Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680030793.01.T01 | KEH25017.1 | 88.337 | 403 | 16 | 5 | 1 | 388 | 1 | 387 | 6.89E-172 | 495 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680030793.01.T01 | Q9FKA5 | 51.421 | 387 | 111 | 22 | 22 | 384 | 19 | 352 | 5.89E-68 | 223 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680030793.01.T01 | A0A072U5S5 | 88.337 | 403 | 16 | 5 | 1 | 388 | 1 | 387 | 3.29e-172 | 495 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0680030793.01 | MsG0680033623.01 | 0.813933 | 1.991723e-51 | 1.318189e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680030793.01.T01 | MTR_6g012780 | 88.337 | 403 | 16 | 5 | 1 | 388 | 1 | 387 | 8.35e-176 | 495 |
| MsG0680030793.01.T01 | MTR_6g012780 | 89.223 | 399 | 12 | 5 | 1 | 384 | 1 | 383 | 1.26e-172 | 488 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680030793.01.T01 | AT3G29075 | 54.861 | 144 | 44 | 5 | 1 | 143 | 1 | 124 | 2.49e-33 | 126 |
| MsG0680030793.01.T01 | AT1G11440 | 56.000 | 50 | 22 | 0 | 3 | 52 | 117 | 166 | 1.55e-11 | 65.9 |
Find 176 sgRNAs with CRISPR-Local
Find 175 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGAATGAGGAAAGTGATTA+TGG | 0.218432 | 6:-9461348 | MsG0680030793.01.T01:CDS |
| AAGAATGAGGAAAGTGAATA+TGG | 0.238375 | 6:-9461438 | MsG0680030793.01.T01:CDS |
| AGGAAGGAGGAAAGTGAATA+TGG | 0.247562 | 6:-9461270 | MsG0680030793.01.T01:CDS |
| GGGGCCCAGGAGTCTGAATA+TGG | 0.261491 | 6:-9461375 | MsG0680030793.01.T01:CDS |
| AGGAGGAGAGTGAGGGTTAT+GGG | 0.265325 | 6:-9461221 | MsG0680030793.01.T01:CDS |
| GAGGAGGAGAGTGAGGGTTA+TGG | 0.279009 | 6:-9461222 | MsG0680030793.01.T01:CDS |
| TATGCTCAACCTTCTGCTTA+TGG | 0.290344 | 6:-9461714 | MsG0680030793.01.T01:CDS |
| TTCTCCCATATTCAGACTCC+TGG | 0.294396 | 6:+9461370 | None:intergenic |
| GGGGCCCAGGAGGGTGAATA+TGG | 0.303637 | 6:-9461477 | MsG0680030793.01.T01:CDS |
| GGATCTGGGTATGGTGGTGG+TGG | 0.312300 | 6:-9461498 | MsG0680030793.01.T01:CDS |
| GTGAATATGGATCTGGGTTT+GGG | 0.317104 | 6:-9461464 | MsG0680030793.01.T01:CDS |
| AGGAAGCAAGAGGGTGAATA+TGG | 0.323037 | 6:-9461519 | MsG0680030793.01.T01:CDS |
| AGGAAGCAAGAATCTGGATA+TGG | 0.323483 | 6:-9461309 | MsG0680030793.01.T01:CDS |
| GGGAGGAAGAAGAGTGGTTA+TGG | 0.325487 | 6:-9461156 | MsG0680030793.01.T01:CDS |
| GAGGAAGAAGGGTATGGAGG+AGG | 0.335243 | 6:-9461132 | MsG0680030793.01.T01:CDS |
| GAGGAAAGTGATTATGGGTC+TGG | 0.340195 | 6:-9461342 | MsG0680030793.01.T01:CDS |
| CAAGAATCTGAAATTGGATC+TGG | 0.346947 | 6:-9461552 | MsG0680030793.01.T01:CDS |
| GTGGTGGTGGTGGGTATGGG+AGG | 0.347122 | 6:-9461599 | MsG0680030793.01.T01:CDS |
| GTATGGTGGTGGTGGGGCCC+AGG | 0.347593 | 6:-9461490 | MsG0680030793.01.T01:CDS |
| AGTGAATATGGGTCTGGTTA+TGG | 0.355805 | 6:-9461426 | MsG0680030793.01.T01:CDS |
| TATGTGAGTATTCTTACTTA+TGG | 0.357038 | 6:-9460760 | MsG0680030793.01.T01:CDS |
| GGTGAATATGGATCTGGGTT+TGG | 0.359496 | 6:-9461465 | MsG0680030793.01.T01:CDS |
| TGGTGGTGGTGGGGCCCAGG+AGG | 0.366945 | 6:-9461487 | MsG0680030793.01.T01:CDS |
| GGTGGTCAAGAATCTGAAAT+TGG | 0.368013 | 6:-9461558 | MsG0680030793.01.T01:CDS |
| CTAGGAGCAGGTCTAGGTTT+AGG | 0.380180 | 6:+9461651 | None:intergenic |
| ATCTGGGTATGGTGGTGGTG+GGG | 0.380832 | 6:-9461496 | MsG0680030793.01.T01:CDS |
| GGAGGAAGAAGAGTGGTTAT+GGG | 0.383424 | 6:-9461155 | MsG0680030793.01.T01:CDS |
| GTTTCATCGGAAGGTGGAAT+TGG | 0.386796 | 6:+9461798 | None:intergenic |
| CAAGAGGGTGAATATGGATC+TGG | 0.396904 | 6:-9461513 | MsG0680030793.01.T01:CDS |
| TCTGGATATGGGTCTGGTTA+TGG | 0.398480 | 6:-9461297 | MsG0680030793.01.T01:CDS |
| GGAGGAAGGAAGCAAGAATC+TGG | 0.406652 | 6:-9461405 | MsG0680030793.01.T01:CDS |
| GGGGAGGAAGAAGGGTATGG+AGG | 0.410870 | 6:-9461135 | MsG0680030793.01.T01:CDS |
| GAGAGTGGTGGATCGGAGTA+TGG | 0.413090 | 6:-9461183 | MsG0680030793.01.T01:CDS |
| GGTGGGAGGAAGCAAGAATC+TGG | 0.415415 | 6:-9461315 | MsG0680030793.01.T01:CDS |
| CCTGAATCTGGTGGTGGTGG+TGG | 0.415997 | 6:-9461618 | MsG0680030793.01.T01:CDS |
| GATCTGGGTATGGTGGTGGT+GGG | 0.416482 | 6:-9461497 | MsG0680030793.01.T01:CDS |
| AGTGGTTATGGGGAGGAAGA+AGG | 0.417130 | 6:-9461144 | MsG0680030793.01.T01:CDS |
| GAGGAAAGTGAATATGGGTC+TGG | 0.420897 | 6:-9461264 | MsG0680030793.01.T01:CDS |
| TATGGATCTGGGTATGGTGG+TGG | 0.422719 | 6:-9461501 | MsG0680030793.01.T01:CDS |
| AGGAAGAAGGGTATGGAGGA+GGG | 0.425811 | 6:-9461131 | MsG0680030793.01.T01:CDS |
| CAGGAGGGTGAATATGGATC+TGG | 0.427676 | 6:-9461471 | MsG0680030793.01.T01:CDS |
| AGTGATTATGGGTCTGGGTA+TGG | 0.433016 | 6:-9461336 | MsG0680030793.01.T01:CDS |
| GAAGAATGAGGAGGAGAGTG+AGG | 0.433066 | 6:-9461229 | MsG0680030793.01.T01:CDS |
| AGTGAATATGGGTCTGGGTA+TGG | 0.440801 | 6:-9461258 | MsG0680030793.01.T01:CDS |
| AGGAAGCAAGAATCTGGATA+TGG | 0.441064 | 6:-9461399 | MsG0680030793.01.T01:CDS |
| GTGGTTATGGGGAGGAAGAA+GGG | 0.452123 | 6:-9461143 | MsG0680030793.01.T01:CDS |
| GGTGGTGGTGGGGCCCAGGA+GGG | 0.455266 | 6:-9461486 | MsG0680030793.01.T01:CDS |
| GAGGAGGAGAAGCCGAGCTA+TGG | 0.460470 | 6:-9461015 | MsG0680030793.01.T01:CDS |
| GATTATGGGTCTGGGTATGG+TGG | 0.463874 | 6:-9461333 | MsG0680030793.01.T01:CDS |
| TATGGGAGGAAACAAGGATC+TGG | 0.464076 | 6:-9461585 | MsG0680030793.01.T01:CDS |
| CAGATCCATATTCACCCTCC+TGG | 0.465441 | 6:+9461472 | None:intergenic |
| ATGGGTCTGGTTATGGAGGA+AGG | 0.469449 | 6:-9461419 | MsG0680030793.01.T01:CDS |
| CAAGAATCTGGATATGGGTC+TGG | 0.469992 | 6:-9461303 | MsG0680030793.01.T01:CDS |
| GGATATGGGTCTGGTTATGG+TGG | 0.470348 | 6:-9461294 | MsG0680030793.01.T01:CDS |
| GATGAGGAGAAGCCGAGCTA+TGG | 0.471950 | 6:-9460880 | MsG0680030793.01.T01:CDS |
| GAGGAAGAAGAGTGGTTATG+GGG | 0.472853 | 6:-9461154 | MsG0680030793.01.T01:CDS |
| GAATATGGGTCTGGGTATGG+TGG | 0.474948 | 6:-9461255 | MsG0680030793.01.T01:CDS |
| GGTGGATCGGAGTATGGATC+GGG | 0.478743 | 6:-9461177 | MsG0680030793.01.T01:CDS |
| GATGAGGAGAAGCCGAGCTA+TGG | 0.479965 | 6:-9461066 | MsG0680030793.01.T01:CDS |
| TGAGCATAAGATTCAAATTG+AGG | 0.480996 | 6:+9461729 | None:intergenic |
| TACTTCACTCGTGGCGGAAA+CGG | 0.482929 | 6:-9461903 | MsG0680030793.01.T01:CDS |
| GTCTGGTTATGGTGGGAGGA+AGG | 0.483074 | 6:-9461286 | MsG0680030793.01.T01:CDS |
| ATTATGGGTCTGGGTATGGT+GGG | 0.485135 | 6:-9461332 | MsG0680030793.01.T01:CDS |
| AGAATGAGGAAAGTGATTAT+GGG | 0.485627 | 6:-9461347 | MsG0680030793.01.T01:CDS |
| AGGAAAGTGATTATGGGTCT+GGG | 0.488467 | 6:-9461341 | MsG0680030793.01.T01:CDS |
| GATGAGGAGAAGCCAAGCTA+TGG | 0.490330 | 6:-9460949 | MsG0680030793.01.T01:CDS |
| GATGAAACATGTTACCCATC+AGG | 0.490672 | 6:-9461783 | MsG0680030793.01.T01:CDS |
| GAATATGGATCTGGGTATGG+TGG | 0.492676 | 6:-9461504 | MsG0680030793.01.T01:CDS |
| AGGAGGAGAAGCCGAGCTAT+GGG | 0.492768 | 6:-9461014 | MsG0680030793.01.T01:CDS |
| GATGATGATGATGAGGGATA+TGG | 0.494555 | 6:-9460793 | MsG0680030793.01.T01:CDS |
| ATCTGGATATGGTGGGGCCC+AGG | 0.495273 | 6:-9461388 | MsG0680030793.01.T01:CDS |
| GAGGGAGGAGTGAGTATGAG+AGG | 0.495733 | 6:-9461113 | MsG0680030793.01.T01:CDS |
| GAGGAAAGTGAATATGGGTC+TGG | 0.499294 | 6:-9461432 | MsG0680030793.01.T01:CDS |
| TGAGTATGAGAGTGGTGGAT+CGG | 0.501641 | 6:-9461190 | MsG0680030793.01.T01:CDS |
| TCATCACTCCTTCCATAGCT+AGG | 0.506102 | 6:+9460901 | None:intergenic |
| TCATCACTCCTTCCATAGCT+AGG | 0.506102 | 6:+9460970 | None:intergenic |
| AGGAAAGTGAATATGGGTCT+GGG | 0.506158 | 6:-9461263 | MsG0680030793.01.T01:CDS |
| TATGGGGAGGAAGAAGGGTA+TGG | 0.507252 | 6:-9461138 | MsG0680030793.01.T01:CDS |
| TACTCAGTCCTCCCATAGCT+CGG | 0.510767 | 6:+9461003 | None:intergenic |
| ATGAGGAGAAGCCGAGCTAT+GGG | 0.513016 | 6:-9460879 | MsG0680030793.01.T01:CDS |
| TCAGTAGTCCTCCCATAGCT+TGG | 0.514716 | 6:+9460937 | None:intergenic |
| ATGAGGAGAAGCCGAGCTAT+GGG | 0.515456 | 6:-9461065 | MsG0680030793.01.T01:CDS |
| TGGTGGATCGGAGTATGGAT+CGG | 0.521545 | 6:-9461178 | MsG0680030793.01.T01:CDS |
| AATATGGGTCTGGGTATGGT+GGG | 0.522356 | 6:-9461254 | MsG0680030793.01.T01:CDS |
| TCTCCCATATTCAGACTCCT+GGG | 0.524313 | 6:+9461371 | None:intergenic |
| CATCCTGAATCTGGTGGTGG+TGG | 0.525129 | 6:-9461621 | MsG0680030793.01.T01:CDS |
| GGTGAATATGGATCTGGGTA+TGG | 0.528384 | 6:-9461507 | MsG0680030793.01.T01:CDS |
| TCGTCACTCCTTCCATAGCT+AGG | 0.528757 | 6:+9461087 | None:intergenic |
| GAATATGGGTCTGGTTATGG+AGG | 0.534629 | 6:-9461423 | MsG0680030793.01.T01:CDS |
| AGGAAACAAGGATCTGGGTA+TGG | 0.537850 | 6:-9461579 | MsG0680030793.01.T01:CDS |
| GGTGGGTATGGGAGGAAACA+AGG | 0.539324 | 6:-9461591 | MsG0680030793.01.T01:CDS |
| AAGAATGAGTATGAGAGTGG+TGG | 0.540072 | 6:-9461195 | MsG0680030793.01.T01:CDS |
| AGAATGAGGAAAGTGAATAT+GGG | 0.544489 | 6:-9461437 | MsG0680030793.01.T01:CDS |
| TATGAGAGGAAGCCTAGCTA+TGG | 0.544851 | 6:-9461099 | MsG0680030793.01.T01:CDS |
| GGAAGCAAGAATCTGGATAT+GGG | 0.545271 | 6:-9461308 | MsG0680030793.01.T01:CDS |
| ATGGGTCTGGGTATGGTGGG+AGG | 0.547302 | 6:-9461251 | MsG0680030793.01.T01:CDS |
| TATCCACCACCGTATGGTGT+TGG | 0.548698 | 6:+9461846 | None:intergenic |
| ATGGGTCTGGGTATGGTGGG+AGG | 0.549690 | 6:-9461329 | MsG0680030793.01.T01:CDS |
| TGGTTATGGTGGGAGGAAGG+AGG | 0.551400 | 6:-9461283 | MsG0680030793.01.T01:CDS |
| ATGAGGAGAAGCCAAGCTAT+GGG | 0.551651 | 6:-9460948 | MsG0680030793.01.T01:CDS |
| TATGGGAGGAAAACTAGCTA+TGG | 0.553310 | 6:-9460862 | MsG0680030793.01.T01:CDS |
| CGCCTCTCATAACCATAGCT+CGG | 0.553721 | 6:+9460817 | None:intergenic |
| ATGGGTCTGGTTATGGTGGG+AGG | 0.553742 | 6:-9461290 | MsG0680030793.01.T01:CDS |
| TTTCATCCTGAATCTGGTGG+TGG | 0.554661 | 6:-9461624 | MsG0680030793.01.T01:CDS |
| AAATTGGATCTGGGTATGGT+GGG | 0.556092 | 6:-9461542 | MsG0680030793.01.T01:CDS |
| TTGGATCTGGGTATGGTGGG+AGG | 0.557126 | 6:-9461539 | MsG0680030793.01.T01:CDS |
| AAACCACTAGGAGCAGGTCT+AGG | 0.558052 | 6:+9461645 | None:intergenic |
| GGATGAAAACCACTAGGAGC+AGG | 0.558809 | 6:+9461639 | None:intergenic |
| GAATTGGTCTACCGTAGGTA+AGG | 0.559097 | 6:+9461814 | None:intergenic |
| GTATGGTGGGAGGAAGAATG+AGG | 0.560635 | 6:-9461241 | MsG0680030793.01.T01:CDS |
| AGGAGAGTGAGGGTTATGGG+AGG | 0.563885 | 6:-9461218 | MsG0680030793.01.T01:CDS |
| GGGCCCAGGAGTCTGAATAT+GGG | 0.564705 | 6:-9461374 | MsG0680030793.01.T01:CDS |
| CTATGGAAGGAGTGATGATG+AGG | 0.564747 | 6:-9460845 | MsG0680030793.01.T01:CDS |
| CTATGGAAGGAGTGATGATG+AGG | 0.564747 | 6:-9460896 | MsG0680030793.01.T01:CDS |
| CTATGGAAGGAGTGATGATG+AGG | 0.564747 | 6:-9460965 | MsG0680030793.01.T01:CDS |
| TGAATATGGGAGAAAGAATG+AGG | 0.566293 | 6:-9461361 | MsG0680030793.01.T01:CDS |
| AAGCAAGAATCTGGATATGG+TGG | 0.569821 | 6:-9461396 | MsG0680030793.01.T01:CDS |
| AAGAATGAGGAGGAGAGTGA+GGG | 0.570080 | 6:-9461228 | MsG0680030793.01.T01:CDS |
| GAAATTGGATCTGGGTATGG+TGG | 0.570260 | 6:-9461543 | MsG0680030793.01.T01:CDS |
| AAGAATCTGAAATTGGATCT+GGG | 0.570455 | 6:-9461551 | MsG0680030793.01.T01:CDS |
| TATGAGAGGAAACCTAGCTA+TGG | 0.572094 | 6:-9460982 | MsG0680030793.01.T01:CDS |
| AGATCCATATTCACCCTCCT+GGG | 0.572216 | 6:+9461473 | None:intergenic |
| AGGAGGGTGAATATGGATCT+GGG | 0.574447 | 6:-9461470 | MsG0680030793.01.T01:CDS |
| TGGGTTTGGGAGAAAGAATG+AGG | 0.578310 | 6:-9461451 | MsG0680030793.01.T01:CDS |
| GGGTAACATGTTTCATCGGA+AGG | 0.578559 | 6:+9461789 | None:intergenic |
| GATGAGGAGAAACCGAGCTA+TGG | 0.578916 | 6:-9460829 | MsG0680030793.01.T01:CDS |
| GAAGAAGAGTGGTTATGGGG+AGG | 0.579031 | 6:-9461151 | MsG0680030793.01.T01:CDS |
| TACGAGAGGAAACCTAGCTA+TGG | 0.580456 | 6:-9460913 | MsG0680030793.01.T01:CDS |
| AGCAAGAATCTGGATATGGT+GGG | 0.581183 | 6:-9461395 | MsG0680030793.01.T01:CDS |
| GATATGGGTCTGGTTATGGT+GGG | 0.581538 | 6:-9461293 | MsG0680030793.01.T01:CDS |
| AAGAGGGTGAATATGGATCT+GGG | 0.581883 | 6:-9461512 | MsG0680030793.01.T01:CDS |
| AAGAAGGGTATGGAGGAGGG+AGG | 0.581914 | 6:-9461128 | MsG0680030793.01.T01:CDS |
| TATGGGAGGAAAACTAGCTA+TGG | 0.582880 | 6:-9461048 | MsG0680030793.01.T01:CDS |
| TCTGAAATTGGATCTGGGTA+TGG | 0.586258 | 6:-9461546 | MsG0680030793.01.T01:CDS |
| TATGGTGGGAGGAAGCAAGA+GGG | 0.587340 | 6:-9461528 | MsG0680030793.01.T01:CDS |
| GATCCAACACCATACGGTGG+TGG | 0.587938 | 6:-9461849 | MsG0680030793.01.T01:CDS |
| GGAAGGAGGAAAGTGAATAT+GGG | 0.594445 | 6:-9461269 | MsG0680030793.01.T01:CDS |
| ATGGGAGGAAACAAGGATCT+GGG | 0.600433 | 6:-9461584 | MsG0680030793.01.T01:CDS |
| TACGACATTCACCTTACCTA+CGG | 0.602527 | 6:-9461825 | MsG0680030793.01.T01:CDS |
| ATGGGAGGACTGAGTATGAG+AGG | 0.603391 | 6:-9460996 | MsG0680030793.01.T01:CDS |
| ATGTCGTATCCACCACCGTA+TGG | 0.603594 | 6:+9461840 | None:intergenic |
| TGATGGGTAACATGTTTCAT+CGG | 0.604030 | 6:+9461785 | None:intergenic |
| GGAGGAAAACTAGCTATGGA+AGG | 0.608209 | 6:-9460858 | MsG0680030793.01.T01:CDS |
| GAATACGATCCAACACCATA+CGG | 0.609449 | 6:-9461855 | MsG0680030793.01.T01:CDS |
| AGAGGAAGCCTAGCTATGGA+AGG | 0.611158 | 6:-9461095 | MsG0680030793.01.T01:CDS |
| GAGGCGTGATGATGATGATG+AGG | 0.615292 | 6:-9460800 | MsG0680030793.01.T01:CDS |
| GTATGGTGGGAGGAAGCAAG+AGG | 0.619865 | 6:-9461529 | MsG0680030793.01.T01:CDS |
| AGAGGAAACCTAGCTATGGA+AGG | 0.622082 | 6:-9460978 | MsG0680030793.01.T01:CDS |
| GCAAGAATCTGGATATGGTG+GGG | 0.626872 | 6:-9461394 | MsG0680030793.01.T01:CDS |
| CTATGGACGGAGTGATGAGG+AGG | 0.628211 | 6:-9461031 | MsG0680030793.01.T01:CDS |
| TGGTGGGAGGAAGAATGAGG+AGG | 0.629371 | 6:-9461238 | MsG0680030793.01.T01:CDS |
| AAACAAGGATCTGGGTATGG+TGG | 0.631712 | 6:-9461576 | MsG0680030793.01.T01:CDS |
| TAACATGTTTCATCGGAAGG+TGG | 0.634933 | 6:+9461792 | None:intergenic |
| CATTGTTTGATGAACCTGAT+GGG | 0.635614 | 6:+9461769 | None:intergenic |
| AGAGGAAACCTAGCTATGGA+AGG | 0.637235 | 6:-9460909 | MsG0680030793.01.T01:CDS |
| AACCGAGCTATGGTTATGAG+AGG | 0.637534 | 6:-9460819 | MsG0680030793.01.T01:CDS |
| CTATGGAAGGAGTGACGATG+AGG | 0.639792 | 6:-9461082 | MsG0680030793.01.T01:CDS |
| ATGTCATACTTCACTCGTGG+CGG | 0.640823 | 6:-9461909 | MsG0680030793.01.T01:CDS |
| AGGTGGAATTGGTCTACCGT+AGG | 0.641004 | 6:+9461809 | None:intergenic |
| GCTTCATCGCCATAAGCAGA+AGG | 0.641547 | 6:+9461705 | None:intergenic |
| AGGAAGAATGAGTATGAGAG+TGG | 0.642217 | 6:-9461198 | MsG0680030793.01.T01:CDS |
| GGATCGGGGAGGAAGAAGAG+TGG | 0.646806 | 6:-9461162 | MsG0680030793.01.T01:CDS |
| TAGCTATGGACGGAGTGATG+AGG | 0.653663 | 6:-9461034 | MsG0680030793.01.T01:CDS |
| AGGAGAAGCCGAGCTATGGG+AGG | 0.655067 | 6:-9461011 | MsG0680030793.01.T01:CDS |
| GGAGGAAAACTAGCTATGGA+CGG | 0.657547 | 6:-9461044 | MsG0680030793.01.T01:CDS |
| AGGAGAAGCCGAGCTATGGG+AGG | 0.661652 | 6:-9460876 | MsG0680030793.01.T01:CDS |
| AGGAGAAGCCGAGCTATGGG+AGG | 0.661652 | 6:-9461062 | MsG0680030793.01.T01:CDS |
| GATTCAGGATGAAAACCACT+AGG | 0.664066 | 6:+9461633 | None:intergenic |
| TCATTGTTTGATGAACCTGA+TGG | 0.670564 | 6:+9461768 | None:intergenic |
| AGGAGAAGCCAAGCTATGGG+AGG | 0.672917 | 6:-9460945 | MsG0680030793.01.T01:CDS |
| AAAATGTCATACTTCACTCG+TGG | 0.675477 | 6:-9461912 | MsG0680030793.01.T01:CDS |
| GGAGGACTACTGAGTACGAG+AGG | 0.692772 | 6:-9460927 | MsG0680030793.01.T01:CDS |
| AAACCTAGACCTGCTCCTAG+TGG | 0.693441 | 6:-9461648 | MsG0680030793.01.T01:CDS |
| TACGATCCAACACCATACGG+TGG | 0.709648 | 6:-9461852 | MsG0680030793.01.T01:CDS |
| GTGGATCGGAGTATGGATCG+GGG | 0.734380 | 6:-9461176 | MsG0680030793.01.T01:CDS |
| GATCGGAGTATGGATCGGGG+AGG | 0.756469 | 6:-9461173 | MsG0680030793.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTCTTACTTATGGTTTTA+TGG | - | Chr6:9461895-9461914 | MsG0680030793.01.T01:CDS | 20.0% |
| ! | TATGTGAGTATTCTTACTTA+TGG | - | Chr6:9461887-9461906 | MsG0680030793.01.T01:CDS | 25.0% |
| AAGAATGAGGAAAGTGAATA+TGG | - | Chr6:9461209-9461228 | MsG0680030793.01.T01:CDS | 30.0% | |
| AAGAATGAGGAAAGTGATTA+TGG | - | Chr6:9461299-9461318 | MsG0680030793.01.T01:CDS | 30.0% | |
| AGAATGAGGAAAGTGAATAT+GGG | - | Chr6:9461210-9461229 | MsG0680030793.01.T01:CDS | 30.0% | |
| AGAATGAGGAAAGTGATTAT+GGG | - | Chr6:9461300-9461319 | MsG0680030793.01.T01:CDS | 30.0% | |
| TGAGCATAAGATTCAAATTG+AGG | + | Chr6:9460921-9460940 | None:intergenic | 30.0% | |
| ! | AAGAATCTGAAATTGGATCT+GGG | - | Chr6:9461096-9461115 | MsG0680030793.01.T01:CDS | 30.0% |
| CATTGTTTGATGAACCTGAT+GGG | + | Chr6:9460881-9460900 | None:intergenic | 35.0% | |
| TCATTGTTTGATGAACCTGA+TGG | + | Chr6:9460882-9460901 | None:intergenic | 35.0% | |
| TGAATATGGGAGAAAGAATG+AGG | - | Chr6:9461286-9461305 | MsG0680030793.01.T01:CDS | 35.0% | |
| ! | CAAGAATCTGAAATTGGATC+TGG | - | Chr6:9461095-9461114 | MsG0680030793.01.T01:CDS | 35.0% |
| ! | TGATGGGTAACATGTTTCAT+CGG | + | Chr6:9460865-9460884 | None:intergenic | 35.0% |
| AAATTGGATCTGGGTATGGT+GGG | - | Chr6:9461105-9461124 | MsG0680030793.01.T01:CDS | 40.0% | |
| AAGAATGAGTATGAGAGTGG+TGG | - | Chr6:9461452-9461471 | MsG0680030793.01.T01:CDS | 40.0% | |
| AAGAGGGTGAATATGGATCT+GGG | - | Chr6:9461135-9461154 | MsG0680030793.01.T01:CDS | 40.0% | |
| AAGCAAGAATCTGGATATGG+TGG | - | Chr6:9461251-9461270 | MsG0680030793.01.T01:CDS | 40.0% | |
| AGCAAGAATCTGGATATGGT+GGG | - | Chr6:9461252-9461271 | MsG0680030793.01.T01:CDS | 40.0% | |
| AGGAAAGTGAATATGGGTCT+GGG | - | Chr6:9461216-9461235 | MsG0680030793.01.T01:CDS | 40.0% | |
| AGGAAAGTGATTATGGGTCT+GGG | - | Chr6:9461306-9461325 | MsG0680030793.01.T01:CDS | 40.0% | |
| AGGAAGAATGAGTATGAGAG+TGG | - | Chr6:9461449-9461468 | MsG0680030793.01.T01:CDS | 40.0% | |
| AGGAAGCAAGAATCTGGATA+TGG | - | Chr6:9461248-9461267 | MsG0680030793.01.T01:CDS | 40.0% | |
| AGGAAGGAGGAAAGTGAATA+TGG | - | Chr6:9461377-9461396 | MsG0680030793.01.T01:CDS | 40.0% | |
| AGTGAATATGGGTCTGGTTA+TGG | - | Chr6:9461221-9461240 | MsG0680030793.01.T01:CDS | 40.0% | |
| GAATACGATCCAACACCATA+CGG | - | Chr6:9460792-9460811 | MsG0680030793.01.T01:CDS | 40.0% | |
| GATGAAACATGTTACCCATC+AGG | - | Chr6:9460864-9460883 | MsG0680030793.01.T01:CDS | 40.0% | |
| GATTCAGGATGAAAACCACT+AGG | + | Chr6:9461017-9461036 | None:intergenic | 40.0% | |
| GGAAGCAAGAATCTGGATAT+GGG | - | Chr6:9461249-9461268 | MsG0680030793.01.T01:CDS | 40.0% | |
| GGAAGGAGGAAAGTGAATAT+GGG | - | Chr6:9461378-9461397 | MsG0680030793.01.T01:CDS | 40.0% | |
| GTGAATATGGATCTGGGTTT+GGG | - | Chr6:9461183-9461202 | MsG0680030793.01.T01:CDS | 40.0% | |
| TAACATGTTTCATCGGAAGG+TGG | + | Chr6:9460858-9460877 | None:intergenic | 40.0% | |
| TACGACATTCACCTTACCTA+CGG | - | Chr6:9460822-9460841 | MsG0680030793.01.T01:CDS | 40.0% | |
| TATGAGAGGAAACCTAGCTA+TGG | - | Chr6:9461665-9461684 | MsG0680030793.01.T01:CDS | 40.0% | |
| TATGCTCAACCTTCTGCTTA+TGG | - | Chr6:9460933-9460952 | MsG0680030793.01.T01:CDS | 40.0% | |
| TATGGGAGGAAAACTAGCTA+TGG | - | Chr6:9461599-9461618 | MsG0680030793.01.T01:CDS | 40.0% | |
| ! | AGTGGTTTTCATCCTGAATC+TGG | - | Chr6:9461017-9461036 | MsG0680030793.01.T01:CDS | 40.0% |
| ! | GATGATGATGATGAGGGATA+TGG | - | Chr6:9461854-9461873 | MsG0680030793.01.T01:CDS | 40.0% |
| ! | GGTGGTCAAGAATCTGAAAT+TGG | - | Chr6:9461089-9461108 | MsG0680030793.01.T01:CDS | 40.0% |
| ! | TCTGAAATTGGATCTGGGTA+TGG | - | Chr6:9461101-9461120 | MsG0680030793.01.T01:CDS | 40.0% |
| AAACAAGGATCTGGGTATGG+TGG | - | Chr6:9461071-9461090 | MsG0680030793.01.T01:CDS | 45.0% | |
| AACCGAGCTATGGTTATGAG+AGG | - | Chr6:9461828-9461847 | MsG0680030793.01.T01:CDS | 45.0% | |
| AAGAATGAGGAGGAGAGTGA+GGG | - | Chr6:9461419-9461438 | MsG0680030793.01.T01:CDS | 45.0% | |
| AATATGGGTCTGGGTATGGT+GGG | - | Chr6:9461393-9461412 | MsG0680030793.01.T01:CDS | 45.0% | |
| AGAGGAAACCTAGCTATGGA+AGG | - | Chr6:9461669-9461688 | MsG0680030793.01.T01:CDS | 45.0% | |
| AGATCCATATTCACCCTCCT+GGG | + | Chr6:9461177-9461196 | None:intergenic | 45.0% | |
| AGGAAACAAGGATCTGGGTA+TGG | - | Chr6:9461068-9461087 | MsG0680030793.01.T01:CDS | 45.0% | |
| AGGAAGCAAGAGGGTGAATA+TGG | - | Chr6:9461128-9461147 | MsG0680030793.01.T01:CDS | 45.0% | |
| AGGAGGGTGAATATGGATCT+GGG | - | Chr6:9461177-9461196 | MsG0680030793.01.T01:CDS | 45.0% | |
| AGTGAATATGGGTCTGGGTA+TGG | - | Chr6:9461389-9461408 | MsG0680030793.01.T01:CDS | 45.0% | |
| AGTGATTATGGGTCTGGGTA+TGG | - | Chr6:9461311-9461330 | MsG0680030793.01.T01:CDS | 45.0% | |
| ATGAGGAGAAGCCAAGCTAT+GGG | - | Chr6:9461699-9461718 | MsG0680030793.01.T01:CDS | 45.0% | |
| ATGGGAGGAAACAAGGATCT+GGG | - | Chr6:9461063-9461082 | MsG0680030793.01.T01:CDS | 45.0% | |
| ATGTCATACTTCACTCGTGG+CGG | - | Chr6:9460738-9460757 | MsG0680030793.01.T01:CDS | 45.0% | |
| ATTATGGGTCTGGGTATGGT+GGG | - | Chr6:9461315-9461334 | MsG0680030793.01.T01:CDS | 45.0% | |
| CAAGAATCTGGATATGGGTC+TGG | - | Chr6:9461344-9461363 | MsG0680030793.01.T01:CDS | 45.0% | |
| CAAGAGGGTGAATATGGATC+TGG | - | Chr6:9461134-9461153 | MsG0680030793.01.T01:CDS | 45.0% | |
| GAAATTGGATCTGGGTATGG+TGG | - | Chr6:9461104-9461123 | MsG0680030793.01.T01:CDS | 45.0% | |
| GAATATGGATCTGGGTATGG+TGG | - | Chr6:9461143-9461162 | MsG0680030793.01.T01:CDS | 45.0% | |
| GAATATGGGTCTGGTTATGG+AGG | - | Chr6:9461224-9461243 | MsG0680030793.01.T01:CDS | 45.0% | |
| GAGGAAAGTGAATATGGGTC+TGG | - | Chr6:9461215-9461234 | MsG0680030793.01.T01:CDS | 45.0% | |
| GAGGAAAGTGATTATGGGTC+TGG | - | Chr6:9461305-9461324 | MsG0680030793.01.T01:CDS | 45.0% | |
| GAGGAAGAAGAGTGGTTATG+GGG | - | Chr6:9461493-9461512 | MsG0680030793.01.T01:CDS | 45.0% | |
| GATATGGGTCTGGTTATGGT+GGG | - | Chr6:9461354-9461373 | MsG0680030793.01.T01:CDS | 45.0% | |
| GCAAGAATCTGGATATGGTG+GGG | - | Chr6:9461253-9461272 | MsG0680030793.01.T01:CDS | 45.0% | |
| GGAGGAAAACTAGCTATGGA+AGG | - | Chr6:9461603-9461622 | MsG0680030793.01.T01:CDS | 45.0% | |
| GGAGGAAAACTAGCTATGGA+CGG | - | Chr6:9461603-9461622 | MsG0680030793.01.T01:CDS | 45.0% | |
| GGAGGAAGAAGAGTGGTTAT+GGG | - | Chr6:9461492-9461511 | MsG0680030793.01.T01:CDS | 45.0% | |
| GGGTAACATGTTTCATCGGA+AGG | + | Chr6:9460861-9460880 | None:intergenic | 45.0% | |
| GGTGAATATGGATCTGGGTA+TGG | - | Chr6:9461140-9461159 | MsG0680030793.01.T01:CDS | 45.0% | |
| GGTGAATATGGATCTGGGTT+TGG | - | Chr6:9461182-9461201 | MsG0680030793.01.T01:CDS | 45.0% | |
| GTTTCATCGGAAGGTGGAAT+TGG | + | Chr6:9460852-9460871 | None:intergenic | 45.0% | |
| TACGAGAGGAAACCTAGCTA+TGG | - | Chr6:9461734-9461753 | MsG0680030793.01.T01:CDS | 45.0% | |
| TATGAGAGGAAGCCTAGCTA+TGG | - | Chr6:9461548-9461567 | MsG0680030793.01.T01:CDS | 45.0% | |
| TATGGGAGGAAACAAGGATC+TGG | - | Chr6:9461062-9461081 | MsG0680030793.01.T01:CDS | 45.0% | |
| TCATCACTCCTTCCATAGCT+AGG | + | Chr6:9461680-9461699 | None:intergenic | 45.0% | |
| TCTCCCATATTCAGACTCCT+GGG | + | Chr6:9461279-9461298 | None:intergenic | 45.0% | |
| TCTGGATATGGGTCTGGTTA+TGG | - | Chr6:9461350-9461369 | MsG0680030793.01.T01:CDS | 45.0% | |
| TGGGTTTGGGAGAAAGAATG+AGG | - | Chr6:9461196-9461215 | MsG0680030793.01.T01:CDS | 45.0% | |
| TTCTCCCATATTCAGACTCC+TGG | + | Chr6:9461280-9461299 | None:intergenic | 45.0% | |
| TTTCATCCTGAATCTGGTGG+TGG | - | Chr6:9461023-9461042 | MsG0680030793.01.T01:CDS | 45.0% | |
| ! | AGGCGTGATGATGATGATGA+GGG | - | Chr6:9461848-9461867 | MsG0680030793.01.T01:CDS | 45.0% |
| ! | CTATGGAAGGAGTGATGATG+AGG | - | Chr6:9461682-9461701 | MsG0680030793.01.T01:CDS | 45.0% |
| ! | GAATTGGTCTACCGTAGGTA+AGG | + | Chr6:9460836-9460855 | None:intergenic | 45.0% |
| ! | GGTTTTCATCCTGAATCTGG+TGG | - | Chr6:9461020-9461039 | MsG0680030793.01.T01:CDS | 45.0% |
| !! | CTAGTTTTCCTCCCATAGCT+CGG | + | Chr6:9461596-9461615 | None:intergenic | 45.0% |
| !! | TGAGTATGAGAGTGGTGGAT+CGG | - | Chr6:9461457-9461476 | MsG0680030793.01.T01:CDS | 45.0% |
| AAACCACTAGGAGCAGGTCT+AGG | + | Chr6:9461005-9461024 | None:intergenic | 50.0% | |
| AAACCTAGACCTGCTCCTAG+TGG | - | Chr6:9460999-9461018 | MsG0680030793.01.T01:CDS | 50.0% | |
| AGAGGAAGCCTAGCTATGGA+AGG | - | Chr6:9461552-9461571 | MsG0680030793.01.T01:CDS | 50.0% | |
| AGGAGGAGAGTGAGGGTTAT+GGG | - | Chr6:9461426-9461445 | MsG0680030793.01.T01:CDS | 50.0% | |
| AGTGGTTATGGGGAGGAAGA+AGG | - | Chr6:9461503-9461522 | MsG0680030793.01.T01:CDS | 50.0% | |
| ATGAGGAGAAGCCGAGCTAT+GGG | - | Chr6:9461582-9461601 | MsG0680030793.01.T01:CDS | 50.0% | |
| ATGGGAGGACTGAGTATGAG+AGG | - | Chr6:9461651-9461670 | MsG0680030793.01.T01:CDS | 50.0% | |
| ATGGGTCTGGTTATGGAGGA+AGG | - | Chr6:9461228-9461247 | MsG0680030793.01.T01:CDS | 50.0% | |
| ATGTCGTATCCACCACCGTA+TGG | + | Chr6:9460810-9460829 | None:intergenic | 50.0% | |
| CAGATCCATATTCACCCTCC+TGG | + | Chr6:9461178-9461197 | None:intergenic | 50.0% | |
| CAGGAGGGTGAATATGGATC+TGG | - | Chr6:9461176-9461195 | MsG0680030793.01.T01:CDS | 50.0% | |
| CGCCTCTCATAACCATAGCT+CGG | + | Chr6:9461833-9461852 | None:intergenic | 50.0% | |
| CTAGGAGCAGGTCTAGGTTT+AGG | + | Chr6:9460999-9461018 | None:intergenic | 50.0% | |
| CTATGGAAGGAGTGACGATG+AGG | - | Chr6:9461565-9461584 | MsG0680030793.01.T01:CDS | 50.0% | |
| GAAGAAGAGTGGTTATGGGG+AGG | - | Chr6:9461496-9461515 | MsG0680030793.01.T01:CDS | 50.0% | |
| GAAGAATGAGGAGGAGAGTG+AGG | - | Chr6:9461418-9461437 | MsG0680030793.01.T01:CDS | 50.0% | |
| GAATATGGGTCTGGGTATGG+TGG | - | Chr6:9461392-9461411 | MsG0680030793.01.T01:CDS | 50.0% | |
| GATGAGGAGAAACCGAGCTA+TGG | - | Chr6:9461818-9461837 | MsG0680030793.01.T01:CDS | 50.0% | |
| GATGAGGAGAAGCCAAGCTA+TGG | - | Chr6:9461698-9461717 | MsG0680030793.01.T01:CDS | 50.0% | |
| GATTATGGGTCTGGGTATGG+TGG | - | Chr6:9461314-9461333 | MsG0680030793.01.T01:CDS | 50.0% | |
| GCTTCATCGCCATAAGCAGA+AGG | + | Chr6:9460945-9460964 | None:intergenic | 50.0% | |
| GGAGGAAGGAAGCAAGAATC+TGG | - | Chr6:9461242-9461261 | MsG0680030793.01.T01:CDS | 50.0% | |
| GGATATGGGTCTGGTTATGG+TGG | - | Chr6:9461353-9461372 | MsG0680030793.01.T01:CDS | 50.0% | |
| GGATGAAAACCACTAGGAGC+AGG | + | Chr6:9461011-9461030 | None:intergenic | 50.0% | |
| GGGAGGAAGAAGAGTGGTTA+TGG | - | Chr6:9461491-9461510 | MsG0680030793.01.T01:CDS | 50.0% | |
| GTGGTTATGGGGAGGAAGAA+GGG | - | Chr6:9461504-9461523 | MsG0680030793.01.T01:CDS | 50.0% | |
| TACGATCCAACACCATACGG+TGG | - | Chr6:9460795-9460814 | MsG0680030793.01.T01:CDS | 50.0% | |
| TACTCAGTCCTCCCATAGCT+CGG | + | Chr6:9461647-9461666 | None:intergenic | 50.0% | |
| TAGCTATGGACGGAGTGATG+AGG | - | Chr6:9461613-9461632 | MsG0680030793.01.T01:CDS | 50.0% | |
| TATCCACCACCGTATGGTGT+TGG | + | Chr6:9460804-9460823 | None:intergenic | 50.0% | |
| TATGGATCTGGGTATGGTGG+TGG | - | Chr6:9461146-9461165 | MsG0680030793.01.T01:CDS | 50.0% | |
| TATGGGGAGGAAGAAGGGTA+TGG | - | Chr6:9461509-9461528 | MsG0680030793.01.T01:CDS | 50.0% | |
| TCAGTAGTCCTCCCATAGCT+TGG | + | Chr6:9461713-9461732 | None:intergenic | 50.0% | |
| TCGTCACTCCTTCCATAGCT+AGG | + | Chr6:9461563-9461582 | None:intergenic | 50.0% | |
| ! | AGGAAGAAGGGTATGGAGGA+GGG | - | Chr6:9461516-9461535 | MsG0680030793.01.T01:CDS | 50.0% |
| ! | AGGTGGAATTGGTCTACCGT+AGG | + | Chr6:9460841-9460860 | None:intergenic | 50.0% |
| ! | GAGGCGTGATGATGATGATG+AGG | - | Chr6:9461847-9461866 | MsG0680030793.01.T01:CDS | 50.0% |
| ! | GTATGGTGGGAGGAAGAATG+AGG | - | Chr6:9461406-9461425 | MsG0680030793.01.T01:CDS | 50.0% |
| ! | TACTTCACTCGTGGCGGAAA+CGG | - | Chr6:9460744-9460763 | MsG0680030793.01.T01:CDS | 50.0% |
| ! | TATGGTGGGAGGAAGCAAGA+GGG | - | Chr6:9461119-9461138 | MsG0680030793.01.T01:CDS | 50.0% |
| ! | TGGTGGATCGGAGTATGGAT+CGG | - | Chr6:9461469-9461488 | MsG0680030793.01.T01:CDS | 50.0% |
| AGGAGAAGCCAAGCTATGGG+AGG | - | Chr6:9461702-9461721 | MsG0680030793.01.T01:CDS | 55.0% | |
| AGGAGAGTGAGGGTTATGGG+AGG | - | Chr6:9461429-9461448 | MsG0680030793.01.T01:CDS | 55.0% | |
| AGGAGGAGAAGCCGAGCTAT+GGG | - | Chr6:9461633-9461652 | MsG0680030793.01.T01:CDS | 55.0% | |
| CTATGGACGGAGTGATGAGG+AGG | - | Chr6:9461616-9461635 | MsG0680030793.01.T01:CDS | 55.0% | |
| GAGGAGGAGAGTGAGGGTTA+TGG | - | Chr6:9461425-9461444 | MsG0680030793.01.T01:CDS | 55.0% | |
| GAGGGAGGAGTGAGTATGAG+AGG | - | Chr6:9461534-9461553 | MsG0680030793.01.T01:CDS | 55.0% | |
| GATCCAACACCATACGGTGG+TGG | - | Chr6:9460798-9460817 | MsG0680030793.01.T01:CDS | 55.0% | |
| GATGAGGAGAAGCCGAGCTA+TGG | - | Chr6:9461581-9461600 | MsG0680030793.01.T01:CDS | 55.0% | |
| GGAGGACTACTGAGTACGAG+AGG | - | Chr6:9461720-9461739 | MsG0680030793.01.T01:CDS | 55.0% | |
| GGGCCCAGGAGTCTGAATAT+GGG | - | Chr6:9461273-9461292 | MsG0680030793.01.T01:CDS | 55.0% | |
| GGTGGATCGGAGTATGGATC+GGG | - | Chr6:9461470-9461489 | MsG0680030793.01.T01:CDS | 55.0% | |
| GGTGGGAGGAAGCAAGAATC+TGG | - | Chr6:9461332-9461351 | MsG0680030793.01.T01:CDS | 55.0% | |
| GGTGGGTATGGGAGGAAACA+AGG | - | Chr6:9461056-9461075 | MsG0680030793.01.T01:CDS | 55.0% | |
| GTGGATCGGAGTATGGATCG+GGG | - | Chr6:9461471-9461490 | MsG0680030793.01.T01:CDS | 55.0% | |
| TGGTGGGAGGAAGAATGAGG+AGG | - | Chr6:9461409-9461428 | MsG0680030793.01.T01:CDS | 55.0% | |
| ! | AAGAAGGGTATGGAGGAGGG+AGG | - | Chr6:9461519-9461538 | MsG0680030793.01.T01:CDS | 55.0% |
| ! | ATGGGTCTGGTTATGGTGGG+AGG | - | Chr6:9461357-9461376 | MsG0680030793.01.T01:CDS | 55.0% |
| ! | GAGGAAGAAGGGTATGGAGG+AGG | - | Chr6:9461515-9461534 | MsG0680030793.01.T01:CDS | 55.0% |
| ! | GTATGGTGGGAGGAAGCAAG+AGG | - | Chr6:9461118-9461137 | MsG0680030793.01.T01:CDS | 55.0% |
| ! | GTCTGGTTATGGTGGGAGGA+AGG | - | Chr6:9461361-9461380 | MsG0680030793.01.T01:CDS | 55.0% |
| ! | TGGTTATGGTGGGAGGAAGG+AGG | - | Chr6:9461364-9461383 | MsG0680030793.01.T01:CDS | 55.0% |
| ! | TTGGATCTGGGTATGGTGGG+AGG | - | Chr6:9461108-9461127 | MsG0680030793.01.T01:CDS | 55.0% |
| !! | ATCTGGGTATGGTGGTGGTG+GGG | - | Chr6:9461151-9461170 | MsG0680030793.01.T01:CDS | 55.0% |
| !! | CATCCTGAATCTGGTGGTGG+TGG | - | Chr6:9461026-9461045 | MsG0680030793.01.T01:CDS | 55.0% |
| !! | GAGAGTGGTGGATCGGAGTA+TGG | - | Chr6:9461464-9461483 | MsG0680030793.01.T01:CDS | 55.0% |
| !! | GATCTGGGTATGGTGGTGGT+GGG | - | Chr6:9461150-9461169 | MsG0680030793.01.T01:CDS | 55.0% |
| AGGAGAAGCCGAGCTATGGG+AGG | - | Chr6:9461585-9461604 | MsG0680030793.01.T01:CDS | 60.0% | |
| CCACCACCACCACCAGATTC+AGG | + | Chr6:9461032-9461051 | None:intergenic | 60.0% | |
| GAGGAGGAGAAGCCGAGCTA+TGG | - | Chr6:9461632-9461651 | MsG0680030793.01.T01:CDS | 60.0% | |
| GATCGGAGTATGGATCGGGG+AGG | - | Chr6:9461474-9461493 | MsG0680030793.01.T01:CDS | 60.0% | |
| GGATCGGGGAGGAAGAAGAG+TGG | - | Chr6:9461485-9461504 | MsG0680030793.01.T01:CDS | 60.0% | |
| GGGGCCCAGGAGTCTGAATA+TGG | - | Chr6:9461272-9461291 | MsG0680030793.01.T01:CDS | 60.0% | |
| ! | ATCTGGATATGGTGGGGCCC+AGG | - | Chr6:9461259-9461278 | MsG0680030793.01.T01:CDS | 60.0% |
| ! | ATGGGTCTGGGTATGGTGGG+AGG | - | Chr6:9461318-9461337 | MsG0680030793.01.T01:CDS | 60.0% |
| ! | GGGGAGGAAGAAGGGTATGG+AGG | - | Chr6:9461512-9461531 | MsG0680030793.01.T01:CDS | 60.0% |
| !! | CCTGAATCTGGTGGTGGTGG+TGG | - | Chr6:9461029-9461048 | MsG0680030793.01.T01:CDS | 60.0% |
| !! | GAATCTGGTGGTGGTGGTGG+TGG | - | Chr6:9461032-9461051 | MsG0680030793.01.T01:CDS | 60.0% |
| !! | GGATCTGGGTATGGTGGTGG+TGG | - | Chr6:9461149-9461168 | MsG0680030793.01.T01:CDS | 60.0% |
| !! | GTGGTGGTGGTGGTGGGTAT+GGG | - | Chr6:9461045-9461064 | MsG0680030793.01.T01:CDS | 60.0% |
| GGGGCCCAGGAGGGTGAATA+TGG | - | Chr6:9461170-9461189 | MsG0680030793.01.T01:CDS | 65.0% | |
| !! | GGTGGTGGTGGTGGTGGGTA+TGG | - | Chr6:9461044-9461063 | MsG0680030793.01.T01:CDS | 65.0% |
| !! | GTGGTGGTGGTGGGTATGGG+AGG | - | Chr6:9461048-9461067 | MsG0680030793.01.T01:CDS | 65.0% |
| !! | GTGGTGGTGGTGGTGGTGGT+GGG | - | Chr6:9461039-9461058 | MsG0680030793.01.T01:CDS | 65.0% |
| !! | TCTGGTGGTGGTGGTGGTGG+TGG | - | Chr6:9461035-9461054 | MsG0680030793.01.T01:CDS | 65.0% |
| !! | GGTGGTGGTGGTGGTGGTGG+TGG | - | Chr6:9461038-9461057 | MsG0680030793.01.T01:CDS | 70.0% |
| !! | GTATGGTGGTGGTGGGGCCC+AGG | - | Chr6:9461157-9461176 | MsG0680030793.01.T01:CDS | 70.0% |
| !! | GGTGGTGGTGGGGCCCAGGA+GGG | - | Chr6:9461161-9461180 | MsG0680030793.01.T01:CDS | 75.0% |
| !! | TGGTGGTGGTGGGGCCCAGG+AGG | - | Chr6:9461160-9461179 | MsG0680030793.01.T01:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr6 | gene | 9460738 | 9461931 | 9460738 | ID=MsG0680030793.01;Name=MsG0680030793.01 |
| Chr6 | mRNA | 9460738 | 9461931 | 9460738 | ID=MsG0680030793.01.T01;Parent=MsG0680030793.01;Name=MsG0680030793.01.T01;_AED=0.49;_eAED=0.49;_QI=0|-1|0|1|-1|1|1|0|397 |
| Chr6 | exon | 9460738 | 9461931 | 9460738 | ID=MsG0680030793.01.T01:exon:7531;Parent=MsG0680030793.01.T01 |
| Chr6 | CDS | 9460738 | 9461931 | 9460738 | ID=MsG0680030793.01.T01:cds;Parent=MsG0680030793.01.T01 |
| Gene Sequence |
| Protein sequence |
