918 3.44e-113 358
MsG0580029247.01.T01 MTR_3g055740 40.275 509 296 6 4 507 343 848 8.00e-112 352
MsG0580029247.01.T01 MTR_5g027900 38.476 538 310 10 1 519 385 920 9.40e-112 354
MsG0580029247.01.T01 MTR_5g027910 39.011 546 299 12 1 519 389 927 4.79e-111 352
MsG0580029247.01.T01 MTR_1g078150 42.149 484 265 7 3 473 202 683 8.20e-111 346
MsG0580029247.01.T01 MTR_3g056590 42.052 497 269 9 3 482 412 906 6.87e-109 345
MsG0580029247.01.T01 MTR_1g078190 41.071 504 267 11 3 481 401 899 3.27e-107 342
MsG0580029247.01.T01 MTR_3g055870 40.748 508 269 8 4 505 399 880 4.31e-107 340
MsG0580029247.01.T01 MTR_3g056200 40.385 520 291 9 3 507 405 920 4.57e-107 341
MsG0580029247.01.T01 MTR_5g027870 37.387 551 315 11 2 530 389 931 1.46e-106 340
MsG0580029247.01.T01 MTR_3g456070 40.000 485 286 5 4 484 245 728 1.79e-106 335
MsG0580029247.01.T01 MTR_3g056410 40.194 515 293 6 3 509 372 879 3.70e-106 338
MsG0580029247.01.T01 MTR_3g055830 39.096 509 294 10 5 507 403 901 4.78e-106 338
MsG0580029247.01.T01 MTR_3g056360 40.194 515 293 6 3 509 381 888 8.09e-106 337
MsG0580029247.01.T01 MTR_5g027810 37.546 538 315 10 1 519 388 923 4.78e-105 336
MsG0580029247.01.T01 MTR_3g056310 40.577 520 290 8 3 507 407 922 5.13e-103 330
MsG0580029247.01.T01 MTR_3g055710 40.316 506 265 10 4 504 243 716 9.52e-103 325
MsG0580029247.01.T01 MTR_3g056620 39.366 536 290 8 3 507 411 942 1.77e-102 329
MsG0580029247.01.T01 MTR_3g056190 39.652 517 288 9 3 498 412 925 5.82e-100 322
MsG0580029247.01.T01 MTR_3g056320 39.692 519 296 8 5 507 411 928 5.95e-98 317
MsG0580029247.01.T01 MTR_3g455900 37.402 508 252 11 4 505 284 731 9.90e-95 305
MsG0580029247.01.T01 MTR_3g455940 37.333 525 266 10 10 525 296 766 5.58e-93 301
MsG0580029247.01.T01 MTR_3g455910 38.158 456 277 5 33 484 354 808 2.85e-89 292
MsG0580029247.01.T01 MTR_5g092950 41.364 440 249 5 43 473 1 440 7.66e-87 275
MsG0580029247.01.T01 MTR_3g012080 52.838 229 104 2 298 522 1 229 2.23e-73 233
MsG0580029247.01.T01 MTR_3g012080 52.444 225 103 2 302 522 2 226 2.03e-71 228
MsG0580029247.01.T01 MTR_1g031720 42.239 393 101 7 152 530 721 1001 5.10e-71 245
MsG0580029247.01.T01 MTR_1g016217 49.200 250 126 1 274 523 1 249 1.26e-64 211
MsG0580029247.01.T01 MTR_1g011990 36.364 473 230 10 3 467 371 780 2.78e-63 221
MsG0580029247.01.T01 MTR_1g078170 32.877 511 212 14 6 481 1 415 4.31e-57 198
MsG0580029247.01.T01 MTR_3g056635 48.848 217 108 2 3 216 406 622 2.54e-55 196
MsG0580029247.01.T01 MTR_7g015770 29.228 544 321 19 17 507 405 937 5.90e-54 196
MsG0580029247.01.T01 MTR_3g456080 40.672 268 151 3 189 453 28 290 7.28e-54 184
MsG0580029247.01.T01 MTR_5g021080 29.528 508 331 10 19 505 404 905 9.09e-53 193
MsG0580029247.01.T01 MTR_2g038510 29.128 539 339 16 2 509 399 925 1.74e-51 189
MsG0580029247.01.T01 MTR_3g056300 35.503 338 160 6 23 357 350 632 1.75e-51 186
MsG0580029247.01.T01 MTR_1g090690 27.071 495 317 11 28 481 1042 1533 7.67e-42 161
MsG0580029247.01.T01 MTR_4g073840 35.772 246 144 7 22 257 431 672 1.77e-37 148
MsG0580029247.01.T01 MTR_4g021690 31.104 299 170 10 19 291 395 683 3.74e-28 119
MsG0580029247.01.T01 MTR_3g015280 27.949 390 254 13 11 378 385 769 4.65e-28 119
MsG0580029247.01.T01 MTR_4g022540 29.123 285 190 6 19 291 394 678 5.53e-28 119
MsG0580029247.01.T01 MTR_4g022480 30.104 289 185 9 19 291 394 681 6.29e-28 119
MsG0580029247.01.T01 MTR_4g022560 29.210 291 187 10 19 291 394 683 1.10e-27 118
MsG0580029247.01.T01 MTR_1g090680 25.536 513 319 14 30 483 960 1468 1.18e-27 118
MsG0580029247.01.T01 MTR_3g015500 27.924 419 262 18 13 408 425 826 2.05e-27 117
MsG0580029247.01.T01 MTR_4g022460 29.897 291 183 11 19 291 395 682 2.27e-27 117
MsG0580029247.01.T01 MTR_2g014840 32.177 317 159 14 17 294 402 701 2.59e-27 117
MsG0580029247.01.T01 MTR_1g090673 25.532 517 317 14 30 484 864 1374 2.66e-27 117
MsG0580029247.01.T01 MTR_1g047800 31.379 290 176 7 15 289 397 678 4.86e-27 116
MsG0580029247.01.T01 MTR_4g050790 27.251 411 236 15 13 378 387 779 6.96e-27 115
MsG0580029247.01.T01 MTR_7g078300 26.070 514 279 18 18 508 412 847 7.66e-27 115
MsG0580029247.01.T01 MTR_3g056180 34.649 228 136 2 284 507 81 299 1.35e-26 110
MsG0580029247.01.T01 MTR_3g056180 60.563 71 27 1 32 101 5 75 5.17e-20 91.3
MsG0580029247.01.T01 MTR_3g014040 29.223 373 227 14 19 369 411 768 1.57e-26 115
MsG0580029247.01.T01 MTR_3g015550 27.152 453 252 17 13 408 387 818 1.81e-26 114
MsG0580029247.01.T01 MTR_3g015550 27.152 453 252 17 13 408 424 855 1.94e-26 114
MsG0580029247.01.T01 MTR_2g063777 30.120 332 191 15 18 328 407 718 2.08e-26 114
MsG0580029247.01.T01 MTR_7g091140 25.328 533 297 18 3 512 412 866 3.07e-26 114
MsG0580029247.01.T01 MTR_5g076840 25.198 504 292 14 18 505 417 851 3.67e-26 113
MsG0580029247.01.T01 MTR_8g038590 31.561 301 181 10 17 299 413 706 7.44e-26 112
MsG0580029247.01.T01 MTR_3g055900 53.922 102 44 1 23 121 337 438 2.95e-25 108
MsG0580029247.01.T01 MTR_4g119195 29.814 322 209 8 18 334 415 724 4.30e-25 110
MsG0580029247.01.T01 MTR_3g022130 26.011 569 361 18 4 520 368 928 5.64e-25 110
MsG0580029247.01.T01 MTR_3g033380 31.907 257 147 10 18 257 411 656 5.72e-25 110
MsG0580029247.01.T01 MTR_8g038570 30.330 333 203 11 16 327 416 740 5.76e-25 110
MsG0580029247.01.T01 MTR_4g119195 29.814 322 209 8 18 334 415 724 7.96e-25 109
MsG0580029247.01.T01 MTR_8g020790 25.102 490 320 11 28 488 681 1152 1.08e-24 109
MsG0580029247.01.T01 MTR_3g027470 28.682 387 242 12 18 380 318 694 1.88e-24 108
MsG0580029247.01.T01 MTR_3g015560 27.533 454 245 20 13 408 387 814 2.10e-24 108
MsG0580029247.01.T01 MTR_3g031940 30.980 255 151 8 18 257 411 655 2.28e-24 108
MsG0580029247.01.T01 MTR_8g445980 27.500 360 231 13 19 366 408 749 2.73e-24 107
MsG0580029247.01.T01 MTR_2g014730 32.746 284 151 11 17 280 381 644 2.82e-24 108
MsG0580029247.01.T01 MTR_2g062360 26.346 520 280 22 10 512 168 601 5.03e-24 106
MsG0580029247.01.T01 MTR_3g020890 30.026 383 225 14 17 369 397 766 5.09e-24 107
MsG0580029247.01.T01 MTR_2g014720 29.167 312 155 7 17 281 308 600 5.81e-24 107
MsG0580029247.01.T01 MTR_3g032150 30.469 256 152 9 18 257 405 650 6.04e-24 107
MsG0580029247.01.T01 MTR_3g032370 30.469 256 152 9 18 257 405 650 7.21e-24 106
MsG0580029247.01.T01 MTR_3g022790 27.455 499 300 23 17 473 400 878 1.53e-23 105
MsG0580029247.01.T01 MTR_3g015260 27.888 502 291 19 17 482 409 875 1.59e-23 105
MsG0580029247.01.T01 MTR_3g035810 26.869 495 320 19 17 475 372 860 1.72e-23 105
MsG0580029247.01.T01 MTR_3g015260 27.888 502 291 19 17 482 409 875 1.74e-23 105
MsG0580029247.01.T01 MTR_3g032500 31.641 256 149 8 18 257 411 656 1.94e-23 105
MsG0580029247.01.T01 MTR_5g095910 28.676 408 226 18 17 381 405 790 2.43e-23 105
MsG0580029247.01.T01 MTR_3g033110 31.250 256 148 10 19 257 407 651 2.76e-23 105
MsG0580029247.01.T01 MTR_1g047910 25.394 508 305 18 18 512 421 867 2.99e-23 104
MsG0580029247.01.T01 MTR_7g091550 25.440 511 274 19 7 490 415 845 3.48e-23 104
MsG0580029247.01.T01 MTR_3g032760 26.842 380 237 16 18 369 407 773 4.58e-23 104
MsG0580029247.01.T01 MTR_6g084550 31.783 258 146 12 18 257 392 637 6.41e-23 103
MsG0580029247.01.T01 MTR_3g032200 29.730 259 157 8 18 261 411 659 7.07e-23 103
MsG0580029247.01.T01 MTR_3g018930 28.084 381 239 12 17 369 409 782 9.27e-23 103
MsG0580029247.01.T01 MTR_3g027200 27.812 489 303 16 18 473 409 880 1.18e-22 102
MsG0580029247.01.T01 MTR_3g435720 31.395 258 147 12 18 257 407 652 1.32e-22 102
MsG0580029247.01.T01 MTR_3g070590 26.992 389 232 13 17 372 391 760 1.44e-22 102
MsG0580029247.01.T01 MTR_3g035960 32.540 252 151 10 18 257 407 651 1.63e-22 102
MsG0580029247.01.T01 MTR_3g018930 28.084 381 239 12 17 369 409 782 1.93e-22 102
MsG0580029247.01.T01 MTR_1g022070 29.114 237 144 6 28 248 334 562 3.57e-22 100
MsG0580029247.01.T01 MTR_3g033080 28.152 341 181 15 19 307 407 735 4.07e-22 101
MsG0580029247.01.T01 MTR_6g047450 27.795 331 207 11 19 334 391 704 6.23e-22 100
MsG0580029247.01.T01 MTR_4g050410 28.087 413 254 16 19 400 407 807 7.68e-22 100
MsG0580029247.01.T01 MTR_7g491180 26.004 523 296 22 3 507 412 861 8.89e-22 100
MsG0580029247.01.T01 MTR_7g091190 26.004 523 296 22 3 507 412 861 8.89e-22 100
MsG0580029247.01.T01 MTR_3g022300 26.984 504 297 21 18 472 409 890 1.19e-21 99.8
MsG0580029247.01.T01 MTR_3g033860 27.473 364 233 11 18 358 407 762 1.45e-21 99.8
MsG0580029247.01.T01 MTR_0002s0090 30.928 291 171 12 18 288 407 687 1.47e-21 99.8
MsG0580029247.01.T01 MTR_3g035500 30.928 291 171 12 18 288 407 687 1.47e-21 99.8
MsG0580029247.01.T01 MTR_0005s0200 26.104 498 307 18 18 472 423 902 1.49e-21 99.4
MsG0580029247.01.T01 MTR_1g078490 25.933 509 285 18 18 507 405 840 1.56e-21 99.4
MsG0580029247.01.T01 MTR_3g027250 27.898 509 292 22 17 482 392 868 1.59e-21 99.4
MsG0580029247.01.T01 MTR_3g032960 29.119 261 149 8 18 257 407 652 1.75e-21 99.4
MsG0580029247.01.T01 MTR_3g021340 26.295 502 316 21 17 480 390 875 1.92e-21 99.0
MsG0580029247.01.T01 MTR_0002s0110 30.104 289 174 11 19 288 408 687 2.85e-21 98.6
MsG0580029247.01.T01 MTR_3g035480 30.104 289 174 11 19 288 408 687 3.09e-21 98.6
MsG0580029247.01.T01 MTR_3g014470 29.329 283 180 10 23 297 377 647 3.36e-21 98.2
MsG0580029247.01.T01 MTR_3g035940 30.104 289 174 11 19 288 408 687 3.46e-21 98.6
MsG0580029247.01.T01 MTR_3g032800 30.196 255 152 9 19 257 408 652 3.62e-21 98.2
MsG0580029247.01.T01 MTR_0002s0120 30.000 290 175 11 18 288 190 470 3.63e-21 98.2
MsG0580029247.01.T01 MTR_3g025360 26.397 519 320 19 4 482 402 898 4.18e-21 98.2
MsG0580029247.01.T01 MTR_3g071070 26.893 383 232 12 18 369 187 552 4.30e-21 97.8
MsG0580029247.01.T01 MTR_3g033240 29.688 256 154 9 18 257 410 655 4.95e-21 97.8
MsG0580029247.01.T01 MTR_3g030960 29.688 256 154 9 18 257 407 652 5.10e-21 97.8
MsG0580029247.01.T01 MTR_3g071130 26.893 383 232 12 18 369 392 757 5.60e-21 97.8
MsG0580029247.01.T01 MTR_3g019040 26.680 491 311 21 17 473 407 882 1.18e-20 96.7
MsG0580029247.01.T01 MTR_3g021380 26.559 497 319 20 17 475 378 866 1.80e-20 96.3
MsG0580029247.01.T01 MTR_3g056610 54.945 91 37 2 3 92 353 440 1.82e-20 95.5
MsG0580029247.01.T01 MTR_3g056610 31.325 249 130 8 203 442 439 655 3.49e-17 85.1
MsG0580029247.01.T01 MTR_8g043600 30.531 226 129 7 19 240 356 557 2.26e-20 95.1
MsG0580029247.01.T01 MTR_3g014080 25.524 525 315 23 4 481 388 883 2.39e-20 95.9
MsG0580029247.01.T01 MTR_7g091200 27.303 304 178 8 7 299 397 668 2.60e-20 95.5
MsG0580029247.01.T01 MTR_7g491190 27.303 304 178 8 7 299 378 649 2.83e-20 95.5
MsG0580029247.01.T01 MTR_8g030860 26.943 386 229 16 18 369 414 780 2.83e-20 95.5
MsG0580029247.01.T01 MTR_3g014080 25.524 525 315 23 4 481 388 883 3.01e-20 95.5
MsG0580029247.01.T01 MTR_2g038930 27.381 336 201 10 14 327 240 554 5.34e-20 94.7
MsG0580029247.01.T01 MTR_7g078790 29.389 262 155 9 15 257 389 639 5.41e-20 94.4
MsG0580029247.01.T01 MTR_3g022400 27.344 512 305 22 15 482 378 866 7.38e-20 94.4
MsG0580029247.01.T01 MTR_3g034460 24.737 380 246 11 18 369 391 758 7.46e-20 94.4
MsG0580029247.01.T01 MTR_3g036050 28.710 310 176 11 18 306 19 304 7.78e-20 94.0
MsG0580029247.01.T01 MTR_3g022400 27.344 512 305 22 15 482 378 866 8.40e-20 94.0
MsG0580029247.01.T01 MTR_3g022940 26.337 505 310 22 18 475 387 876 8.73e-20 94.0
MsG0580029247.01.T01 MTR_3g034380 25.272 368 235 10 18 358 407 761 9.39e-20 94.0
MsG0580029247.01.T01 MTR_3g018980 29.730 333 209 13 18 333 408 732 1.04e-19 93.6
MsG0580029247.01.T01 MTR_3g030980 28.906 256 156 9 18 257 407 652 1.13e-19 93.6
MsG0580029247.01.T01 MTR_7g406780 40.800 125 44 1 4 128 157 251 1.17e-19 90.5
MsG0580029247.01.T01 MTR_3g034430 25.789 380 242 13 18 369 407 774 1.22e-19 93.6
MsG0580029247.01.T01 MTR_3g018980 29.730 333 209 13 18 333 408 732 1.48e-19 93.2
MsG0580029247.01.T01 MTR_2g038900 27.381 336 201 10 14 327 403 717 1.60e-19 93.2
MsG0580029247.01.T01 MTR_3g034650 27.636 275 152 10 25 292 1 235 1.77e-19 92.8
MsG0580029247.01.T01 MTR_1g037610 30.116 259 142 11 23 257 412 655 1.82e-19 93.2
MsG0580029247.01.T01 MTR_2g078070 24.757 412 272 16 18 399 408 811 2.01e-19 92.8
MsG0580029247.01.T01 MTR_3g022230 25.403 496 303 22 19 473 410 879 2.04e-19 92.8
MsG0580029247.01.T01 MTR_3g023030 27.071 495 308 19 18 473 410 890 2.29e-19 92.8
MsG0580029247.01.T01 MTR_3g024460 29.167 288 186 8 19 292 11 294 2.36e-19 92.4
MsG0580029247.01.T01 MTR_2g038760 26.786 336 203 9 14 327 414 728 2.37e-19 92.8
MsG0580029247.01.T01 MTR_5g035530 25.600 500 296 20 17 481 279 737 2.53e-19 92.4
MsG0580029247.01.T01 MTR_2g039040 28.571 294 177 10 14 283 275 559 4.87e-19 90.9
MsG0580029247.01.T01 MTR_7g006780 40.800 125 44 1 4 128 232 326 5.44e-19 90.1
MsG0580029247.01.T01 MTR_3g435740 27.660 329 204 14 19 328 452 765 5.55e-19 91.7
MsG0580029247.01.T01 MTR_3g014320 28.929 280 160 11 23 280 412 674 6.21e-19 91.3
MsG0580029247.01.T01 MTR_0256s0050 28.485 330 203 12 19 334 363 673 7.03e-19 91.3
MsG0580029247.01.T01 MTR_3g014510 29.392 296 168 11 23 292 412 692 7.69e-19 90.9
MsG0580029247.01.T01 MTR_6g052760 28.931 318 181 14 19 313 393 688 1.16e-18 90.5
MsG0580029247.01.T01 MTR_3g028040 27.049 366 232 13 18 358 407 762 1.62e-18 90.1
MsG0580029247.01.T01 MTR_3g014360 29.572 257 145 10 23 257 397 639 1.62e-18 90.1
MsG0580029247.01.T01 MTR_3g022870 26.295 502 312 21 31 489 404 890 1.66e-18 90.1
MsG0580029247.01.T01 MTR_6g016430 25.200 500 320 22 9 464 391 880 1.94e-18 89.7
MsG0580029247.01.T01 MTR_3g022920 25.832 511 331 21 17 487 379 881 2.57e-18 89.4
MsG0580029247.01.T01 MTR_7g021000 28.642 405 245 17 19 385 395 793 2.82e-18 89.0
MsG0580029247.01.T01 MTR_3g022600 26.214 515 296 21 18 472 409 899 4.82e-18 88.6
MsG0580029247.01.T01 MTR_8g011180 22.486 547 344 19 17 503 403 929 4.89e-18 88.2
MsG0580029247.01.T01 MTR_4g094540 26.196 397 246 15 19 381 418 801 4.98e-18 88.2
MsG0580029247.01.T01 MTR_0425s0020 26.824 507 295 21 19 472 410 893 6.14e-18 88.2
MsG0580029247.01.T01 MTR_0133s0030 23.810 504 306 19 19 488 392 851 6.57e-18 88.2
MsG0580029247.01.T01 MTR_3g435210 29.022 317 178 13 23 307 220 521 6.58e-18 87.8
MsG0580029247.01.T01 MTR_8g011320 23.984 246 177 6 17 257 331 571 7.95e-18 87.8
MsG0580029247.01.T01 MTR_3g021100 25.376 532 309 23 18 489 395 898 9.12e-18 87.4
MsG0580029247.01.T01 MTR_8g106550 26.287 369 223 13 22 365 343 687 1.50e-17 87.0
MsG0580029247.01.T01 MTR_3g021170 26.306 536 339 25 18 508 390 914 1.58e-17 86.7
MsG0580029247.01.T01 MTR_3g022570 26.893 383 240 16 17 369 429 801 1.66e-17 86.7
MsG0580029247.01.T01 MTR_7g084790 28.517 263 160 12 3 254 158 403 2.06e-17 85.1
MsG0580029247.01.T01 MTR_6g046570 27.036 307 199 10 19 313 397 690 2.26e-17 86.3
MsG0580029247.01.T01 MTR_0144s0060 27.273 275 182 8 14 280 385 649 3.02e-17 85.9
MsG0580029247.01.T01 MTR_6g052455 28.076 317 184 12 19 313 284 578 3.22e-17 85.9
MsG0580029247.01.T01 MTR_3g022060 26.562 512 303 19 18 487 310 790 5.74e-17 85.1
MsG0580029247.01.T01 MTR_3g032340 29.730 259 155 11 19 261 413 660 6.52e-17 85.1
MsG0580029247.01.T01 MTR_5g071470 24.903 518 330 20 9 493 387 878 1.15e-16 84.0
MsG0580029247.01.T01 MTR_6g046620 25.816 337 212 13 14 334 342 656 2.41e-16 83.2
MsG0580029247.01.T01 MTR_1g008240 24.619 394 257 15 33 396 407 790 4.34e-16 82.4
MsG0580029247.01.T01 MTR_5g028610 24.877 406 264 14 27 399 380 777 5.00e-16 82.0
MsG0580029247.01.T01 MTR_5g028070 24.800 500 301 19 27 476 523 997 5.45e-16 82.0
MsG0580029247.01.T01 MTR_5g035280 26.493 268 182 6 17 275 400 661 5.87e-16 82.0
MsG0580029247.01.T01 MTR_1g045960 28.571 308 196 12 18 311 380 677 6.19e-16 81.6
MsG0580029247.01.T01 MTR_6g046930 25.076 331 215 11 19 334 389 701 6.87e-16 81.6
MsG0580029247.01.T01 MTR_5g035240 26.955 486 293 22 17 464 399 860 9.76e-16 80.9
MsG0580029247.01.T01 MTR_5g034770 25.000 500 338 17 23 502 390 872 1.01e-15 80.9
MsG0580029247.01.T01 MTR_0267s0070 27.839 273 145 9 26 257 422 683 1.08e-15 81.3
MsG0580029247.01.T01 MTR_8g011550 26.423 246 161 7 18 255 405 638 1.70e-15 80.1
MsG0580029247.01.T01 MTR_5g071800 25.879 398 248 16 9 380 387 763 2.32e-15 79.7
MsG0580029247.01.T01 MTR_3g023320 23.735 514 328 19 19 488 393 886 3.50e-15 79.3
MsG0580029247.01.T01 MTR_5g040770 24.254 536 306 24 17 482 165 670 3.82e-15 79.0
MsG0580029247.01.T01 MTR_8g037220 26.562 256 159 8 18 257 1179 1421 3.94e-15 79.3
MsG0580029247.01.T01 MTR_8g011850 27.468 233 139 9 18 234 1453 1671 4.43e-15 79.3
MsG0580029247.01.T01 MTR_8g037220 26.562 256 159 8 18 257 1400 1642 4.47e-15 79.3
MsG0580029247.01.T01 MTR_2g039090 26.126 333 222 9 17 331 390 716 4.66e-15 79.0
MsG0580029247.01.T01 MTR_5g071780 26.946 501 316 22 17 488 395 874 4.85e-15 79.0
MsG0580029247.01.T01 MTR_6g046450 27.309 249 157 8 19 258 441 674 5.36e-15 79.0
MsG0580029247.01.T01 MTR_0133s0020 27.076 277 178 10 16 275 387 656 5.65e-15 78.6
MsG0580029247.01.T01 MTR_3g032110 29.231 260 156 12 19 261 409 657 6.41e-15 78.6
MsG0580029247.01.T01 MTR_3g023030 25.558 493 284 18 18 473 410 856 1.11e-14 77.8
MsG0580029247.01.T01 MTR_7g078630 27.925 265 125 8 18 278 329 531 1.17e-14 77.8
MsG0580029247.01.T01 MTR_5g071570 26.478 423 249 19 19 406 398 793 1.56e-14 77.4
MsG0580029247.01.T01 MTR_8g027540 25.000 244 175 6 18 257 404 643 1.58e-14 77.4
MsG0580029247.01.T01 MTR_3g007190 29.680 219 121 10 23 220 330 536 1.63e-14 77.4
MsG0580029247.01.T01 MTR_5g037450 24.167 480 323 17 19 481 406 861 3.54e-14 76.3
MsG0580029247.01.T01 MTR_6g471150 24.781 343 209 11 5 333 292 599 5.53e-14 75.5
MsG0580029247.01.T01 MTR_4g091450 26.613 248 156 8 12 245 271 506 6.13e-14 75.1
MsG0580029247.01.T01 MTR_6g452490 23.171 246 179 7 17 257 401 641 8.53e-14 74.7
MsG0580029247.01.T01 MTR_6g046130 25.816 337 215 12 14 334 385 702 9.27e-14 74.7
MsG0580029247.01.T01 MTR_3g035840 40.404 99 54 3 18 114 407 502 2.30e-13 72.8
MsG0580029247.01.T01 MTR_4g091380 26.625 323 196 11 5 305 373 676 2.69e-13 73.2
MsG0580029247.01.T01 MTR_3g033130 26.510 298 164 11 18 269 392 680 3.08e-13 73.2
MsG0580029247.01.T01 MTR_5g037460 24.498 249 170 7 19 257 263 503 3.11e-13 73.2
MsG0580029247.01.T01 MTR_7g013560 24.204 314 197 8 18 328 405 680 3.78e-13 72.8
MsG0580029247.01.T01 MTR_0137s0010 26.426 333 199 14 72 369 1 322 8.29e-13 71.6
MsG0580029247.01.T01 MTR_8g011600 27.237 257 163 8 18 269 238 475 8.66e-13 71.6
MsG0580029247.01.T01 MTR_7g078640 27.500 240 142 8 18 236 412 640 1.47e-12 70.9
MsG0580029247.01.T01 MTR_5g071670 25.000 392 244 17 17 381 389 757 1.47e-12 71.2
MsG0580029247.01.T01 MTR_7g071940 23.858 394 246 14 18 381 391 760 1.64e-12 70.9
MsG0580029247.01.T01 MTR_3g084010 58.182 55 22 1 61 114 43 97 3.54e-12 63.2
MsG0580029247.01.T01 MTR_8g011300 22.857 245 181 6 17 257 400 640 3.87e-12 69.7
MsG0580029247.01.T01 MTR_5g071220 23.969 388 272 11 9 380 387 767 7.79e-12 68.6
MsG0580029247.01.T01 MTR_5g071220 23.969 388 272 11 9 380 387 767 1.07e-11 68.2
MsG0580029247.01.T01 MTR_8g011590 24.096 249 170 7 18 257 288 526 1.81e-11 67.4
MsG0580029247.01.T01 MTR_3g022870 24.082 490 302 20 31 489 404 854 2.16e-11 67.4
MsG0580029247.01.T01 MTR_5g074530 65.217 46 16 0 307 352 68 113 2.94e-11 61.2
MsG0580029247.01.T01 MTR_5g072250 22.798 386 240 13 17 369 394 754 3.12e-11 66.6
MsG0580029247.01.T01 MTR_8g011170 26.971 241 161 7 17 249 389 622 4.38e-11 66.2
MsG0580029247.01.T01 MTR_7g022290 21.573 496 337 13 42 510 50 520 4.82e-11 65.5
MsG0580029247.01.T01 MTR_5g070470 25.773 291 178 13 17 288 395 666 5.24e-11 66.2
MsG0580029247.01.T01 MTR_3g022740 27.469 324 181 13 176 482 292 578 7.35e-11 65.5
MsG0580029247.01.T01 MTR_6g081940 42.857 70 38 1 17 84 95 164 8.30e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580029247.01.T01 AT3G07040 29.190 531 345 10 2 512 399 918 6.54e-64 224
MsG0580029247.01.T01 AT5G43470 28.600 507 335 12 16 505 405 901 6.36e-46 173
MsG0580029247.01.T01 AT5G43470 28.600 507 335 12 16 505 405 901 6.36e-46 173
MsG0580029247.01.T01 AT5G43470 28.600 507 335 12 16 505 405 901 6.36e-46 173
MsG0580029247.01.T01 AT5G43470 28.600 507 335 12 16 505 405 901 6.36e-46 173
MsG0580029247.01.T01 AT1G59780 27.103 535 335 15 17 523 399 906 8.86e-44 166
MsG0580029247.01.T01 AT5G48620 28.205 507 337 12 16 505 405 901 1.55e-43 166
MsG0580029247.01.T01 AT5G48620 28.205 507 337 12 16 505 405 901 1.55e-43 166
MsG0580029247.01.T01 AT5G48620 28.205 507 337 12 16 505 405 901 1.55e-43 166
MsG0580029247.01.T01 AT5G48620 28.205 507 337 12 16 505 405 901 1.55e-43 166
MsG0580029247.01.T01 AT5G48620 28.205 507 337 12 16 505 405 901 1.55e-43 166
MsG0580029247.01.T01 AT5G48620 28.205 507 337 12 16 505 405 901 1.55e-43 166
MsG0580029247.01.T01 AT1G59780 27.168 519 330 14 17 514 394 885 3.02e-43 165
MsG0580029247.01.T01 AT5G35450 26.389 504 345 11 16 505 399 890 2.48e-42 162
MsG0580029247.01.T01 AT5G35450 26.389 504 345 11 16 505 399 890 2.48e-42 162
MsG0580029247.01.T01 AT1G59620 26.181 508 326 10 13 505 264 737 6.67e-41 157
MsG0580029247.01.T01 AT1G58400 26.139 505 349 11 17 505 407 903 2.87e-39 153
MsG0580029247.01.T01 AT1G58400 26.139 505 349 11 17 505 407 903 2.87e-39 153
MsG0580029247.01.T01 AT1G58400 26.139 505 349 11 17 505 397 893 4.14e-39 152
MsG0580029247.01.T01 AT1G58390 25.528 521 344 12 11 505 397 899 1.32e-38 151
MsG0580029247.01.T01 AT1G58390 25.528 521 344 12 11 505 397 899 1.32e-38 151
MsG0580029247.01.T01 AT3G46730 27.500 480 283 16 18 469 401 843 8.12e-38 149
MsG0580029247.01.T01 AT3G46710 28.694 467 279 17 13 454 392 829 2.23e-36 144
MsG0580029247.01.T01 AT1G53350 25.540 509 349 11 17 505 401 899 7.43e-36 143
MsG0580029247.01.T01 AT1G50180 27.655 499 291 13 19 505 410 850 2.70e-35 141
MsG0580029247.01.T01 AT1G58410 24.658 511 358 14 11 505 396 895 3.07e-31 129
MsG0580029247.01.T01 AT1G58410 24.658 511 358 14 11 505 396 895 3.07e-31 129
MsG0580029247.01.T01 AT1G58410 24.658 511 358 14 11 505 396 895 3.07e-31 129
MsG0580029247.01.T01 AT1G58848 25.647 464 319 8 22 465 412 869 5.36e-31 128
MsG0580029247.01.T01 AT1G59218 25.647 464 319 8 22 465 412 869 5.36e-31 128
MsG0580029247.01.T01 AT1G59218 25.647 464 319 8 22 465 412 869 5.36e-31 128
MsG0580029247.01.T01 AT1G59218 25.647 464 319 8 22 465 412 869 5.36e-31 128
MsG0580029247.01.T01 AT1G58848 25.647 464 319 8 22 465 412 869 5.36e-31 128
MsG0580029247.01.T01 AT3G50950 29.114 395 235 16 2 369 382 758 7.76e-28 118
MsG0580029247.01.T01 AT3G50950 29.114 395 235 16 2 369 382 758 7.76e-28 118
MsG0580029247.01.T01 AT3G46530 26.923 416 265 13 22 429 405 789 1.35e-27 118
MsG0580029247.01.T01 AT1G58807 26.087 460 314 10 22 465 412 861 1.25e-26 115
MsG0580029247.01.T01 AT1G59124 26.087 460 314 10 22 465 412 861 1.25e-26 115
MsG0580029247.01.T01 AT1G58807 26.364 440 298 10 22 445 412 841 1.05e-24 108
MsG0580029247.01.T01 AT1G59124 26.364 440 298 10 22 445 412 841 1.05e-24 108
MsG0580029247.01.T01 AT1G10920 26.540 422 288 11 16 421 113 528 1.75e-24 107
MsG0580029247.01.T01 AT1G10920 26.540 422 288 11 16 421 113 528 1.75e-24 107
MsG0580029247.01.T01 AT1G58602 25.652 460 318 10 22 465 416 867 3.07e-24 107
MsG0580029247.01.T01 AT1G58602 25.652 460 318 10 22 465 416 867 3.07e-24 107
MsG0580029247.01.T01 AT1G10920 26.540 422 288 11 16 421 283 698 5.17e-24 106
MsG0580029247.01.T01 AT1G10920 26.540 422 288 11 16 421 283 698 5.17e-24 106
MsG0580029247.01.T01 AT1G10920 26.540 422 288 11 16 421 283 698 5.17e-24 106
MsG0580029247.01.T01 AT3G14460 29.429 350 199 14 2 329 392 715 8.55e-22 100
MsG0580029247.01.T01 AT1G58410 23.319 476 338 14 46 505 399 863 2.23e-20 95.5
MsG0580029247.01.T01 AT1G12280 28.455 246 135 8 16 236 388 617 9.09e-17 84.3
MsG0580029247.01.T01 AT3G14470 24.746 295 191 8 14 289 406 688 1.98e-16 83.2
MsG0580029247.01.T01 AT3G14470 24.746 295 191 8 14 289 406 688 1.98e-16 83.2
MsG0580029247.01.T01 AT4G10780 30.403 273 138 13 18 263 388 635 4.50e-15 79.0
MsG0580029247.01.T01 AT4G10780 30.403 273 138 13 18 263 388 635 4.79e-15 79.0
MsG0580029247.01.T01 AT4G27220 26.460 291 160 11 19 278 348 615 6.83e-15 78.6
MsG0580029247.01.T01 AT4G27220 26.460 291 160 11 19 278 356 623 7.17e-15 78.2
MsG0580029247.01.T01 AT1G61190 24.458 507 297 20 11 469 377 845 2.72e-13 73.2
MsG0580029247.01.T01 AT1G61190 24.458 507 297 20 11 469 377 845 2.82e-13 73.2
MsG0580029247.01.T01 AT1G61190 24.458 507 297 20 11 469 377 845 2.82e-13 73.2
MsG0580029247.01.T01 AT1G61310 23.301 515 312 16 17 484 388 866 2.12e-12 70.5
MsG0580029247.01.T01 AT1G12220 28.139 231 148 8 19 236 271 496 3.22e-12 69.7
MsG0580029247.01.T01 AT1G12220 27.706 231 149 8 19 236 392 617 4.11e-12 69.7
MsG0580029247.01.T01 AT1G12220 27.706 231 149 8 19 236 392 617 4.11e-12 69.7
MsG0580029247.01.T01 AT1G63350 29.487 234 149 9 19 239 388 618 5.12e-12 69.3
MsG0580029247.01.T01 AT1G63350 29.487 234 149 9 19 239 388 618 5.46e-12 68.9
MsG0580029247.01.T01 AT1G63350 29.487 234 149 9 19 239 388 618 5.70e-12 68.9
MsG0580029247.01.T01 AT1G63350 29.487 234 149 9 19 239 388 618 5.70e-12 68.9
MsG0580029247.01.T01 AT1G61180 23.124 493 305 16 19 474 388 843 9.27e-12 68.6
MsG0580029247.01.T01 AT1G61180 23.124 493 305 16 19 474 388 843 9.64e-12 68.2
MsG0580029247.01.T01 AT5G63020 26.087 253 163 6 19 257 390 632 2.22e-11 67.0
MsG0580029247.01.T01 AT1G61300 25.099 506 288 21 11 469 265 726 3.40e-11 66.6
MsG0580029247.01.T01 AT1G61190 23.960 505 277 19 11 469 377 820 4.38e-11 66.2

Find 98 sgRNAs with CRISPR-Local

Find 121 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAACCATATTCCTAATAATT+TGG 0.103455 5:+94235741 MsG0580029247.01.T01:CDS
TATTTATTATATTAGATAAA+TGG 0.131317 5:-94235198 None:intergenic
GAACACATTGTTGGAACTTA+TGG 0.217461 5:-94235587 None:intergenic
TGTAACTCACCAACAGATTT+AGG 0.218518 5:-94235820 None:intergenic
AACCATATTCCTAATAATTT+GGG 0.229070 5:+94235742 MsG0580029247.01.T01:CDS
TCCCCAAATTATTAGGAATA+TGG 0.231890 5:-94235744 None:intergenic
TTTCGTGCTATTCATGGATT+TGG 0.238019 5:+94235631 MsG0580029247.01.T01:CDS
AAACAGAGATTTAGCAGATT+TGG 0.265449 5:-94236381 None:intergenic
TTTACAAGACACTCAAGTTT+TGG 0.267150 5:-94236300 None:intergenic
GCCAGCTTGTTTATTTCTCT+TGG 0.284138 5:-94235889 None:intergenic
AAAAGATTCCCCAAATTATT+AGG 0.285449 5:-94235751 None:intergenic
GTTGCATTGGGGATGATAAA+AGG 0.293811 5:-94236227 None:intergenic
TTTCAAAATCATACATGTTT+GGG 0.293862 5:-94236728 None:intergenic
ATTTCAAAATCATACATGTT+TGG 0.299291 5:-94236729 None:intergenic
CTCTTCTATTGCAGCACTTA+AGG 0.312967 5:-94236142 None:intergenic
GGAATTGATTCATAGAAGTT+TGG 0.325741 5:+94235399 MsG0580029247.01.T01:CDS
ATTTATTATATTAGATAAAT+GGG 0.328899 5:-94235197 None:intergenic
GTGCATTGTGTTCAAAATCT+AGG 0.355666 5:+94235683 MsG0580029247.01.T01:CDS
TTAAAGAAGATAAGGAAGTT+AGG 0.358927 5:+94236087 MsG0580029247.01.T01:CDS
ATTGCTCTTGAACACATTGT+TGG 0.368901 5:-94235596 None:intergenic
AGCCGTCTAGTTATTCCAAC+TGG 0.379433 5:-94235556 None:intergenic
GTGTAGTCTTGCCCTTTGTC+TGG 0.380230 5:-94236660 None:intergenic
ATGCATGGTTTCAAGTAGTA+TGG 0.380663 5:-94235247 None:intergenic
CAAGTCTTTCAGTGACTGTA+AGG 0.393478 5:-94236358 None:intergenic
GATTCATAGAAGTTTGGTTA+TGG 0.398562 5:+94235405 MsG0580029247.01.T01:CDS
GACGAATTCAGTTGGCATAT+CGG 0.399028 5:-94236625 None:intergenic
GTGTCAAGAGTTGGCTTTGA+AGG 0.420375 5:+94235427 MsG0580029247.01.T01:CDS
AATTGCGCAGGAGTATTTGT+TGG 0.434730 5:+94235378 MsG0580029247.01.T01:CDS
GACTACAAAAGTTGCCTGAC+TGG 0.435146 5:+94236274 MsG0580029247.01.T01:CDS
TTACTGAGGGAAGTGATCAT+TGG 0.438558 5:+94235478 MsG0580029247.01.T01:CDS
AGAGGGTACCTCCTTCAGTT+GGG 0.442629 5:-94236562 None:intergenic
CTCGGACGTTGAGTGAATAG+TGG 0.447996 5:-94236754 None:intergenic
CAGTGGCGAATGAATACAAT+AGG 0.449721 5:-94236699 None:intergenic
TTCCGTGCTCTCTTCTTACA+CGG 0.450264 5:-94236116 None:intergenic
GAAGACGCTGAAGTTGCATT+GGG 0.451202 5:-94236239 None:intergenic
TAAATCTGATGGGAGAACTT+TGG 0.453914 5:+94235351 MsG0580029247.01.T01:CDS
ATCTGCTAAATCTCTGTTTG+TGG 0.460154 5:+94236385 MsG0580029247.01.T01:CDS
GCTATTCATGGATTTGGAAA+AGG 0.465853 5:+94235637 MsG0580029247.01.T01:CDS
TTGTGGGACAATTGCTATCA+TGG 0.470389 5:+94236402 MsG0580029247.01.T01:CDS
CTATTGTATTCATTCGCCAC+TGG 0.484456 5:+94236700 MsG0580029247.01.T01:CDS
GTGTCTTGTAAAGTTAATGC+TGG 0.488175 5:+94236311 MsG0580029247.01.T01:CDS
TGAAGACGCTGAAGTTGCAT+TGG 0.489276 5:-94236240 None:intergenic
ATGGAGGGTTTCTAAAATTG+AGG 0.489556 5:+94236445 MsG0580029247.01.T01:CDS
TGAAAATGTTAAAGAAGATA+AGG 0.489795 5:+94236079 MsG0580029247.01.T01:CDS
TCTGCTAAATCTCTGTTTGT+GGG 0.493830 5:+94236386 MsG0580029247.01.T01:CDS
CTTAAGATACATAAACCTAA+GGG 0.495441 5:+94235777 MsG0580029247.01.T01:CDS
ATCTGATGGGAGAACTTTGG+AGG 0.499303 5:+94235354 MsG0580029247.01.T01:CDS
GCACTGATGAAAGGCTCCAT+TGG 0.499653 5:-94235664 None:intergenic
CTAGTTATTCCAACTGGGAG+AGG 0.500039 5:-94235550 None:intergenic
ACTTAAGATACATAAACCTA+AGG 0.508880 5:+94235776 MsG0580029247.01.T01:CDS
GATATTGAATCTCAGTCGCT+TGG 0.510665 5:+94236467 MsG0580029247.01.T01:CDS
GGGCATTACGTCTCAACTCC+AGG 0.515083 5:-94235177 None:intergenic
TCAAATTTCTTACGACTCCT+CGG 0.516793 5:-94236772 None:intergenic
TTGGTTATGGTGTCAAGAGT+TGG 0.520328 5:+94235418 MsG0580029247.01.T01:CDS
AACTTTGGAGGAAATTGCGC+AGG 0.522028 5:+94235366 MsG0580029247.01.T01:CDS
TCACTTCCCTCAGTAAATCA+TGG 0.522260 5:-94235471 None:intergenic
CGACTAATAGAGTAGTCCTC+TGG 0.522926 5:-94235289 None:intergenic
CAGAGGGTACCTCCTTCAGT+TGG 0.532670 5:-94236563 None:intergenic
AATATCCTTGAGTTTATGCA+TGG 0.535186 5:-94236595 None:intergenic
TTTATGTGGAGGTAGATCAT+GGG 0.544099 5:+94236034 MsG0580029247.01.T01:CDS
ACCAAGAGAAATAAACAAGC+TGG 0.545250 5:+94235888 MsG0580029247.01.T01:CDS
ATTCAACAATGGATAGCAGA+AGG 0.547399 5:+94235322 MsG0580029247.01.T01:CDS
TCCGTGCTCTCTTCTTACAC+GGG 0.551819 5:-94236115 None:intergenic
AAAGCATTGATCCAGACAAA+GGG 0.554945 5:+94236649 MsG0580029247.01.T01:CDS
ATTCATGGATTTGGAAAAGG+TGG 0.558934 5:+94235640 MsG0580029247.01.T01:CDS
GAACACAATGCACTGATGAA+AGG 0.560452 5:-94235673 None:intergenic
ATGGTTTCAAGTAGTATGGC+AGG 0.565462 5:-94235243 None:intergenic
GTATTCATTCGCCACTGGAA+CGG 0.565839 5:+94236705 MsG0580029247.01.T01:CDS
GTTGAGAAACCTCTCCCAGT+TGG 0.566699 5:+94235541 MsG0580029247.01.T01:CDS
ACATGTTTGGGCCGTTCCAG+TGG 0.570480 5:-94236716 None:intergenic
TGCATGGACTTGATGTCAGA+GGG 0.574695 5:-94236579 None:intergenic
AAAAGCATTGATCCAGACAA+AGG 0.578753 5:+94236648 MsG0580029247.01.T01:CDS
TAGTGATATTAAGATTTCCA+AGG 0.584437 5:-94236173 None:intergenic
ATTTGGAAAAGGTGGACCAA+TGG 0.586348 5:+94235648 MsG0580029247.01.T01:CDS
TCGGACGTTGAGTGAATAGT+GGG 0.590899 5:-94236753 None:intergenic
ACCATATTCCTAATAATTTG+GGG 0.597994 5:+94235743 MsG0580029247.01.T01:CDS
CAAGTCCATGCATAAACTCA+AGG 0.602783 5:+94236590 MsG0580029247.01.T01:CDS
CAGACACTTCCTAAATCTGT+TGG 0.602881 5:+94235811 MsG0580029247.01.T01:CDS
ATACTAAAATACAAAATGCA+TGG 0.605249 5:-94235262 None:intergenic
ATGCATGGACTTGATGTCAG+AGG 0.605679 5:-94236580 None:intergenic
TGTCTTGTAAAGTTAATGCT+GGG 0.610351 5:+94236312 MsG0580029247.01.T01:CDS
TTATGTGGAGGTAGATCATG+GGG 0.611196 5:+94236035 MsG0580029247.01.T01:CDS
GAGGGTACCTCCTTCAGTTG+GGG 0.617398 5:-94236561 None:intergenic
TTGAAGGTACTTGACATGCA+AGG 0.617415 5:+94235709 MsG0580029247.01.T01:CDS
CACTATTCACTCAACGTCCG+AGG 0.618555 5:+94236755 MsG0580029247.01.T01:CDS
GTCAAGTCCATGATTTACTG+AGG 0.621847 5:+94235464 MsG0580029247.01.T01:CDS
TCCCAGTTGGAATAACTAGA+CGG 0.624256 5:+94235554 MsG0580029247.01.T01:CDS
AAGTCTTTCAGTGACTGTAA+GGG 0.626148 5:-94236357 None:intergenic
AGACAAAGGGCAAGACTACA+CGG 0.628987 5:+94236662 MsG0580029247.01.T01:CDS
AGTTACAGTACGAAGCGAGA+AGG 0.631690 5:-94235924 None:intergenic
GCCGTCTAGTTATTCCAACT+GGG 0.638469 5:-94235555 None:intergenic
GTGAGAGATTAATTCAACAA+TGG 0.643602 5:+94235311 MsG0580029247.01.T01:CDS
ACCCGTGTAAGAAGAGAGCA+CGG 0.645463 5:+94236114 MsG0580029247.01.T01:CDS
TCAAGTCCATGATTTACTGA+GGG 0.646041 5:+94235465 MsG0580029247.01.T01:CDS
TTAAGATACATAAACCTAAG+GGG 0.667813 5:+94235778 MsG0580029247.01.T01:CDS
TAATATCACTACAATAACTG+AGG 0.680055 5:+94236185 MsG0580029247.01.T01:CDS
AAGACGCTGAAGTTGCATTG+GGG 0.728495 5:-94236238 None:intergenic
TATGTGGAGGTAGATCATGG+GGG 0.770299 5:+94236036 MsG0580029247.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACCATATTCCTAATAATTT+GGG + Chr5:94235742-94235761 MsG0580029247.01.T01:CDS 20.0%
!! ATACTAAAATACAAAATGCA+TGG - Chr5:94235265-94235284 None:intergenic 20.0%
!! ATTTCAAAATCATACATGTT+TGG - Chr5:94236732-94236751 None:intergenic 20.0%
!! TGAAAATGTTAAAGAAGATA+AGG + Chr5:94236079-94236098 MsG0580029247.01.T01:CDS 20.0%
!! TTTCAAAATCATACATGTTT+GGG - Chr5:94236731-94236750 None:intergenic 20.0%
!!! CACATAAAAGAAATTTTCTA+GGG - Chr5:94236022-94236041 None:intergenic 20.0%
! AAAAGATTCCCCAAATTATT+AGG - Chr5:94235754-94235773 None:intergenic 25.0%
! ACCATATTCCTAATAATTTG+GGG + Chr5:94235743-94235762 MsG0580029247.01.T01:CDS 25.0%
! ACTTAAGATACATAAACCTA+AGG + Chr5:94235776-94235795 MsG0580029247.01.T01:CDS 25.0%
! CTTAAGATACATAAACCTAA+GGG + Chr5:94235777-94235796 MsG0580029247.01.T01:CDS 25.0%
! GAACCATATTCCTAATAATT+TGG + Chr5:94235741-94235760 MsG0580029247.01.T01:CDS 25.0%
! TAATATCACTACAATAACTG+AGG + Chr5:94236185-94236204 MsG0580029247.01.T01:CDS 25.0%
! TAGTGATATTAAGATTTCCA+AGG - Chr5:94236176-94236195 None:intergenic 25.0%
! TTAAAGAAGATAAGGAAGTT+AGG + Chr5:94236087-94236106 MsG0580029247.01.T01:CDS 25.0%
! TTAAGATACATAAACCTAAG+GGG + Chr5:94235778-94235797 MsG0580029247.01.T01:CDS 25.0%
!! AGAAAATTTCTTTTATGTGG+AGG + Chr5:94236023-94236042 MsG0580029247.01.T01:CDS 25.0%
!! CCACATAAAAGAAATTTTCT+AGG - Chr5:94236023-94236042 None:intergenic 25.0%
!! CCTAGAAAATTTCTTTTATG+TGG + Chr5:94236020-94236039 MsG0580029247.01.T01:CDS 25.0%
!! GAAATTTTTCATTTTCAGCA+TGG + Chr5:94236426-94236445 MsG0580029247.01.T01:CDS 25.0%
!!! AAGGTTTTGTTAAATCTGAT+GGG + Chr5:94235341-94235360 MsG0580029247.01.T01:CDS 25.0%
!!! GTATTTTAGTATATATCCAG+AGG + Chr5:94235273-94235292 MsG0580029247.01.T01:CDS 25.0%
!!! TCTCTATTAAGTTTTAGAAC+TGG + Chr5:94235961-94235980 MsG0580029247.01.T01:intron 25.0%
!!! TTCAAAATCTAGGATTTTGA+AGG + Chr5:94235693-94235712 MsG0580029247.01.T01:CDS 25.0%
AAACAGAGATTTAGCAGATT+TGG - Chr5:94236384-94236403 None:intergenic 30.0%
AATATCCTTGAGTTTATGCA+TGG - Chr5:94236598-94236617 None:intergenic 30.0%
ATAGAAGAGATGAAAAACCT+TGG + Chr5:94236156-94236175 MsG0580029247.01.T01:CDS 30.0%
GATTCATAGAAGTTTGGTTA+TGG + Chr5:94235405-94235424 MsG0580029247.01.T01:CDS 30.0%
GTGAGAGATTAATTCAACAA+TGG + Chr5:94235311-94235330 MsG0580029247.01.T01:CDS 30.0%
TCCCCAAATTATTAGGAATA+TGG - Chr5:94235747-94235766 None:intergenic 30.0%
TGTCTTGTAAAGTTAATGCT+GGG + Chr5:94236312-94236331 MsG0580029247.01.T01:CDS 30.0%
! ATTTTTCATTTTCAGCATGG+AGG + Chr5:94236429-94236448 MsG0580029247.01.T01:CDS 30.0%
! GGAATTGATTCATAGAAGTT+TGG + Chr5:94235399-94235418 MsG0580029247.01.T01:CDS 30.0%
! TTTACAAGACACTCAAGTTT+TGG - Chr5:94236303-94236322 None:intergenic 30.0%
! TTTTTCATTTTCAGCATGGA+GGG + Chr5:94236430-94236449 MsG0580029247.01.T01:CDS 30.0%
!!! GAAGGTTTTGTTAAATCTGA+TGG + Chr5:94235340-94235359 MsG0580029247.01.T01:CDS 30.0%
AAGTCTTTCAGTGACTGTAA+GGG - Chr5:94236360-94236379 None:intergenic 35.0%
ACCAAGAGAAATAAACAAGC+TGG + Chr5:94235888-94235907 MsG0580029247.01.T01:CDS 35.0%
AGTGATCATTGGAAAAATGG+AGG + Chr5:94235489-94235508 MsG0580029247.01.T01:CDS 35.0%
ATCTGCTAAATCTCTGTTTG+TGG + Chr5:94236385-94236404 MsG0580029247.01.T01:CDS 35.0%
ATTCAACAATGGATAGCAGA+AGG + Chr5:94235322-94235341 MsG0580029247.01.T01:CDS 35.0%
ATTCATGGATTTGGAAAAGG+TGG + Chr5:94235640-94235659 MsG0580029247.01.T01:CDS 35.0%
ATTGCTCTTGAACACATTGT+TGG - Chr5:94235599-94235618 None:intergenic 35.0%
GAACACATTGTTGGAACTTA+TGG - Chr5:94235590-94235609 None:intergenic 35.0%
GCTATTCATGGATTTGGAAA+AGG + Chr5:94235637-94235656 MsG0580029247.01.T01:CDS 35.0%
GGAAGTGATCATTGGAAAAA+TGG + Chr5:94235486-94235505 MsG0580029247.01.T01:CDS 35.0%
GTGCATTGTGTTCAAAATCT+AGG + Chr5:94235683-94235702 MsG0580029247.01.T01:CDS 35.0%
GTGTCTTGTAAAGTTAATGC+TGG + Chr5:94236311-94236330 MsG0580029247.01.T01:CDS 35.0%
TAAATCTGATGGGAGAACTT+TGG + Chr5:94235351-94235370 MsG0580029247.01.T01:CDS 35.0%
TCAAGTCCATGATTTACTGA+GGG + Chr5:94235465-94235484 MsG0580029247.01.T01:CDS 35.0%
TCTGCTAAATCTCTGTTTGT+GGG + Chr5:94236386-94236405 MsG0580029247.01.T01:CDS 35.0%
TGAAAAAATTCCCCAACTGA+AGG + Chr5:94236551-94236570 MsG0580029247.01.T01:CDS 35.0%
TGTAACTCACCAACAGATTT+AGG - Chr5:94235823-94235842 None:intergenic 35.0%
TTTATGTGGAGGTAGATCAT+GGG + Chr5:94236034-94236053 MsG0580029247.01.T01:CDS 35.0%
! ATGCATGGTTTCAAGTAGTA+TGG - Chr5:94235250-94235269 None:intergenic 35.0%
! ATGCTTTTGACGAATTCAGT+TGG - Chr5:94236636-94236655 None:intergenic 35.0%
! TTTCGTGCTATTCATGGATT+TGG + Chr5:94235631-94235650 MsG0580029247.01.T01:CDS 35.0%
! TTTTATGTGGAGGTAGATCA+TGG + Chr5:94236033-94236052 MsG0580029247.01.T01:CDS 35.0%
!! AAAAGCATTGATCCAGACAA+AGG + Chr5:94236648-94236667 MsG0580029247.01.T01:CDS 35.0%
!! AAAGCATTGATCCAGACAAA+GGG + Chr5:94236649-94236668 MsG0580029247.01.T01:CDS 35.0%
!! ATGGAGGGTTTCTAAAATTG+AGG + Chr5:94236445-94236464 MsG0580029247.01.T01:CDS 35.0%
!! TCACATTTTCGTGCTATTCA+TGG + Chr5:94235625-94235644 MsG0580029247.01.T01:CDS 35.0%
AAAAATTCCCCAACTGAAGG+AGG + Chr5:94236554-94236573 MsG0580029247.01.T01:CDS 40.0%
ATTTGGAAAAGGTGGACCAA+TGG + Chr5:94235648-94235667 MsG0580029247.01.T01:CDS 40.0%
CAAGTCCATGCATAAACTCA+AGG + Chr5:94236590-94236609 MsG0580029247.01.T01:CDS 40.0%
CAAGTCTTTCAGTGACTGTA+AGG - Chr5:94236361-94236380 None:intergenic 40.0%
CAGACACTTCCTAAATCTGT+TGG + Chr5:94235811-94235830 MsG0580029247.01.T01:CDS 40.0%
CAGTGGCGAATGAATACAAT+AGG - Chr5:94236702-94236721 None:intergenic 40.0%
CTATTGTATTCATTCGCCAC+TGG + Chr5:94236700-94236719 MsG0580029247.01.T01:CDS 40.0%
CTCTTCTATTGCAGCACTTA+AGG - Chr5:94236145-94236164 None:intergenic 40.0%
GACGAATTCAGTTGGCATAT+CGG - Chr5:94236628-94236647 None:intergenic 40.0%
GATATTGAATCTCAGTCGCT+TGG + Chr5:94236467-94236486 MsG0580029247.01.T01:CDS 40.0%
GGTGAGTAAAAATCTGAACC+TGG + Chr5:94235159-94235178 MsG0580029247.01.T01:CDS 40.0%
GTCAAGTCCATGATTTACTG+AGG + Chr5:94235464-94235483 MsG0580029247.01.T01:CDS 40.0%
GTTGCATTGGGGATGATAAA+AGG - Chr5:94236230-94236249 None:intergenic 40.0%
TCACTTCCCTCAGTAAATCA+TGG - Chr5:94235474-94235493 None:intergenic 40.0%
TCCCAGTTGGAATAACTAGA+CGG + Chr5:94235554-94235573 MsG0580029247.01.T01:CDS 40.0%
TTACTGAGGGAAGTGATCAT+TGG + Chr5:94235478-94235497 MsG0580029247.01.T01:CDS 40.0%
TTATGTGGAGGTAGATCATG+GGG + Chr5:94236035-94236054 MsG0580029247.01.T01:CDS 40.0%
TTGTGGGACAATTGCTATCA+TGG + Chr5:94236402-94236421 MsG0580029247.01.T01:CDS 40.0%
! ACTGGTGTGCTGATGAAAAA+AGG + Chr5:94235979-94235998 MsG0580029247.01.T01:CDS 40.0%
! ATGGTTTCAAGTAGTATGGC+AGG - Chr5:94235246-94235265 None:intergenic 40.0%
! GAACACAATGCACTGATGAA+AGG - Chr5:94235676-94235695 None:intergenic 40.0%
! GCCAGCTTGTTTATTTCTCT+TGG - Chr5:94235892-94235911 None:intergenic 40.0%
! TCTGTACTTTTGTACCCCTT+AGG - Chr5:94235795-94235814 None:intergenic 40.0%
! TTGGTTATGGTGTCAAGAGT+TGG + Chr5:94235418-94235437 MsG0580029247.01.T01:CDS 40.0%
!! AATTGCGCAGGAGTATTTGT+TGG + Chr5:94235378-94235397 MsG0580029247.01.T01:CDS 40.0%
!! TTGAAGGTACTTGACATGCA+AGG + Chr5:94235709-94235728 MsG0580029247.01.T01:CDS 40.0%
!!! TCAAGTTTTGGAATCCAGTC+AGG - Chr5:94236291-94236310 None:intergenic 40.0%
AAGACGCTGAAGTTGCATTG+GGG - Chr5:94236241-94236260 None:intergenic 45.0%
AGACAAAGGGCAAGACTACA+CGG + Chr5:94236662-94236681 MsG0580029247.01.T01:CDS 45.0%
AGCCGTCTAGTTATTCCAAC+TGG - Chr5:94235559-94235578 None:intergenic 45.0%
AGTTACAGTACGAAGCGAGA+AGG - Chr5:94235927-94235946 None:intergenic 45.0%
ATCTGATGGGAGAACTTTGG+AGG + Chr5:94235354-94235373 MsG0580029247.01.T01:CDS 45.0%
ATGCATGGACTTGATGTCAG+AGG - Chr5:94236583-94236602 None:intergenic 45.0%
CGACTAATAGAGTAGTCCTC+TGG - Chr5:94235292-94235311 None:intergenic 45.0%
CTAGTTATTCCAACTGGGAG+AGG - Chr5:94235553-94235572 None:intergenic 45.0%
GAAGACGCTGAAGTTGCATT+GGG - Chr5:94236242-94236261 None:intergenic 45.0%
GACTACAAAAGTTGCCTGAC+TGG + Chr5:94236274-94236293 MsG0580029247.01.T01:CDS 45.0%
GCCGTCTAGTTATTCCAACT+GGG - Chr5:94235558-94235577 None:intergenic 45.0%
GTATTCATTCGCCACTGGAA+CGG + Chr5:94236705-94236724 MsG0580029247.01.T01:CDS 45.0%
TATGTGGAGGTAGATCATGG+GGG + Chr5:94236036-94236055 MsG0580029247.01.T01:CDS 45.0%
TCGGACGTTGAGTGAATAGT+GGG - Chr5:94236756-94236775 None:intergenic 45.0%
TGAAGACGCTGAAGTTGCAT+TGG - Chr5:94236243-94236262 None:intergenic 45.0%
TGCATGGACTTGATGTCAGA+GGG - Chr5:94236582-94236601 None:intergenic 45.0%
TTCCGTGCTCTCTTCTTACA+CGG - Chr5:94236119-94236138 None:intergenic 45.0%
! AACTTTGGAGGAAATTGCGC+AGG + Chr5:94235366-94235385 MsG0580029247.01.T01:CDS 45.0%
!! GTGTCAAGAGTTGGCTTTGA+AGG + Chr5:94235427-94235446 MsG0580029247.01.T01:CDS 45.0%
!! ATTTATTATATTAGATAAAT+GGG - Chr5:94235200-94235219 None:intergenic 5.0%
!! TATTTATTATATTAGATAAA+TGG - Chr5:94235201-94235220 None:intergenic 5.0%
ACCCGTGTAAGAAGAGAGCA+CGG + Chr5:94236114-94236133 MsG0580029247.01.T01:CDS 50.0%
CACTATTCACTCAACGTCCG+AGG + Chr5:94236755-94236774 MsG0580029247.01.T01:CDS 50.0%
CTCGGACGTTGAGTGAATAG+TGG - Chr5:94236757-94236776 None:intergenic 50.0%
GTTGAGAAACCTCTCCCAGT+TGG + Chr5:94235541-94235560 MsG0580029247.01.T01:CDS 50.0%
TCCGTGCTCTCTTCTTACAC+GGG - Chr5:94236118-94236137 None:intergenic 50.0%
! GCACTGATGAAAGGCTCCAT+TGG - Chr5:94235667-94235686 None:intergenic 50.0%
! GTGTAGTCTTGCCCTTTGTC+TGG - Chr5:94236663-94236682 None:intergenic 50.0%
!! AGAGGGTACCTCCTTCAGTT+GGG - Chr5:94236565-94236584 None:intergenic 50.0%
ACATGTTTGGGCCGTTCCAG+TGG - Chr5:94236719-94236738 None:intergenic 55.0%
GGGCATTACGTCTCAACTCC+AGG - Chr5:94235180-94235199 None:intergenic 55.0%
!! CAGAGGGTACCTCCTTCAGT+TGG - Chr5:94236566-94236585 None:intergenic 55.0%
!! GAGGGTACCTCCTTCAGTTG+GGG - Chr5:94236564-94236583 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
Chr5 gene 94235157 94236785 94235157 ID=MsG0580029247.01;Name=MsG0580029247.01
Chr5 mRNA 94235157 94236785 94235157 ID=MsG0580029247.01.T01;Parent=MsG0580029247.01;Name=MsG0580029247.01.T01;_AED=0.49;_eAED=0.49;_QI=0|0|0|1|0|0|2|0|530
Chr5 exon 94235157 94235935 94235157 ID=MsG0580029247.01.T01:exon:26748;Parent=MsG0580029247.01.T01
Chr5 exon 94235972 94236785 94235972 ID=MsG0580029247.01.T01:exon:26749;Parent=MsG0580029247.01.T01
Chr5 CDS 94235157 94235935 94235157 ID=MsG0580029247.01.T01:cds;Parent=MsG0580029247.01.T01
Chr5 CDS 94235972 94236785 94235972 ID=MsG0580029247.01.T01:cds;Parent=MsG0580029247.01.T01
Gene Sequence

>MsG0580029247.01.T01

ATGGTGAGTAAAAATCTGAACCTGGAGTTGAGACGTAATGCCCATTTATCTAATATAATAAATATTTTATCTCTTAGTTATGATGACCTGCCATACTACTTGAAACCATGCATTTTGTATTTTAGTATATATCCAGAGGACTACTCTATTAGTCGTGAGAGATTAATTCAACAATGGATAGCAGAAGGTTTTGTTAAATCTGATGGGAGAACTTTGGAGGAAATTGCGCAGGAGTATTTGTTGGAATTGATTCATAGAAGTTTGGTTATGGTGTCAAGAGTTGGCTTTGAAGGTAAAGTTAAAAGATGTCAAGTCCATGATTTACTGAGGGAAGTGATCATTGGAAAAATGGAGGATTTAAGTTTCTGTCATTTCATCGATGAAGTTGAGAAACCTCTCCCAGTTGGAATAACTAGACGGCTGTCTATTTCCATAAGTTCCAACAATGTGTTCAAGAGCAATAAGAACTCACATTTTCGTGCTATTCATGGATTTGGAAAAGGTGGACCAATGGAGCCTTTCATCAGTGCATTGTGTTCAAAATCTAGGATTTTGAAGGTACTTGACATGCAAGGCACATCAATGAACCATATTCCTAATAATTTGGGGAATCTTTTTCACTTAAGATACATAAACCTAAGGGGTACAAAAGTACAGACACTTCCTAAATCTGTTGGTGAGTTACATAACTTAGAGACACTGAATTTAAGAGAAACACTTGTGCATGAGATACCAAGAGAAATAAACAAGCTGGCAAAGCTAAGAAACCTTCTCGCTTCTTTTAGAACTGGTGTGCTGATGAAAAAAGGTATCAAAAAGTTGACTTCCCTAGAAAATTTCTTTTATGTGGAGGTAGATCATGGGGGAGTAGATCTCATTCAAGAAATGAAAATGTTAAAGAAGATAAGGAAGTTAGGTTTAACCCGTGTAAGAAGAGAGCACGGAAATGCCTTAAGTGCTGCAATAGAAGAGATGAAAAACCTTGGAAATCTTAATATCACTACAATAACTGAGGATGAAATCATTGACTTGAACCTTTTATCATCCCCAATGCAACTTCAGCGTCTTCATTTGAAAGCTAGACTACAAAAGTTGCCTGACTGGATTCCAAAACTTGAGTGTCTTGTAAAGTTAATGCTGGGTTTTTCTATGTTGAAAGATGATCCCTTACAGTCACTGAAAGACTTGCCAAATCTGCTAAATCTCTGTTTGTGGGACAATTGCTATCATGGTGAAATTTTTCATTTTCAGCATGGAGGGTTTCTAAAATTGAGGATATTGAATCTCAGTCGCTTGGAAAGAGTAAATTCAGTCGTTATAGATGATGAAACTTTGCTCTCTATTGAACATCTTACACTTGAAAAAATTCCCCAACTGAAGGAGGTACCCTCTGACATCAAGTCCATGCATAAACTCAAGGATATTTTCTTCACCGATATGCCAACTGAATTCGTCAAAAGCATTGATCCAGACAAAGGGCAAGACTACACGGTTATCAAGCACGTTCCTATTGTATTCATTCGCCACTGGAACGGCCCAAACATGTATGATTTTGAAATTCCCACTATTCACTCAACGTCCGAGGAGTCGTAA

Protein sequence

>MsG0580029247.01.T01

MVSKNLNLELRRNAHLSNIINILSLSYDDLPYYLKPCILYFSIYPEDYSISRERLIQQWIAEGFVKSDGRTLEEIAQEYLLELIHRSLVMVSRVGFEGKVKRCQVHDLLREVIIGKMEDLSFCHFIDEVEKPLPVGITRRLSISISSNNVFKSNKNSHFRAIHGFGKGGPMEPFISALCSKSRILKVLDMQGTSMNHIPNNLGNLFHLRYINLRGTKVQTLPKSVGELHNLETLNLRETLVHEIPREINKLAKLRNLLASFRTGVLMKKGIKKLTSLENFFYVEVDHGGVDLIQEMKMLKKIRKLGLTRVRREHGNALSAAIEEMKNLGNLNITTITEDEIIDLNLLSSPMQLQRLHLKARLQKLPDWIPKLECLVKLMLGFSMLKDDPLQSLKDLPNLLNLCLWDNCYHGEIFHFQHGGFLKLRILNLSRLERVNSVVIDDETLLSIEHLTLEKIPQLKEVPSDIKSMHKLKDIFFTDMPTEFVKSIDPDKGQDYTVIKHVPIVFIRHWNGPNMYDFEIPTIHSTSEES*