AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580030055.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580030055.01.T01 MTR_5g096820 91.447 760 20 1 1 715 1 760 0.0 1425
MsG0580030055.01.T01 MTR_5g096820 90.881 636 13 1 1 591 1 636 0.0 1189
MsG0580030055.01.T01 MTR_7g091880 56.082 781 266 6 1 715 1 770 0.0 897
MsG0580030055.01.T01 MTR_1g052515 57.447 752 271 3 1 715 1 740 0.0 890
MsG0580030055.01.T01 MTR_4g115330 51.757 740 291 8 1 705 76 784 0.0 769
MsG0580030055.01.T01 MTR_4g115330 54.464 672 258 7 69 705 1 659 0.0 751
MsG0580030055.01.T01 MTR_3g075510 46.371 744 348 7 1 699 1 738 0.0 694
MsG0580030055.01.T01 MTR_3g075510 46.445 633 292 5 1 591 1 628 0.0 604
MsG0580030055.01.T01 MTR_6g004880 38.008 763 400 12 7 711 35 782 9.61e-177 525
MsG0580030055.01.T01 MTR_4g105250 38.583 762 363 13 7 690 22 756 1.41e-172 514
MsG0580030055.01.T01 MTR_3g077280 38.058 762 383 12 7 697 28 771 5.26e-172 513
MsG0580030055.01.T01 MTR_5g065520 76.349 241 19 3 468 708 214 416 9.26e-110 339
MsG0580030055.01.T01 MTR_8g088020 39.729 443 241 8 268 700 398 824 3.45e-96 316
MsG0580030055.01.T01 MTR_8g088020 35.849 212 120 1 42 253 70 265 1.41e-40 160
MsG0580030055.01.T01 MTR_1g097450 39.180 439 249 6 268 694 402 834 4.23e-95 313
MsG0580030055.01.T01 MTR_1g097450 35.377 212 121 1 42 253 75 270 2.85e-39 156
MsG0580030055.01.T01 MTR_7g106910 38.717 452 246 7 268 702 407 844 1.52e-94 312
MsG0580030055.01.T01 MTR_7g106910 36.321 212 119 1 42 253 71 266 4.26e-40 158
MsG0580030055.01.T01 MTR_7g109790 36.416 346 199 6 367 702 9 343 1.52e-61 210
MsG0580030055.01.T01 MTR_7g055620 87.324 71 6 1 119 189 262 329 2.16e-32 129
MsG0580030055.01.T01 MTR_3g110050 76.812 69 16 0 636 704 1 69 1.21e-15 73.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580030055.01.T01 AT1G55740 67.368 760 194 5 1 713 1 753 0.0 1041
MsG0580030055.01.T01 AT3G57520 57.969 778 255 4 1 713 1 771 0.0 947
MsG0580030055.01.T01 AT3G57520 61.237 663 209 3 1 622 1 656 0.0 864
MsG0580030055.01.T01 AT5G20250 53.235 742 294 9 1 699 96 827 0.0 812
MsG0580030055.01.T01 AT5G20250 53.180 739 299 8 1 699 1 732 0.0 810
MsG0580030055.01.T01 AT5G20250 53.180 739 299 8 1 699 1 732 0.0 810
MsG0580030055.01.T01 AT5G20250 53.180 739 299 8 1 699 1 732 0.0 810
MsG0580030055.01.T01 AT3G57520 60.993 564 169 4 1 523 1 554 0.0 729
MsG0580030055.01.T01 AT5G40390 36.849 768 395 13 9 703 24 774 5.59e-169 504
MsG0580030055.01.T01 AT4G01970 39.150 447 251 9 268 697 416 858 8.56e-98 322
MsG0580030055.01.T01 AT4G01970 34.940 249 130 3 21 253 49 281 1.33e-40 160
MsG0580030055.01.T01 AT4G01970 39.150 447 251 9 268 697 463 905 2.03e-97 322
MsG0580030055.01.T01 AT4G01970 34.940 249 130 3 21 253 96 328 1.65e-40 160

Find 212 sgRNAs with CRISPR-Local

Find 401 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAGAGCTTCAGATGATTTC+TGG 0.146587 5:+105980611 MsG0580030055.01.T01:CDS
TCTCGGGATTTCATGGTAAT+TGG 0.169806 5:-105981681 None:intergenic
GGGACTCATTTGGTGTTTAT+TGG 0.178805 5:+105978975 MsG0580030055.01.T01:CDS
GAACATTTCTATTGATTTAT+AGG 0.181863 5:+105982001 MsG0580030055.01.T01:CDS
GGACTCATTTGGTGTTTATT+GGG 0.187135 5:+105978976 MsG0580030055.01.T01:CDS
TTAGATACCATTGCAATTAA+TGG 0.192004 5:+105980219 MsG0580030055.01.T01:CDS
CAATCCTTGGTTGGTCTTCC+TGG 0.200624 5:-105981185 None:intergenic
CATTCATGTTCCATATCTTT+AGG 0.258825 5:-105981338 None:intergenic
GTTCTTGTTACTCCTGCTTC+TGG 0.263308 5:+105978080 MsG0580030055.01.T01:CDS
AATCATTACCTGACATAAAT+AGG 0.266033 5:-105980885 None:intergenic
GTTTCTTTCTCATTTGCATT+TGG 0.276272 5:+105977884 MsG0580030055.01.T01:five_prime_UTR
TTGATCAATGGTGCATTTCT+TGG 0.278920 5:+105978110 MsG0580030055.01.T01:CDS
CGACAGTGGCAGATGATAAA+TGG 0.300808 5:+105981496 MsG0580030055.01.T01:CDS
GCACGCAATAACAGGATATT+GGG 0.318440 5:+105980095 MsG0580030055.01.T01:CDS
TTCATATTCTCGGGATTTCA+TGG 0.321029 5:-105981688 None:intergenic
GCACAGTCACTGACATCATT+AGG 0.326937 5:+105981451 MsG0580030055.01.T01:CDS
GGCGTCAAATTTGCGCCTAT+TGG 0.328230 5:+105981747 MsG0580030055.01.T01:CDS
CAGCAAATGATTCCGTTATC+AGG 0.329310 5:-105980438 None:intergenic
TTAATCAAGATGTTCAATTC+AGG 0.335147 5:+105981771 MsG0580030055.01.T01:CDS
CCAAACCAGTTCAACATATC+TGG 0.338607 5:-105979448 None:intergenic
TCTGGTGGTTCTTTGATCAA+TGG 0.352616 5:+105978098 MsG0580030055.01.T01:CDS
CATCTGCCACTGTCGATAAA+TGG 0.356356 5:-105981488 None:intergenic
GGCACGCAATAACAGGATAT+TGG 0.359380 5:+105980094 MsG0580030055.01.T01:CDS
CAGAATATCCTTGAAACTCT+TGG 0.359438 5:+105980339 MsG0580030055.01.T01:CDS
GGCGCAAATTTGACGCCATT+TGG 0.361215 5:-105981741 None:intergenic
ATATTAAGAGCTAAACTTCC+AGG 0.366671 5:+105981167 MsG0580030055.01.T01:CDS
GCTGTCAAAGAGTTCAGTTC+TGG 0.366906 5:+105981798 MsG0580030055.01.T01:CDS
TTTGCTTATTGAAGCACATA+AGG 0.367083 5:+105978624 MsG0580030055.01.T01:CDS
CATTTGGTGTTTATTGGGGC+TGG 0.372723 5:+105978981 MsG0580030055.01.T01:CDS
TGGAACATGAATGACTATTC+TGG 0.373902 5:+105981348 MsG0580030055.01.T01:CDS
TGGTGTTTCTTCTGATCAAA+AGG 0.383403 5:+105978130 MsG0580030055.01.T01:CDS
CTGGATTCTCGTCGTGGATA+AGG 0.394790 5:-105981428 None:intergenic
GCCACACCCGCGCACTTTCA+TGG 0.396420 5:-105981844 None:intergenic
CTAGCATCCGCTGGTATTGA+TGG 0.397699 5:+105980300 MsG0580030055.01.T01:CDS
CATTGATATAACTCTTTCTC+CGG 0.410663 5:-105981978 None:intergenic
CTTGATGGTGTTAGGGAAGA+AGG 0.410849 5:+105978034 MsG0580030055.01.T01:CDS
ATTGCAGTCTCCTAAAGATA+TGG 0.412765 5:+105981328 MsG0580030055.01.T01:intron
TTGACTCCAGGAGATGAGAT+AGG 0.414473 5:-105980174 None:intergenic
TGTTTCCATTCAACACCATT+GGG 0.415542 5:-105979710 None:intergenic
GTGAATTTATGCAGCCAGAT+TGG 0.418742 5:+105980698 MsG0580030055.01.T01:CDS
ATTTCTATTGATTTATAGGT+TGG 0.419729 5:+105982005 MsG0580030055.01.T01:exon
TGAATTTATGCAGCCAGATT+GGG 0.419847 5:+105980699 MsG0580030055.01.T01:CDS
AAAGTTGATTACTGCTGATT+CGG 0.420766 5:+105981896 MsG0580030055.01.T01:CDS
GCATTTGTTATGATTTCATA+AGG 0.421253 5:-105979011 None:intergenic
CCAGATATGTTGAACTGGTT+TGG 0.421533 5:+105979448 MsG0580030055.01.T01:CDS
GCTTTCCCTATCTCATCTCC+TGG 0.423799 5:+105980168 MsG0580030055.01.T01:CDS
ATTGGAATAGAAACATCCTT+TGG 0.425085 5:-105981663 None:intergenic
ATTCAGTTACGAGGAAGAAT+CGG 0.425977 5:+105981929 MsG0580030055.01.T01:CDS
GATGGAAACTTGATGGTGTT+AGG 0.426147 5:+105978026 MsG0580030055.01.T01:CDS
GATTTCAGGGCTGTTCTTCA+AGG 0.428389 5:+105978733 MsG0580030055.01.T01:CDS
TAATTCCGTCACAGGGACTA+TGG 0.429944 5:-105981718 None:intergenic
GGAATTTGATGGGACTCATT+TGG 0.432327 5:+105978965 MsG0580030055.01.T01:CDS
TAATGCTTCATCTGGTTGGT+TGG 0.433017 5:-105980199 None:intergenic
AGGGAAGAAGGTTCTGAGTC+AGG 0.435038 5:+105978046 MsG0580030055.01.T01:CDS
TTGATGCAGTTCAAAGCGTT+CGG 0.437922 5:+105980582 MsG0580030055.01.T01:intron
TCCATGAAAGTGCGCGGGTG+TGG 0.441350 5:+105981843 MsG0580030055.01.T01:CDS
CACAGTCACTGACATCATTA+GGG 0.443981 5:+105981452 MsG0580030055.01.T01:CDS
TACCTCTTTCCATCTCTAGC+AGG 0.444123 5:-105981221 None:intergenic
AGGTTTGATGAGGGAGGGGA+AGG 0.452298 5:-105977849 None:intergenic
AACATCTTGATTAAACCAAT+AGG 0.453912 5:-105981762 None:intergenic
AATGACTATTCTGGAGTTGT+TGG 0.457081 5:+105981357 MsG0580030055.01.T01:CDS
TATGTGTGGCACGCAATAAC+AGG 0.457665 5:+105980087 MsG0580030055.01.T01:CDS
ATGACTATTCTGGAGTTGTT+GGG 0.459794 5:+105981358 MsG0580030055.01.T01:CDS
CTTAAAACATACCACAAAGA+TGG 0.460266 5:-105981542 None:intergenic
AGATGCCAGATATGTTGAAC+TGG 0.461398 5:+105979443 MsG0580030055.01.T01:intron
ATGTGAATTGTGTGAGATGC+AGG 0.463395 5:-105980643 None:intergenic
GGTGTTAAACCTGGGATTAG+TGG 0.464175 5:+105980120 MsG0580030055.01.T01:CDS
GGTTGGTTGGACTTGACTCC+AGG 0.465627 5:-105980186 None:intergenic
ATGAATCACAGAACAGAGAA+AGG 0.466293 5:-105977936 None:intergenic
TGTTGCTGATGGAAACTTGA+TGG 0.470783 5:+105978019 MsG0580030055.01.T01:CDS
ATGTTTCCATTCAACACCAT+TGG 0.474051 5:-105979711 None:intergenic
CTTATCCACGACGAGAATCC+AGG 0.474066 5:+105981429 MsG0580030055.01.T01:CDS
TTTCAAGAAAAGATGACTGT+AGG 0.474623 5:+105977984 MsG0580030055.01.T01:exon
AGTCGCAGAGTCTTTCCTAT+TGG 0.476411 5:+105978155 MsG0580030055.01.T01:CDS
AGATTGAAGTCGTGGTGTCC+AGG 0.477295 5:-105981113 None:intergenic
CTGAAATCTCCTTCCAAAAG+AGG 0.477676 5:-105978718 None:intergenic
TTCAAGAAAAGATGACTGTA+GGG 0.477683 5:+105977985 MsG0580030055.01.T01:exon
TTCAGTTACGAGGAAGAATC+GGG 0.479971 5:+105981930 MsG0580030055.01.T01:CDS
ATGATGTCAGTGACTGTGCC+TGG 0.481533 5:-105981447 None:intergenic
CCATCAAATTCCTCCACATC+AGG 0.481977 5:-105978954 None:intergenic
ACAATACAGACGGATTGTAT+AGG 0.482731 5:+105980469 MsG0580030055.01.T01:CDS
ACATGAAACATATCCCAATC+TGG 0.482945 5:-105980712 None:intergenic
GAAGGTGTGAGGTTTGATGA+GGG 0.484150 5:-105977858 None:intergenic
ATGGTATCTAATGCTTCATC+TGG 0.485206 5:-105980207 None:intergenic
ACATACTCAAGCTTGCCAAT+AGG 0.485952 5:-105978170 None:intergenic
GGAGCTGGTTGGTGCAAAGT+TGG 0.487373 5:+105981396 MsG0580030055.01.T01:CDS
ATCAGAAAATAAGCAATCCT+TGG 0.487411 5:-105981198 None:intergenic
CATGCTGCTGCAAGAGCAGT+TGG 0.488415 5:+105980855 MsG0580030055.01.T01:CDS
GAGGATGTCCTATTTATGTC+AGG 0.491039 5:+105980877 MsG0580030055.01.T01:CDS
TGTGAGGTTTGATGAGGGAG+GGG 0.494444 5:-105977853 None:intergenic
CCTGATGTGGAGGAATTTGA+TGG 0.498094 5:+105978954 MsG0580030055.01.T01:CDS
TATCTAATGCTTCATCTGGT+TGG 0.499999 5:-105980203 None:intergenic
CATTGGAGGCATCGATCTCT+AGG 0.501698 5:+105980409 MsG0580030055.01.T01:CDS
AAGTTTGTCATAATTGATGA+TGG 0.501793 5:+105979665 MsG0580030055.01.T01:CDS
TCTAGGAACTTTCCTGATAA+CGG 0.503841 5:+105980426 MsG0580030055.01.T01:CDS
AGAAGGTGTGAGGTTTGATG+AGG 0.506317 5:-105977859 None:intergenic
ATCCTTGAAACTCTTGGAGC+AGG 0.507848 5:+105980345 MsG0580030055.01.T01:CDS
CCGCGTAGGTAGAACCATCT+TGG 0.508362 5:-105978687 None:intergenic
CCATTTGGTAATTCCGTCAC+AGG 0.508864 5:-105981726 None:intergenic
ACTGGTTTGGATGGTGTACA+TGG 0.510270 5:+105979461 MsG0580030055.01.T01:CDS
GATATTGACGGAGGGGTTGA+CGG 0.510761 5:+105978652 MsG0580030055.01.T01:CDS
GACTCATTTGGTGTTTATTG+GGG 0.511611 5:+105978977 MsG0580030055.01.T01:CDS
GTGTGAGATGCAGGGTCTCT+TGG 0.512827 5:-105980634 None:intergenic
GAATCAGCAGTAATCAACTT+TGG 0.513800 5:-105981894 None:intergenic
GCTCTTAATATAGAACCGTC+AGG 0.513998 5:-105981155 None:intergenic
ATCAAAGAACCACCAGAAGC+AGG 0.518612 5:-105978092 None:intergenic
ACTTGCAAGGAAATATCATC+AGG 0.521049 5:+105980386 MsG0580030055.01.T01:CDS
TCAATTATGACAAACTTAGC+AGG 0.522019 5:-105979659 None:intergenic
ACCATTGCAATTAATGGACT+CGG 0.524368 5:+105980225 MsG0580030055.01.T01:CDS
GTATTCAATTGTCAAGGAGC+TGG 0.525702 5:+105981381 MsG0580030055.01.T01:CDS
CTTGTTACTCCTGCTTCTGG+TGG 0.525865 5:+105978083 MsG0580030055.01.T01:CDS
CTGATGAATAAGCACCGAAA+AGG 0.528725 5:-105981866 None:intergenic
GAAAATAAGCAATCCTTGGT+TGG 0.534266 5:-105981194 None:intergenic
TTAAAACATACCACAAAGAT+GGG 0.534469 5:-105981541 None:intergenic
TTGTCATCGCGAGAGAAAGA+AGG 0.535948 5:+105979313 MsG0580030055.01.T01:CDS
ATGGAAACTTGATGGTGTTA+GGG 0.536276 5:+105978027 MsG0580030055.01.T01:CDS
TATTGGGGTGGTGTTAAACC+TGG 0.537243 5:+105980111 MsG0580030055.01.T01:CDS
GATTACTGCTGATTCGGAAG+AGG 0.537885 5:+105981902 MsG0580030055.01.T01:CDS
CACTCATATCTAGCATCCGC+TGG 0.540430 5:+105980291 MsG0580030055.01.T01:CDS
ATCAAGATGTTCAATTCAGG+AGG 0.543626 5:+105981774 MsG0580030055.01.T01:CDS
GTGTGAGGTTTGATGAGGGA+GGG 0.543672 5:-105977854 None:intergenic
TGTTCCATGCCACTAATCCC+AGG 0.544946 5:-105980129 None:intergenic
GGTGTGAGGTTTGATGAGGG+AGG 0.545508 5:-105977855 None:intergenic
TACTGCTGATTCGGAAGAGG+TGG 0.546336 5:+105981905 MsG0580030055.01.T01:CDS
CACATTCTCTGAAGTGACGT+TGG 0.546510 5:-105979497 None:intergenic
GTCCTGCTCCAAGAGTTTCA+AGG 0.548641 5:-105980347 None:intergenic
ACAAAGATGGGAAAATATGA+TGG 0.552357 5:-105981529 None:intergenic
GAAACTCTTGGAGCAGGACA+TGG 0.552642 5:+105980351 MsG0580030055.01.T01:CDS
TTGCTTATTGAAGCACATAA+GGG 0.552730 5:+105978625 MsG0580030055.01.T01:CDS
TGAATCACAGAACAGAGAAA+GGG 0.553461 5:-105977935 None:intergenic
GTGGCAGATGATAAATGGAC+AGG 0.554459 5:+105981501 MsG0580030055.01.T01:CDS
ATTTCAGGGCTGTTCTTCAA+GGG 0.556814 5:+105978734 MsG0580030055.01.T01:CDS
TGGAGCAGGACATGGTGGGA+GGG 0.557166 5:+105980359 MsG0580030055.01.T01:CDS
TGGACCCCAATGGTGTTGAA+TGG 0.557644 5:+105979705 MsG0580030055.01.T01:CDS
GGTGTTTCTTCTGATCAAAA+GGG 0.558333 5:+105978131 MsG0580030055.01.T01:CDS
GAAATATCATCAGGCATTGG+AGG 0.559741 5:+105980395 MsG0580030055.01.T01:CDS
GAAAAGATGACTGTAGGGGC+AGG 0.561229 5:+105977990 MsG0580030055.01.T01:exon
TTGGAGCAGGACATGGTGGG+AGG 0.562696 5:+105980358 MsG0580030055.01.T01:CDS
GTGGTGGATGACTCAGAGAA+TGG 0.563083 5:+105978564 MsG0580030055.01.T01:CDS
GCCGAGTCCATTAATTGCAA+TGG 0.564685 5:-105980226 None:intergenic
ACTTCAGAGAATGTGAAAGA+AGG 0.566901 5:+105979505 MsG0580030055.01.T01:CDS
GCAGGAATATCTGTTGCTGA+TGG 0.567325 5:+105978008 MsG0580030055.01.T01:CDS
AAGAAGCTTGTACTTCCTGA+CGG 0.570895 5:+105981140 MsG0580030055.01.T01:CDS
CCTGTGACGGAATTACCAAA+TGG 0.577974 5:+105981726 MsG0580030055.01.T01:CDS
GTTGGGGTATTCAATTGTCA+AGG 0.578349 5:+105981375 MsG0580030055.01.T01:CDS
GGAACAAAGAGCATTGCTGA+AGG 0.578391 5:+105977905 MsG0580030055.01.T01:five_prime_UTR
TGACTCCAGGAGATGAGATA+GGG 0.578809 5:-105980173 None:intergenic
TTTATAGGCATGTGTATGTG+TGG 0.579591 5:+105980073 MsG0580030055.01.T01:intron
GGAACATTATGAGTCAAAGA+TGG 0.580896 5:+105980146 MsG0580030055.01.T01:CDS
ATTTCAGAGTCTTCATCCGA+TGG 0.583061 5:+105980824 MsG0580030055.01.T01:intron
ATATGTTGAACTGGTTTGGA+TGG 0.583851 5:+105979452 MsG0580030055.01.T01:CDS
ATTGAGATTTGTGTCGAAAG+TGG 0.584978 5:+105978772 MsG0580030055.01.T01:CDS
CGGAGAAAGAGTTATATCAA+TGG 0.585923 5:+105981979 MsG0580030055.01.T01:CDS
TTACGAGGAAGAATCGGGAT+TGG 0.588683 5:+105981935 MsG0580030055.01.T01:CDS
GGTTTGATGAGGGAGGGGAA+GGG 0.588767 5:-105977848 None:intergenic
TTGTCATAATTGATGATGGA+TGG 0.588951 5:+105979669 MsG0580030055.01.T01:CDS
GCAGCATGATATTCAGCCAT+CGG 0.591613 5:-105980840 None:intergenic
GACTATCAATTTGAGTGTGC+CGG 0.594245 5:+105981959 MsG0580030055.01.T01:CDS
CATAAGGGTCGTGATATTGA+CGG 0.598066 5:+105978640 MsG0580030055.01.T01:CDS
TCTTCAAAAGATTGAAGTCG+TGG 0.598479 5:-105981121 None:intergenic
ATGTTTCCATGAAAGTGCGC+GGG 0.602450 5:+105981838 MsG0580030055.01.T01:CDS
GAACAAAGAGCATTGCTGAA+GGG 0.603346 5:+105977906 MsG0580030055.01.T01:five_prime_UTR
TCAATTGTCAAGGAGCTGGT+TGG 0.603577 5:+105981385 MsG0580030055.01.T01:CDS
TCACACAATTCACATTGCAT+CGG 0.606593 5:+105980651 MsG0580030055.01.T01:CDS
TAAACCTGGGATTAGTGGCA+TGG 0.606597 5:+105980125 MsG0580030055.01.T01:CDS
AAAGAAACAGAGAAGGTGTG+AGG 0.608001 5:-105977869 None:intergenic
TGACTATTCTGGAGTTGTTG+GGG 0.608376 5:+105981359 MsG0580030055.01.T01:CDS
CTGTGCCTGGATTCTCGTCG+TGG 0.608941 5:-105981434 None:intergenic
ATCCTGCTAGAGATGGAAAG+AGG 0.609009 5:+105981219 MsG0580030055.01.T01:CDS
ATTGGGGTGGTGTTAAACCT+GGG 0.617867 5:+105980112 MsG0580030055.01.T01:CDS
TCAAGATGTTCAATTCAGGA+GGG 0.618888 5:+105981775 MsG0580030055.01.T01:CDS
ATGTTGTGTAGCGACAAGCC+TGG 0.619947 5:+105981095 MsG0580030055.01.T01:intron
ACTCTTGGAGCAGGACATGG+TGG 0.623127 5:+105980354 MsG0580030055.01.T01:CDS
GCTGCTGCAAGAGCAGTTGG+AGG 0.623143 5:+105980858 MsG0580030055.01.T01:CDS
TGGTGGATGACTCAGAGAAT+GGG 0.624213 5:+105978565 MsG0580030055.01.T01:CDS
CAAGATGTTCAATTCAGGAG+GGG 0.626666 5:+105981776 MsG0580030055.01.T01:CDS
TGAATTAGTCTATCTTCCAA+AGG 0.628210 5:+105981647 MsG0580030055.01.T01:CDS
TCTGTTAGCATGGACCCCAA+TGG 0.628808 5:+105979695 MsG0580030055.01.T01:CDS
TGGATGGCAATCTGTTAGCA+TGG 0.629189 5:+105979685 MsG0580030055.01.T01:CDS
AGGGTCGTGATATTGACGGA+GGG 0.630237 5:+105978644 MsG0580030055.01.T01:CDS
CTCTTGGAGCAGGACATGGT+GGG 0.631869 5:+105980355 MsG0580030055.01.T01:CDS
AAGGAAATATCATCAGGCAT+TGG 0.632296 5:+105980392 MsG0580030055.01.T01:CDS
GTGGGAGGGTGAAACTTGCA+AGG 0.634046 5:+105980373 MsG0580030055.01.T01:CDS
GTTTCCATTCAACACCATTG+GGG 0.635207 5:-105979709 None:intergenic
TCAAGAAAAGATGACTGTAG+GGG 0.642324 5:+105977986 MsG0580030055.01.T01:exon
AATTCAAAAGGTTTCAACAG+TGG 0.643037 5:-105977962 None:intergenic
CAGCGGATGCTAGATATGAG+TGG 0.644150 5:-105980290 None:intergenic
CTGATGTGGAGGAATTTGAT+GGG 0.644921 5:+105978955 MsG0580030055.01.T01:CDS
ATGTGAAAGAAGGATTACAA+AGG 0.646563 5:+105979515 MsG0580030055.01.T01:CDS
AAACTTTCTCAGGATTCACA+AGG 0.647279 5:-105980248 None:intergenic
TGCATGAGTCACAATACAGA+CGG 0.648732 5:+105980459 MsG0580030055.01.T01:CDS
CATTTGGTAATTCCGTCACA+GGG 0.654139 5:-105981725 None:intergenic
AAATGAGAAAGAAACAGAGA+AGG 0.660930 5:-105977876 None:intergenic
ACTCAGAGAATGGGTAACTG+TGG 0.666426 5:+105978574 MsG0580030055.01.T01:CDS
GATTGTAGGATGTCCTGATG+TGG 0.668084 5:+105978941 MsG0580030055.01.T01:intron
CACGCAATAACAGGATATTG+GGG 0.669516 5:+105980096 MsG0580030055.01.T01:CDS
GGTGGAGAAGAAGACCAAGA+TGG 0.672715 5:+105978673 MsG0580030055.01.T01:CDS
AAGAGGTAACAAAACCGCGT+AGG 0.674435 5:-105978701 None:intergenic
GGGTCGTGATATTGACGGAG+GGG 0.674757 5:+105978645 MsG0580030055.01.T01:CDS
ATTGACGGAGGGGTTGACGG+TGG 0.676503 5:+105978655 MsG0580030055.01.T01:CDS
CCAAGATGGTTCTACCTACG+CGG 0.679355 5:+105978687 MsG0580030055.01.T01:CDS
ACTTCCAGGAAGACCAACCA+AGG 0.682213 5:+105981181 MsG0580030055.01.T01:CDS
CTGGTTTGGATGGTGTACAT+GGG 0.686671 5:+105979462 MsG0580030055.01.T01:CDS
TGTAGGATGTCCTGATGTGG+AGG 0.686980 5:+105978944 MsG0580030055.01.T01:intron
AAGGGTCGTGATATTGACGG+AGG 0.687446 5:+105978643 MsG0580030055.01.T01:CDS
TGTGAATTGTGTGAGATGCA+GGG 0.690378 5:-105980642 None:intergenic
AATGTTTCCATGAAAGTGCG+CGG 0.690958 5:+105981837 MsG0580030055.01.T01:CDS
TATCGACCATTTATCGACAG+TGG 0.693571 5:+105981482 MsG0580030055.01.T01:CDS
CTGGCTGCATAAATTCACCA+AGG 0.700322 5:-105980693 None:intergenic
GCAATAACAGGATATTGGGG+TGG 0.700706 5:+105980099 MsG0580030055.01.T01:CDS
AGAGGTGGAATTCAGTTACG+AGG 0.721190 5:+105981920 MsG0580030055.01.T01:CDS
TTTGACACCATCAATACCAG+CGG 0.721207 5:-105980307 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTAACAAAAAAAGATTTA+AGG - Chr5:105981024-105981043 None:intergenic 10.0%
!!! TCAAATTTTTACTTTAAAAA+TGG - Chr5:105979357-105979376 None:intergenic 10.0%
!!! TTTATTATGTTTTTGTTTTA+GGG + Chr5:105978507-105978526 MsG0580030055.01.T01:intron 10.0%
!!! TTTTATTATGTTTTTGTTTT+AGG + Chr5:105978506-105978525 MsG0580030055.01.T01:intron 10.0%
!!! TTTTTAAAGTAAAAATTTGA+TGG + Chr5:105979357-105979376 MsG0580030055.01.T01:intron 10.0%
!! CAATTATATAGAAGAAAAAT+TGG - Chr5:105981598-105981617 None:intergenic 15.0%
!!! TAATACCATATTAATTTGAA+TGG + Chr5:105983013-105983032 MsG0580030055.01.T01:intron 15.0%
!!! TTATTATGTTTTTGTTTTAG+GGG + Chr5:105978508-105978527 MsG0580030055.01.T01:intron 15.0%
!! AAATGAATGAATGAATATGT+TGG + Chr5:105982111-105982130 MsG0580030055.01.T01:intron 20.0%
!! AACTAGTAAGTGTTTATATA+TGG + Chr5:105982236-105982255 MsG0580030055.01.T01:intron 20.0%
!! AATAAACATCAAAAACCAAA+AGG - Chr5:105978440-105978459 None:intergenic 20.0%
!! ACTAGTAAGTGTTTATATAT+GGG + Chr5:105982237-105982256 MsG0580030055.01.T01:intron 20.0%
!! AGTTAAAAGAGAATAACTTA+TGG - Chr5:105980916-105980935 None:intergenic 20.0%
!! ATAAACATCAAAAACCAAAA+GGG - Chr5:105978439-105978458 None:intergenic 20.0%
!! ATATATAAACACTTACTAGT+TGG - Chr5:105982237-105982256 None:intergenic 20.0%
!! ATATATTTGACAATGAAAGT+TGG - Chr5:105979767-105979786 None:intergenic 20.0%
!! GAAATTCAAATTTAACAGTT+TGG + Chr5:105983267-105983286 MsG0580030055.01.T01:intron 20.0%
!! GTAAAACACAAAAATATTAG+AGG - Chr5:105979408-105979427 None:intergenic 20.0%
!! GTATTATTACCATTCTATTA+TGG - Chr5:105982951-105982970 None:intergenic 20.0%
!! GTATTATTAGCATTCTATTA+TGG - Chr5:105982999-105983018 None:intergenic 20.0%
!! TATATAAACACTTACTAGTT+GGG - Chr5:105982236-105982255 None:intergenic 20.0%
!! TATATTTGACAATGAAAGTT+GGG - Chr5:105979766-105979785 None:intergenic 20.0%
!! TCATGTAAGTTGTTAAATAT+AGG + Chr5:105980729-105980748 MsG0580030055.01.T01:intron 20.0%
!! TCTAGATTTATTCAATAACA+AGG + Chr5:105980538-105980557 MsG0580030055.01.T01:intron 20.0%
!! TCTATGAACCAAAATATATT+AGG - Chr5:105980757-105980776 None:intergenic 20.0%
!! TGAAACCATTCAAATTAATA+TGG - Chr5:105983021-105983040 None:intergenic 20.0%
!! TGAACAAAGAAAAAAATTGA+TGG - Chr5:105979265-105979284 None:intergenic 20.0%
!! TTAATTCTAGTGAAGAAAAT+TGG + Chr5:105982142-105982161 MsG0580030055.01.T01:intron 20.0%
!!! AAGAAAATGTTTGTATTTTC+TGG + Chr5:105982064-105982083 MsG0580030055.01.T01:three_prime_UTR 20.0%
!!! ATCAATTTTTTTCTTTGTTC+AGG + Chr5:105979264-105979283 MsG0580030055.01.T01:intron 20.0%
!!! ATTTCTATTGATTTATAGGT+TGG + Chr5:105982005-105982024 MsG0580030055.01.T01:exon 20.0%
!!! ATTTTCTATTTAAGGAGAAA+TGG + Chr5:105982835-105982854 MsG0580030055.01.T01:intron 20.0%
!!! CATGTTTTTTTTGATTTCAT+TGG - Chr5:105979961-105979980 None:intergenic 20.0%
!!! GAACATTTCTATTGATTTAT+AGG + Chr5:105982001-105982020 MsG0580030055.01.T01:CDS 20.0%
!!! TAATACCATATTAATTTGAG+TGG + Chr5:105982965-105982984 MsG0580030055.01.T01:intron 20.0%
!!! TATAGGATCCTAATATATTT+TGG + Chr5:105980746-105980765 MsG0580030055.01.T01:intron 20.0%
!!! TATTATGTTTTTGTTTTAGG+GGG + Chr5:105978509-105978528 MsG0580030055.01.T01:intron 20.0%
!!! TCTTTTCTTGAAAATTCAAA+AGG - Chr5:105977977-105977996 None:intergenic 20.0%
! AACATCTTGATTAAACCAAT+AGG - Chr5:105981765-105981784 None:intergenic 25.0%
! AAGTTTGTCATAATTGATGA+TGG + Chr5:105979665-105979684 MsG0580030055.01.T01:CDS 25.0%
! AATCATTACCTGACATAAAT+AGG - Chr5:105980888-105980907 None:intergenic 25.0%
! ATATAAACACTTACTAGTTG+GGG - Chr5:105982235-105982254 None:intergenic 25.0%
! ATGGTTTCAATATTAAAGAG+TGG + Chr5:105983032-105983051 MsG0580030055.01.T01:intron 25.0%
! CTATCATCATGATAAAAACA+TGG + Chr5:105978347-105978366 MsG0580030055.01.T01:intron 25.0%
! GAAGAATCATATATTATCGA+AGG - Chr5:105982716-105982735 None:intergenic 25.0%
! TAAAAGTGAAAAACTTTCTC+AGG - Chr5:105980261-105980280 None:intergenic 25.0%
! TAAACATCAAAAACCAAAAG+GGG - Chr5:105978438-105978457 None:intergenic 25.0%
! TCACACAAAAAACATACAAA+AGG - Chr5:105978306-105978325 None:intergenic 25.0%
! TGGTAAAAACTTCATATTCT+CGG - Chr5:105981701-105981720 None:intergenic 25.0%
! TTAAAACATACCACAAAGAT+GGG - Chr5:105981544-105981563 None:intergenic 25.0%
! TTAATCAAGATGTTCAATTC+AGG + Chr5:105981771-105981790 MsG0580030055.01.T01:CDS 25.0%
! TTAGATACCATTGCAATTAA+TGG + Chr5:105980219-105980238 MsG0580030055.01.T01:CDS 25.0%
! TTATCTATTTCCACTAAAAG+TGG + Chr5:105979540-105979559 MsG0580030055.01.T01:intron 25.0%
! TTCGACATTGTAAAAATGTA+TGG - Chr5:105979797-105979816 None:intergenic 25.0%
! TTTGCAAGTGTTAATATTGA+AGG + Chr5:105978463-105978482 MsG0580030055.01.T01:intron 25.0%
! TTTGTCAAGTAAGTAAAGTT+AGG - Chr5:105981270-105981289 None:intergenic 25.0%
!! AAAATTGGTGTAACCTTTTT+AGG - Chr5:105981583-105981602 None:intergenic 25.0%
!! AAAGAATTTCATTGAGTTGT+CGG + Chr5:105982565-105982584 MsG0580030055.01.T01:intron 25.0%
!! CAACTCAATGAAATTCTTTT+CGG - Chr5:105982564-105982583 None:intergenic 25.0%
!! TATCACAATCTTTTCTATCA+AGG + Chr5:105983309-105983328 MsG0580030055.01.T01:three_prime_UTR 25.0%
!! TTACGTTATTTACAGTTTTG+AGG + Chr5:105979625-105979644 MsG0580030055.01.T01:intron 25.0%
!!! GCATTTGTTATGATTTCATA+AGG - Chr5:105979014-105979033 None:intergenic 25.0%
!!! TATGTAATTGTTTGTTGTCT+TGG + Chr5:105980946-105980965 MsG0580030055.01.T01:intron 25.0%
!!! TCTGAGTTTTTTCAATTACT+AGG + Chr5:105979082-105979101 MsG0580030055.01.T01:intron 25.0%
!!! TGTTTTTTGTGTGTGTAAAT+CGG + Chr5:105978820-105978839 MsG0580030055.01.T01:intron 25.0%
!!! TTGTGATATTCTGTTGTTTT+TGG - Chr5:105983297-105983316 None:intergenic 25.0%
!!! TTTTCGTCGTTTTTGTTTAT+AGG + Chr5:105980058-105980077 MsG0580030055.01.T01:intron 25.0%
AAACGACGAAAAATTTGCAA+CGG - Chr5:105980050-105980069 None:intergenic 30.0%
AAAGTTCATCACTGCAAATT+AGG - Chr5:105979209-105979228 None:intergenic 30.0%
AAATGAGAAAGAAACAGAGA+AGG - Chr5:105977879-105977898 None:intergenic 30.0%
AAGTCCTAATACTGAACTAA+TGG - Chr5:105979158-105979177 None:intergenic 30.0%
AATCACAAATTCCAGAAAGA+CGG + Chr5:105979885-105979904 MsG0580030055.01.T01:intron 30.0%
AATTCAAAAGGTTTCAACAG+TGG - Chr5:105977965-105977984 None:intergenic 30.0%
ACAAAGATGGGAAAATATGA+TGG - Chr5:105981532-105981551 None:intergenic 30.0%
ACTTCTCCAAAACATCAATA+TGG - Chr5:105982890-105982909 None:intergenic 30.0%
AGATCATTCTTTAATTCCGA+CGG - Chr5:105982790-105982809 None:intergenic 30.0%
ATATTAAGAGCTAAACTTCC+AGG + Chr5:105981167-105981186 MsG0580030055.01.T01:CDS 30.0%
ATCAGAAAATAAGCAATCCT+TGG - Chr5:105981201-105981220 None:intergenic 30.0%
ATGTGAAAGAAGGATTACAA+AGG + Chr5:105979515-105979534 MsG0580030055.01.T01:CDS 30.0%
ATTGGAATAGAAACATCCTT+TGG - Chr5:105981666-105981685 None:intergenic 30.0%
CACAACATTACAAAATCAGA+AGG - Chr5:105981083-105981102 None:intergenic 30.0%
CATTCATGTTCCATATCTTT+AGG - Chr5:105981341-105981360 None:intergenic 30.0%
CATTGATATAACTCTTTCTC+CGG - Chr5:105981981-105982000 None:intergenic 30.0%
CTGTGTTTGTTTAAGGATTA+AGG + Chr5:105978409-105978428 MsG0580030055.01.T01:intron 30.0%
CTTAAAACATACCACAAAGA+TGG - Chr5:105981545-105981564 None:intergenic 30.0%
GATTCTCTTTGATATGAGTT+AGG - Chr5:105979869-105979888 None:intergenic 30.0%
GGACATTAGTATTACGAAAA+GGG - Chr5:105982768-105982787 None:intergenic 30.0%
GGCATCTGAATAATACAAAT+AGG - Chr5:105979430-105979449 None:intergenic 30.0%
GGTAAAAACTTCATATTCTC+GGG - Chr5:105981700-105981719 None:intergenic 30.0%
GTTTCTTTCTCATTTGCATT+TGG + Chr5:105977884-105977903 MsG0580030055.01.T01:five_prime_UTR 30.0%
TAACAAAAAACGAGTGACTT+GGG - Chr5:105982495-105982514 None:intergenic 30.0%
TCAATTATGACAAACTTAGC+AGG - Chr5:105979662-105979681 None:intergenic 30.0%
TGAGACCACTCAAATTAATA+TGG - Chr5:105982973-105982992 None:intergenic 30.0%
TTACAAACTCTCCCTATAAA+AGG + Chr5:105982512-105982531 MsG0580030055.01.T01:intron 30.0%
TTCAAGAAAAGATGACTGTA+GGG + Chr5:105977985-105978004 MsG0580030055.01.T01:exon 30.0%
TTCTATTTAAGGAGAAATGG+TGG + Chr5:105982838-105982857 MsG0580030055.01.T01:intron 30.0%
TTGCTTATTGAAGCACATAA+GGG + Chr5:105978625-105978644 MsG0580030055.01.T01:CDS 30.0%
TTTCAAGAAAAGATGACTGT+AGG + Chr5:105977984-105978003 MsG0580030055.01.T01:exon 30.0%
TTTGCTTATTGAAGCACATA+AGG + Chr5:105978624-105978643 MsG0580030055.01.T01:CDS 30.0%
! AAAGTTGATTACTGCTGATT+CGG + Chr5:105981896-105981915 MsG0580030055.01.T01:CDS 30.0%
! ATCATATTTTCCCATCTTTG+TGG + Chr5:105981531-105981550 MsG0580030055.01.T01:CDS 30.0%
! CATCTTTGTGGTATGTTTTA+AGG + Chr5:105981543-105981562 MsG0580030055.01.T01:intron 30.0%
! GCTTACAATACTATTTTCCT+TGG + Chr5:105980676-105980695 MsG0580030055.01.T01:CDS 30.0%
! TGAATTAGTCTATCTTCCAA+AGG + Chr5:105981647-105981666 MsG0580030055.01.T01:CDS 30.0%
!! TTGTCATAATTGATGATGGA+TGG + Chr5:105979669-105979688 MsG0580030055.01.T01:CDS 30.0%
!!! AACGCGTTTTGTTTCTTAAT+TGG - Chr5:105982446-105982465 None:intergenic 30.0%
!!! ACTTGACGGTTTAGTTTTTA+CGG - Chr5:105978863-105978882 None:intergenic 30.0%
!!! ATGTTTTGGAGAAGTTAGAA+TGG + Chr5:105982895-105982914 MsG0580030055.01.T01:intron 30.0%
!!! GTTATTTACAGTTTTGAGGA+AGG + Chr5:105979629-105979648 MsG0580030055.01.T01:intron 30.0%
!!! GTTTTTTGTGTGTGTAAATC+GGG + Chr5:105978821-105978840 MsG0580030055.01.T01:intron 30.0%
AAACGTGATCCAGAAACTTT+CGG + Chr5:105982414-105982433 MsG0580030055.01.T01:intron 35.0%
AAACTTTCTCAGGATTCACA+AGG - Chr5:105980251-105980270 None:intergenic 35.0%
AACAAAAAACGAGTGACTTG+GGG - Chr5:105982494-105982513 None:intergenic 35.0%
AAGAACACTCTTAATACCGA+AGG - Chr5:105982660-105982679 None:intergenic 35.0%
AAGCAAAAACTGTGTCTCAA+AGG - Chr5:105978611-105978630 None:intergenic 35.0%
AAGGAAATATCATCAGGCAT+TGG + Chr5:105980392-105980411 MsG0580030055.01.T01:CDS 35.0%
AAGTGTTTATATATGGGTCG+TGG + Chr5:105982243-105982262 MsG0580030055.01.T01:intron 35.0%
ACATGAAACATATCCCAATC+TGG - Chr5:105980715-105980734 None:intergenic 35.0%
ACTCAACCTAGTAACAACTT+CGG + Chr5:105983228-105983247 MsG0580030055.01.T01:intron 35.0%
ACTTCAGAGAATGTGAAAGA+AGG + Chr5:105979505-105979524 MsG0580030055.01.T01:CDS 35.0%
ACTTGCAAGGAAATATCATC+AGG + Chr5:105980386-105980405 MsG0580030055.01.T01:CDS 35.0%
AGAAAATGTGCTAGGATTTC+AGG + Chr5:105980774-105980793 MsG0580030055.01.T01:intron 35.0%
AGAACACTCTTAATACCGAA+GGG - Chr5:105982659-105982678 None:intergenic 35.0%
AGCAAAAACTGTGTCTCAAA+GGG - Chr5:105978610-105978629 None:intergenic 35.0%
AGTGTTTATATATGGGTCGT+GGG + Chr5:105982244-105982263 MsG0580030055.01.T01:intron 35.0%
ATCAAGATGTTCAATTCAGG+AGG + Chr5:105981774-105981793 MsG0580030055.01.T01:CDS 35.0%
ATGAATCACAGAACAGAGAA+AGG - Chr5:105977939-105977958 None:intergenic 35.0%
ATGGTATCTAATGCTTCATC+TGG - Chr5:105980210-105980229 None:intergenic 35.0%
ATGTTTCCATTCAACACCAT+TGG - Chr5:105979714-105979733 None:intergenic 35.0%
ATTCAGTTACGAGGAAGAAT+CGG + Chr5:105981929-105981948 MsG0580030055.01.T01:CDS 35.0%
ATTGAGATTTGTGTCGAAAG+TGG + Chr5:105978772-105978791 MsG0580030055.01.T01:CDS 35.0%
ATTGCAGTCTCCTAAAGATA+TGG + Chr5:105981328-105981347 MsG0580030055.01.T01:intron 35.0%
CAGAATATCCTTGAAACTCT+TGG + Chr5:105980339-105980358 MsG0580030055.01.T01:CDS 35.0%
CGGAGAAAGAGTTATATCAA+TGG + Chr5:105981979-105981998 MsG0580030055.01.T01:CDS 35.0%
CTTCGGTAGATGATAGAATT+TGG + Chr5:105983245-105983264 MsG0580030055.01.T01:intron 35.0%
GAAAATAAGCAATCCTTGGT+TGG - Chr5:105981197-105981216 None:intergenic 35.0%
GAATCAGCAGTAATCAACTT+TGG - Chr5:105981897-105981916 None:intergenic 35.0%
GACTATGAACTTAAGACCAA+GGG - Chr5:105982694-105982713 None:intergenic 35.0%
GACTTAAAAATGTCCCACAT+TGG + Chr5:105982202-105982221 MsG0580030055.01.T01:intron 35.0%
GAGAATTACACCCTCAAATA+TGG - Chr5:105983066-105983085 None:intergenic 35.0%
GATCATTCTTTAATTCCGAC+GGG - Chr5:105982789-105982808 None:intergenic 35.0%
GGAACATTATGAGTCAAAGA+TGG + Chr5:105980146-105980165 MsG0580030055.01.T01:CDS 35.0%
GGGACATTAGTATTACGAAA+AGG - Chr5:105982769-105982788 None:intergenic 35.0%
GGTAATATGATGAATTCCCA+TGG - Chr5:105979940-105979959 None:intergenic 35.0%
GGTCTTAGTACCATATTTGA+GGG + Chr5:105983053-105983072 MsG0580030055.01.T01:intron 35.0%
GGTGTTTCTTCTGATCAAAA+GGG + Chr5:105978131-105978150 MsG0580030055.01.T01:CDS 35.0%
GTAACAAAAAACGAGTGACT+TGG - Chr5:105982496-105982515 None:intergenic 35.0%
GTTGACACTGTGTTTGTTTA+AGG + Chr5:105978402-105978421 MsG0580030055.01.T01:intron 35.0%
TAAAAATGTCCCACATTGGA+AGG + Chr5:105982206-105982225 MsG0580030055.01.T01:intron 35.0%
TATCTAATGCTTCATCTGGT+TGG - Chr5:105980206-105980225 None:intergenic 35.0%
TCAAGAAAAGATGACTGTAG+GGG + Chr5:105977986-105978005 MsG0580030055.01.T01:exon 35.0%
TCAAGATGTTCAATTCAGGA+GGG + Chr5:105981775-105981794 MsG0580030055.01.T01:CDS 35.0%
TCACACAATTCACATTGCAT+CGG + Chr5:105980651-105980670 MsG0580030055.01.T01:CDS 35.0%
TCTAGGAACTTTCCTGATAA+CGG + Chr5:105980426-105980445 MsG0580030055.01.T01:CDS 35.0%
TCTTCAAAAGATTGAAGTCG+TGG - Chr5:105981124-105981143 None:intergenic 35.0%
TGAATCACAGAACAGAGAAA+GGG - Chr5:105977938-105977957 None:intergenic 35.0%
TGAATTTATGCAGCCAGATT+GGG + Chr5:105980699-105980718 MsG0580030055.01.T01:CDS 35.0%
TGCTCCATTAGTTCAGTATT+AGG + Chr5:105979151-105979170 MsG0580030055.01.T01:intron 35.0%
TGGAACATGAATGACTATTC+TGG + Chr5:105981348-105981367 MsG0580030055.01.T01:CDS 35.0%
TGGATATATCCGAAAGTTTC+TGG - Chr5:105982426-105982445 None:intergenic 35.0%
TGGTGTTTCTTCTGATCAAA+AGG + Chr5:105978130-105978149 MsG0580030055.01.T01:CDS 35.0%
TGGTTCATAGAAAATGTGCT+AGG + Chr5:105980766-105980785 MsG0580030055.01.T01:intron 35.0%
TGTTTACGATGTTTGTTTGC+AGG + Chr5:105981624-105981643 MsG0580030055.01.T01:intron 35.0%
TGTTTCCATTCAACACCATT+GGG - Chr5:105979713-105979732 None:intergenic 35.0%
TTAGAGCTTCAGATGATTTC+TGG + Chr5:105980611-105980630 MsG0580030055.01.T01:CDS 35.0%
TTCATATTCTCGGGATTTCA+TGG - Chr5:105981691-105981710 None:intergenic 35.0%
TTGATCAATGGTGCATTTCT+TGG + Chr5:105978110-105978129 MsG0580030055.01.T01:CDS 35.0%
TTTACACCACACTCCTAAAA+AGG + Chr5:105981567-105981586 MsG0580030055.01.T01:intron 35.0%
TTTATAGGCATGTGTATGTG+TGG + Chr5:105980073-105980092 MsG0580030055.01.T01:intron 35.0%
! GTAGTGCCATATTGATGTTT+TGG + Chr5:105982881-105982900 MsG0580030055.01.T01:intron 35.0%
! TGGTCTTAGTACCATATTTG+AGG + Chr5:105983052-105983071 MsG0580030055.01.T01:intron 35.0%
!! AAAGTTTCTGGATCACGTTT+TGG - Chr5:105982414-105982433 None:intergenic 35.0%
!! AATGACTATTCTGGAGTTGT+TGG + Chr5:105981357-105981376 MsG0580030055.01.T01:CDS 35.0%
!! ACAATACAGACGGATTGTAT+AGG + Chr5:105980469-105980488 MsG0580030055.01.T01:CDS 35.0%
!! ACCATTGCAATTAATGGACT+CGG + Chr5:105980225-105980244 MsG0580030055.01.T01:CDS 35.0%
!! ATATGTTGAACTGGTTTGGA+TGG + Chr5:105979452-105979471 MsG0580030055.01.T01:CDS 35.0%
!! ATGACTATTCTGGAGTTGTT+GGG + Chr5:105981358-105981377 MsG0580030055.01.T01:CDS 35.0%
!! ATGGAAACTTGATGGTGTTA+GGG + Chr5:105978027-105978046 MsG0580030055.01.T01:CDS 35.0%
!! GACTCATTTGGTGTTTATTG+GGG + Chr5:105978977-105978996 MsG0580030055.01.T01:CDS 35.0%
!! GGACTCATTTGGTGTTTATT+GGG + Chr5:105978976-105978995 MsG0580030055.01.T01:CDS 35.0%
!! GTAACTTAGACCACTTTTAG+TGG - Chr5:105979553-105979572 None:intergenic 35.0%
!! GTTTTGTTACCTCTTTTGGA+AGG + Chr5:105978709-105978728 MsG0580030055.01.T01:CDS 35.0%
!! TCTTTTGGAAGGAGATTTCA+GGG + Chr5:105978720-105978739 MsG0580030055.01.T01:CDS 35.0%
!! TTAGTTTTTACGGTTACGTG+TGG - Chr5:105978853-105978872 None:intergenic 35.0%
!! TTTTGGAGAAGTTAGAATGG+TGG + Chr5:105982898-105982917 MsG0580030055.01.T01:intron 35.0%
!!! ATTTACAGTTTTGAGGAAGG+TGG + Chr5:105979632-105979651 MsG0580030055.01.T01:intron 35.0%
AACTTAAGACCAAGGGACTA+TGG - Chr5:105982687-105982706 None:intergenic 40.0%
AAGAAGCTTGTACTTCCTGA+CGG + Chr5:105981140-105981159 MsG0580030055.01.T01:CDS 40.0%
ACATACTCAAGCTTGCCAAT+AGG - Chr5:105978173-105978192 None:intergenic 40.0%
ACATCCTACAATCATGCACA+CGG - Chr5:105978934-105978953 None:intergenic 40.0%
AGATGCCAGATATGTTGAAC+TGG + Chr5:105979443-105979462 MsG0580030055.01.T01:intron 40.0%
AGTCTACCTTGCACAACTTT+GGG + Chr5:105983165-105983184 MsG0580030055.01.T01:intron 40.0%
ATATGATGAATTCCCATGGC+AGG - Chr5:105979936-105979955 None:intergenic 40.0%
ATGAACTTTAAGCTGCGACA+AGG - Chr5:105979383-105979402 None:intergenic 40.0%
ATGTGAATTGTGTGAGATGC+AGG - Chr5:105980646-105980665 None:intergenic 40.0%
ATTTCAGAGTCTTCATCCGA+TGG + Chr5:105980824-105980843 MsG0580030055.01.T01:intron 40.0%
ATTTCAGGGCTGTTCTTCAA+GGG + Chr5:105978734-105978753 MsG0580030055.01.T01:CDS 40.0%
CAAGATGTTCAATTCAGGAG+GGG + Chr5:105981776-105981795 MsG0580030055.01.T01:CDS 40.0%
CACAGTCACTGACATCATTA+GGG + Chr5:105981452-105981471 MsG0580030055.01.T01:CDS 40.0%
CACGCAATAACAGGATATTG+GGG + Chr5:105980096-105980115 MsG0580030055.01.T01:CDS 40.0%
CAGCAAATGATTCCGTTATC+AGG - Chr5:105980441-105980460 None:intergenic 40.0%
CATAAGGGTCGTGATATTGA+CGG + Chr5:105978640-105978659 MsG0580030055.01.T01:CDS 40.0%
CATCTACCGAAGTTGTTACT+AGG - Chr5:105983237-105983256 None:intergenic 40.0%
CCAAACCAGTTCAACATATC+TGG - Chr5:105979451-105979470 None:intergenic 40.0%
CCAGATATGTTGAACTGGTT+TGG + Chr5:105979448-105979467 MsG0580030055.01.T01:CDS 40.0%
CCATGAAAGAACTAGTGTGT+AGG + Chr5:105982176-105982195 MsG0580030055.01.T01:intron 40.0%
CTGAAATCTCCTTCCAAAAG+AGG - Chr5:105978721-105978740 None:intergenic 40.0%
CTGATGTGGAGGAATTTGAT+GGG + Chr5:105978955-105978974 MsG0580030055.01.T01:CDS 40.0%
GACTATCAATTTGAGTGTGC+CGG + Chr5:105981959-105981978 MsG0580030055.01.T01:CDS 40.0%
GAGGATGTCCTATTTATGTC+AGG + Chr5:105980877-105980896 MsG0580030055.01.T01:CDS 40.0%
GCAAAAACTGTGTCTCAAAG+GGG - Chr5:105978609-105978628 None:intergenic 40.0%
GCACGCAATAACAGGATATT+GGG + Chr5:105980095-105980114 MsG0580030055.01.T01:CDS 40.0%
GCTCTTAATATAGAACCGTC+AGG - Chr5:105981158-105981177 None:intergenic 40.0%
GGAATTTGATGGGACTCATT+TGG + Chr5:105978965-105978984 MsG0580030055.01.T01:CDS 40.0%
GGACTATGAACTTAAGACCA+AGG - Chr5:105982695-105982714 None:intergenic 40.0%
GTATTCAATTGTCAAGGAGC+TGG + Chr5:105981381-105981400 MsG0580030055.01.T01:CDS 40.0%
GTCTCAGCACCATAATAGAA+TGG + Chr5:105982939-105982958 MsG0580030055.01.T01:intron 40.0%
GTGAATTTATGCAGCCAGAT+TGG + Chr5:105980698-105980717 MsG0580030055.01.T01:CDS 40.0%
GTGGTAACACCATATTTGAG+TGG + Chr5:105982917-105982936 MsG0580030055.01.T01:intron 40.0%
GTTAATCGAACAGTTGTAGC+TGG + Chr5:105983110-105983129 MsG0580030055.01.T01:intron 40.0%
GTTTCCATTCAACACCATTG+GGG - Chr5:105979712-105979731 None:intergenic 40.0%
TAATGCTTCATCTGGTTGGT+TGG - Chr5:105980202-105980221 None:intergenic 40.0%
TAGTCTACCTTGCACAACTT+TGG + Chr5:105983164-105983183 MsG0580030055.01.T01:intron 40.0%
TATCGACCATTTATCGACAG+TGG + Chr5:105981482-105981501 MsG0580030055.01.T01:CDS 40.0%
TATGATGAATTCCCATGGCA+GGG - Chr5:105979935-105979954 None:intergenic 40.0%
TCGTAATACTAATGTCCCGT+CGG + Chr5:105982771-105982790 MsG0580030055.01.T01:intron 40.0%
TCTCGGGATTTCATGGTAAT+TGG - Chr5:105981684-105981703 None:intergenic 40.0%
TCTGGTGGTTCTTTGATCAA+TGG + Chr5:105978098-105978117 MsG0580030055.01.T01:CDS 40.0%
TGCATGAGTCACAATACAGA+CGG + Chr5:105980459-105980478 MsG0580030055.01.T01:CDS 40.0%
TGTGAATTGTGTGAGATGCA+GGG - Chr5:105980645-105980664 None:intergenic 40.0%
TGTTGCTGATGGAAACTTGA+TGG + Chr5:105978019-105978038 MsG0580030055.01.T01:CDS 40.0%
TTAATACCGAAGGGACAGAA+AGG - Chr5:105982650-105982669 None:intergenic 40.0%
TTCAGTTACGAGGAAGAATC+GGG + Chr5:105981930-105981949 MsG0580030055.01.T01:CDS 40.0%
TTCTTAAGACCATAGTCCCT+TGG + Chr5:105982675-105982694 MsG0580030055.01.T01:intron 40.0%
TTTGACACCATCAATACCAG+CGG - Chr5:105980310-105980329 None:intergenic 40.0%
! AAAGAAACAGAGAAGGTGTG+AGG - Chr5:105977872-105977891 None:intergenic 40.0%
! AATGTTTCCATGAAAGTGCG+CGG + Chr5:105981837-105981856 MsG0580030055.01.T01:CDS 40.0%
! ATCAGCTTGTTCTTTGCTCA+TGG + Chr5:105981297-105981316 MsG0580030055.01.T01:intron 40.0%
! CATTTGGTAATTCCGTCACA+GGG - Chr5:105981728-105981747 None:intergenic 40.0%
! CCTACACACTAGTTCTTTCA+TGG - Chr5:105982179-105982198 None:intergenic 40.0%
! GGGGAACTTCTCCTTTTATA+GGG - Chr5:105982526-105982545 None:intergenic 40.0%
! GTCTTTTCCGCTTCAAAATG+TGG + Chr5:105978545-105978564 MsG0580030055.01.T01:CDS 40.0%
! GTTGGGGTATTCAATTGTCA+AGG + Chr5:105981375-105981394 MsG0580030055.01.T01:CDS 40.0%
! TTGATGCAGTTCAAAGCGTT+CGG + Chr5:105980582-105980601 MsG0580030055.01.T01:intron 40.0%
! TTTCGGTGTGAAGAATGAGT+GGG - Chr5:105982547-105982566 None:intergenic 40.0%
! TTTTACCATAGTCCCTGTGA+CGG + Chr5:105981713-105981732 MsG0580030055.01.T01:CDS 40.0%
! TTTTCCGCTTCAAAATGTGG+TGG + Chr5:105978548-105978567 MsG0580030055.01.T01:CDS 40.0%
! TTTTCTGATCCTGCTAGAGA+TGG + Chr5:105981212-105981231 MsG0580030055.01.T01:CDS 40.0%
!! CTCTTTTGGAAGGAGATTTC+AGG + Chr5:105978719-105978738 MsG0580030055.01.T01:CDS 40.0%
!! CTGATGAATAAGCACCGAAA+AGG - Chr5:105981869-105981888 None:intergenic 40.0%
!! GAAATATCATCAGGCATTGG+AGG + Chr5:105980395-105980414 MsG0580030055.01.T01:CDS 40.0%
!! GAACAAAGAGCATTGCTGAA+GGG + Chr5:105977906-105977925 MsG0580030055.01.T01:five_prime_UTR 40.0%
!! GATGGAAACTTGATGGTGTT+AGG + Chr5:105978026-105978045 MsG0580030055.01.T01:CDS 40.0%
!! GCTCTCTTTAAGACGTTTCA+TGG - Chr5:105983196-105983215 None:intergenic 40.0%
!! GGGACTCATTTGGTGTTTAT+TGG + Chr5:105978975-105978994 MsG0580030055.01.T01:CDS 40.0%
!! GTGTAACCTTTTTAGGAGTG+TGG - Chr5:105981576-105981595 None:intergenic 40.0%
!! TACAGACGGATTGTATAGGT+AGG + Chr5:105980473-105980492 MsG0580030055.01.T01:intron 40.0%
!! TCATCCACCACATTTTGAAG+CGG - Chr5:105978555-105978574 None:intergenic 40.0%
!! TCTGGATCACGTTTTGGATT+GGG - Chr5:105982408-105982427 None:intergenic 40.0%
!! TGACTATTCTGGAGTTGTTG+GGG + Chr5:105981359-105981378 MsG0580030055.01.T01:CDS 40.0%
!! TTCTGGATCACGTTTTGGAT+TGG - Chr5:105982409-105982428 None:intergenic 40.0%
!! TTTTCGGTGTGAAGAATGAG+TGG - Chr5:105982548-105982567 None:intergenic 40.0%
!!! TAGCTGGACTTGTTTTATCC+TGG + Chr5:105983126-105983145 MsG0580030055.01.T01:intron 40.0%
AAGAGGTAACAAAACCGCGT+AGG - Chr5:105978704-105978723 None:intergenic 45.0%
ACTCAGAGAATGGGTAACTG+TGG + Chr5:105978574-105978593 MsG0580030055.01.T01:CDS 45.0%
AGAAACTCGCAATCGCAAGT+CGG - Chr5:105982615-105982634 None:intergenic 45.0%
AGAGGTGGAATTCAGTTACG+AGG + Chr5:105981920-105981939 MsG0580030055.01.T01:CDS 45.0%
AGTCGCAGAGTCTTTCCTAT+TGG + Chr5:105978155-105978174 MsG0580030055.01.T01:CDS 45.0%
ATCAAAGAACCACCAGAAGC+AGG - Chr5:105978095-105978114 None:intergenic 45.0%
ATCCTGCTAGAGATGGAAAG+AGG + Chr5:105981219-105981238 MsG0580030055.01.T01:CDS 45.0%
ATCCTTGAAACTCTTGGAGC+AGG + Chr5:105980345-105980364 MsG0580030055.01.T01:CDS 45.0%
CAAATTCCAGAAAGACGGCA+AGG + Chr5:105979890-105979909 MsG0580030055.01.T01:intron 45.0%
CATCTGCCACTGTCGATAAA+TGG - Chr5:105981491-105981510 None:intergenic 45.0%
CCATCAAATTCCTCCACATC+AGG - Chr5:105978957-105978976 None:intergenic 45.0%
CCTGATGTGGAGGAATTTGA+TGG + Chr5:105978954-105978973 MsG0580030055.01.T01:CDS 45.0%
CGACAGTGGCAGATGATAAA+TGG + Chr5:105981496-105981515 MsG0580030055.01.T01:CDS 45.0%
CTGGCTGCATAAATTCACCA+AGG - Chr5:105980696-105980715 None:intergenic 45.0%
GATTGTAGGATGTCCTGATG+TGG + Chr5:105978941-105978960 MsG0580030055.01.T01:intron 45.0%
GATTTCAGGGCTGTTCTTCA+AGG + Chr5:105978733-105978752 MsG0580030055.01.T01:CDS 45.0%
GCAATAACAGGATATTGGGG+TGG + Chr5:105980099-105980118 MsG0580030055.01.T01:CDS 45.0%
GCACAGTCACTGACATCATT+AGG + Chr5:105981451-105981470 MsG0580030055.01.T01:CDS 45.0%
GCACTACGACCACTCAAATA+TGG - Chr5:105982868-105982887 None:intergenic 45.0%
GCAGCATGATATTCAGCCAT+CGG - Chr5:105980843-105980862 None:intergenic 45.0%
GCAGGAATATCTGTTGCTGA+TGG + Chr5:105978008-105978027 MsG0580030055.01.T01:CDS 45.0%
GCCGAGTCCATTAATTGCAA+TGG - Chr5:105980229-105980248 None:intergenic 45.0%
GCTGTCAAAGAGTTCAGTTC+TGG + Chr5:105981798-105981817 MsG0580030055.01.T01:CDS 45.0%
GGCACGCAATAACAGGATAT+TGG + Chr5:105980094-105980113 MsG0580030055.01.T01:CDS 45.0%
GGTGGATCACCATATTTGAG+TGG + Chr5:105982856-105982875 MsG0580030055.01.T01:intron 45.0%
GGTGTTAAACCTGGGATTAG+TGG + Chr5:105980120-105980139 MsG0580030055.01.T01:CDS 45.0%
GTGCTGAGACCACTCAAATA+TGG - Chr5:105982929-105982948 None:intergenic 45.0%
GTGGCAGATGATAAATGGAC+AGG + Chr5:105981501-105981520 MsG0580030055.01.T01:CDS 45.0%
GTTCTTGTTACTCCTGCTTC+TGG + Chr5:105978080-105978099 MsG0580030055.01.T01:CDS 45.0%
TAATTCCGTCACAGGGACTA+TGG - Chr5:105981721-105981740 None:intergenic 45.0%
TACCTCTTTCCATCTCTAGC+AGG - Chr5:105981224-105981243 None:intergenic 45.0%
TATGTGTGGCACGCAATAAC+AGG + Chr5:105980087-105980106 MsG0580030055.01.T01:CDS 45.0%
TCAATTGTCAAGGAGCTGGT+TGG + Chr5:105981385-105981404 MsG0580030055.01.T01:CDS 45.0%
TCTACTCCTTTCTGTCCCTT+CGG + Chr5:105982641-105982660 MsG0580030055.01.T01:intron 45.0%
TGACTCCAGGAGATGAGATA+GGG - Chr5:105980176-105980195 None:intergenic 45.0%
TGGATGGCAATCTGTTAGCA+TGG + Chr5:105979685-105979704 MsG0580030055.01.T01:CDS 45.0%
TGTGATCCTAGGCAACTTGA+CGG - Chr5:105978877-105978896 None:intergenic 45.0%
TTACGAGGAAGAATCGGGAT+TGG + Chr5:105981935-105981954 MsG0580030055.01.T01:CDS 45.0%
TTGACTCCAGGAGATGAGAT+AGG - Chr5:105980177-105980196 None:intergenic 45.0%
TTGTCATCGCGAGAGAAAGA+AGG + Chr5:105979313-105979332 MsG0580030055.01.T01:CDS 45.0%
TTTGCCGTGTGCATGATTGT+AGG + Chr5:105978927-105978946 MsG0580030055.01.T01:intron 45.0%
TTTGTTACGCGTAGCGCTTA+CGG - Chr5:105982366-105982385 None:intergenic 45.0%
! ACTAAACCGTCAAGTTGCCT+AGG + Chr5:105978868-105978887 MsG0580030055.01.T01:intron 45.0%
! AGAAGGTGTGAGGTTTGATG+AGG - Chr5:105977862-105977881 None:intergenic 45.0%
! AGGATTAAGGTGACCCCTTT+TGG + Chr5:105978422-105978441 MsG0580030055.01.T01:intron 45.0%
! ATGTTTCCATGAAAGTGCGC+GGG + Chr5:105981838-105981857 MsG0580030055.01.T01:CDS 45.0%
! ATTGGGGTGGTGTTAAACCT+GGG + Chr5:105980112-105980131 MsG0580030055.01.T01:CDS 45.0%
! CCATTTGGTAATTCCGTCAC+AGG - Chr5:105981729-105981748 None:intergenic 45.0%
! CCTGTGACGGAATTACCAAA+TGG + Chr5:105981726-105981745 MsG0580030055.01.T01:CDS 45.0%
! GAAGGTGTGAGGTTTGATGA+GGG - Chr5:105977861-105977880 None:intergenic 45.0%
! GGGGGAACTTCTCCTTTTAT+AGG - Chr5:105982527-105982546 None:intergenic 45.0%
! GTTTTTACGGTTACGTGTGG+AGG - Chr5:105978850-105978869 None:intergenic 45.0%
! TAAACCTGGGATTAGTGGCA+TGG + Chr5:105980125-105980144 MsG0580030055.01.T01:CDS 45.0%
! TATTGGGGTGGTGTTAAACC+TGG + Chr5:105980111-105980130 MsG0580030055.01.T01:CDS 45.0%
! TGGTGGATGACTCAGAGAAT+GGG + Chr5:105978565-105978584 MsG0580030055.01.T01:CDS 45.0%
! TTCGGTGTGAAGAATGAGTG+GGG - Chr5:105982546-105982565 None:intergenic 45.0%
!! ACTGGTTTGGATGGTGTACA+TGG + Chr5:105979461-105979480 MsG0580030055.01.T01:CDS 45.0%
!! CACATTCTCTGAAGTGACGT+TGG - Chr5:105979500-105979519 None:intergenic 45.0%
!! CATTTGGTGTTTATTGGGGC+TGG + Chr5:105978981-105979000 MsG0580030055.01.T01:CDS 45.0%
!! CTGGTTTGGATGGTGTACAT+GGG + Chr5:105979462-105979481 MsG0580030055.01.T01:CDS 45.0%
!! CTTGATGGTGTTAGGGAAGA+AGG + Chr5:105978034-105978053 MsG0580030055.01.T01:CDS 45.0%
!! GATCACGTTTTGGATTGGGT+CGG - Chr5:105982404-105982423 None:intergenic 45.0%
!! GATTACTGCTGATTCGGAAG+AGG + Chr5:105981902-105981921 MsG0580030055.01.T01:CDS 45.0%
!! GGAACAAAGAGCATTGCTGA+AGG + Chr5:105977905-105977924 MsG0580030055.01.T01:five_prime_UTR 45.0%
!!! CGCGGTTTTGTTACCTCTTT+TGG + Chr5:105978705-105978724 MsG0580030055.01.T01:CDS 45.0%
!!! CTGGACTTGTTTTATCCTGG+AGG + Chr5:105983129-105983148 MsG0580030055.01.T01:intron 45.0%
!!! GACTTGTTTTATCCTGGAGG+CGG + Chr5:105983132-105983151 MsG0580030055.01.T01:intron 45.0%
!!! TTTTAATAATTTTCTATTTA+AGG + Chr5:105982827-105982846 MsG0580030055.01.T01:intron 5.0%
AAGACGGCAAGGAAGGTCAT+CGG + Chr5:105979901-105979920 MsG0580030055.01.T01:intron 50.0%
AAGGGTCGTGATATTGACGG+AGG + Chr5:105978643-105978662 MsG0580030055.01.T01:CDS 50.0%
ACGTCTTAAAGAGAGCGACC+TGG + Chr5:105983200-105983219 MsG0580030055.01.T01:intron 50.0%
ACTTCCAGGAAGACCAACCA+AGG + Chr5:105981181-105981200 MsG0580030055.01.T01:CDS 50.0%
AGATTGAAGTCGTGGTGTCC+AGG - Chr5:105981116-105981135 None:intergenic 50.0%
AGGGTCGTGATATTGACGGA+GGG + Chr5:105978644-105978663 MsG0580030055.01.T01:CDS 50.0%
AGTCTCAGCACTGTGATCCT+AGG - Chr5:105978888-105978907 None:intergenic 50.0%
ATGATGTCAGTGACTGTGCC+TGG - Chr5:105981450-105981469 None:intergenic 50.0%
ATGTTGTGTAGCGACAAGCC+TGG + Chr5:105981095-105981114 MsG0580030055.01.T01:intron 50.0%
CAAGGAAGGTCATCGGATAG+AGG + Chr5:105979908-105979927 MsG0580030055.01.T01:intron 50.0%
CACTCATATCTAGCATCCGC+TGG + Chr5:105980291-105980310 MsG0580030055.01.T01:CDS 50.0%
CAGCGGATGCTAGATATGAG+TGG - Chr5:105980293-105980312 None:intergenic 50.0%
CTGGATTCTCGTCGTGGATA+AGG - Chr5:105981431-105981450 None:intergenic 50.0%
CTTATCCACGACGAGAATCC+AGG + Chr5:105981429-105981448 MsG0580030055.01.T01:CDS 50.0%
CTTGTTACTCCTGCTTCTGG+TGG + Chr5:105978083-105978102 MsG0580030055.01.T01:CDS 50.0%
GAAAAGATGACTGTAGGGGC+AGG + Chr5:105977990-105978009 MsG0580030055.01.T01:exon 50.0%
GAAACTCTTGGAGCAGGACA+TGG + Chr5:105980351-105980370 MsG0580030055.01.T01:CDS 50.0%
GATATTGACGGAGGGGTTGA+CGG + Chr5:105978652-105978671 MsG0580030055.01.T01:CDS 50.0%
GCACTACCCAAAGTTGTGCA+AGG - Chr5:105983174-105983193 None:intergenic 50.0%
GCTTTCCCTATCTCATCTCC+TGG + Chr5:105980168-105980187 MsG0580030055.01.T01:CDS 50.0%
GGCGCAAATTTGACGCCATT+TGG - Chr5:105981744-105981763 None:intergenic 50.0%
GGCGTCAAATTTGCGCCTAT+TGG + Chr5:105981747-105981766 MsG0580030055.01.T01:CDS 50.0%
GGTGGAGAAGAAGACCAAGA+TGG + Chr5:105978673-105978692 MsG0580030055.01.T01:CDS 50.0%
GTCCTGCTCCAAGAGTTTCA+AGG - Chr5:105980350-105980369 None:intergenic 50.0%
GTGTGAGGTTTGATGAGGGA+GGG - Chr5:105977857-105977876 None:intergenic 50.0%
TATATATGGGTCGTGGGTCG+TGG + Chr5:105982250-105982269 MsG0580030055.01.T01:intron 50.0%
TCGGTGTGAAGAATGAGTGG+GGG - Chr5:105982545-105982564 None:intergenic 50.0%
TCTGTTAGCATGGACCCCAA+TGG + Chr5:105979695-105979714 MsG0580030055.01.T01:CDS 50.0%
TGTAGGATGTCCTGATGTGG+AGG + Chr5:105978944-105978963 MsG0580030055.01.T01:intron 50.0%
TGTGAGGTTTGATGAGGGAG+GGG - Chr5:105977856-105977875 None:intergenic 50.0%
TGTTCCATGCCACTAATCCC+AGG - Chr5:105980132-105980151 None:intergenic 50.0%
TTCCAGAAAGACGGCAAGGA+AGG + Chr5:105979894-105979913 MsG0580030055.01.T01:intron 50.0%
TTGGGGTGACCTTCCAATGT+GGG - Chr5:105982218-105982237 None:intergenic 50.0%
! CCAAGATGGTTCTACCTACG+CGG + Chr5:105978687-105978706 MsG0580030055.01.T01:CDS 50.0%
! CTAGCATCCGCTGGTATTGA+TGG + Chr5:105980300-105980319 MsG0580030055.01.T01:CDS 50.0%
! TACTAGGTTGAGTCACGACC+AGG - Chr5:105983221-105983240 None:intergenic 50.0%
! TGGACCCCAATGGTGTTGAA+TGG + Chr5:105979705-105979724 MsG0580030055.01.T01:CDS 50.0%
!! AGGGAAGAAGGTTCTGAGTC+AGG + Chr5:105978046-105978065 MsG0580030055.01.T01:CDS 50.0%
!! CAATCCTTGGTTGGTCTTCC+TGG - Chr5:105981188-105981207 None:intergenic 50.0%
!! CATTGGAGGCATCGATCTCT+AGG + Chr5:105980409-105980428 MsG0580030055.01.T01:CDS 50.0%
!! GTGGTGGATGACTCAGAGAA+TGG + Chr5:105978564-105978583 MsG0580030055.01.T01:CDS 50.0%
!! TACTGCTGATTCGGAAGAGG+TGG + Chr5:105981905-105981924 MsG0580030055.01.T01:CDS 50.0%
AACTCGCAATCGCAAGTCGG+AGG - Chr5:105982612-105982631 None:intergenic 55.0%
ACTCGCAATCGCAAGTCGGA+GGG - Chr5:105982611-105982630 None:intergenic 55.0%
ACTCTTGGAGCAGGACATGG+TGG + Chr5:105980354-105980373 MsG0580030055.01.T01:CDS 55.0%
AGGTTTGATGAGGGAGGGGA+AGG - Chr5:105977852-105977871 None:intergenic 55.0%
CATGCTGCTGCAAGAGCAGT+TGG + Chr5:105980855-105980874 MsG0580030055.01.T01:CDS 55.0%
CCGCGTAGGTAGAACCATCT+TGG - Chr5:105978690-105978709 None:intergenic 55.0%
CTCTTGGAGCAGGACATGGT+GGG + Chr5:105980355-105980374 MsG0580030055.01.T01:CDS 55.0%
GACCTTCCTTGCCGTCTTTC+TGG - Chr5:105979899-105979918 None:intergenic 55.0%
GGGTCGTGATATTGACGGAG+GGG + Chr5:105978645-105978664 MsG0580030055.01.T01:CDS 55.0%
GGTGTGAGGTTTGATGAGGG+AGG - Chr5:105977858-105977877 None:intergenic 55.0%
GGTTTGATGAGGGAGGGGAA+GGG - Chr5:105977851-105977870 None:intergenic 55.0%
GTGGGAGGGTGAAACTTGCA+AGG + Chr5:105980373-105980392 MsG0580030055.01.T01:CDS 55.0%
GTGTGAGATGCAGGGTCTCT+TGG - Chr5:105980637-105980656 None:intergenic 55.0%
GTTGGGGTGACCTTCCAATG+TGG - Chr5:105982219-105982238 None:intergenic 55.0%
! GGAGCTGGTTGGTGCAAAGT+TGG + Chr5:105981396-105981415 MsG0580030055.01.T01:CDS 55.0%
! GGTTGGTTGGACTTGACTCC+AGG - Chr5:105980189-105980208 None:intergenic 55.0%
! GTTTTATCCTGGAGGCGGCA+TGG + Chr5:105983137-105983156 MsG0580030055.01.T01:intron 55.0%
ATTGACGGAGGGGTTGACGG+TGG + Chr5:105978655-105978674 MsG0580030055.01.T01:CDS 60.0%
CGGATAGAGGACCCTGCCAT+GGG + Chr5:105979921-105979940 MsG0580030055.01.T01:intron 60.0%
CTATCAACCATGCCGCCTCC+AGG - Chr5:105983147-105983166 None:intergenic 60.0%
CTGTGCCTGGATTCTCGTCG+TGG - Chr5:105981437-105981456 None:intergenic 60.0%
GCTGCTGCAAGAGCAGTTGG+AGG + Chr5:105980858-105980877 MsG0580030055.01.T01:CDS 60.0%
TCGGATAGAGGACCCTGCCA+TGG + Chr5:105979920-105979939 MsG0580030055.01.T01:intron 60.0%
! TCCATGAAAGTGCGCGGGTG+TGG + Chr5:105981843-105981862 MsG0580030055.01.T01:CDS 60.0%
! TGGAGCAGGACATGGTGGGA+GGG + Chr5:105980359-105980378 MsG0580030055.01.T01:CDS 60.0%
! TTGGAGCAGGACATGGTGGG+AGG + Chr5:105980358-105980377 MsG0580030055.01.T01:CDS 60.0%
GCCACACCCGCGCACTTTCA+TGG - Chr5:105981847-105981866 None:intergenic 65.0%
! GTGCGCGGGTGTGGCCTTTT+CGG + Chr5:105981852-105981871 MsG0580030055.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr5 gene 105977828 105983329 105977828 ID=MsG0580030055.01;Name=MsG0580030055.01
Chr5 mRNA 105977828 105983329 105977828 ID=MsG0580030055.01.T01;Parent=MsG0580030055.01;Name=MsG0580030055.01.T01;_AED=0.25;_eAED=0.25;_QI=168|0.91|1|1|0.91|0.84|13|124|715
Chr5 exon 105977828 105978186 105977828 ID=MsG0580030055.01.T01:exon:14434;Parent=MsG0580030055.01.T01
Chr5 exon 105978528 105978793 105978528 ID=MsG0580030055.01.T01:exon:14435;Parent=MsG0580030055.01.T01
Chr5 exon 105978949 105979039 105978949 ID=MsG0580030055.01.T01:exon:14436;Parent=MsG0580030055.01.T01
Chr5 exon 105979286 105979334 105979286 ID=MsG0580030055.01.T01:exon:14437;Parent=MsG0580030055.01.T01
Chr5 exon 105979445 105979536 105979445 ID=MsG0580030055.01.T01:exon:14438;Parent=MsG0580030055.01.T01
Chr5 exon 105979640 105979747 105979640 ID=MsG0580030055.01.T01:exon:14439;Parent=MsG0580030055.01.T01
Chr5 exon 105980080 105980490 105980080 ID=MsG0580030055.01.T01:exon:14440;Parent=MsG0580030055.01.T01
Chr5 exon 105980591 105980732 105980591 ID=MsG0580030055.01.T01:exon:14441;Parent=MsG0580030055.01.T01
Chr5 exon 105980831 105980898 105980831 ID=MsG0580030055.01.T01:exon:14442;Parent=MsG0580030055.01.T01
Chr5 exon 105981106 105981240 105981106 ID=MsG0580030055.01.T01:exon:14443;Parent=MsG0580030055.01.T01
Chr5 exon 105981335 105981552 105981335 ID=MsG0580030055.01.T01:exon:14444;Parent=MsG0580030055.01.T01
Chr5 exon 105981646 105982123 105981646 ID=MsG0580030055.01.T01:exon:14445;Parent=MsG0580030055.01.T01
Chr5 exon 105983307 105983329 105983307 ID=MsG0580030055.01.T01:exon:14446;Parent=MsG0580030055.01.T01
Chr5 five_prime_UTR 105977828 105977995 105977828 ID=MsG0580030055.01.T01:five_prime_utr;Parent=MsG0580030055.01.T01
Chr5 CDS 105977996 105978186 105977996 ID=MsG0580030055.01.T01:cds;Parent=MsG0580030055.01.T01
Chr5 CDS 105978528 105978793 105978528 ID=MsG0580030055.01.T01:cds;Parent=MsG0580030055.01.T01
Chr5 CDS 105978949 105979039 105978949 ID=MsG0580030055.01.T01:cds;Parent=MsG0580030055.01.T01
Chr5 CDS 105979286 105979334 105979286 ID=MsG0580030055.01.T01:cds;Parent=MsG0580030055.01.T01
Chr5 CDS 105979445 105979536 105979445 ID=MsG0580030055.01.T01:cds;Parent=MsG0580030055.01.T01
Chr5 CDS 105979640 105979747 105979640 ID=MsG0580030055.01.T01:cds;Parent=MsG0580030055.01.T01
Chr5 CDS 105980080 105980490 105980080 ID=MsG0580030055.01.T01:cds;Parent=MsG0580030055.01.T01
Chr5 CDS 105980591 105980732 105980591 ID=MsG0580030055.01.T01:cds;Parent=MsG0580030055.01.T01
Chr5 CDS 105980831 105980898 105980831 ID=MsG0580030055.01.T01:cds;Parent=MsG0580030055.01.T01
Chr5 CDS 105981106 105981240 105981106 ID=MsG0580030055.01.T01:cds;Parent=MsG0580030055.01.T01
Chr5 CDS 105981335 105981552 105981335 ID=MsG0580030055.01.T01:cds;Parent=MsG0580030055.01.T01
Chr5 CDS 105981646 105982022 105981646 ID=MsG0580030055.01.T01:cds;Parent=MsG0580030055.01.T01
Chr5 three_prime_UTR 105982023 105982123 105982023 ID=MsG0580030055.01.T01:three_prime_utr;Parent=MsG0580030055.01.T01
Chr5 three_prime_UTR 105983307 105983329 105983307 ID=MsG0580030055.01.T01:three_prime_utr;Parent=MsG0580030055.01.T01
Gene Sequence

>MsG0580030055.01.T01

ATGACTGTAGGGGCAGGAATATCTGTTGCTGATGGAAACTTGATGGTGTTAGGGAAGAAGGTTCTGAGTCAGGTTCATGACAATGTTCTTGTTACTCCTGCTTCTGGTGGTTCTTTGATCAATGGTGCATTTCTTGGTGTTTCTTCTGATCAAAAGGGTAGTCGCAGAGTCTTTCCTATTGGCAAGCTTGAGGGGTTGAGATTTATGAGTCTTTTCCGCTTCAAAATGTGGTGGATGACTCAGAGAATGGGTAACTGTGGACAAGAAATCCCCTTTGAGACACAGTTTTTGCTTATTGAAGCACATAAGGGTCGTGATATTGACGGAGGGGTTGACGGTGGAGAAGAAGACCAAGATGGTTCTACCTACGCGGTTTTGTTACCTCTTTTGGAAGGAGATTTCAGGGCTGTTCTTCAAGGGAATGATCAAAATGAAATTGAGATTTGTGTCGAAAGTGGATGTCCTGATGTGGAGGAATTTGATGGGACTCATTTGGTGTTTATTGGGGCTGGATCAGATCCTTATGAAATCATAACAAATGCTGTCAAGACTGTTGAGAAACACTTGAAGACATTTTGTCATCGCGAGAGAAAGAAGATGCCAGATATGTTGAACTGGTTTGGATGGTGTACATGGGATGCTTTCTATACCAACGTCACTTCAGAGAATGTGAAAGAAGGATTACAAAGTTTTGAGGAAGGTGGAATTCCTGCTAAGTTTGTCATAATTGATGATGGATGGCAATCTGTTAGCATGGACCCCAATGGTGTTGAATGGAAACATGATTGTGCAGCAAAGCATGTGTATGTGTGGCACGCAATAACAGGATATTGGGGTGGTGTTAAACCTGGGATTAGTGGCATGGAACATTATGAGTCAAAGATGGCTTTCCCTATCTCATCTCCTGGAGTCAAGTCCAACCAACCAGATGAAGCATTAGATACCATTGCAATTAATGGACTCGGCCTTGTGAATCCTGAGAAAGTTTTTCACTTTTATGATGAACTCCACTCATATCTAGCATCCGCTGGTATTGATGGTGTCAAAGTTGATGTTCAGAATATCCTTGAAACTCTTGGAGCAGGACATGGTGGGAGGGTGAAACTTGCAAGGAAATATCATCAGGCATTGGAGGCATCGATCTCTAGGAACTTTCCTGATAACGGAATCATTTGCTGCATGAGTCACAATACAGACGGATTGTATAGTTCAAAGCGTTCGGCTGTTATTAGAGCTTCAGATGATTTCTGGCCAAGAGACCCTGCATCTCACACAATTCACATTGCATCGGTTGCTTACAATACTATTTTCCTTGGTGAATTTATGCAGCCAGATTGGGATATGTTTCATAGTCTTCATCCGATGGCTGAATATCATGCTGCTGCAAGAGCAGTTGGAGGATGTCCTATTTATGTCAGCGACAAGCCTGGACACCACGACTTCAATCTTTTGAAGAAGCTTGTACTTCCTGACGGTTCTATATTAAGAGCTAAACTTCCAGGAAGACCAACCAAGGATTGCTTATTTTCTGATCCTGCTAGAGATGGAAAGAGTCTCCTAAAGATATGGAACATGAATGACTATTCTGGAGTTGTTGGGGTATTCAATTGTCAAGGAGCTGGTTGGTGCAAAGTTGGAAAGAAGAACCTTATCCACGACGAGAATCCAGGCACAGTCACTGACATCATTAGGGCTAAAGATATCGACCATTTATCGACAGTGGCAGATGATAAATGGACAGGAGACGCCATCATATTTTCCCATCTTTGTGGTGAATTAGTCTATCTTCCAAAGGATGTTTCTATTCCAATTACCATGAAATCCCGAGAATATGAAGTTTTTACCATAGTCCCTGTGACGGAATTACCAAATGGCGTCAAATTTGCGCCTATTGGTTTAATCAAGATGTTCAATTCAGGAGGGGCTGTCAAAGAGTTCAGTTCTGGTTTTAATGGAACTGCAAATGTTTCCATGAAAGTGCGCGGGTGTGGCCTTTTCGGTGCTTATTCATCAGCTCGACCAAAGTTGATTACTGCTGATTCGGAAGAGGTGGAATTCAGTTACGAGGAAGAATCGGGATTGGTGACTATCAATTTGAGTGTGCCGGAGAAAGAGTTATATCAATGGAACATTTCTATTGATTTATAG
Protein sequence

>MsG0580030055.01.T01

MTVGAGISVADGNLMVLGKKVLSQVHDNVLVTPASGGSLINGAFLGVSSDQKGSRRVFPIGKLEGLRFMSLFRFKMWWMTQRMGNCGQEIPFETQFLLIEAHKGRDIDGGVDGGEEDQDGSTYAVLLPLLEGDFRAVLQGNDQNEIEICVESGCPDVEEFDGTHLVFIGAGSDPYEIITNAVKTVEKHLKTFCHRERKKMPDMLNWFGWCTWDAFYTNVTSENVKEGLQSFEEGGIPAKFVIIDDGWQSVSMDPNGVEWKHDCAAKHVYVWHAITGYWGGVKPGISGMEHYESKMAFPISSPGVKSNQPDEALDTIAINGLGLVNPEKVFHFYDELHSYLASAGIDGVKVDVQNILETLGAGHGGRVKLARKYHQALEASISRNFPDNGIICCMSHNTDGLYSSKRSAVIRASDDFWPRDPASHTIHIASVAYNTIFLGEFMQPDWDMFHSLHPMAEYHAAARAVGGCPIYVSDKPGHHDFNLLKKLVLPDGSILRAKLPGRPTKDCLFSDPARDGKSLLKIWNMNDYSGVVGVFNCQGAGWCKVGKKNLIHDENPGTVTDIIRAKDIDHLSTVADDKWTGDAIIFSHLCGELVYLPKDVSIPITMKSREYEVFTIVPVTELPNGVKFAPIGLIKMFNSGGAVKEFSSGFNGTANVSMKVRGCGLFGAYSSARPKLITADSEEVEFSYEEESGLVTINLSVPEKELYQWNISIDL*