AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580030201.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580030201.01.T01 MTR_5g098850 91.379 464 11 1 2 436 88 551 0.0 868
MsG0580030201.01.T01 MTR_6g036640 70.940 117 30 1 26 142 35 147 4.48e-51 169
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580030201.01.T01 AT1G24290 65.533 441 101 5 25 434 98 518 0.0 569

Find 104 sgRNAs with CRISPR-Local

Find 117 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATCAAGCTTGTCACTTTAT+AGG 0.182165 5:-108136897 MsG0580030201.01.T01:CDS
GACAACGTCGTCGAGTGTTC+TGG 0.236428 5:+108137854 None:intergenic
ATGCTAATGCAGCGATTTAT+TGG 0.246862 5:-108137040 MsG0580030201.01.T01:CDS
TGCGCAATGTGTTGCTTACT+TGG 0.277782 5:-108136850 MsG0580030201.01.T01:CDS
AAGGGTTCAAATTCCTTCAT+TGG 0.346086 5:-108136620 MsG0580030201.01.T01:CDS
TTCTTGCCACCCTCCCTTCA+AGG 0.349301 5:-108136639 MsG0580030201.01.T01:CDS
AGTTTGAAATTGTTGTTTCT+TGG 0.350745 5:+108137905 None:intergenic
CCCCACTTCCTTCATTAACT+TGG 0.361774 5:+108136713 None:intergenic
CTGTAAACAGCTATAGATTT+CGG 0.362795 5:+108136819 None:intergenic
TTGAATGTGTTGGAGATTGC+TGG 0.370493 5:-108137239 MsG0580030201.01.T01:CDS
TGGTTGGCGAGAATGTTAAA+AGG 0.374829 5:-108137020 MsG0580030201.01.T01:CDS
GCTGTTAATGATACTGAAAA+AGG 0.378886 5:-108137368 MsG0580030201.01.T01:CDS
ATACTACCATCTTCAATAAC+AGG 0.384653 5:+108137513 None:intergenic
TGCAAGTGAGGATGTTGGTT+TGG 0.392632 5:-108136955 MsG0580030201.01.T01:CDS
ATGTGTTGCTTACTTGGCTT+TGG 0.395104 5:-108136844 MsG0580030201.01.T01:CDS
AATTCCTTCATTGGCCTGAC+AGG 0.407385 5:-108136611 MsG0580030201.01.T01:CDS
AATTGTTGTTTCTTGGAAGT+TGG 0.437892 5:+108137912 None:intergenic
TTGGTGAAAAGTCTTGGTTT+TGG 0.440078 5:-108137344 MsG0580030201.01.T01:CDS
GAAGGAATTTGAACCCTTGA+AGG 0.440593 5:+108136625 None:intergenic
AAAGGCTTGGTGAAAAGTCT+TGG 0.447395 5:-108137350 MsG0580030201.01.T01:CDS
ACTTCCTTCATTAACTTGGT+TGG 0.448154 5:+108136717 None:intergenic
TGTTTGTTGATGAAGTTCAT+AGG 0.454394 5:-108137566 MsG0580030201.01.T01:CDS
AACTCAGAGGGATCCCTGTC+AGG 0.455296 5:+108136597 None:intergenic
CATCTTGCTTATGATAAAGC+TGG 0.460912 5:-108137116 MsG0580030201.01.T01:CDS
TGTGTTGCGGAAGGGTTGTC+AGG 0.462368 5:+108136666 None:intergenic
ATCCTCTTGTGGGGTCCACC+TGG 0.462690 5:-108137762 MsG0580030201.01.T01:CDS
TTGTGGGGTCCACCTGGTAC+AGG 0.466493 5:-108137756 MsG0580030201.01.T01:CDS
TCTTGCCACCCTCCCTTCAA+GGG 0.469243 5:-108136638 MsG0580030201.01.T01:CDS
CGCAAGAATCACATTACACT+CGG 0.469907 5:+108136869 None:intergenic
AGGGATCCCTCTGAGTTTGA+TGG 0.476891 5:-108136591 MsG0580030201.01.T01:CDS
TGTTAGTGTTGGTGAGGATG+TGG 0.477969 5:-108137306 MsG0580030201.01.T01:CDS
ATAGCTGTTTACAGAGCAAT+GGG 0.478186 5:-108136810 MsG0580030201.01.T01:CDS
TAATGAAGGAAGTGGGGTAT+GGG 0.480798 5:-108136707 MsG0580030201.01.T01:CDS
TCTACCTTCAATCCTCTTGT+GGG 0.481840 5:-108137772 MsG0580030201.01.T01:CDS
GTTGGTTTGAAGAAGAATGA+AGG 0.486779 5:+108137930 None:intergenic
GAAGGAAGTGGGGTATGGGA+AGG 0.487233 5:-108136703 MsG0580030201.01.T01:CDS
GGAATCCGTTGGACAGAATG+AGG 0.487456 5:-108136766 MsG0580030201.01.T01:CDS
GCATGATAGTGAAGAATGTC+AGG 0.488046 5:-108137192 MsG0580030201.01.T01:CDS
AACAATGGCTTTAGCAATGG+TGG 0.489275 5:+108137728 None:intergenic
TGTTGTTAGTGTTAGTGTTG+AGG 0.490246 5:-108137165 MsG0580030201.01.T01:CDS
ACAACGTCGTCGAGTGTTCT+GGG 0.490375 5:+108137855 None:intergenic
AAGGAAGTGGGGTATGGGAA+GGG 0.493175 5:-108136702 MsG0580030201.01.T01:CDS
ATCTTGCTTATGATAAAGCT+GGG 0.493583 5:-108137115 MsG0580030201.01.T01:CDS
TTAATGAAGGAAGTGGGGTA+TGG 0.494352 5:-108136708 MsG0580030201.01.T01:CDS
TAATGCAGCGATTTATTGGT+TGG 0.496165 5:-108137036 MsG0580030201.01.T01:CDS
GTGCATTGCACAAGTCTATG+AGG 0.501578 5:-108137070 MsG0580030201.01.T01:CDS
GTCTACCTTCAATCCTCTTG+TGG 0.505379 5:-108137773 MsG0580030201.01.T01:CDS
ACAGCTTGATTAAGAGCTAA+AGG 0.509274 5:+108136927 None:intergenic
AGCAATGGGAGCTGCTGAGA+AGG 0.512996 5:-108136796 MsG0580030201.01.T01:CDS
TTGAATTGATGAACGGAGAA+TGG 0.513459 5:+108137803 None:intergenic
GGACCCCACAAGAGGATTGA+AGG 0.521262 5:+108137768 None:intergenic
AGAACACTCGACGACGTTGT+CGG 0.525248 5:-108137852 MsG0580030201.01.T01:CDS
ACTTGTACGGTTTGCAAGTG+AGG 0.528191 5:-108136967 MsG0580030201.01.T01:CDS
GGTCGGAGTCGTTCGTACAA+TGG 0.529233 5:+108137876 None:intergenic
TGTAAAGTTGATGTTAGTGT+TGG 0.538076 5:-108137317 MsG0580030201.01.T01:CDS
TATAGCTGTTTACAGAGCAA+TGG 0.542502 5:-108136811 MsG0580030201.01.T01:CDS
GATCCCTGTCAGGCCAATGA+AGG 0.542771 5:+108136607 None:intergenic
AGTCTACGTGCAATATAAAG+TGG 0.543460 5:+108136987 None:intergenic
AACCAAGTTAATGAAGGAAG+TGG 0.546960 5:-108136715 MsG0580030201.01.T01:CDS
ATATTGCACGTAGACTTGTA+CGG 0.547448 5:-108136980 MsG0580030201.01.T01:CDS
AAGAAGCTCTGTGTTGCGGA+AGG 0.548710 5:+108136657 None:intergenic
ACCAAGTTAATGAAGGAAGT+GGG 0.552702 5:-108136714 MsG0580030201.01.T01:CDS
AGCTGCTGAGAAGGCCGTGA+GGG 0.552892 5:-108136787 MsG0580030201.01.T01:CDS
ATTAACAATGGCTTTAGCAA+TGG 0.553380 5:+108137725 None:intergenic
AATTTGAACCCTTGAAGGGA+GGG 0.557084 5:+108136630 None:intergenic
AAGGAATTTGAACCCTTGAA+GGG 0.558381 5:+108136626 None:intergenic
TGTTAATGCGGCTGCGCGAG+TGG 0.558473 5:-108137216 MsG0580030201.01.T01:CDS
ATTCCTTCATTGGCCTGACA+GGG 0.558922 5:-108136610 MsG0580030201.01.T01:CDS
TTTATAGCTAATAATTGCGA+TGG 0.565607 5:-108137278 MsG0580030201.01.T01:CDS
TGCATTGCACAAGTCTATGA+GGG 0.573396 5:-108137069 MsG0580030201.01.T01:CDS
TGCACCAACCAAGTTAATGA+AGG 0.573656 5:-108136721 MsG0580030201.01.T01:CDS
GAATCCGTTGGACAGAATGA+GGG 0.574333 5:-108136765 MsG0580030201.01.T01:CDS
TCGTGTTGCTTTGAATGTGT+TGG 0.574461 5:-108137249 MsG0580030201.01.T01:CDS
TAGTGTTGAGGATGCAAAAG+AGG 0.575989 5:-108137153 MsG0580030201.01.T01:CDS
TCTTTATCCGCGGTTACTAG+CGG 0.580233 5:-108137660 MsG0580030201.01.T01:CDS
GAGATGCTGTTGATGAAGCT+AGG 0.582264 5:-108137623 MsG0580030201.01.T01:CDS
GAATTTGAACCCTTGAAGGG+AGG 0.594352 5:+108136629 None:intergenic
TGGCAAGAAGCTCTGTGTTG+CGG 0.597041 5:+108136653 None:intergenic
GGTGCATTCCTGAGATGAAG+AGG 0.598885 5:+108136738 None:intergenic
TTTCATCCATCAAACTCAGA+GGG 0.599611 5:+108136585 None:intergenic
AGTTGATGTTAGTGTTGGTG+AGG 0.600260 5:-108137312 MsG0580030201.01.T01:CDS
TACCAGGTGGACCCCACAAG+AGG 0.606583 5:+108137760 None:intergenic
AATCCGTTGGACAGAATGAG+GGG 0.607734 5:-108136764 MsG0580030201.01.T01:CDS
CGTCGTCGAGTGTTCTGGGT+CGG 0.612446 5:+108137859 None:intergenic
CACGTTTGAGAAGCAAAATG+AGG 0.613835 5:+108137390 None:intergenic
TTGAACCCTTGAAGGGAGGG+TGG 0.616931 5:+108136633 None:intergenic
CGGTTTGCAAGTGAGGATGT+TGG 0.621056 5:-108136960 MsG0580030201.01.T01:CDS
AGAAGCTCTGTGTTGCGGAA+GGG 0.622645 5:+108136658 None:intergenic
TTGGCGAGAATGTTAAAAGG+AGG 0.626472 5:-108137017 MsG0580030201.01.T01:CDS
GTTTGCGTTGAATTGATGAA+CGG 0.626761 5:+108137796 None:intergenic
CTGTCCAACGGATTCCCTCA+CGG 0.633468 5:+108136773 None:intergenic
AAGGCCGTGAGGGAATCCGT+TGG 0.635897 5:-108136777 MsG0580030201.01.T01:CDS
TGTTGATGATGAATTAACAA+TGG 0.647174 5:+108137713 None:intergenic
CCAAGTTAATGAAGGAAGTG+GGG 0.647627 5:-108136713 MsG0580030201.01.T01:CDS
CTACCTTCAATCCTCTTGTG+GGG 0.658187 5:-108137771 MsG0580030201.01.T01:CDS
GGAGATTGCTGGTGTTAATG+CGG 0.659297 5:-108137228 MsG0580030201.01.T01:CDS
AGAAGCAAAATGAGGTGATG+TGG 0.663079 5:+108137398 None:intergenic
GAGCTGCTGAGAAGGCCGTG+AGG 0.682908 5:-108136788 MsG0580030201.01.T01:CDS
TTTAACACCGCTAGTAACCG+CGG 0.692384 5:+108137653 None:intergenic
TGATAGTGAAGAATGTCAGG+AGG 0.695754 5:-108137189 MsG0580030201.01.T01:CDS
GCATTGCACAAGTCTATGAG+GGG 0.696522 5:-108137068 MsG0580030201.01.T01:CDS
GCAAGAATCACATTACACTC+GGG 0.703980 5:+108136870 None:intergenic
TCTTGCTTATGATAAAGCTG+GGG 0.707009 5:-108137114 MsG0580030201.01.T01:CDS
ATCCGTTGGACAGAATGAGG+GGG 0.711621 5:-108136763 MsG0580030201.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! TTTATAGCTAATAATTGCGA+TGG - Chr5:108137269-108137288 MsG0580030201.01.T01:CDS 25.0%
!!! AGTTTGAAATTGTTGTTTCT+TGG + Chr5:108136645-108136664 None:intergenic 25.0%
!!! TGTTGATGATGAATTAACAA+TGG + Chr5:108136837-108136856 None:intergenic 25.0%
ATACTACCATCTTCAATAAC+AGG + Chr5:108137037-108137056 None:intergenic 30.0%
ATCTTGCTTATGATAAAGCT+GGG - Chr5:108137432-108137451 MsG0580030201.01.T01:intron 30.0%
CTGTAAACAGCTATAGATTT+CGG + Chr5:108137731-108137750 None:intergenic 30.0%
GCTGTTAATGATACTGAAAA+AGG - Chr5:108137179-108137198 MsG0580030201.01.T01:CDS 30.0%
TAATGATACTGAAAAAGGCT+TGG - Chr5:108137184-108137203 MsG0580030201.01.T01:CDS 30.0%
! TGTTTGTTGATGAAGTTCAT+AGG - Chr5:108136981-108137000 MsG0580030201.01.T01:CDS 30.0%
! TTTTTGCCTGTTATTGAAGA+TGG - Chr5:108137028-108137047 MsG0580030201.01.T01:CDS 30.0%
!! AATTGTTGTTTCTTGGAAGT+TGG + Chr5:108136638-108136657 None:intergenic 30.0%
!! ATTAACAATGGCTTTAGCAA+TGG + Chr5:108136825-108136844 None:intergenic 30.0%
!! TATCAAGCTTGTCACTTTAT+AGG - Chr5:108137650-108137669 MsG0580030201.01.T01:CDS 30.0%
!! TGTAAAGTTGATGTTAGTGT+TGG - Chr5:108137230-108137249 MsG0580030201.01.T01:CDS 30.0%
!!! GATGGTAGTATTGTTTTTGT+TGG - Chr5:108137046-108137065 MsG0580030201.01.T01:CDS 30.0%
AACCAAGTTAATGAAGGAAG+TGG - Chr5:108137832-108137851 MsG0580030201.01.T01:CDS 35.0%
AAGGAATTTGAACCCTTGAA+GGG + Chr5:108137924-108137943 None:intergenic 35.0%
AAGGGTTCAAATTCCTTCAT+TGG - Chr5:108137927-108137946 MsG0580030201.01.T01:CDS 35.0%
ACAGCTTGATTAAGAGCTAA+AGG + Chr5:108137623-108137642 None:intergenic 35.0%
ACCAAGTTAATGAAGGAAGT+GGG - Chr5:108137833-108137852 MsG0580030201.01.T01:CDS 35.0%
AGTCTACGTGCAATATAAAG+TGG + Chr5:108137563-108137582 None:intergenic 35.0%
ATAGCTGTTTACAGAGCAAT+GGG - Chr5:108137737-108137756 MsG0580030201.01.T01:CDS 35.0%
ATATTGCACGTAGACTTGTA+CGG - Chr5:108137567-108137586 MsG0580030201.01.T01:CDS 35.0%
ATGCTAATGCAGCGATTTAT+TGG - Chr5:108137507-108137526 MsG0580030201.01.T01:CDS 35.0%
CATCTTGCTTATGATAAAGC+TGG - Chr5:108137431-108137450 MsG0580030201.01.T01:intron 35.0%
GGGTGTAATCAAATGAAAAG+AGG + Chr5:108137087-108137106 None:intergenic 35.0%
GTTTGCGTTGAATTGATGAA+CGG + Chr5:108136754-108136773 None:intergenic 35.0%
TAATGCAGCGATTTATTGGT+TGG - Chr5:108137511-108137530 MsG0580030201.01.T01:CDS 35.0%
TATAGCTGTTTACAGAGCAA+TGG - Chr5:108137736-108137755 MsG0580030201.01.T01:CDS 35.0%
TCTTGCTTATGATAAAGCTG+GGG - Chr5:108137433-108137452 MsG0580030201.01.T01:intron 35.0%
TGTTGTTAGTGTTAGTGTTG+AGG - Chr5:108137382-108137401 MsG0580030201.01.T01:CDS 35.0%
TTGAATTGATGAACGGAGAA+TGG + Chr5:108136747-108136766 None:intergenic 35.0%
! ACTTCCTTCATTAACTTGGT+TGG + Chr5:108137833-108137852 None:intergenic 35.0%
! TTGGTGAAAAGTCTTGGTTT+TGG - Chr5:108137203-108137222 MsG0580030201.01.T01:CDS 35.0%
!! GTTGGTTTGAAGAAGAATGA+AGG + Chr5:108136620-108136639 None:intergenic 35.0%
!!! GAAGGTTTGTTTTGTTGTGT+TGG + Chr5:108136602-108136621 None:intergenic 35.0%
!!! TCGTTTTGTTTCTTTATCCG+CGG - Chr5:108136877-108136896 MsG0580030201.01.T01:CDS 35.0%
AATTTGAACCCTTGAAGGGA+GGG + Chr5:108137920-108137939 None:intergenic 40.0%
AGAAGCAAAATGAGGTGATG+TGG + Chr5:108137152-108137171 None:intergenic 40.0%
CACGTTTGAGAAGCAAAATG+AGG + Chr5:108137160-108137179 None:intergenic 40.0%
CCAAGTTAATGAAGGAAGTG+GGG - Chr5:108137834-108137853 MsG0580030201.01.T01:CDS 40.0%
CGCAAGAATCACATTACACT+CGG + Chr5:108137681-108137700 None:intergenic 40.0%
GAAGGAATTTGAACCCTTGA+AGG + Chr5:108137925-108137944 None:intergenic 40.0%
GCAAGAATCACATTACACTC+GGG + Chr5:108137680-108137699 None:intergenic 40.0%
TAATGAAGGAAGTGGGGTAT+GGG - Chr5:108137840-108137859 MsG0580030201.01.T01:CDS 40.0%
TCTACCTTCAATCCTCTTGT+GGG - Chr5:108136775-108136794 MsG0580030201.01.T01:CDS 40.0%
TGCACCAACCAAGTTAATGA+AGG - Chr5:108137826-108137845 MsG0580030201.01.T01:CDS 40.0%
TGCATTGCACAAGTCTATGA+GGG - Chr5:108137478-108137497 MsG0580030201.01.T01:intron 40.0%
TGGTTGGCGAGAATGTTAAA+AGG - Chr5:108137527-108137546 MsG0580030201.01.T01:CDS 40.0%
TTAATGAAGGAAGTGGGGTA+TGG - Chr5:108137839-108137858 MsG0580030201.01.T01:CDS 40.0%
TTGAATGTGTTGGAGATTGC+TGG - Chr5:108137308-108137327 MsG0580030201.01.T01:CDS 40.0%
TTGGCGAGAATGTTAAAAGG+AGG - Chr5:108137530-108137549 MsG0580030201.01.T01:CDS 40.0%
! GCATGATAGTGAAGAATGTC+AGG - Chr5:108137355-108137374 MsG0580030201.01.T01:CDS 40.0%
! TAGTGTTGAGGATGCAAAAG+AGG - Chr5:108137394-108137413 MsG0580030201.01.T01:CDS 40.0%
! TGATAGTGAAGAATGTCAGG+AGG - Chr5:108137358-108137377 MsG0580030201.01.T01:CDS 40.0%
!! AAAGGCTTGGTGAAAAGTCT+TGG - Chr5:108137197-108137216 MsG0580030201.01.T01:CDS 40.0%
!! AACAATGGCTTTAGCAATGG+TGG + Chr5:108136822-108136841 None:intergenic 40.0%
!! AGTTGATGTTAGTGTTGGTG+AGG - Chr5:108137235-108137254 MsG0580030201.01.T01:CDS 40.0%
!! ATGTGTTGCTTACTTGGCTT+TGG - Chr5:108137703-108137722 MsG0580030201.01.T01:CDS 40.0%
!! TCGTGTTGCTTTGAATGTGT+TGG - Chr5:108137298-108137317 MsG0580030201.01.T01:CDS 40.0%
AATCCGTTGGACAGAATGAG+GGG - Chr5:108137783-108137802 MsG0580030201.01.T01:CDS 45.0%
ACTTGTACGGTTTGCAAGTG+AGG - Chr5:108137580-108137599 MsG0580030201.01.T01:CDS 45.0%
CCCCACTTCCTTCATTAACT+TGG + Chr5:108137837-108137856 None:intergenic 45.0%
CTACCTTCAATCCTCTTGTG+GGG - Chr5:108136776-108136795 MsG0580030201.01.T01:CDS 45.0%
GAATCCGTTGGACAGAATGA+GGG - Chr5:108137782-108137801 MsG0580030201.01.T01:CDS 45.0%
GAATTTGAACCCTTGAAGGG+AGG + Chr5:108137921-108137940 None:intergenic 45.0%
GCATTGCACAAGTCTATGAG+GGG - Chr5:108137479-108137498 MsG0580030201.01.T01:intron 45.0%
GTCTACCTTCAATCCTCTTG+TGG - Chr5:108136774-108136793 MsG0580030201.01.T01:CDS 45.0%
GTGCATTGCACAAGTCTATG+AGG - Chr5:108137477-108137496 MsG0580030201.01.T01:intron 45.0%
TCTTTATCCGCGGTTACTAG+CGG - Chr5:108136887-108136906 MsG0580030201.01.T01:CDS 45.0%
TTTAACACCGCTAGTAACCG+CGG + Chr5:108136897-108136916 None:intergenic 45.0%
! AATTCCTTCATTGGCCTGAC+AGG - Chr5:108137936-108137955 MsG0580030201.01.T01:CDS 45.0%
! ATTCCTTCATTGGCCTGACA+GGG - Chr5:108137937-108137956 MsG0580030201.01.T01:CDS 45.0%
! GAGATGCTGTTGATGAAGCT+AGG - Chr5:108136924-108136943 MsG0580030201.01.T01:CDS 45.0%
! GGAGATTGCTGGTGTTAATG+CGG - Chr5:108137319-108137338 MsG0580030201.01.T01:CDS 45.0%
! TGCAAGTGAGGATGTTGGTT+TGG - Chr5:108137592-108137611 MsG0580030201.01.T01:CDS 45.0%
!! ATGGTGGTTTTACCTGTACC+AGG + Chr5:108136806-108136825 None:intergenic 45.0%
!! TGCGCAATGTGTTGCTTACT+TGG - Chr5:108137697-108137716 MsG0580030201.01.T01:CDS 45.0%
!! TGTTAGTGTTGGTGAGGATG+TGG - Chr5:108137241-108137260 MsG0580030201.01.T01:CDS 45.0%
AACACGACAACGCGACAACA+AGG + Chr5:108137108-108137127 None:intergenic 50.0%
AAGAAGCTCTGTGTTGCGGA+AGG + Chr5:108137893-108137912 None:intergenic 50.0%
AAGGAAGTGGGGTATGGGAA+GGG - Chr5:108137845-108137864 MsG0580030201.01.T01:CDS 50.0%
ACAACGTCGTCGAGTGTTCT+GGG + Chr5:108136695-108136714 None:intergenic 50.0%
ACACGACAACGCGACAACAA+GGG + Chr5:108137107-108137126 None:intergenic 50.0%
AGAACACTCGACGACGTTGT+CGG - Chr5:108136695-108136714 MsG0580030201.01.T01:CDS 50.0%
AGAAGCTCTGTGTTGCGGAA+GGG + Chr5:108137892-108137911 None:intergenic 50.0%
AGGGATCCCTCTGAGTTTGA+TGG - Chr5:108137956-108137975 MsG0580030201.01.T01:CDS 50.0%
ATCCGTTGGACAGAATGAGG+GGG - Chr5:108137784-108137803 MsG0580030201.01.T01:CDS 50.0%
ATGAGGTGATGTGGCTGAAG+AGG + Chr5:108137143-108137162 None:intergenic 50.0%
CGGTTTGCAAGTGAGGATGT+TGG - Chr5:108137587-108137606 MsG0580030201.01.T01:CDS 50.0%
GGAATCCGTTGGACAGAATG+AGG - Chr5:108137781-108137800 MsG0580030201.01.T01:CDS 50.0%
GGTGCATTCCTGAGATGAAG+AGG + Chr5:108137812-108137831 None:intergenic 50.0%
TGAGGTGATGTGGCTGAAGA+GGG + Chr5:108137142-108137161 None:intergenic 50.0%
TGGCAAGAAGCTCTGTGTTG+CGG + Chr5:108137897-108137916 None:intergenic 50.0%
!! GTGGTTTTACCTGTACCAGG+TGG + Chr5:108136803-108136822 None:intergenic 50.0%
AACTCAGAGGGATCCCTGTC+AGG + Chr5:108137953-108137972 None:intergenic 55.0%
AGCAATGGGAGCTGCTGAGA+AGG - Chr5:108137751-108137770 MsG0580030201.01.T01:CDS 55.0%
CACCCCCTCATTCTGTCCAA+CGG + Chr5:108137789-108137808 None:intergenic 55.0%
GAAGGAAGTGGGGTATGGGA+AGG - Chr5:108137844-108137863 MsG0580030201.01.T01:CDS 55.0%
GACAACGTCGTCGAGTGTTC+TGG + Chr5:108136696-108136715 None:intergenic 55.0%
GATCCCTGTCAGGCCAATGA+AGG + Chr5:108137943-108137962 None:intergenic 55.0%
GGACCCCACAAGAGGATTGA+AGG + Chr5:108136782-108136801 None:intergenic 55.0%
GGTCGGAGTCGTTCGTACAA+TGG + Chr5:108136674-108136693 None:intergenic 55.0%
TCTTGCCACCCTCCCTTCAA+GGG - Chr5:108137909-108137928 MsG0580030201.01.T01:CDS 55.0%
TGTGTTGCGGAAGGGTTGTC+AGG + Chr5:108137884-108137903 None:intergenic 55.0%
TTCTTGCCACCCTCCCTTCA+AGG - Chr5:108137908-108137927 MsG0580030201.01.T01:CDS 55.0%
TTGAACCCTTGAAGGGAGGG+TGG + Chr5:108137917-108137936 None:intergenic 55.0%
! CTGTCCAACGGATTCCCTCA+CGG + Chr5:108137777-108137796 None:intergenic 55.0%
AAGGCCGTGAGGGAATCCGT+TGG - Chr5:108137770-108137789 MsG0580030201.01.T01:CDS 60.0%
AGCTGCTGAGAAGGCCGTGA+GGG - Chr5:108137760-108137779 MsG0580030201.01.T01:CDS 60.0%
ATCCTCTTGTGGGGTCCACC+TGG - Chr5:108136785-108136804 MsG0580030201.01.T01:CDS 60.0%
TACCAGGTGGACCCCACAAG+AGG + Chr5:108136790-108136809 None:intergenic 60.0%
TGTTAATGCGGCTGCGCGAG+TGG - Chr5:108137331-108137350 MsG0580030201.01.T01:CDS 60.0%
TTGTGGGGTCCACCTGGTAC+AGG - Chr5:108136791-108136810 MsG0580030201.01.T01:CDS 60.0%
! CGTCGTCGAGTGTTCTGGGT+CGG + Chr5:108136691-108136710 None:intergenic 60.0%
!! AGGGGGTGCCTCTTCATCTC+AGG - Chr5:108137801-108137820 MsG0580030201.01.T01:CDS 60.0%
GAGCTGCTGAGAAGGCCGTG+AGG - Chr5:108137759-108137778 MsG0580030201.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr5 gene 108136587 108137982 108136587 ID=MsG0580030201.01;Name=MsG0580030201.01
Chr5 mRNA 108136587 108137982 108136587 ID=MsG0580030201.01.T01;Parent=MsG0580030201.01;Name=MsG0580030201.01.T01;_AED=0.27;_eAED=0.28;_QI=0|0|0|1|1|1|2|0|436
Chr5 exon 108137506 108137982 108137506 ID=MsG0580030201.01.T01:exon:15247;Parent=MsG0580030201.01.T01
Chr5 exon 108136587 108137420 108136587 ID=MsG0580030201.01.T01:exon:15246;Parent=MsG0580030201.01.T01
Chr5 CDS 108137506 108137982 108137506 ID=MsG0580030201.01.T01:cds;Parent=MsG0580030201.01.T01
Chr5 CDS 108136587 108137420 108136587 ID=MsG0580030201.01.T01:cds;Parent=MsG0580030201.01.T01
Gene Sequence

>MsG0580030201.01.T01

ATGAAGCATTCACCAACACAACAAAACAAACCTTCATTCTTCTTCAAACCAACTTCCAAGAAACAACAATTTCAAACTCATGAACCATTGTACGAACGACTCCGACCCAGAACACTCGACGACGTTGTCGGACAAGATCATCTCTTATCATCAAACTCCATTCTCCGTTCATCAATTCAACGCAAACGTCTACCTTCAATCCTCTTGTGGGGTCCACCTGGTACAGGTAAAACCACCATTGCTAAAGCCATTGTTAATTCATCATCAACAACTAAAGATTCAGCTTTGTATCGTTTTGTTTCTTTATCCGCGGTTACTAGCGGTGTTAAAGATGTTAGAGATGCTGTTGATGAAGCTAGGAAAGTTAGAGTTAAAACAAATCAAACTACTGTTTTGTTTGTTGATGAAGTTCATAGGTTTAATAAATCTCAACAAGATTCGTTTTTGCCTGTTATTGAAGATGGTAGTATTGTTTTTCCACATCACCTCATTTTGCTTCTCAAACGTGCTGTTAATGATACTGAAAAAGGCTTGGTGAAAAGTCTTGGTTTTGGTTCTTGTAAAGTTGATGTTAGTGTTGGTGAGGATGTGGTTGATTTTATAGCTAATAATTGCGATGGTGATGCTCGTGTTGCTTTGAATGTGTTGGAGATTGCTGGTGTTAATGCGGCTGCGCGAGTGGAGCATGATAGTGAAGAATGTCAGGAGGTTGTTGTTAGTGTTAGTGTTGAGGATGCAAAAGAGGCGCTTCAATGCAAGCATCTTGCTTATGATAAAGCTGGGGAAGAGCACTATAATTTGATTAGTGCATTGCACAAGTCTATGAGGGGAAGCGATGCTAATGCAGCGATTTATTGGTTGGCGAGAATGTTAAAAGGAGGTGAAGAACCACTTTATATTGCACGTAGACTTGTACGGTTTGCAAGTGAGGATGTTGGTTTGGCTGATCCTTTAGCTCTTAATCAAGCTGTTTCGTGTTATCAAGCTTGTCACTTTATAGGAATGCCCGAGTGTAATGTGATTCTTGCGCAATGTGTTGCTTACTTGGCTTTGGCTCCGAAATCTATAGCTGTTTACAGAGCAATGGGAGCTGCTGAGAAGGCCGTGAGGGAATCCGTTGGACAGAATGAGGGGGTGCCTCTTCATCTCAGGAATGCACCAACCAAGTTAATGAAGGAAGTGGGGTATGGGAAGGGATACATATATACTCCTGACAACCCTTCCGCAACACAGAGCTTCTTGCCACCCTCCCTTCAAGGGTTCAAATTCCTTCATTGGCCTGACAGGGATCCCTCTGAGTTTGATGGATGA
Protein sequence

>MsG0580030201.01.T01

MKHSPTQQNKPSFFFKPTSKKQQFQTHEPLYERLRPRTLDDVVGQDHLLSSNSILRSSIQRKRLPSILLWGPPGTGKTTIAKAIVNSSSTTKDSALYRFVSLSAVTSGVKDVRDAVDEARKVRVKTNQTTVLFVDEVHRFNKSQQDSFLPVIEDGSIVFPHHLILLLKRAVNDTEKGLVKSLGFGSCKVDVSVGEDVVDFIANNCDGDARVALNVLEIAGVNAAARVEHDSEECQEVVVSVSVEDAKEALQCKHLAYDKAGEEHYNLISALHKSMRGSDANAAIYWLARMLKGGEEPLYIARRLVRFASEDVGLADPLALNQAVSCYQACHFIGMPECNVILAQCVAYLALAPKSIAVYRAMGAAEKAVRESVGQNEGVPLHLRNAPTKLMKEVGYGKGYIYTPDNPSATQSFLPPSLQGFKFLHWPDRDPSEFDG*