AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680030469.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680030469.01.T01 MTR_6g007603 86.250 160 0 1 1 160 1 138 2.40e-89 271
MsG0680030469.01.T01 MTR_6g007603 88.889 144 6 2 166 299 210 353 2.33e-85 261
MsG0680030469.01.T01 MTR_3g078110 82.517 143 15 3 167 299 199 341 3.06e-79 245
MsG0680030469.01.T01 MTR_3g078110 51.634 153 44 3 8 160 4 126 3.33e-45 157
MsG0680030469.01.T01 MTR_4g106980 81.818 143 16 3 167 299 228 370 8.09e-79 245
MsG0680030469.01.T01 MTR_4g106980 54.545 176 40 4 3 160 2 155 1.37e-51 174
MsG0680030469.01.T01 MTR_5g006560 74.126 143 27 3 167 299 226 368 8.01e-70 221
MsG0680030469.01.T01 MTR_5g006560 41.860 172 55 3 11 178 41 171 1.10e-30 119
MsG0680030469.01.T01 MTR_5g006560 74.126 143 27 3 167 299 260 402 3.17e-69 221
MsG0680030469.01.T01 MTR_5g006560 44.667 150 42 2 11 160 75 183 1.51e-30 119
MsG0680030469.01.T01 MTR_1g103270 40.673 327 153 10 11 299 37 360 1.61e-62 202
MsG0680030469.01.T01 MTR_4g106980 54.545 176 40 4 3 160 2 155 1.15e-52 176
MsG0680030469.01.T01 MTR_4g106980 81.633 98 13 2 167 259 228 325 2.45e-50 169
MsG0680030469.01.T01 MTR_3g034100 30.820 305 123 8 53 296 63 340 2.22e-37 136
MsG0680030469.01.T01 MTR_8g100085 29.747 316 134 9 42 296 103 391 2.51e-35 132
MsG0680030469.01.T01 MTR_2g013900 30.435 276 148 8 63 298 152 423 7.47e-29 115
MsG0680030469.01.T01 MTR_4g088745 27.545 334 148 9 26 298 6 306 1.68e-28 112
MsG0680030469.01.T01 MTR_4g088750 29.577 284 140 8 63 298 191 462 2.67e-28 114
MsG0680030469.01.T01 MTR_5g023150 28.947 266 148 8 65 295 191 450 7.66e-28 112
MsG0680030469.01.T01 MTR_5g023150 28.947 266 148 8 65 295 288 547 1.15e-27 112
MsG0680030469.01.T01 MTR_1g099110 29.930 284 109 8 64 288 258 510 2.21e-27 111
MsG0680030469.01.T01 MTR_1g099110 29.930 284 109 8 64 288 275 527 2.75e-27 111
MsG0680030469.01.T01 MTR_3g078000 30.657 274 148 8 63 298 48 317 5.18e-27 108
MsG0680030469.01.T01 MTR_1g026160 29.110 292 166 9 39 296 114 398 5.49e-27 109
MsG0680030469.01.T01 MTR_4g088755 28.041 296 127 7 64 298 31 301 1.55e-26 107
MsG0680030469.01.T01 MTR_4g132860 28.571 280 146 11 61 296 69 338 4.51e-25 103
MsG0680030469.01.T01 MTR_4g105770 29.259 270 149 9 62 293 48 313 1.22e-24 102
MsG0680030469.01.T01 MTR_1g113960 27.820 266 151 9 65 295 294 553 2.95e-24 102
MsG0680030469.01.T01 MTR_1g113960 27.820 266 151 9 65 295 294 553 3.31e-24 102
MsG0680030469.01.T01 MTR_3g114900 39.130 138 71 4 169 295 387 522 3.87e-23 99.8
MsG0680030469.01.T01 MTR_3g104900 27.241 290 150 11 65 300 163 445 2.75e-22 96.7
MsG0680030469.01.T01 MTR_1g061190 28.102 274 135 8 70 295 553 812 1.22e-21 95.5
MsG0680030469.01.T01 MTR_1g050690 28.283 297 164 10 45 295 381 674 1.91e-21 94.7
MsG0680030469.01.T01 MTR_6g004440 29.457 258 126 9 64 292 18 248 2.96e-21 92.0
MsG0680030469.01.T01 MTR_7g072710 28.571 294 115 12 67 292 40 306 5.40e-21 92.0
MsG0680030469.01.T01 MTR_8g107000 26.531 294 169 10 44 295 696 984 7.06e-21 93.6
MsG0680030469.01.T01 MTR_7g072710 38.462 143 68 6 169 292 128 269 6.75e-20 88.6
MsG0680030469.01.T01 MTR_5g066490 28.231 294 117 10 66 295 640 903 1.30e-19 89.7
MsG0680030469.01.T01 MTR_6g079540 34.058 138 79 3 169 295 531 667 3.27e-19 88.2
MsG0680030469.01.T01 MTR_6g079540 34.058 138 79 3 169 295 779 915 3.58e-19 88.2
MsG0680030469.01.T01 MTR_1g016300 26.336 262 159 7 64 292 655 915 1.01e-18 87.0
MsG0680030469.01.T01 MTR_1g026160 29.911 224 122 7 65 259 139 356 1.01e-18 85.5
MsG0680030469.01.T01 MTR_1g026160 29.911 224 122 7 65 259 137 354 1.35e-18 85.1
MsG0680030469.01.T01 MTR_1g026160 29.911 224 122 7 65 259 284 501 1.40e-18 86.3
MsG0680030469.01.T01 MTR_1g081790 26.493 268 157 8 64 295 681 944 1.81e-18 86.3
MsG0680030469.01.T01 MTR_1g026160 30.045 223 121 7 65 258 139 355 2.54e-18 84.7
MsG0680030469.01.T01 MTR_1g026160 30.045 223 121 7 65 258 137 353 2.71e-18 84.7
MsG0680030469.01.T01 MTR_1g026160 30.045 223 121 7 65 258 284 500 3.11e-18 85.1
MsG0680030469.01.T01 MTR_2g092980 24.913 289 127 8 63 292 548 805 5.01e-18 84.7
MsG0680030469.01.T01 MTR_2g092980 24.913 289 127 8 63 292 529 786 5.20e-18 84.7
MsG0680030469.01.T01 MTR_2g092980 24.913 289 127 8 63 292 512 769 5.21e-18 84.7
MsG0680030469.01.T01 MTR_2g092980 24.913 289 127 8 63 292 493 750 6.10e-18 84.7
MsG0680030469.01.T01 MTR_3g100090 27.500 280 151 9 66 302 647 917 6.35e-18 84.7
MsG0680030469.01.T01 MTR_5g010730 25.275 273 159 8 66 300 417 682 7.92e-18 84.3
MsG0680030469.01.T01 MTR_5g010730 25.275 273 159 8 66 300 472 737 1.71e-17 83.2
MsG0680030469.01.T01 MTR_2g034020 33.333 141 76 4 169 295 585 721 5.75e-17 81.6
MsG0680030469.01.T01 MTR_8g442400 26.374 273 148 12 78 302 1392 1659 5.09e-16 79.0
MsG0680030469.01.T01 MTR_3g076970 35.211 142 73 5 169 292 146 286 7.32e-16 77.4
MsG0680030469.01.T01 MTR_4g116520 26.119 268 151 10 76 298 1096 1361 2.63e-15 77.0
MsG0680030469.01.T01 MTR_4g080030 32.374 139 84 5 168 298 665 801 2.85e-15 76.6
MsG0680030469.01.T01 MTR_1g081790 27.016 248 141 8 64 275 681 924 3.51e-15 76.3
MsG0680030469.01.T01 MTR_2g461180 26.236 263 147 10 78 295 1133 1393 3.55e-15 76.6
MsG0680030469.01.T01 MTR_1g090020 29.615 260 136 12 78 292 906 1163 4.40e-15 76.3
MsG0680030469.01.T01 MTR_2g072520 35.000 160 74 8 169 300 146 303 4.93e-15 74.3
MsG0680030469.01.T01 MTR_4g122160 34.884 129 66 5 169 283 579 703 1.22e-14 74.7
MsG0680030469.01.T01 MTR_1g026160 29.851 201 106 7 65 236 137 331 1.99e-14 73.2
MsG0680030469.01.T01 MTR_4g128650 28.148 270 139 12 78 298 817 1080 2.40e-14 73.9
MsG0680030469.01.T01 MTR_7g033135 33.974 156 77 5 166 296 433 587 1.15e-13 71.6
MsG0680030469.01.T01 MTR_2g103950 32.911 158 80 4 169 300 162 319 3.80e-13 69.3
MsG0680030469.01.T01 MTR_1g050520 29.310 174 80 4 169 299 146 319 9.78e-13 68.9
MsG0680030469.01.T01 MTR_2g082430 30.000 150 86 5 169 299 232 381 9.83e-13 68.6
MsG0680030469.01.T01 MTR_4g069970 30.968 155 81 4 168 296 261 415 1.90e-12 67.8
MsG0680030469.01.T01 MTR_3g465590 23.827 277 147 10 63 292 321 580 2.85e-12 67.4
MsG0680030469.01.T01 MTR_4g069970 30.968 155 81 4 168 296 261 415 2.85e-12 67.4
MsG0680030469.01.T01 MTR_3g047890 30.719 153 80 4 168 294 302 454 6.42e-12 66.2
MsG0680030469.01.T01 MTR_2g031530 30.323 155 82 2 167 295 515 669 6.78e-12 66.2
MsG0680030469.01.T01 MTR_5g091880 28.472 144 86 3 169 295 284 427 7.97e-12 65.9
MsG0680030469.01.T01 MTR_1g110130 27.500 280 135 15 78 297 295 566 9.99e-12 65.9
MsG0680030469.01.T01 MTR_5g017080 30.769 156 82 5 168 297 288 443 1.03e-11 65.5
MsG0680030469.01.T01 MTR_6g083080 96.552 29 1 0 1 29 1 29 1.26e-11 61.2
MsG0680030469.01.T01 MTR_1g105700 23.695 249 139 7 32 238 321 560 1.38e-11 65.5
MsG0680030469.01.T01 MTR_7g079350 31.138 167 83 6 158 295 472 635 1.74e-11 65.1
MsG0680030469.01.T01 MTR_1g010260 31.915 141 70 5 169 295 545 673 3.20e-11 64.3
MsG0680030469.01.T01 MTR_5g075060 26.490 151 100 3 149 288 110 260 3.32e-11 63.9
MsG0680030469.01.T01 MTR_8g088590 23.448 290 142 9 57 295 179 439 3.39e-11 63.9
MsG0680030469.01.T01 MTR_1g010240 31.915 141 70 5 169 295 459 587 4.16e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680030469.01.T01 AT5G50000 54.294 361 92 9 8 299 7 363 1.51e-115 338
MsG0680030469.01.T01 AT5G50000 49.367 316 92 8 8 259 7 318 1.38e-82 252
MsG0680030469.01.T01 AT3G01490 83.217 143 14 2 167 299 247 389 4.52e-79 246
MsG0680030469.01.T01 AT3G01490 53.023 215 37 5 2 178 3 191 2.17e-57 190
MsG0680030469.01.T01 AT3G22750 72.028 143 30 3 167 299 214 356 4.23e-70 222
MsG0680030469.01.T01 AT3G22750 43.429 175 51 4 11 180 32 163 6.18e-34 127
MsG0680030469.01.T01 AT4G14780 69.930 143 33 2 167 299 200 342 2.01e-66 212
MsG0680030469.01.T01 AT4G14780 43.373 166 46 4 2 160 3 127 1.36e-31 121
MsG0680030469.01.T01 AT3G63260 68.531 143 35 3 167 299 227 369 5.44e-66 212
MsG0680030469.01.T01 AT3G63260 40.789 152 52 3 9 160 36 149 6.65e-25 103
MsG0680030469.01.T01 AT3G01490 53.023 215 37 5 2 178 3 191 2.38e-58 191
MsG0680030469.01.T01 AT3G01490 83.673 98 11 1 167 259 247 344 5.52e-51 172
MsG0680030469.01.T01 AT3G63260 69.697 99 25 2 167 260 227 325 1.48e-42 149
MsG0680030469.01.T01 AT3G63260 40.789 152 52 3 9 160 36 149 2.96e-25 103
MsG0680030469.01.T01 AT4G31170 31.561 301 112 9 61 297 120 390 4.14e-37 137
MsG0680030469.01.T01 AT4G31170 31.561 301 112 9 61 297 120 390 4.14e-37 137
MsG0680030469.01.T01 AT4G31170 31.561 301 112 9 61 297 120 390 4.14e-37 137
MsG0680030469.01.T01 AT4G31170 31.561 301 112 9 61 297 120 390 4.14e-37 137
MsG0680030469.01.T01 AT4G31170 31.561 301 112 9 61 297 120 390 4.14e-37 137
MsG0680030469.01.T01 AT4G31170 31.561 301 112 9 61 297 120 390 4.14e-37 137
MsG0680030469.01.T01 AT4G31170 31.561 301 112 9 61 297 120 390 4.14e-37 137
MsG0680030469.01.T01 AT2G24360 33.696 276 139 9 61 297 119 389 3.76e-36 134
MsG0680030469.01.T01 AT2G17700 30.483 269 152 10 59 295 273 538 1.14e-28 115
MsG0680030469.01.T01 AT1G62400 26.567 335 148 9 29 296 41 344 7.83e-26 105
MsG0680030469.01.T01 AT3G46930 29.412 289 154 10 52 298 146 426 1.29e-25 106
MsG0680030469.01.T01 AT3G46930 29.412 289 154 10 52 298 181 461 2.57e-25 105
MsG0680030469.01.T01 AT5G58950 28.467 274 156 6 63 298 198 469 6.59e-25 104
MsG0680030469.01.T01 AT4G35780 27.609 297 124 10 59 295 279 544 6.51e-24 102
MsG0680030469.01.T01 AT4G38470 25.152 330 148 11 29 295 249 542 6.30e-23 99.0
MsG0680030469.01.T01 AT4G38470 25.152 330 148 11 29 295 249 542 6.48e-23 99.0
MsG0680030469.01.T01 AT5G03730 28.159 277 137 8 72 300 551 813 7.06e-21 93.2
MsG0680030469.01.T01 AT5G03730 28.159 277 137 8 72 300 551 813 7.06e-21 93.2
MsG0680030469.01.T01 AT4G23050 26.923 286 170 7 48 295 439 723 1.53e-20 92.4
MsG0680030469.01.T01 AT4G23050 26.923 286 170 7 48 295 438 722 1.56e-20 92.4
MsG0680030469.01.T01 AT5G01850 26.531 294 121 12 67 292 13 279 2.10e-20 90.1
MsG0680030469.01.T01 AT5G01850 37.063 143 70 6 169 292 162 303 2.52e-20 90.1
MsG0680030469.01.T01 AT5G50180 29.329 283 150 12 55 292 3 280 3.11e-20 89.7
MsG0680030469.01.T01 AT3G27560 26.230 305 131 9 55 292 9 286 4.37e-20 89.7
MsG0680030469.01.T01 AT1G18160 25.170 294 176 8 43 295 680 970 1.25e-19 89.7
MsG0680030469.01.T01 AT4G24480 28.214 280 149 8 66 302 663 933 1.94e-19 89.4
MsG0680030469.01.T01 AT4G24480 28.214 280 149 8 66 302 663 933 2.38e-19 89.0
MsG0680030469.01.T01 AT1G73660 26.370 292 173 9 43 295 715 1003 4.07e-19 88.2
MsG0680030469.01.T01 AT5G11850 26.792 265 160 7 64 295 601 864 1.03e-18 87.0
MsG0680030469.01.T01 AT4G24480 27.798 277 159 7 66 302 663 938 1.28e-18 86.7
MsG0680030469.01.T01 AT5G40540 25.676 296 126 9 64 292 18 286 2.22e-18 84.7
MsG0680030469.01.T01 AT3G58640 25.260 289 126 9 63 292 544 801 4.95e-18 85.1
MsG0680030469.01.T01 AT3G58640 25.260 289 126 9 63 292 544 801 4.95e-18 85.1
MsG0680030469.01.T01 AT3G46920 28.195 266 142 10 78 297 878 1140 5.53e-18 84.7
MsG0680030469.01.T01 AT3G46920 28.195 266 142 10 78 297 812 1074 5.61e-18 84.7
MsG0680030469.01.T01 AT3G24715 28.889 270 135 12 76 295 840 1102 7.82e-18 84.3
MsG0680030469.01.T01 AT3G24715 28.889 270 135 12 76 295 840 1102 7.82e-18 84.3
MsG0680030469.01.T01 AT3G24715 28.889 270 135 12 76 295 840 1102 7.82e-18 84.3
MsG0680030469.01.T01 AT5G49470 33.333 141 76 5 169 295 323 459 8.24e-18 84.0
MsG0680030469.01.T01 AT5G49470 33.333 141 76 5 169 295 610 746 9.08e-18 84.0
MsG0680030469.01.T01 AT5G49470 33.333 141 76 5 169 295 483 619 1.44e-17 83.6
MsG0680030469.01.T01 AT5G49470 33.333 141 76 5 169 295 671 807 1.62e-17 83.6
MsG0680030469.01.T01 AT5G49470 33.333 141 76 5 169 295 584 720 1.66e-17 83.2
MsG0680030469.01.T01 AT5G40540 34.463 177 92 8 136 292 17 189 3.66e-17 79.7
MsG0680030469.01.T01 AT5G40540 34.463 177 92 8 136 292 38 210 5.78e-17 79.7
MsG0680030469.01.T01 AT1G08720 30.935 139 84 3 169 296 788 925 1.05e-16 80.9
MsG0680030469.01.T01 AT4G38470 24.913 289 123 10 29 259 249 501 2.06e-16 79.7
MsG0680030469.01.T01 AT1G16270 33.557 149 80 6 167 298 986 1132 2.25e-16 80.1
MsG0680030469.01.T01 AT1G16270 33.557 149 80 6 167 298 986 1132 2.25e-16 80.1
MsG0680030469.01.T01 AT1G16270 33.557 149 80 6 167 298 986 1132 2.25e-16 80.1
MsG0680030469.01.T01 AT1G67890 32.609 138 80 4 169 295 606 741 2.38e-16 79.7
MsG0680030469.01.T01 AT1G18160 25.182 274 161 8 43 275 680 950 4.38e-16 79.3
MsG0680030469.01.T01 AT3G50730 32.639 144 74 5 169 292 156 296 4.49e-16 78.2
MsG0680030469.01.T01 AT1G04700 29.278 263 139 12 78 295 772 1032 6.03e-16 79.0
MsG0680030469.01.T01 AT1G04700 29.278 263 139 12 78 295 772 1032 6.03e-16 79.0
MsG0680030469.01.T01 AT3G46930 28.163 245 131 9 52 259 85 321 1.27e-15 76.6
MsG0680030469.01.T01 AT3G46930 28.163 245 131 9 52 259 146 382 2.52e-15 76.3
MsG0680030469.01.T01 AT3G46930 28.163 245 131 9 52 259 181 417 3.10e-15 76.3
MsG0680030469.01.T01 AT3G46930 28.163 245 131 9 52 259 181 417 3.11e-15 75.9
MsG0680030469.01.T01 AT2G35050 29.801 151 87 5 167 300 1096 1244 4.89e-15 76.3
MsG0680030469.01.T01 AT2G35050 29.801 151 87 5 167 300 1096 1244 4.89e-15 76.3
MsG0680030469.01.T01 AT3G06620 31.852 135 80 3 169 292 613 746 6.10e-15 75.5
MsG0680030469.01.T01 AT5G66710 34.043 141 74 5 169 292 192 330 7.64e-15 74.7
MsG0680030469.01.T01 AT3G06640 30.882 136 80 4 169 292 565 698 1.44e-14 74.7
MsG0680030469.01.T01 AT3G06640 30.882 136 80 4 169 292 565 698 1.49e-14 74.3
MsG0680030469.01.T01 AT3G06640 30.882 136 80 4 169 292 565 698 1.49e-14 74.3
MsG0680030469.01.T01 AT3G06630 30.370 135 82 3 169 292 553 686 2.87e-14 73.6
MsG0680030469.01.T01 AT2G31010 33.835 133 78 5 168 292 637 767 3.52e-14 73.6
MsG0680030469.01.T01 AT2G31010 33.835 133 78 5 168 292 637 767 3.52e-14 73.6
MsG0680030469.01.T01 AT5G57610 30.822 146 82 6 167 295 904 1047 4.26e-14 73.2
MsG0680030469.01.T01 AT1G67890 33.898 118 65 4 169 275 606 721 3.35e-13 70.5
MsG0680030469.01.T01 AT1G67890 33.898 118 65 4 169 275 606 721 3.35e-13 70.5
MsG0680030469.01.T01 AT1G08720 33.051 118 67 3 169 275 788 904 4.00e-13 70.1
MsG0680030469.01.T01 AT1G67890 33.898 118 65 4 169 275 478 593 4.64e-13 69.7
MsG0680030469.01.T01 AT4G18950 28.571 140 87 3 169 295 277 416 5.88e-13 69.3
MsG0680030469.01.T01 AT2G40860 30.000 170 76 5 169 295 47 216 5.95e-13 69.3
MsG0680030469.01.T01 AT4G18950 28.571 140 87 3 169 295 277 416 6.72e-13 68.9
MsG0680030469.01.T01 AT2G40860 30.000 170 76 5 169 295 145 314 1.10e-12 68.9
MsG0680030469.01.T01 AT2G40860 30.000 170 76 5 169 295 145 314 1.12e-12 68.9
MsG0680030469.01.T01 AT4G02630 30.769 156 80 3 168 296 284 438 1.26e-12 68.6
MsG0680030469.01.T01 AT2G40860 30.000 170 76 5 169 295 145 314 1.30e-12 68.6
MsG0680030469.01.T01 AT5G38210 31.447 159 74 5 169 295 472 627 2.93e-12 67.4
MsG0680030469.01.T01 AT5G38210 31.447 159 74 5 169 295 490 645 3.31e-12 67.4
MsG0680030469.01.T01 AT3G06630 31.356 118 69 3 169 275 553 669 3.73e-12 67.0
MsG0680030469.01.T01 AT3G25490 32.692 156 73 6 169 295 229 381 3.90e-12 66.6
MsG0680030469.01.T01 AT5G49660 34.177 158 74 7 162 292 779 933 5.08e-12 67.0
MsG0680030469.01.T01 AT4G08470 32.593 135 77 3 167 289 338 470 5.21e-12 66.6
MsG0680030469.01.T01 AT4G08470 32.593 135 77 3 167 289 420 552 5.23e-12 66.6
MsG0680030469.01.T01 AT4G34500 31.410 156 79 4 168 296 268 422 5.68e-12 66.2
MsG0680030469.01.T01 AT5G38210 31.447 159 74 5 169 295 478 633 7.97e-12 66.2
MsG0680030469.01.T01 AT5G49470 39.130 92 43 4 169 251 610 697 1.35e-11 65.5
MsG0680030469.01.T01 AT5G49470 39.773 88 40 4 169 247 610 693 3.02e-11 64.3
MsG0680030469.01.T01 AT1G66880 30.303 165 74 6 166 295 463 621 4.48e-11 63.9
MsG0680030469.01.T01 AT1G53440 31.288 163 66 6 168 294 788 940 4.95e-11 63.9
MsG0680030469.01.T01 AT5G39000 43.750 80 35 3 169 239 642 720 5.59e-11 63.9
MsG0680030469.01.T01 AT4G31110 31.707 164 81 5 164 298 548 709 5.79e-11 63.5
MsG0680030469.01.T01 AT5G38990 43.750 80 35 3 169 239 649 727 6.42e-11 63.5
MsG0680030469.01.T01 AT4G31110 31.707 164 81 5 164 298 570 731 6.95e-11 63.5
MsG0680030469.01.T01 AT1G66880 30.303 165 74 6 166 295 705 863 8.00e-11 63.2
MsG0680030469.01.T01 AT3G06630 34.444 90 52 2 169 252 553 641 9.96e-11 62.8
MsG0680030469.01.T01 AT3G06630 34.444 90 52 2 169 252 553 641 9.96e-11 62.8
MsG0680030469.01.T01 AT3G06630 34.444 90 52 2 169 252 553 641 9.96e-11 62.8

Find 74 sgRNAs with CRISPR-Local

Find 213 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACGTTGAAAATCGCCGATTT+TGG 0.252783 6:+3381479 MsG0680030469.01.T01:CDS
TCCATCTCTGGTCTCTTATC+AGG 0.269434 6:-3382274 None:intergenic
ATAGTTTCGGCATATGTTTA+TGG 0.275301 6:+3381768 MsG0680030469.01.T01:CDS
TGCAGTTAAGCTCCTTGATT+GGG 0.283061 6:+3380454 MsG0680030469.01.T01:CDS
AAACTTTGGATTCATGTTCT+TGG 0.283386 6:-3378469 None:intergenic
GTCATTGCTCGTGGTACTTT+TGG 0.286984 6:+3378836 MsG0680030469.01.T01:CDS
CATGACATGACTGGTGAAAC+TGG 0.305300 6:+3381530 MsG0680030469.01.T01:CDS
TTGCAGTTAAGCTCCTTGAT+TGG 0.327921 6:+3380453 MsG0680030469.01.T01:CDS
TCATTAAAAGTTTCAAACTT+TGG 0.367273 6:-3378483 None:intergenic
TAGTTTCGGCATATGTTTAT+GGG 0.371415 6:+3381769 MsG0680030469.01.T01:CDS
GACTATGGAGAAGAAGAATA+AGG 0.388577 6:+3378703 MsG0680030469.01.T01:CDS
TCTTAGTAGAGCATGGACTA+TGG 0.390253 6:+3378688 MsG0680030469.01.T01:CDS
TCTGTGGACAATCTTCTTCA+TGG 0.395581 6:-3381417 None:intergenic
GTGCCATACGGCAACTTCTT+GGG 0.397359 6:-3380531 None:intergenic
TGTGCCATACGGCAACTTCT+TGG 0.404580 6:-3380532 None:intergenic
CATTATTATCTGAAGGTTGA+TGG 0.405850 6:+3380395 MsG0680030469.01.T01:CDS
TGGAAGCCATTGACACTTCA+AGG 0.434979 6:+3382314 MsG0680030469.01.T01:CDS
TACAAGAAATAGACAAGAAT+GGG 0.434993 6:+3378781 MsG0680030469.01.T01:CDS
AACATCAGCCGTTGTAAGAC+AGG 0.439400 6:+3381841 MsG0680030469.01.T01:CDS
GATACGAGCTACACCAAAAT+CGG 0.456146 6:-3381492 None:intergenic
AAATGCGACGTGTATAGTTT+CGG 0.461516 6:+3381755 MsG0680030469.01.T01:CDS
ATCACATTTGCGAGTGAGCT+CGG 0.462721 6:-3382229 None:intergenic
AATATTACCCTGGTTACGTT+AGG 0.467794 6:-3380566 None:intergenic
GTGACAACTTCATCCATCTC+TGG 0.472954 6:-3382286 None:intergenic
CTCCACCCTTGAAGTGTCAA+TGG 0.481157 6:-3382320 None:intergenic
TATGATGGCATAGATGTTGC+TGG 0.485812 6:+3378878 MsG0680030469.01.T01:CDS
GAAGGTGGTGAAGTTGAAGT+AGG 0.491708 6:+3378737 MsG0680030469.01.T01:CDS
CAAATGTGATGAAAAGATGC+TGG 0.504420 6:+3382242 MsG0680030469.01.T01:CDS
CAATCATCCATGTGGGCACA+TGG 0.508132 6:-3378278 None:intergenic
TTGACCATCCTAACGTAACC+AGG 0.508214 6:+3380558 MsG0680030469.01.T01:CDS
ATACAAGAAATAGACAAGAA+TGG 0.515231 6:+3378780 MsG0680030469.01.T01:CDS
AACAGAACATTATTATCTGA+AGG 0.517608 6:+3380388 MsG0680030469.01.T01:intron
AAACTGGAACCCTTGTTACA+TGG 0.520618 6:+3381546 MsG0680030469.01.T01:CDS
ACAAAACACACGTCGTGTTC+AGG 0.528978 6:+3378249 None:intergenic
CCCTCTCTCAATCATCCATG+TGG 0.531865 6:-3378286 None:intergenic
CTGTGGACAATCTTCTTCAT+GGG 0.534647 6:-3381416 None:intergenic
AATAAGGAGAAAGAAGATGA+AGG 0.538765 6:+3378719 MsG0680030469.01.T01:CDS
ATGAAGAAGAGTGAGAGTGG+TGG 0.541302 6:+3378608 MsG0680030469.01.T01:CDS
GTTGTGTTCTATTTACTATG+TGG 0.549015 6:-3378396 None:intergenic
GCAGTTAAGCTCCTTGATTG+GGG 0.549673 6:+3380455 MsG0680030469.01.T01:CDS
ACCTCAGGAGCCATGTAACA+AGG 0.550274 6:-3381556 None:intergenic
ATGGTCAAGCTTGTGCCATA+CGG 0.556248 6:-3380543 None:intergenic
GTTCATCGTGGTGTTTATGA+TGG 0.557600 6:+3378863 MsG0680030469.01.T01:CDS
CCCTTGTTACATGGCTCCTG+AGG 0.560007 6:+3381555 MsG0680030469.01.T01:CDS
GCAAAATCCATGTGCCCACA+TGG 0.561560 6:+3378271 MsG0680030469.01.T01:five_prime_UTR
TTCACTTACCTGTCTTACAA+CGG 0.575441 6:-3381849 None:intergenic
CATTGACACTTCAAGGGTGG+AGG 0.577580 6:+3382321 MsG0680030469.01.T01:CDS
AAAGGCATCTTAGTAGAGCA+TGG 0.579191 6:+3378681 MsG0680030469.01.T01:CDS
TCGAATCCTCATGACATGAC+TGG 0.585449 6:+3381521 MsG0680030469.01.T01:CDS
CCTCTCTCAATCATCCATGT+GGG 0.592631 6:-3378285 None:intergenic
GAAATGAAGAAGAGTGAGAG+TGG 0.592718 6:+3378605 MsG0680030469.01.T01:exon
CAGTTAAGCTCCTTGATTGG+GGG 0.592969 6:+3380456 MsG0680030469.01.T01:CDS
TTACCCAAGAAGTTGCCGTA+TGG 0.596313 6:+3380528 MsG0680030469.01.T01:CDS
GGAAGCCATTGACACTTCAA+GGG 0.605120 6:+3382315 MsG0680030469.01.T01:CDS
ATTATCTGAAGGTTGATGGA+TGG 0.605689 6:+3380399 MsG0680030469.01.T01:CDS
TCCTGATAAGAGACCAGAGA+TGG 0.605775 6:+3382273 MsG0680030469.01.T01:CDS
AGTTAAGCTCCTTGATTGGG+GGG 0.620719 6:+3380457 MsG0680030469.01.T01:CDS
TTACCCTGGTTACGTTAGGA+TGG 0.620816 6:-3380562 None:intergenic
AAGGAGAAAGAAGATGAAGG+TGG 0.621113 6:+3378722 MsG0680030469.01.T01:CDS
ATCAAAACTGTCATTGCTCG+TGG 0.621624 6:+3378827 MsG0680030469.01.T01:CDS
GTTTCACCAGTCATGTCATG+AGG 0.629223 6:-3381527 None:intergenic
GGATGAAGTTGTCACCATGT+TGG 0.635432 6:+3382294 MsG0680030469.01.T01:CDS
AGCCATTGACACTTCAAGGG+TGG 0.636783 6:+3382318 MsG0680030469.01.T01:CDS
CCTCAGGAGCCATGTAACAA+GGG 0.639663 6:-3381555 None:intergenic
CCACATGGATGATTGAGAGA+GGG 0.643998 6:+3378286 MsG0680030469.01.T01:five_prime_UTR
AAATGTGATGAAAAGATGCT+GGG 0.646878 6:+3382243 MsG0680030469.01.T01:CDS
GTTTAGATGAACAATTACAA+AGG 0.652031 6:+3378663 MsG0680030469.01.T01:CDS
ACATGCTTCTAGACAAGACA+CGG 0.656374 6:+3381456 MsG0680030469.01.T01:CDS
AGTGTCAATGGCTTCCAACA+TGG 0.660764 6:-3382308 None:intergenic
CCCACATGGATGATTGAGAG+AGG 0.664497 6:+3378285 MsG0680030469.01.T01:five_prime_UTR
TGACCATCCTAACGTAACCA+GGG 0.699788 6:+3380559 MsG0680030469.01.T01:CDS
TGAAATAGCCTCGTTGAGAG+CGG 0.700408 6:+3380502 MsG0680030469.01.T01:CDS
AGTGAGCTCGGACAACATCG+CGG 0.726482 6:-3382217 None:intergenic
GGTAAAAGCCGCTCTCAACG+AGG 0.731937 6:-3380510 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATATAAATCAAACATTTA+AGG + Chr6:3380690-3380709 MsG0680030469.01.T01:intron 10.0%
!!! TCATTTTTTTTACTTTATAT+AGG + Chr6:3381382-3381401 MsG0680030469.01.T01:intron 10.0%
!!! TTAATATATTTCAATTTTCA+AGG - Chr6:3382006-3382025 None:intergenic 10.0%
!! ATTACAATTATACAAACTTA+AGG + Chr6:3379284-3379303 MsG0680030469.01.T01:intron 15.0%
!! GAAAATTGAAATATATTAAC+AGG + Chr6:3382007-3382026 MsG0680030469.01.T01:intron 15.0%
!! TAGTATCAAAAAAAAGTAAA+GGG + Chr6:3378519-3378538 MsG0680030469.01.T01:five_prime_UTR 15.0%
!! TTAGTATCAAAAAAAAGTAA+AGG + Chr6:3378518-3378537 MsG0680030469.01.T01:five_prime_UTR 15.0%
!!! TTGAAATGAAAGTATAATAA+GGG + Chr6:3379782-3379801 MsG0680030469.01.T01:intron 15.0%
!! AAAAACATGAAAGCTTAAAA+AGG - Chr6:3380357-3380376 None:intergenic 20.0%
!! AAAAAGAAGGAAAAAAAAAG+AGG - Chr6:3380104-3380123 None:intergenic 20.0%
!! AAACTACACATAAAACTATT+AGG + Chr6:3381928-3381947 MsG0680030469.01.T01:intron 20.0%
!! AACTACACATAAAACTATTA+GGG + Chr6:3381929-3381948 MsG0680030469.01.T01:intron 20.0%
!! ACTTGTCTATATACAAATTT+GGG - Chr6:3379681-3379700 None:intergenic 20.0%
!! CAAAAAAAAACTTGTCTATA+TGG - Chr6:3379536-3379555 None:intergenic 20.0%
!! GATTTATATTAGCAAATGAA+GGG - Chr6:3380681-3380700 None:intergenic 20.0%
!! TAAACTATATGACATAGATT+AGG - Chr6:3381321-3381340 None:intergenic 20.0%
!! TCATTAAAAGTTTCAAACTT+TGG - Chr6:3378486-3378505 None:intergenic 20.0%
!! TGATTTATATTAGCAAATGA+AGG - Chr6:3380682-3380701 None:intergenic 20.0%
!!! AAAAGTGTATAAGAAATGAA+TGG - Chr6:3379407-3379426 None:intergenic 20.0%
!!! AAATATTTTCAGGTTCTAAA+TGG + Chr6:3381716-3381735 MsG0680030469.01.T01:intron 20.0%
!!! AGTTAATTTTAGGAGTTAAA+TGG - Chr6:3380897-3380916 None:intergenic 20.0%
!!! CATATAGACAAGTTTTTTTT+TGG + Chr6:3379534-3379553 MsG0680030469.01.T01:intron 20.0%
!!! CTTGAAATGAAAGTATAATA+AGG + Chr6:3379781-3379800 MsG0680030469.01.T01:intron 20.0%
!!! GTTTTGATAATAAGTTTAGA+AGG - Chr6:3378815-3378834 None:intergenic 20.0%
!!! TTTTAGGCTTTATTTATCTT+AGG - Chr6:3380925-3380944 None:intergenic 20.0%
! AAATAAAAGACAGCAAAGTA+TGG - Chr6:3379949-3379968 None:intergenic 25.0%
! AACACATGAAAGTTCAAAAA+AGG - Chr6:3380197-3380216 None:intergenic 25.0%
! AACAGAACATTATTATCTGA+AGG + Chr6:3380388-3380407 MsG0680030469.01.T01:intron 25.0%
! AAGAAGAATAATGAAGTTCA+TGG - Chr6:3380173-3380192 None:intergenic 25.0%
! AAGGTATAAAATCACATTCT+TGG + Chr6:3381964-3381983 MsG0680030469.01.T01:intron 25.0%
! AATTTGTATAATCCGTTTAC+AGG - Chr6:3382127-3382146 None:intergenic 25.0%
! ACTTATCGAAACAATATATC+TGG - Chr6:3382043-3382062 None:intergenic 25.0%
! AGGTATAAAATCACATTCTT+GGG + Chr6:3381965-3381984 MsG0680030469.01.T01:intron 25.0%
! ATACAAGAAATAGACAAGAA+TGG + Chr6:3378780-3378799 MsG0680030469.01.T01:CDS 25.0%
! ATATTGTTAATAGCGTACTA+TGG + Chr6:3380645-3380664 MsG0680030469.01.T01:intron 25.0%
! ATCGTAAATTAACTCATCTT+GGG + Chr6:3381892-3381911 MsG0680030469.01.T01:intron 25.0%
! ATGAAAAAGAGCAGAAAATA+TGG - Chr6:3379902-3379921 None:intergenic 25.0%
! ATGAAACTATAAAAAGAGCT+TGG + Chr6:3380811-3380830 MsG0680030469.01.T01:intron 25.0%
! ATTTCATATGAATGCTATGA+AGG - Chr6:3380992-3381011 None:intergenic 25.0%
! CACTTGTCTATATACAAATT+TGG - Chr6:3379682-3379701 None:intergenic 25.0%
! GGTAAGTGAAATATATTAAG+TGG + Chr6:3381862-3381881 MsG0680030469.01.T01:intron 25.0%
! GTATCTAATTAAACAGAAGA+AGG + Chr6:3381232-3381251 MsG0680030469.01.T01:intron 25.0%
! GTTTAGATGAACAATTACAA+AGG + Chr6:3378663-3378682 MsG0680030469.01.T01:CDS 25.0%
! TACAAGAAATAGACAAGAAT+GGG + Chr6:3378781-3378800 MsG0680030469.01.T01:CDS 25.0%
! TACACTAAAAAGATTCATGT+TGG + Chr6:3379086-3379105 MsG0680030469.01.T01:intron 25.0%
! TCTAAGAAAGAGAAAAAAGA+AGG - Chr6:3380117-3380136 None:intergenic 25.0%
! TGAAGCAATTCAAATAAATC+AGG - Chr6:3381660-3381679 None:intergenic 25.0%
! TGGAATATTAGCATTTAGAT+TGG - Chr6:3379516-3379535 None:intergenic 25.0%
! TTAAAAATCATGTGATTCAC+AGG + Chr6:3380063-3380082 MsG0680030469.01.T01:intron 25.0%
!! ATGTTACTTCTGAAAAACTA+AGG - Chr6:3381826-3381845 None:intergenic 25.0%
!! TGGTTTGAACAAATTTTCAT+TGG - Chr6:3378452-3378471 None:intergenic 25.0%
!! TTACCTGAAGAAATATTTTC+AGG + Chr6:3381706-3381725 MsG0680030469.01.T01:intron 25.0%
!! TTGAACAAATTTTCATTGGT+GGG - Chr6:3378448-3378467 None:intergenic 25.0%
!! TTTGAACAAATTTTCATTGG+TGG - Chr6:3378449-3378468 None:intergenic 25.0%
!!! ACTCTTATTCGTTATTTTGT+TGG + Chr6:3379727-3379746 MsG0680030469.01.T01:intron 25.0%
!!! TACATGTTCTTATTGCTTTT+AGG - Chr6:3380941-3380960 None:intergenic 25.0%
!!! TTGTACTCTCTTTCTTATTT+TGG + Chr6:3378932-3378951 MsG0680030469.01.T01:intron 25.0%
AAAACACTCCTATTTGTTTG+AGG + Chr6:3379752-3379771 MsG0680030469.01.T01:intron 30.0%
AAACTTTGGATTCATGTTCT+TGG - Chr6:3378472-3378491 None:intergenic 30.0%
AAATGTGATGAAAAGATGCT+GGG + Chr6:3382243-3382262 MsG0680030469.01.T01:CDS 30.0%
AATAAGGAGAAAGAAGATGA+AGG + Chr6:3378719-3378738 MsG0680030469.01.T01:CDS 30.0%
AATATTCTGAGTCAGAAATG+AGG - Chr6:3380316-3380335 None:intergenic 30.0%
AATGGAAAAACACACACTAT+TGG - Chr6:3379389-3379408 None:intergenic 30.0%
ACAACACAACATAGATTACT+CGG - Chr6:3381179-3381198 None:intergenic 30.0%
ACTCATAGTTTCTTGATAAG+TGG - Chr6:3379361-3379380 None:intergenic 30.0%
AGATAAGACCTCAAACAAAT+AGG - Chr6:3379763-3379782 None:intergenic 30.0%
ATAGTTTCGGCATATGTTTA+TGG + Chr6:3381768-3381787 MsG0680030469.01.T01:CDS 30.0%
ATGGAAAAACACACACTATT+GGG - Chr6:3379388-3379407 None:intergenic 30.0%
CAAGATGAGTTAATTTACGA+TGG - Chr6:3381893-3381912 None:intergenic 30.0%
CATACGATTGATACTTTCTA+TGG - Chr6:3381593-3381612 None:intergenic 30.0%
CATCGTAAATTAACTCATCT+TGG + Chr6:3381891-3381910 MsG0680030469.01.T01:intron 30.0%
CATGTATATGATGAAAGAGT+CGG + Chr6:3380955-3380974 MsG0680030469.01.T01:intron 30.0%
CATTATTATCTGAAGGTTGA+TGG + Chr6:3380395-3380414 MsG0680030469.01.T01:CDS 30.0%
GAACCTGAAAATATTTCTTC+AGG - Chr6:3381712-3381731 None:intergenic 30.0%
GTTGTGTTCTATTTACTATG+TGG - Chr6:3378399-3378418 None:intergenic 30.0%
TAGTTTCGGCATATGTTTAT+GGG + Chr6:3381769-3381788 MsG0680030469.01.T01:CDS 30.0%
TATGACATAGATTAGGCATA+TGG - Chr6:3381314-3381333 None:intergenic 30.0%
TCTACAAAGTTCCAAAATTG+CGG - Chr6:3380037-3380056 None:intergenic 30.0%
TGTTACAAGAGATTTGATCT+TGG + Chr6:3379231-3379250 MsG0680030469.01.T01:intron 30.0%
TTATATTCTCGACCTGTAAA+CGG + Chr6:3382112-3382131 MsG0680030469.01.T01:intron 30.0%
! ATGGTTCTTTAAAGAACTCA+AGG - Chr6:3379972-3379991 None:intergenic 30.0%
! TTAGGTCGGTAGTTAATTTT+AGG - Chr6:3380907-3380926 None:intergenic 30.0%
!! AGGCTTTATTTATCTTAGGT+CGG - Chr6:3380921-3380940 None:intergenic 30.0%
!! ATTTCAATTTTCAAGGACCA+AGG - Chr6:3381999-3382018 None:intergenic 30.0%
!! CTTGTTGTTTGTGTTTGTAT+TGG + Chr6:3379191-3379210 MsG0680030469.01.T01:intron 30.0%
!! TACACTTTTGTTTATGCAAG+AGG + Chr6:3379418-3379437 MsG0680030469.01.T01:intron 30.0%
!! TGAGTGTTGATAATCCAAAA+TGG + Chr6:3382163-3382182 MsG0680030469.01.T01:intron 30.0%
!! TGTTTTTACTGCAGAATCTA+AGG + Chr6:3382187-3382206 MsG0680030469.01.T01:intron 30.0%
!!! CTCATCTTGGGATTTTTTTT+TGG + Chr6:3381904-3381923 MsG0680030469.01.T01:intron 30.0%
!!! TCGGTTATTTTTATCGATCA+TGG + Chr6:3380007-3380026 MsG0680030469.01.T01:intron 30.0%
!!! TCTCTTTCTTATTTTGGCAT+TGG + Chr6:3378938-3378957 MsG0680030469.01.T01:intron 30.0%
!!! TTTCTGTTTTAACATCTCTG+TGG - Chr6:3381436-3381455 None:intergenic 30.0%
AAAAACCCGAAATATTACCC+TGG - Chr6:3380579-3380598 None:intergenic 35.0%
AAATCCATTCTGCAGTTTCT+TGG + Chr6:3381095-3381114 MsG0680030469.01.T01:intron 35.0%
AAATGCGACGTGTATAGTTT+CGG + Chr6:3381755-3381774 MsG0680030469.01.T01:CDS 35.0%
AACATGTGAATTGCTTGCAA+TGG + Chr6:3381015-3381034 MsG0680030469.01.T01:intron 35.0%
AATATTACCCTGGTTACGTT+AGG - Chr6:3380569-3380588 None:intergenic 35.0%
ACATAACAAGAAGAACTGCA+CGG + Chr6:3378998-3379017 MsG0680030469.01.T01:intron 35.0%
ACGTAACCAGGGTAATATTT+CGG + Chr6:3380570-3380589 MsG0680030469.01.T01:intron 35.0%
AGAGATTTGATCTTGGAGTT+CGG + Chr6:3379238-3379257 MsG0680030469.01.T01:intron 35.0%
ATTAAACAGAAGAAGGAAGC+TGG + Chr6:3381239-3381258 MsG0680030469.01.T01:intron 35.0%
ATTAGGGTGTGTTTGTTTCA+AGG + Chr6:3381945-3381964 MsG0680030469.01.T01:intron 35.0%
ATTCTTGGGATAACATTCCT+TGG + Chr6:3381979-3381998 MsG0680030469.01.T01:intron 35.0%
CAAATGTGATGAAAAGATGC+TGG + Chr6:3382242-3382261 MsG0680030469.01.T01:CDS 35.0%
CATAGATTAGGCATATGGAT+TGG - Chr6:3381309-3381328 None:intergenic 35.0%
CGGTTAAAACGTGTTTGATT+TGG + Chr6:3379018-3379037 MsG0680030469.01.T01:intron 35.0%
CTACAGATACAAACAGAAAC+CGG + Chr6:3381140-3381159 MsG0680030469.01.T01:intron 35.0%
GAAAAACTAAGGTCAGGATA+TGG - Chr6:3381815-3381834 None:intergenic 35.0%
GACTATGGAGAAGAAGAATA+AGG + Chr6:3378703-3378722 MsG0680030469.01.T01:CDS 35.0%
TGCTACACATTTCATGAAGA+GGG - Chr6:3379485-3379504 None:intergenic 35.0%
TTCACTTACCTGTCTTACAA+CGG - Chr6:3381852-3381871 None:intergenic 35.0%
TTGCTACACATTTCATGAAG+AGG - Chr6:3379486-3379505 None:intergenic 35.0%
! AAGAGGCAAATTTGTTCACT+TGG + Chr6:3379435-3379454 MsG0680030469.01.T01:intron 35.0%
! ACTTCTGAAAAACTAAGGTC+AGG - Chr6:3381821-3381840 None:intergenic 35.0%
! AGCAAATGAAGGGCATAAAT+CGG - Chr6:3380671-3380690 None:intergenic 35.0%
! TGCAGAATGGATTTGACATT+AGG - Chr6:3381089-3381108 None:intergenic 35.0%
! TGCAGTAAAAACAGCCATTT+TGG - Chr6:3382180-3382199 None:intergenic 35.0%
!! AAGATTCATGTTGGTTTGTC+TGG + Chr6:3379095-3379114 MsG0680030469.01.T01:intron 35.0%
!! ATTATCTGAAGGTTGATGGA+TGG + Chr6:3380399-3380418 MsG0680030469.01.T01:CDS 35.0%
!! CCATGTAAGTTGATAGACTT+CGG + Chr6:3379988-3380007 MsG0680030469.01.T01:intron 35.0%
!!! CTTTCTTATTTTGGCATTGG+TGG + Chr6:3378941-3378960 MsG0680030469.01.T01:intron 35.0%
AAACTGGAACCCTTGTTACA+TGG + Chr6:3381546-3381565 MsG0680030469.01.T01:CDS 40.0%
AAGGAGAAAGAAGATGAAGG+TGG + Chr6:3378722-3378741 MsG0680030469.01.T01:CDS 40.0%
ACAAAGTTCCAAAATTGCGG+TGG - Chr6:3380034-3380053 None:intergenic 40.0%
ACATGCTTCTAGACAAGACA+CGG + Chr6:3381456-3381475 MsG0680030469.01.T01:CDS 40.0%
ATCAAAACTGTCATTGCTCG+TGG + Chr6:3378827-3378846 MsG0680030469.01.T01:CDS 40.0%
CAAACAGAAACCGGTCATAT+AGG + Chr6:3381149-3381168 MsG0680030469.01.T01:intron 40.0%
CAACAACACAACCTTCATTG+AGG - Chr6:3379618-3379637 None:intergenic 40.0%
CCGAAGTCTATCAACTTACA+TGG - Chr6:3379991-3380010 None:intergenic 40.0%
CGTAACCAGGGTAATATTTC+GGG + Chr6:3380571-3380590 MsG0680030469.01.T01:intron 40.0%
CTGTGGACAATCTTCTTCAT+GGG - Chr6:3381419-3381438 None:intergenic 40.0%
GAAATGAAGAAGAGTGAGAG+TGG + Chr6:3378605-3378624 MsG0680030469.01.T01:exon 40.0%
GATACGAGCTACACCAAAAT+CGG - Chr6:3381495-3381514 None:intergenic 40.0%
GCTACACATTTCATGAAGAG+GGG - Chr6:3379484-3379503 None:intergenic 40.0%
GTTCATCGTGGTGTTTATGA+TGG + Chr6:3378863-3378882 MsG0680030469.01.T01:CDS 40.0%
TAGTCAGAGACAGACACAAT+TGG - Chr6:3379264-3379283 None:intergenic 40.0%
TATGATGGCATAGATGTTGC+TGG + Chr6:3378878-3378897 MsG0680030469.01.T01:CDS 40.0%
TCTGTGGACAATCTTCTTCA+TGG - Chr6:3381420-3381439 None:intergenic 40.0%
TGCAGTTAAGCTCCTTGATT+GGG + Chr6:3380454-3380473 MsG0680030469.01.T01:CDS 40.0%
TTGCAGTTAAGCTCCTTGAT+TGG + Chr6:3380453-3380472 MsG0680030469.01.T01:CDS 40.0%
! ACTTTTGGTACTGTTCATCG+TGG + Chr6:3378851-3378870 MsG0680030469.01.T01:CDS 40.0%
! CAGTTTCTTGGTGCAACAAT+GGG + Chr6:3381107-3381126 MsG0680030469.01.T01:intron 40.0%
! GTTGTTGTTGAGTATTGTCC+TGG + Chr6:3381194-3381213 MsG0680030469.01.T01:intron 40.0%
! TCTTAGTAGAGCATGGACTA+TGG + Chr6:3378688-3378707 MsG0680030469.01.T01:CDS 40.0%
! TGAAGGTTGTGTTGTTGTCA+CGG + Chr6:3379621-3379640 MsG0680030469.01.T01:intron 40.0%
!! AAAGGCATCTTAGTAGAGCA+TGG + Chr6:3378681-3378700 MsG0680030469.01.T01:CDS 40.0%
!! ATCCACCTGCTTAATTTGCT+AGG + Chr6:3380775-3380794 MsG0680030469.01.T01:intron 40.0%
!! CTTGCAATGGCTGTTTTCAT+AGG + Chr6:3381028-3381047 MsG0680030469.01.T01:intron 40.0%
!! TGTTGGTTTGTCTGGTCAAT+CGG + Chr6:3379103-3379122 MsG0680030469.01.T01:intron 40.0%
!!! AAGGAAGCTGGCTTTTAAAG+TGG + Chr6:3381251-3381270 MsG0680030469.01.T01:intron 40.0%
!!! ACGTTGAAAATCGCCGATTT+TGG + Chr6:3381479-3381498 MsG0680030469.01.T01:CDS 40.0%
AACATCAGCCGTTGTAAGAC+AGG + Chr6:3381841-3381860 MsG0680030469.01.T01:CDS 45.0%
ACTCGGCATTCCTATATGAC+CGG - Chr6:3381162-3381181 None:intergenic 45.0%
AGTGTCAATGGCTTCCAACA+TGG - Chr6:3382311-3382330 None:intergenic 45.0%
AGTTAAGCTCCTTGATTGGG+GGG + Chr6:3380457-3380476 MsG0680030469.01.T01:CDS 45.0%
ATCACATTTGCGAGTGAGCT+CGG - Chr6:3382232-3382251 None:intergenic 45.0%
ATGAAGAAGAGTGAGAGTGG+TGG + Chr6:3378608-3378627 MsG0680030469.01.T01:CDS 45.0%
ATGGAAAACGCATGTACCTC+AGG - Chr6:3381574-3381593 None:intergenic 45.0%
ATGGTCAAGCTTGTGCCATA+CGG - Chr6:3380546-3380565 None:intergenic 45.0%
CAGTTAAGCTCCTTGATTGG+GGG + Chr6:3380456-3380475 MsG0680030469.01.T01:CDS 45.0%
CATGACATGACTGGTGAAAC+TGG + Chr6:3381530-3381549 MsG0680030469.01.T01:CDS 45.0%
CCACATGGATGATTGAGAGA+GGG + Chr6:3378286-3378305 MsG0680030469.01.T01:five_prime_UTR 45.0%
CCTCTCTCAATCATCCATGT+GGG - Chr6:3378288-3378307 None:intergenic 45.0%
GAAGGTGGTGAAGTTGAAGT+AGG + Chr6:3378737-3378756 MsG0680030469.01.T01:CDS 45.0%
GCAGTTAAGCTCCTTGATTG+GGG + Chr6:3380455-3380474 MsG0680030469.01.T01:CDS 45.0%
GGAAGCCATTGACACTTCAA+GGG + Chr6:3382315-3382334 MsG0680030469.01.T01:CDS 45.0%
GGATGAAGTTGTCACCATGT+TGG + Chr6:3382294-3382313 MsG0680030469.01.T01:CDS 45.0%
GTGACAACTTCATCCATCTC+TGG - Chr6:3382289-3382308 None:intergenic 45.0%
GTTTCACCAGTCATGTCATG+AGG - Chr6:3381530-3381549 None:intergenic 45.0%
TAAATACTCGCTAGCTCGAG+TGG + Chr6:3379329-3379348 MsG0680030469.01.T01:intron 45.0%
TCCATCTCTGGTCTCTTATC+AGG - Chr6:3382277-3382296 None:intergenic 45.0%
TCCTGATAAGAGACCAGAGA+TGG + Chr6:3382273-3382292 MsG0680030469.01.T01:CDS 45.0%
TCGAATCCTCATGACATGAC+TGG + Chr6:3381521-3381540 MsG0680030469.01.T01:CDS 45.0%
TGAAATAGCCTCGTTGAGAG+CGG + Chr6:3380502-3380521 MsG0680030469.01.T01:CDS 45.0%
TGACCATCCTAACGTAACCA+GGG + Chr6:3380559-3380578 MsG0680030469.01.T01:CDS 45.0%
TGCACCAAGAAACTGCAGAA+TGG - Chr6:3381102-3381121 None:intergenic 45.0%
TGGAAGCCATTGACACTTCA+AGG + Chr6:3382314-3382333 MsG0680030469.01.T01:CDS 45.0%
TGTCGCCTAGCAAATTAAGC+AGG - Chr6:3380783-3380802 None:intergenic 45.0%
TTACCCAAGAAGTTGCCGTA+TGG + Chr6:3380528-3380547 MsG0680030469.01.T01:CDS 45.0%
TTACCCTGGTTACGTTAGGA+TGG - Chr6:3380565-3380584 None:intergenic 45.0%
TTGACCATCCTAACGTAACC+AGG + Chr6:3380558-3380577 MsG0680030469.01.T01:CDS 45.0%
! ACTAGCTCTTGACCTTGCAA+AGG + Chr6:3381281-3381300 MsG0680030469.01.T01:intron 45.0%
! ATCATGGACCACCGCAATTT+TGG + Chr6:3380023-3380042 MsG0680030469.01.T01:intron 45.0%
! CTAGCTCTTGACCTTGCAAA+GGG + Chr6:3381282-3381301 MsG0680030469.01.T01:intron 45.0%
! GCAGTTTCTTGGTGCAACAA+TGG + Chr6:3381106-3381125 MsG0680030469.01.T01:intron 45.0%
! GTCATTGCTCGTGGTACTTT+TGG + Chr6:3378836-3378855 MsG0680030469.01.T01:CDS 45.0%
! GTTGTTGAGTATTGTCCTGG+TGG + Chr6:3381197-3381216 MsG0680030469.01.T01:intron 45.0%
!! TATGGATTGGACCCTTTGCA+AGG - Chr6:3381296-3381315 None:intergenic 45.0%
!!! AAAAAAAATGAAATTTTATT+AGG - Chr6:3381373-3381392 None:intergenic 5.0%
!!! TTATTTTATAATTTTTAATC+AGG - Chr6:3380241-3380260 None:intergenic 5.0%
ACCTCAGGAGCCATGTAACA+AGG - Chr6:3381559-3381578 None:intergenic 50.0%
AGCCATTGACACTTCAAGGG+TGG + Chr6:3382318-3382337 MsG0680030469.01.T01:CDS 50.0%
ATTGGGGGGAAGAAGGTCAT+CGG + Chr6:3380471-3380490 MsG0680030469.01.T01:CDS 50.0%
CAATCATCCATGTGGGCACA+TGG - Chr6:3378281-3378300 None:intergenic 50.0%
CATTGACACTTCAAGGGTGG+AGG + Chr6:3382321-3382340 MsG0680030469.01.T01:CDS 50.0%
CCCACATGGATGATTGAGAG+AGG + Chr6:3378285-3378304 MsG0680030469.01.T01:five_prime_UTR 50.0%
CCCTCTCTCAATCATCCATG+TGG - Chr6:3378289-3378308 None:intergenic 50.0%
CCTCAGGAGCCATGTAACAA+GGG - Chr6:3381558-3381577 None:intergenic 50.0%
CGCCTAGCAAATTAAGCAGG+TGG - Chr6:3380780-3380799 None:intergenic 50.0%
GACTGATGCAGCCTCAATGA+AGG + Chr6:3379604-3379623 MsG0680030469.01.T01:intron 50.0%
GCAAAATCCATGTGCCCACA+TGG + Chr6:3378271-3378290 MsG0680030469.01.T01:five_prime_UTR 50.0%
GTGCCATACGGCAACTTCTT+GGG - Chr6:3380534-3380553 None:intergenic 50.0%
TAGCGAGAAGCAGCATTGCA+AGG - Chr6:3380751-3380770 None:intergenic 50.0%
TGTGCCATACGGCAACTTCT+TGG - Chr6:3380535-3380554 None:intergenic 50.0%
! CTCCACCCTTGAAGTGTCAA+TGG - Chr6:3382323-3382342 None:intergenic 50.0%
! TACGACTTCAAAGCACCACC+AGG - Chr6:3381215-3381234 None:intergenic 50.0%
! TTGCAATGCTGCTTCTCGCT+AGG + Chr6:3380750-3380769 MsG0680030469.01.T01:intron 50.0%
AGTGAGCTCGGACAACATCG+CGG - Chr6:3382220-3382239 None:intergenic 55.0%
CCCTTGTTACATGGCTCCTG+AGG + Chr6:3381555-3381574 MsG0680030469.01.T01:CDS 55.0%
CTCCTTGATTGGGGGGAAGA+AGG + Chr6:3380464-3380483 MsG0680030469.01.T01:CDS 55.0%
GACCTTCTTCCCCCCAATCA+AGG - Chr6:3380469-3380488 None:intergenic 55.0%
GGTAAAAGCCGCTCTCAACG+AGG - Chr6:3380513-3380532 None:intergenic 55.0%
TCGGACAACATCGCGGAATC+TGG - Chr6:3382213-3382232 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
Chr6 gene 3378258 3382348 3378258 ID=MsG0680030469.01;Name=MsG0680030469.01
Chr6 mRNA 3378258 3382348 3378258 ID=MsG0680030469.01.T01;Parent=MsG0680030469.01;Name=MsG0680030469.01.T01;_AED=0.36;_eAED=0.39;_QI=350|0|0.4|1|1|1|5|0|302
Chr6 exon 3378258 3378899 3378258 ID=MsG0680030469.01.T01:exon:3299;Parent=MsG0680030469.01.T01
Chr6 exon 3380393 3380580 3380393 ID=MsG0680030469.01.T01:exon:3300;Parent=MsG0680030469.01.T01
Chr6 exon 3381404 3381576 3381404 ID=MsG0680030469.01.T01:exon:3301;Parent=MsG0680030469.01.T01
Chr6 exon 3381742 3381862 3381742 ID=MsG0680030469.01.T01:exon:3302;Parent=MsG0680030469.01.T01
Chr6 exon 3382214 3382348 3382214 ID=MsG0680030469.01.T01:exon:3303;Parent=MsG0680030469.01.T01
Chr6 five_prime_UTR 3378258 3378607 3378258 ID=MsG0680030469.01.T01:five_prime_utr;Parent=MsG0680030469.01.T01
Chr6 CDS 3378608 3378899 3378608 ID=MsG0680030469.01.T01:cds;Parent=MsG0680030469.01.T01
Chr6 CDS 3380393 3380580 3380393 ID=MsG0680030469.01.T01:cds;Parent=MsG0680030469.01.T01
Chr6 CDS 3381404 3381576 3381404 ID=MsG0680030469.01.T01:cds;Parent=MsG0680030469.01.T01
Chr6 CDS 3381742 3381862 3381742 ID=MsG0680030469.01.T01:cds;Parent=MsG0680030469.01.T01
Chr6 CDS 3382214 3382348 3382214 ID=MsG0680030469.01.T01:cds;Parent=MsG0680030469.01.T01
Gene Sequence

>MsG0680030469.01.T01

ATGAAGAAGAGTGAGAGTGGTGGATATGTGAGAGCAGATCAAATAGATCTGAAGAGTTTAGATGAACAATTACAAAGGCATCTTAGTAGAGCATGGACTATGGAGAAGAAGAATAAGGAGAAAGAAGATGAAGGTGGTGAAGTTGAAGTAGGAAGATCTTCTTCTAATAGTAATACAAGAAATAGACAAGAATGGGAGATTGATCCTTCTAAACTTATTATCAAAACTGTCATTGCTCGTGGTACTTTTGGTACTGTTCATCGTGGTGTTTATGATGGCATAGATGTTGCTGAACATTATTATCTGAAGGTTGATGGATGGATGCTAAGCAACTTGTCTTTTCATTTTGTTTTTGCAGTTAAGCTCCTTGATTGGGGGGAAGAAGGTCATCGGTCAGACGCTGAAATAGCCTCGTTGAGAGCGGCTTTTACCCAAGAAGTTGCCGTATGGCACAAGCTTGACCATCCTAACGTAACCAGGGTTGAGTTATCTCCCATGAAGAAGATTGTCCACAGAGATGTTAAAACAGAAAACATGCTTCTAGACAAGACACGGACGTTGAAAATCGCCGATTTTGGTGTAGCTCGTATCGAAGCATCGAATCCTCATGACATGACTGGTGAAACTGGAACCCTTGTTACATGGCTCCTGAGTGCATACAATAGAAAATGCGACGTGTATAGTTTCGGCATATGTTTATGGGAGATATACTGCTGTGACATGCCATATCCTGACCTTAGTTTTTCAGAAGTAACATCAGCCGTTGTAAGACAGATTCCGCGATGTTGTCCGAGCTCACTCGCAAATGTGATGAAAAGATGCTGGGATGCTAATCCTGATAAGAGACCAGAGATGGATGAAGTTGTCACCATGTTGGAAGCCATTGACACTTCAAGGGTGGAGGTATGA
Protein sequence

>MsG0680030469.01.T01

MKKSESGGYVRADQIDLKSLDEQLQRHLSRAWTMEKKNKEKEDEGGEVEVGRSSSNSNTRNRQEWEIDPSKLIIKTVIARGTFGTVHRGVYDGIDVAEHYYLKVDGWMLSNLSFHFVFAVKLLDWGEEGHRSDAEIASLRAAFTQEVAVWHKLDHPNVTRVELSPMKKIVHRDVKTENMLLDKTRTLKIADFGVARIEASNPHDMTGETGTLVTWLLSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQIPRCCPSSLANVMKRCWDANPDKRPEMDEVVTMLEAIDTSRVEV*