AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680031876.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680031876.01.T01 MTR_8g098350 81.149 435 69 2 35 463 81 508 0.0 727
MsG0680031876.01.T01 MTR_5g010250 65.287 435 138 2 35 463 85 512 0.0 595
MsG0680031876.01.T01 MTR_5g010210 63.677 223 74 1 43 265 12 227 1.38e-97 293
MsG0680031876.01.T01 MTR_5g010230 63.768 138 50 0 326 463 2 139 9.89e-55 179
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680031876.01.T01 AT4G23100 77.701 435 84 2 35 463 95 522 0.0 697
MsG0680031876.01.T01 AT4G23100 77.701 435 84 2 35 463 95 522 0.0 697
MsG0680031876.01.T01 AT4G23100 78.851 383 68 2 35 411 95 470 0.0 622

Find 118 sgRNAs with CRISPR-Local

Find 572 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACTCCAGCTGAGGGGCTTT+TGG 0.163907 6:+28845893 MsG0680031876.01.T01:CDS
GCTATTTGCTCATACTTAAT+AGG 0.213492 6:-28836777 None:intergenic
TAAAGCTGTTGCTGAGAAAA+TGG 0.218963 6:+28837531 MsG0680031876.01.T01:CDS
TATGAGGAATTGCTTTATTA+AGG 0.225114 6:+28845957 MsG0680031876.01.T01:CDS
TGCTTTATTAAGGTGTATTA+AGG 0.230016 6:+28845967 MsG0680031876.01.T01:exon
GTGGGGAGTGGTCCGGCTTT+TGG 0.249532 6:+28836010 MsG0680031876.01.T01:CDS
ATGGAAGGTGATAAAATTAT+TGG 0.264744 6:+28836846 MsG0680031876.01.T01:CDS
ATAATTCTATGTCCTAATAT+TGG 0.272615 6:+28846157 MsG0680031876.01.T01:three_prime_UTR
GATAAGTTTATGTGCTTTAC+CGG 0.280516 6:+28844002 MsG0680031876.01.T01:CDS
TAATGATTGGGAGAATCATT+TGG 0.297841 6:+28843803 MsG0680031876.01.T01:CDS
GGTCAGGCTAAAGAGATATT+TGG 0.302209 6:+28843951 MsG0680031876.01.T01:intron
TATGTGCTTTACCGGCATTT+TGG 0.317971 6:+28844010 MsG0680031876.01.T01:CDS
CAAATAGCAGAATTGCTAAA+TGG 0.329132 6:+28836792 MsG0680031876.01.T01:CDS
GGTACTGAACATGAAAAGTT+TGG 0.334434 6:+28836732 MsG0680031876.01.T01:CDS
CTCTGGCAGGCTACCAAAAC+TGG 0.342219 6:+28844803 MsG0680031876.01.T01:intron
GTCTGATGCAGGGTTTCAAC+AGG 0.353436 6:-28837041 None:intergenic
TCTCATACCTGCACGACTTC+AGG 0.358579 6:-28836075 None:intergenic
TGGTGTCTTTAGACCAGTTT+TGG 0.362938 6:-28844816 None:intergenic
AATTACCATCTCTTAATGAT+TGG 0.363029 6:+28843790 MsG0680031876.01.T01:CDS
AAAACTACCTTTGGTATCAT+AGG 0.367052 6:-28837607 None:intergenic
CATTTCATTCTGATGTGATT+CGG 0.369044 6:-28836049 None:intergenic
AAGACAAATGCTGAGGAATA+AGG 0.371420 6:+28844332 MsG0680031876.01.T01:CDS
CTTTGAGTCCAGACTTTGGC+TGG 0.374549 6:-28837579 None:intergenic
ACTGTACTGGAATGACCTTC+AGG 0.375014 6:+28843594 MsG0680031876.01.T01:CDS
AATGATTGGGAGAATCATTT+GGG 0.394541 6:+28843804 MsG0680031876.01.T01:CDS
CAAGGCTAGCACGAAACTTC+CGG 0.407747 6:-28839531 None:intergenic
ATAGGTTTCCAGCCAAAGTC+TGG 0.408156 6:+28837571 MsG0680031876.01.T01:CDS
TTCATGTCCTCTTGCAGAAT+AGG 0.408282 6:+28836711 MsG0680031876.01.T01:CDS
CGAATCACATCAGAATGAAA+TGG 0.411990 6:+28836050 MsG0680031876.01.T01:CDS
GTTGCTGAGAAAATGGGAAT+TGG 0.415295 6:+28837538 MsG0680031876.01.T01:CDS
TAAACTCTTACAGGTCAATC+TGG 0.415633 6:+28839483 MsG0680031876.01.T01:intron
TATTAGGACATAGAATTATA+AGG 0.426492 6:-28846153 None:intergenic
GCAAATTCACCCTTCACAAA+TGG 0.427211 6:+28839667 MsG0680031876.01.T01:CDS
GGAAAGCTACCTTGTATTCC+CGG 0.427455 6:+28843765 MsG0680031876.01.T01:CDS
ATTACCATCTCTTAATGATT+GGG 0.431120 6:+28843791 MsG0680031876.01.T01:CDS
TTTCTTCATAAGTCTGATGC+AGG 0.444194 6:-28837052 None:intergenic
TATTTGGACTGATGTTGATA+AGG 0.446646 6:+28843264 MsG0680031876.01.T01:CDS
CTCATAATGACAAACCCATT+GGG 0.451394 6:-28839694 None:intergenic
AATGAGGGTGGGGAGTGGTC+CGG 0.454992 6:+28836003 MsG0680031876.01.T01:CDS
GTAGCTGAGGTGGCAAGAAC+AGG 0.462943 6:+28845475 MsG0680031876.01.T01:CDS
TATTAGATTTGACAGCAGAT+TGG 0.463933 6:+28844298 MsG0680031876.01.T01:CDS
AGCCCACGAGAACCAACTTT+GGG 0.464046 6:-28839320 None:intergenic
GGGCAAGCAAAACATATCAT+TGG 0.467215 6:+28836986 MsG0680031876.01.T01:intron
AAGAAACACATCGACTGTAC+TGG 0.468991 6:+28843581 MsG0680031876.01.T01:CDS
AAAGCTGTTGCTGAGAAAAT+GGG 0.478931 6:+28837532 MsG0680031876.01.T01:CDS
AACAAATACATGCCCAAAGT+TGG 0.479007 6:+28839308 MsG0680031876.01.T01:CDS
ACCTAGAAGCTGCCAAAAGC+CGG 0.481675 6:-28836022 None:intergenic
ATCTATTGATCATGTATATG+AGG 0.482675 6:+28845941 MsG0680031876.01.T01:CDS
ACTGAAGCATGTTGCTGAAG+AGG 0.484682 6:+28844853 MsG0680031876.01.T01:CDS
ACAATATCTACAGGATGGCT+TGG 0.487073 6:+28845414 MsG0680031876.01.T01:intron
TCACAAATGGAAAGCCCAAT+GGG 0.491400 6:+28839680 MsG0680031876.01.T01:CDS
ATTGGGCTTTCCATTTGTGA+AGG 0.492044 6:-28839677 None:intergenic
GGTGGTCAGTTAGAACTTAG+TGG 0.492360 6:+28837014 MsG0680031876.01.T01:CDS
AAGCCCACGAGAACCAACTT+TGG 0.494264 6:-28839321 None:intergenic
TTCAGTAAACCATCTCGAAA+TGG 0.494326 6:-28844836 None:intergenic
AAAGAATCATCGAAAACAAA+AGG 0.495048 6:-28843304 None:intergenic
AAAGCACATAAACTTATCAT+TGG 0.495697 6:-28843997 None:intergenic
TGCTGAAGAGGTTCTAAAGT+TGG 0.497850 6:+28844865 MsG0680031876.01.T01:CDS
CACCTGTACAGTGCATGTCC+TGG 0.499549 6:-28839354 None:intergenic
AATTCCAAAAGCCCCTCAGC+TGG 0.499718 6:-28845897 None:intergenic
GTGGGCTTGACGTGATGTCC+AGG 0.504094 6:+28839336 MsG0680031876.01.T01:CDS
GTTCTGAAGCTGACATGATC+CGG 0.509031 6:+28839512 MsG0680031876.01.T01:CDS
GTAGGTGTCACTCCAGCTGA+GGG 0.509698 6:+28845885 MsG0680031876.01.T01:intron
CACTCGAGGCTAATGAGGGT+GGG 0.509981 6:+28835992 MsG0680031876.01.T01:CDS
ATGTCTTTGAGTCCAGACTT+TGG 0.514374 6:-28837583 None:intergenic
ATGCCCAAAGTTGGTTCTCG+TGG 0.516817 6:+28839317 MsG0680031876.01.T01:CDS
TTGGGCTTTCCATTTGTGAA+GGG 0.523652 6:-28839676 None:intergenic
ATTAAGAGATGGTAATTCAC+CGG 0.524008 6:-28843784 None:intergenic
TTCTTACGGGCTGCAATGCA+AGG 0.524114 6:-28839549 None:intergenic
TTCTGGGATAAAGTAATGGA+AGG 0.525114 6:+28836831 MsG0680031876.01.T01:CDS
AGGCTAATGAGGGTGGGGAG+TGG 0.526325 6:+28835998 MsG0680031876.01.T01:CDS
GGTAATTCACCGGGAATACA+AGG 0.526372 6:-28843774 None:intergenic
ATCTAAAAGCAGACATAACC+AGG 0.527432 6:-28846048 None:intergenic
TTTGCTGTAGGACTTCTTGG+CGG 0.529779 6:+28843743 MsG0680031876.01.T01:intron
GGTAGGTGTCACTCCAGCTG+AGG 0.530270 6:+28845884 MsG0680031876.01.T01:intron
TATGGCACTCGAGGCTAATG+AGG 0.530341 6:+28835987 None:intergenic
TCTCATAATGACAAACCCAT+TGG 0.534303 6:-28839695 None:intergenic
CTGTACTGGAATGACCTTCA+GGG 0.536065 6:+28843595 MsG0680031876.01.T01:CDS
TGGAATTGTATCATGGAAAG+TGG 0.536508 6:+28845913 MsG0680031876.01.T01:CDS
TTGCTGTAGGACTTCTTGGC+GGG 0.540519 6:+28843744 MsG0680031876.01.T01:intron
TTCACAAATGGAAAGCCCAA+TGG 0.543962 6:+28839679 MsG0680031876.01.T01:CDS
GCACTCGAGGCTAATGAGGG+TGG 0.549069 6:+28835991 MsG0680031876.01.T01:CDS
TTTGAATGTAGTAGCTGAGG+TGG 0.550346 6:+28845465 MsG0680031876.01.T01:CDS
ATGCAAGACTAACTTGATAG+AGG 0.555252 6:-28837085 None:intergenic
AAACCTAGGCTATATAGTCC+TGG 0.557005 6:+28846030 MsG0680031876.01.T01:three_prime_UTR
TGCCCAAAGTTGGTTCTCGT+GGG 0.557825 6:+28839318 MsG0680031876.01.T01:CDS
ACTCGAGGCTAATGAGGGTG+GGG 0.565655 6:+28835993 MsG0680031876.01.T01:CDS
CTAAAGACACCATTTCGAGA+TGG 0.568445 6:+28844827 MsG0680031876.01.T01:CDS
TTCAGTACCTATTCTGCAAG+AGG 0.572806 6:-28836718 None:intergenic
AGATGAGAGGTGCTGACGGA+GGG 0.574545 6:+28843974 MsG0680031876.01.T01:CDS
AAGATAGATGGGAACCCTGA+AGG 0.577010 6:-28843609 None:intergenic
GTCCAGGACATGCACTGTAC+AGG 0.579109 6:+28839352 MsG0680031876.01.T01:CDS
AATGGATCCTGAAGTCGTGC+AGG 0.579382 6:+28836068 MsG0680031876.01.T01:CDS
CCGCCACTTACCCAAAATGC+CGG 0.585206 6:-28844021 None:intergenic
TTCTTCATAAGTCTGATGCA+GGG 0.586177 6:-28837051 None:intergenic
CAAAACATATCATTGGAGCC+AGG 0.589030 6:+28836993 MsG0680031876.01.T01:CDS
TTTGGGCACTATATTTCCTG+AGG 0.591776 6:+28843821 MsG0680031876.01.T01:CDS
TTGGAGATGAGAGGTGCTGA+CGG 0.591982 6:+28843970 MsG0680031876.01.T01:CDS
ATGGGTTTGTCATTATGAGA+AGG 0.592548 6:+28839698 MsG0680031876.01.T01:CDS
TTCCGATAGACAAAACACAT+TGG 0.593142 6:-28843557 None:intergenic
CTAAGTTCTAACTGACCACC+TGG 0.606521 6:-28837011 None:intergenic
TTAAGAGATGGTAATTCACC+GGG 0.614513 6:-28843783 None:intergenic
TCATGGGCATATGGCACTCG+AGG 0.614599 6:+28835978 None:intergenic
TAACCAGGACTATATAGCCT+AGG 0.614884 6:-28846033 None:intergenic
TTCTCCCAATCATTAAGAGA+TGG 0.617147 6:-28843795 None:intergenic
AAGAGATATTTGGAGATGAG+AGG 0.618382 6:+28843961 MsG0680031876.01.T01:CDS
GTAGAGTGTTTGTAAAACCT+AGG 0.619811 6:+28846016 MsG0680031876.01.T01:three_prime_UTR
AGAGGTTCTAAAGTTGGCAA+AGG 0.632714 6:+28844871 MsG0680031876.01.T01:CDS
GAGATGAGAGGTGCTGACGG+AGG 0.635652 6:+28843973 MsG0680031876.01.T01:CDS
GATGTTGATAAGGACCGCAC+AGG 0.642361 6:+28843274 MsG0680031876.01.T01:CDS
CTGATGCAGGGTTTCAACAG+GGG 0.644518 6:-28837039 None:intergenic
TCTGATGCAGGGTTTCAACA+GGG 0.644584 6:-28837040 None:intergenic
CAAAAGGCAGCATGCCTGTG+CGG 0.646851 6:-28843288 None:intergenic
ATGGCACTCGAGGCTAATGA+GGG 0.648065 6:+28835988 MsG0680031876.01.T01:CDS
AGACATGCCTATGATACCAA+AGG 0.648416 6:+28837600 MsG0680031876.01.T01:CDS
CAGAAGAAAGACAAATGCTG+AGG 0.668955 6:+28844325 MsG0680031876.01.T01:CDS
TAGGTGTCACTCCAGCTGAG+GGG 0.697378 6:+28845886 MsG0680031876.01.T01:intron
AACATATCATTGGAGCCAGG+TGG 0.701443 6:+28836996 MsG0680031876.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATATATTTTTTTTTTATTA+CGG + Chr6:28839579-28839598 MsG0680031876.01.T01:intron 0.0%
!! AGTTACAATTATAAATAAAA+TGG - Chr6:28845025-28845044 None:intergenic 10.0%
!! ATAATTTCGATATAAAAAAT+TGG - Chr6:28845638-28845657 None:intergenic 10.0%
!! ATCATGATATTAAAATAATT+TGG + Chr6:28841146-28841165 MsG0680031876.01.T01:intron 10.0%
!! TATAAATAAAATAGATTAGA+AGG - Chr6:28845113-28845132 None:intergenic 10.0%
!! TCATGATATTAAAATAATTT+GGG + Chr6:28841147-28841166 MsG0680031876.01.T01:intron 10.0%
!! TTATCATTTAAAAAAGATAA+TGG - Chr6:28836552-28836571 None:intergenic 10.0%
!!! ATATTTTATATTCATTAACT+TGG + Chr6:28845510-28845529 MsG0680031876.01.T01:intron 10.0%
!!! ATTATCTTTTTTAAATGATA+AGG + Chr6:28836551-28836570 MsG0680031876.01.T01:intron 10.0%
!!! TGTTTAAAATTTAAGAAAAT+GGG - Chr6:28843240-28843259 None:intergenic 10.0%
!! AAAAAAAAGGAAAATTATCA+TGG - Chr6:28836354-28836373 None:intergenic 15.0%
!! AAAAATATATCGAAATTTCT+AGG + Chr6:28845684-28845703 MsG0680031876.01.T01:intron 15.0%
!! AAATATTAAATTAATGCTAC+TGG - Chr6:28844743-28844762 None:intergenic 15.0%
!! ACTAATAATATACACATATT+AGG + Chr6:28845374-28845393 MsG0680031876.01.T01:intron 15.0%
!! ATAATATTATATGATGACTT+AGG + Chr6:28844981-28845000 MsG0680031876.01.T01:intron 15.0%
!! TAAATGATAAGGAAAAAAAT+CGG + Chr6:28836562-28836581 MsG0680031876.01.T01:intron 15.0%
!! TAATATTATATGATGACTTA+GGG + Chr6:28844982-28845001 MsG0680031876.01.T01:intron 15.0%
!! TTATATTTCTTATTCAACAA+GGG - Chr6:28838489-28838508 None:intergenic 15.0%
!!! AAATTTTAAACAGTCATATT+TGG + Chr6:28843248-28843267 MsG0680031876.01.T01:intron 15.0%
!!! AATAAAAATAAAACCGTTTT+TGG - Chr6:28844431-28844450 None:intergenic 15.0%
!!! AATCTATTCATTTTCAATTA+AGG + Chr6:28837135-28837154 MsG0680031876.01.T01:intron 15.0%
!!! AGTTTGTTACAATTTTATTA+AGG + Chr6:28836408-28836427 MsG0680031876.01.T01:intron 15.0%
!!! ATAAAAATAAAACCGTTTTT+GGG - Chr6:28844430-28844449 None:intergenic 15.0%
!!! ATATATATCATTGTTTCTTA+CGG - Chr6:28839566-28839585 None:intergenic 15.0%
!!! ATTTGAAACAATGTTATATA+TGG - Chr6:28839977-28839996 None:intergenic 15.0%
!!! CTGTTTAAAATTTAAGAAAA+TGG - Chr6:28843241-28843260 None:intergenic 15.0%
!!! GTGTTATATTTAATTTTATG+TGG + Chr6:28841371-28841390 MsG0680031876.01.T01:intron 15.0%
!!! TACAATTTTATTAAGGATAA+AGG + Chr6:28836415-28836434 MsG0680031876.01.T01:intron 15.0%
!!! TATAAATAAAATGGATTAGA+AGG - Chr6:28845016-28845035 None:intergenic 15.0%
!!! TATTACATTTTTATTTTGCA+TGG + Chr6:28836469-28836488 MsG0680031876.01.T01:intron 15.0%
!!! TCTAATTTAAGATTGTATTT+TGG + Chr6:28839418-28839437 MsG0680031876.01.T01:intron 15.0%
!!! TTATGTTGTTATTTCTATTT+CGG + Chr6:28838947-28838966 MsG0680031876.01.T01:intron 15.0%
!! AAACTTAACTTACTAAGTAA+TGG + Chr6:28842309-28842328 MsG0680031876.01.T01:intron 20.0%
!! AAGTTTCTTAATACAATTCA+AGG - Chr6:28837656-28837675 None:intergenic 20.0%
!! AATACATTGAAGACATTATT+AGG + Chr6:28841814-28841833 MsG0680031876.01.T01:intron 20.0%
!! AATACTAAATCACATAAATC+CGG - Chr6:28842374-28842393 None:intergenic 20.0%
!! AATATGTTAGATTTAACATG+TGG + Chr6:28840884-28840903 MsG0680031876.01.T01:intron 20.0%
!! ACAAGAATATTAAAGATAGA+TGG - Chr6:28843624-28843643 None:intergenic 20.0%
!! ACCATTCAAAATAACATAAT+GGG + Chr6:28836623-28836642 MsG0680031876.01.T01:intron 20.0%
!! ATAACATTGTTTCAAATCAA+AGG + Chr6:28839980-28839999 MsG0680031876.01.T01:intron 20.0%
!! ATAATTCTATGTCCTAATAT+TGG + Chr6:28846157-28846176 MsG0680031876.01.T01:three_prime_UTR 20.0%
!! ATACATTGAAGACATTATTA+GGG + Chr6:28841815-28841834 MsG0680031876.01.T01:intron 20.0%
!! ATATACAATTTGGTACAATT+TGG + Chr6:28836587-28836606 MsG0680031876.01.T01:intron 20.0%
!! ATGTAAGGAAATAAATATCT+TGG - Chr6:28837495-28837514 None:intergenic 20.0%
!! ATTCAATGTATGATATATCT+TGG + Chr6:28841487-28841506 MsG0680031876.01.T01:intron 20.0%
!! CAAGAATATTAAAGATAGAT+GGG - Chr6:28843623-28843642 None:intergenic 20.0%
!! CATGATAATATGAAAAGTAA+TGG + Chr6:28841109-28841128 MsG0680031876.01.T01:intron 20.0%
!! GTTATATTTCTTATTCAACA+AGG - Chr6:28838490-28838509 None:intergenic 20.0%
!! TAAATCTGTAAAATACTGTT+AGG + Chr6:28840198-28840217 MsG0680031876.01.T01:intron 20.0%
!! TAAATTGTCAAAATATCAAG+TGG + Chr6:28841016-28841035 MsG0680031876.01.T01:intron 20.0%
!! TAACATTGTTTCAAATCAAA+GGG + Chr6:28839981-28840000 MsG0680031876.01.T01:intron 20.0%
!! TAATTCTATGTCCTAATATT+GGG + Chr6:28846158-28846177 MsG0680031876.01.T01:three_prime_UTR 20.0%
!! TATGATTTACTTGTGATTAA+TGG + Chr6:28840557-28840576 MsG0680031876.01.T01:intron 20.0%
!! TATTAGGACATAGAATTATA+AGG - Chr6:28846156-28846175 None:intergenic 20.0%
!! TCAATTAAGGAAATATCATA+TGG + Chr6:28837148-28837167 MsG0680031876.01.T01:intron 20.0%
!! TCTTGTCATCTTAATTAATT+TGG + Chr6:28843638-28843657 MsG0680031876.01.T01:intron 20.0%
!! TGTGAAAATAAAATTACACT+TGG - Chr6:28836952-28836971 None:intergenic 20.0%
!! TTCTTTCAAAAAAAGAAGTA+AGG + Chr6:28838402-28838421 MsG0680031876.01.T01:intron 20.0%
!! TTGTGTTTATAGTAACAAAA+TGG - Chr6:28843916-28843935 None:intergenic 20.0%
!!! AACAAACACTATTCATTTTT+TGG - Chr6:28836498-28836517 None:intergenic 20.0%
!!! AACAGTATTTTACAGATTTA+TGG - Chr6:28840198-28840217 None:intergenic 20.0%
!!! AACATTTTATCTGTTTTCTT+TGG + Chr6:28845837-28845856 MsG0680031876.01.T01:intron 20.0%
!!! AACTAACTTAATCTTTAAGA+CGG - Chr6:28844696-28844715 None:intergenic 20.0%
!!! ATATATTAGTTTTTTCGATG+TGG + Chr6:28845248-28845267 MsG0680031876.01.T01:intron 20.0%
!!! ATTTAGTATTTTGAAAATGG+TGG + Chr6:28842384-28842403 MsG0680031876.01.T01:intron 20.0%
!!! CATAGAAAATATTGTGATTT+TGG + Chr6:28841216-28841235 MsG0680031876.01.T01:intron 20.0%
!!! CATGTTCGATTTTTTATAAT+GGG + Chr6:28837461-28837480 MsG0680031876.01.T01:intron 20.0%
!!! GATTTATATGGTTTTTTTAG+CGG + Chr6:28845134-28845153 MsG0680031876.01.T01:intron 20.0%
!!! GATTTTTTATAATGGGAATT+GGG + Chr6:28837468-28837487 MsG0680031876.01.T01:intron 20.0%
!!! GTGATTTAGTATTTTGAAAA+TGG + Chr6:28842381-28842400 MsG0680031876.01.T01:intron 20.0%
!!! TATATATCATTGTTTCTTAC+GGG - Chr6:28839565-28839584 None:intergenic 20.0%
!!! TATTTGATGATCCTAATATT+AGG + Chr6:28843341-28843360 MsG0680031876.01.T01:intron 20.0%
!!! TCATGTTCGATTTTTTATAA+TGG + Chr6:28837460-28837479 MsG0680031876.01.T01:intron 20.0%
!!! TGATTCATTTTTAGCTTTAA+TGG + Chr6:28839225-28839244 MsG0680031876.01.T01:intron 20.0%
!!! TTAAAGTGATTCCATTATTT+TGG - Chr6:28839764-28839783 None:intergenic 20.0%
!!! TTTAGTATTTTGAAAATGGT+GGG + Chr6:28842385-28842404 MsG0680031876.01.T01:intron 20.0%
!!! TTTCTAGTATTAACATGATA+AGG - Chr6:28845600-28845619 None:intergenic 20.0%
!!! TTTGATTTGAAACAATGTTA+TGG - Chr6:28839981-28840000 None:intergenic 20.0%
! AAAATCGGACATATACAATT+TGG + Chr6:28836577-28836596 MsG0680031876.01.T01:intron 25.0%
! AAAGAATCATCGAAAACAAA+AGG - Chr6:28843307-28843326 None:intergenic 25.0%
! AAAGCACATAAACTTATCAT+TGG - Chr6:28844000-28844019 None:intergenic 25.0%
! AACAATTATAACTGTGACAA+TGG - Chr6:28837199-28837218 None:intergenic 25.0%
! AACATTGTTTCAAATCAAAG+GGG + Chr6:28839982-28840001 MsG0680031876.01.T01:intron 25.0%
! AAGTTATCAATAACTACTAG+TGG + Chr6:28837872-28837891 MsG0680031876.01.T01:intron 25.0%
! AATTACCATCTCTTAATGAT+TGG + Chr6:28843790-28843809 MsG0680031876.01.T01:CDS 25.0%
! ACATATGTTGTGGAAATTTA+TGG + Chr6:28840656-28840675 MsG0680031876.01.T01:intron 25.0%
! ACTCTTAAATTCTCATGAAA+AGG + Chr6:28842141-28842160 MsG0680031876.01.T01:intron 25.0%
! AGGATAAAAGATCTAAGAAA+AGG - Chr6:28843374-28843393 None:intergenic 25.0%
! ATAACTTACACATAGAATCT+CGG - Chr6:28842225-28842244 None:intergenic 25.0%
! ATAGTCAAACTTCATAAGAT+GGG - Chr6:28841420-28841439 None:intergenic 25.0%
! ATATTAACCTAAACTCTTAC+AGG + Chr6:28839474-28839493 MsG0680031876.01.T01:intron 25.0%
! ATCTATTGATCATGTATATG+AGG + Chr6:28845941-28845960 MsG0680031876.01.T01:CDS 25.0%
! ATGATTATAACCTTTGACAA+AGG + Chr6:28839879-28839898 MsG0680031876.01.T01:intron 25.0%
! ATGATTTCAAAATGAAGTCT+TGG - Chr6:28838064-28838083 None:intergenic 25.0%
! ATGGAAGGTGATAAAATTAT+TGG + Chr6:28836846-28836865 MsG0680031876.01.T01:CDS 25.0%
! ATTACCATCTCTTAATGATT+GGG + Chr6:28843791-28843810 MsG0680031876.01.T01:CDS 25.0%
! ATTCAGTGATCTTTCATATA+AGG + Chr6:28843401-28843420 MsG0680031876.01.T01:intron 25.0%
! ATTCCACTTTCACAATTAAT+AGG - Chr6:28838297-28838316 None:intergenic 25.0%
! CAAAATACTAGTATAAAGAG+TGG - Chr6:28839087-28839106 None:intergenic 25.0%
! CACCATTCAAAATAACATAA+TGG + Chr6:28836622-28836641 MsG0680031876.01.T01:intron 25.0%
! CCTATGAAAAGAAATATGTA+AGG - Chr6:28837510-28837529 None:intergenic 25.0%
! CTATAAACGTTGTATTTAAG+AGG - Chr6:28844517-28844536 None:intergenic 25.0%
! CTCTTAAATTCTCATGAAAA+GGG + Chr6:28842142-28842161 MsG0680031876.01.T01:intron 25.0%
! CTTGAATCCATTATTATCAT+TGG + Chr6:28837269-28837288 MsG0680031876.01.T01:intron 25.0%
! CTTTCTACTTTCTAATTTCT+TGG + Chr6:28836921-28836940 MsG0680031876.01.T01:intron 25.0%
! GAAGACTTATAAGAATTGTT+CGG + Chr6:28836112-28836131 MsG0680031876.01.T01:intron 25.0%
! GACAATCTAGTATCAAAATT+TGG - Chr6:28837442-28837461 None:intergenic 25.0%
! GACATATATCATATATTTGC+TGG + Chr6:28842036-28842055 MsG0680031876.01.T01:intron 25.0%
! GATTATAACCTTTGACAAAA+GGG + Chr6:28839881-28839900 MsG0680031876.01.T01:intron 25.0%
! GTATATGGTAACAAATATCA+AGG - Chr6:28838737-28838756 None:intergenic 25.0%
! TAAAACAGGAAAGTTAGAAA+TGG - Chr6:28838525-28838544 None:intergenic 25.0%
! TAAATTTGTAAACTGACAAC+TGG + Chr6:28844775-28844794 MsG0680031876.01.T01:intron 25.0%
! TACAAAAATCATGTAGTAGA+AGG - Chr6:28844047-28844066 None:intergenic 25.0%
! TACAAATGAAAGATATTGCA+AGG - Chr6:28844368-28844387 None:intergenic 25.0%
! TATAATGCACTATAAATGCT+TGG + Chr6:28840029-28840048 MsG0680031876.01.T01:intron 25.0%
! TATGATATATGTCCATTAAG+AGG - Chr6:28842029-28842048 None:intergenic 25.0%
! TCAAGATATACAACAATCTT+TGG + Chr6:28840433-28840452 MsG0680031876.01.T01:intron 25.0%
! TCCAATTGAAATATGATTTG+TGG - Chr6:28845664-28845683 None:intergenic 25.0%
! TCCACAAATCATATTTCAAT+TGG + Chr6:28845660-28845679 MsG0680031876.01.T01:intron 25.0%
! TGATTATAACCTTTGACAAA+AGG + Chr6:28839880-28839899 MsG0680031876.01.T01:intron 25.0%
! TGATTATAACCTTTGACAAA+GGG + Chr6:28839880-28839899 MsG0680031876.01.T01:intron 25.0%
! TGTTGTATATCTTGATTGTT+GGG - Chr6:28840428-28840447 None:intergenic 25.0%
! TTATGTCAAACCTACAATAT+CGG - Chr6:28837412-28837431 None:intergenic 25.0%
! TTCACATTATGTGAATTCTA+GGG + Chr6:28836966-28836985 MsG0680031876.01.T01:intron 25.0%
! TTCAGTGATCTTTCATATAA+GGG + Chr6:28843402-28843421 MsG0680031876.01.T01:intron 25.0%
! TTGTTGTATATCTTGATTGT+TGG - Chr6:28840429-28840448 None:intergenic 25.0%
! TTTAATGACATTTATGTCCT+CGG - Chr6:28845171-28845190 None:intergenic 25.0%
! TTTCACATTATGTGAATTCT+AGG + Chr6:28836965-28836984 MsG0680031876.01.T01:intron 25.0%
!! AAAATGGGAATTGGATTTTT+GGG + Chr6:28837547-28837566 MsG0680031876.01.T01:CDS 25.0%
!! AGCGAAATAAAATTTTACGA+AGG + Chr6:28837241-28837260 MsG0680031876.01.T01:intron 25.0%
!! ATCCTTATATCGTTTAAAAC+AGG - Chr6:28838539-28838558 None:intergenic 25.0%
!! ATTGGTGATCAATTAGATTT+GGG - Chr6:28841853-28841872 None:intergenic 25.0%
!! CCTTACATATTTCTTTTCAT+AGG + Chr6:28837507-28837526 MsG0680031876.01.T01:intron 25.0%
!! CTAATATTTTATGTGATGGT+AGG + Chr6:28845867-28845886 MsG0680031876.01.T01:intron 25.0%
!! GAGTCTAATATTTTATGTGA+TGG + Chr6:28845863-28845882 MsG0680031876.01.T01:intron 25.0%
!! TATGAGGAATTGCTTTATTA+AGG + Chr6:28845957-28845976 MsG0680031876.01.T01:CDS 25.0%
!! TATTGATAACTTAGAAGTGA+CGG - Chr6:28837864-28837883 None:intergenic 25.0%
!! TCTTAGATCTTTTATCCTTT+TGG + Chr6:28843376-28843395 MsG0680031876.01.T01:intron 25.0%
!! TTGTTATTATCATGTCACTT+CGG + Chr6:28838921-28838940 MsG0680031876.01.T01:intron 25.0%
!!! AACTTCTATTTTGGTAATCT+CGG + Chr6:28838324-28838343 MsG0680031876.01.T01:intron 25.0%
!!! ACCCATTATGTTATTTTGAA+TGG - Chr6:28836627-28836646 None:intergenic 25.0%
!!! AGTTGTAATCGTTTTTGTTA+TGG + Chr6:28844896-28844915 MsG0680031876.01.T01:intron 25.0%
!!! ATCTAGGATAACTTCTATTT+TGG + Chr6:28838315-28838334 MsG0680031876.01.T01:intron 25.0%
!!! ATTTTTCTGGGATAAAGTAA+TGG + Chr6:28836827-28836846 MsG0680031876.01.T01:CDS 25.0%
!!! CATGTAAGTTTTTGAAGAAA+TGG + Chr6:28846087-28846106 MsG0680031876.01.T01:three_prime_UTR 25.0%
!!! CATTATGTTATTTTGAATGG+TGG - Chr6:28836624-28836643 None:intergenic 25.0%
!!! CGATTTTTTATAATGGGAAT+TGG + Chr6:28837467-28837486 MsG0680031876.01.T01:intron 25.0%
!!! GTGTTTTGTTAATTTACATG+TGG + Chr6:28840699-28840718 MsG0680031876.01.T01:intron 25.0%
!!! GTTTTTGAAGAAATGGAATA+AGG + Chr6:28846094-28846113 MsG0680031876.01.T01:three_prime_UTR 25.0%
!!! TATGTCTGCTTTTAGATATA+TGG + Chr6:28846054-28846073 MsG0680031876.01.T01:three_prime_UTR 25.0%
!!! TATGTTGATGATGACATTTT+CGG - Chr6:28838364-28838383 None:intergenic 25.0%
!!! TGTAAGTTGATATATGTTCA+TGG + Chr6:28841185-28841204 MsG0680031876.01.T01:intron 25.0%
!!! TTAGTATTTTGAAAATGGTG+GGG + Chr6:28842386-28842405 MsG0680031876.01.T01:intron 25.0%
!!! TTCCTGTTTTAAACGATATA+AGG + Chr6:28838534-28838553 MsG0680031876.01.T01:intron 25.0%
!!! TTTGTTTTCGATGATTCTTT+CGG + Chr6:28843307-28843326 MsG0680031876.01.T01:CDS 25.0%
!!! TTTGTTTTTGTTTTTGCTGT+AGG + Chr6:28843731-28843750 MsG0680031876.01.T01:intron 25.0%
AAAACTACCTTTGGTATCAT+AGG - Chr6:28837610-28837629 None:intergenic 30.0%
AAACAAACATTCAATTCGCT+CGG - Chr6:28843718-28843737 None:intergenic 30.0%
AAACCTACAATTAGAGAGTT+TGG - Chr6:28843507-28843526 None:intergenic 30.0%
AAAGTTAGAGAAGAAACTGT+TGG - Chr6:28843197-28843216 None:intergenic 30.0%
AAATCGAACCTAAAGATTGT+TGG - Chr6:28840538-28840557 None:intergenic 30.0%
AACGTTGTATTTAAGAGGAT+TGG - Chr6:28844512-28844531 None:intergenic 30.0%
AACTCAAACTTGAGTCATTA+AGG - Chr6:28845090-28845109 None:intergenic 30.0%
AAGATCCATCTTGTTGATAT+AGG - Chr6:28836143-28836162 None:intergenic 30.0%
AATACTAGTATAAAGAGTGG+TGG - Chr6:28839084-28839103 None:intergenic 30.0%
AATCATTCATTTCGTCACTT+CGG + Chr6:28838898-28838917 MsG0680031876.01.T01:intron 30.0%
AATGATTGGGAGAATCATTT+GGG + Chr6:28843804-28843823 MsG0680031876.01.T01:CDS 30.0%
AATTCTCATAGCTATGTCTA+TGG - Chr6:28841683-28841702 None:intergenic 30.0%
ACAATGCAAGTAGAGAATTT+GGG - Chr6:28845736-28845755 None:intergenic 30.0%
ACCAATATAAAACAAACCTC+AGG - Chr6:28843840-28843859 None:intergenic 30.0%
ACTAAGAAGGATCAGATATA+TGG - Chr6:28844128-28844147 None:intergenic 30.0%
ACTATAAATGCTTGGCATTT+GGG + Chr6:28840037-28840056 MsG0680031876.01.T01:intron 30.0%
ACTGTATATTGGATGCAATA+AGG - Chr6:28840297-28840316 None:intergenic 30.0%
ATACACTTGAATCAATGCAA+AGG - Chr6:28839918-28839937 None:intergenic 30.0%
ATACTAGTATAAAGAGTGGT+GGG - Chr6:28839083-28839102 None:intergenic 30.0%
ATATATCTGATCCTTCTTAG+TGG + Chr6:28844127-28844146 MsG0680031876.01.T01:intron 30.0%
ATCATCAACATACACAAGTA+AGG + Chr6:28838372-28838391 MsG0680031876.01.T01:intron 30.0%
ATCCAATATACAGTTATTGG+TGG + Chr6:28840303-28840322 MsG0680031876.01.T01:intron 30.0%
ATCTATGAACTGCTTCAATT+TGG + Chr6:28844201-28844220 MsG0680031876.01.T01:intron 30.0%
ATTAAACATCCCTTTGTCAA+AGG - Chr6:28839951-28839970 None:intergenic 30.0%
ATTAAATACAACAGTCAAGC+AGG + Chr6:28844448-28844467 MsG0680031876.01.T01:intron 30.0%
ATTAAGAGATGGTAATTCAC+CGG - Chr6:28843787-28843806 None:intergenic 30.0%
ATTCATCTTCATCATCTTCT+TGG + Chr6:28840479-28840498 MsG0680031876.01.T01:intron 30.0%
ATTTGACGAAATGATTGACA+AGG + Chr6:28841766-28841785 MsG0680031876.01.T01:intron 30.0%
CAAAAGTTGTAACTCTTCAT+GGG + Chr6:28839786-28839805 MsG0680031876.01.T01:intron 30.0%
CAAAGTGACAATATATCTCA+AGG + Chr6:28837960-28837979 MsG0680031876.01.T01:intron 30.0%
CAAATAGCAGAATTGCTAAA+TGG + Chr6:28836792-28836811 MsG0680031876.01.T01:CDS 30.0%
CAAATCTAATTGATCACCAA+TGG + Chr6:28841852-28841871 MsG0680031876.01.T01:intron 30.0%
CACTTCTATGCTGTTAAAAA+AGG - Chr6:28839141-28839160 None:intergenic 30.0%
CACTTGTTCTAATGAATAGT+TGG + Chr6:28842248-28842267 MsG0680031876.01.T01:intron 30.0%
CATAGTCAAACTTCATAAGA+TGG - Chr6:28841421-28841440 None:intergenic 30.0%
CATTTCATTCTGATGTGATT+CGG - Chr6:28836052-28836071 None:intergenic 30.0%
CATTTGTCTATGACTAAATG+AGG + Chr6:28836680-28836699 MsG0680031876.01.T01:intron 30.0%
CTCAGTTTACATACTTGATT+AGG + Chr6:28838562-28838581 MsG0680031876.01.T01:intron 30.0%
CTGGTTGTGATATGAATATT+AGG + Chr6:28845331-28845350 MsG0680031876.01.T01:intron 30.0%
CTTACAAGTCTCTTTATCAA+TGG + Chr6:28842197-28842216 MsG0680031876.01.T01:intron 30.0%
CTTGAGAAGAGTTTATATAG+AGG + Chr6:28838666-28838685 MsG0680031876.01.T01:intron 30.0%
CTTTAATGGTTCAATTCAAC+TGG + Chr6:28839239-28839258 MsG0680031876.01.T01:intron 30.0%
GATAAGTTTATGTGCTTTAC+CGG + Chr6:28844002-28844021 MsG0680031876.01.T01:CDS 30.0%
GATAGTCTATAGCTGAAATA+AGG - Chr6:28845547-28845566 None:intergenic 30.0%
GCTATTTGCTCATACTTAAT+AGG - Chr6:28836780-28836799 None:intergenic 30.0%
GGAGAAATAAAAACTACCTT+TGG - Chr6:28837619-28837638 None:intergenic 30.0%
GGTAGATCCAATGATAATAA+TGG - Chr6:28837279-28837298 None:intergenic 30.0%
TAATGATTGGGAGAATCATT+TGG + Chr6:28843803-28843822 MsG0680031876.01.T01:CDS 30.0%
TAATTGTGAAAGTGGAATCT+AGG + Chr6:28838299-28838318 MsG0680031876.01.T01:intron 30.0%
TACTACCTATATCAACAAGA+TGG + Chr6:28836135-28836154 MsG0680031876.01.T01:intron 30.0%
TAGCAATATGTAATGCACTT+TGG + Chr6:28838014-28838033 MsG0680031876.01.T01:intron 30.0%
TATAGCAAAATGACTTAAGC+AGG + Chr6:28845055-28845074 MsG0680031876.01.T01:intron 30.0%
TATTAACATGATAAGGCACA+CGG - Chr6:28845593-28845612 None:intergenic 30.0%
TATTAGATTTGACAGCAGAT+TGG + Chr6:28844298-28844317 MsG0680031876.01.T01:CDS 30.0%
TATTTGGACTGATGTTGATA+AGG + Chr6:28843264-28843283 MsG0680031876.01.T01:CDS 30.0%
TCAAAAGTTGTAACTCTTCA+TGG + Chr6:28839785-28839804 MsG0680031876.01.T01:intron 30.0%
TCCAATATACAGTTATTGGT+GGG + Chr6:28840304-28840323 MsG0680031876.01.T01:intron 30.0%
TCTCTAACTTTGCTTGATTA+AGG + Chr6:28843206-28843225 MsG0680031876.01.T01:intron 30.0%
TGCATCCAATATACAGTTAT+TGG + Chr6:28840300-28840319 MsG0680031876.01.T01:intron 30.0%
TGGGAATCATTCATATACAT+TGG + Chr6:28839805-28839824 MsG0680031876.01.T01:intron 30.0%
TGTAAGATGACACATTAAGA+AGG - Chr6:28842183-28842202 None:intergenic 30.0%
TGTAGGTTTGACATAATAGA+TGG + Chr6:28837416-28837435 MsG0680031876.01.T01:intron 30.0%
TTAAACGTCTAACTACCATT+AGG + Chr6:28845186-28845205 MsG0680031876.01.T01:intron 30.0%
TTGCAGCTTATGAAATGAAA+TGG - Chr6:28838103-28838122 None:intergenic 30.0%
TTGCCTATTAATTGTGAAAG+TGG + Chr6:28838291-28838310 MsG0680031876.01.T01:intron 30.0%
TTGGACCATAAGAAGAAAAA+GGG + Chr6:28841989-28842008 MsG0680031876.01.T01:intron 30.0%
TTTCCAAACTCTCTAATTGT+AGG + Chr6:28843501-28843520 MsG0680031876.01.T01:intron 30.0%
! AAATGGGAATTGGATTTTTG+GGG + Chr6:28837548-28837567 MsG0680031876.01.T01:CDS 30.0%
! ATTTTTGAATGTAGTAGCTG+AGG + Chr6:28845462-28845481 MsG0680031876.01.T01:CDS 30.0%
! CATTGGTGATCAATTAGATT+TGG - Chr6:28841854-28841873 None:intergenic 30.0%
! CCATTTTCATTTGACACTTT+TGG - Chr6:28844618-28844637 None:intergenic 30.0%
! CGTTTTATGAACATATGTTG+TGG + Chr6:28840646-28840665 MsG0680031876.01.T01:intron 30.0%
! GAAAATGGGAATTGGATTTT+TGG + Chr6:28837546-28837565 MsG0680031876.01.T01:CDS 30.0%
! GATTTAGAGTAAGAGAATGA+TGG - Chr6:28840137-28840156 None:intergenic 30.0%
! GCTTTACTTGGAACAATTTT+GGG + Chr6:28836205-28836224 MsG0680031876.01.T01:intron 30.0%
! GTAATTTTTCTGATTGTTCC+AGG + Chr6:28844239-28844258 MsG0680031876.01.T01:intron 30.0%
! TACATTTTCATCCATGACTA+CGG + Chr6:28840606-28840625 MsG0680031876.01.T01:intron 30.0%
! TAGCTGTCTTGGTAATAAAA+AGG - Chr6:28845792-28845811 None:intergenic 30.0%
! TGATTAATGGCTGCAATTTT+AGG + Chr6:28840570-28840589 MsG0680031876.01.T01:intron 30.0%
! TGCTTTACTTGGAACAATTT+TGG + Chr6:28836204-28836223 MsG0680031876.01.T01:intron 30.0%
! TGTCATAGTTTGATGATAGT+TGG + Chr6:28841628-28841647 MsG0680031876.01.T01:intron 30.0%
! TTCCAATGTGTTTTGTCTAT+CGG + Chr6:28843555-28843574 MsG0680031876.01.T01:CDS 30.0%
! TTGTTTTCGATGATTCTTTC+GGG + Chr6:28843308-28843327 MsG0680031876.01.T01:CDS 30.0%
!! AGAAACAAAGCATTGATTCA+AGG - Chr6:28838160-28838179 None:intergenic 30.0%
!! CAAAATAACATAATGGGTAC+TGG + Chr6:28836629-28836648 MsG0680031876.01.T01:intron 30.0%
!! CCAAAAGTGTCAAATGAAAA+TGG + Chr6:28844615-28844634 MsG0680031876.01.T01:intron 30.0%
!! GTTGGTGATTTCCAAAATAA+TGG + Chr6:28839750-28839769 MsG0680031876.01.T01:intron 30.0%
!! TAGTATTTTGAAAATGGTGG+GGG + Chr6:28842387-28842406 MsG0680031876.01.T01:intron 30.0%
!! TCTAGCTTACTTAAGCTTTT+AGG - Chr6:28844401-28844420 None:intergenic 30.0%
!! TGTAATCGTTTTTGTTATGG+TGG + Chr6:28844899-28844918 MsG0680031876.01.T01:intron 30.0%
!!! ATTGGTTTTGTAATCCAGAA+AGG - Chr6:28844494-28844513 None:intergenic 30.0%
!!! CTTTTTTAACAGCATAGAAG+TGG + Chr6:28839139-28839158 MsG0680031876.01.T01:intron 30.0%
!!! TCCTGAGGTTTGTTTTATAT+TGG + Chr6:28843836-28843855 MsG0680031876.01.T01:intron 30.0%
AAACTGTTGGATCTTGTGTT+GGG - Chr6:28843184-28843203 None:intergenic 35.0%
AAAGCTGTTGCTGAGAAAAT+GGG + Chr6:28837532-28837551 MsG0680031876.01.T01:CDS 35.0%
AAATTCCATGCCTTCAGTAA+TGG - Chr6:28842351-28842370 None:intergenic 35.0%
AACAAATACATGCCCAAAGT+TGG + Chr6:28839308-28839327 MsG0680031876.01.T01:CDS 35.0%
AACATACACAAGTAAGGTTG+TGG + Chr6:28838378-28838397 MsG0680031876.01.T01:intron 35.0%
AACCCTATGGTATATGTTAG+CGG + Chr6:28838599-28838618 MsG0680031876.01.T01:intron 35.0%
AAGACAAATGCTGAGGAATA+AGG + Chr6:28844332-28844351 MsG0680031876.01.T01:CDS 35.0%
AAGAGATATTTGGAGATGAG+AGG + Chr6:28843961-28843980 MsG0680031876.01.T01:CDS 35.0%
AAGAGGAAAAATCATCTCAC+TGG - Chr6:28838790-28838809 None:intergenic 35.0%
AAGATCACTGAATCACCAAA+AGG - Chr6:28843394-28843413 None:intergenic 35.0%
AAGATTGTTGGATCTTGTGT+TGG - Chr6:28840526-28840545 None:intergenic 35.0%
AATGATTGCATTAGCTGTCT+TGG - Chr6:28845803-28845822 None:intergenic 35.0%
ACAATAGATAACATCCCAAG+GGG + Chr6:28841957-28841976 MsG0680031876.01.T01:intron 35.0%
ACACAAACATTACTCTATCC+AGG + Chr6:28843930-28843949 MsG0680031876.01.T01:intron 35.0%
ACCATAAGAAGAAAAAGGGT+AGG + Chr6:28841993-28842012 MsG0680031876.01.T01:intron 35.0%
ACCTATGTGAGAATGAAGTT+TGG + Chr6:28842093-28842112 MsG0680031876.01.T01:intron 35.0%
ACCTTCTACAAAGAGTTCAA+AGG - Chr6:28844572-28844591 None:intergenic 35.0%
ACTGGCATATGTTTCATTCT+TGG - Chr6:28838209-28838228 None:intergenic 35.0%
ACTGTGGATTTCTTATGGAA+TGG - Chr6:28836178-28836197 None:intergenic 35.0%
AGAACAACAACACACAACTT+TGG + Chr6:28840079-28840098 MsG0680031876.01.T01:intron 35.0%
AGAATCATATCTATCCGATG+TGG - Chr6:28838648-28838667 None:intergenic 35.0%
AGATCTATATTCTACCACAC+TGG + Chr6:28838130-28838149 MsG0680031876.01.T01:intron 35.0%
AGATTGACCTGTAAGAGTTT+AGG - Chr6:28839484-28839503 None:intergenic 35.0%
AGATTGTTGGATCTTGTGTT+GGG - Chr6:28840525-28840544 None:intergenic 35.0%
ATATCTTGATTGTTGGGAAG+AGG - Chr6:28840422-28840441 None:intergenic 35.0%
ATCATTGGATCTACCGAAAT+CGG + Chr6:28837284-28837303 MsG0680031876.01.T01:intron 35.0%
ATCGAACCTAAAGGTTAGTA+TGG + Chr6:28840332-28840351 MsG0680031876.01.T01:intron 35.0%
ATCTAAAAGCAGACATAACC+AGG - Chr6:28846051-28846070 None:intergenic 35.0%
ATCTAATTGATCACCAATGG+TGG + Chr6:28841855-28841874 MsG0680031876.01.T01:intron 35.0%
ATGCAAGACTAACTTGATAG+AGG - Chr6:28837088-28837107 None:intergenic 35.0%
ATGCATCACTATTATCTGCT+TGG - Chr6:28845212-28845231 None:intergenic 35.0%
ATGGGTTTGTCATTATGAGA+AGG + Chr6:28839698-28839717 MsG0680031876.01.T01:CDS 35.0%
ATGTAAACTCAAAGCGTATG+GGG - Chr6:28840361-28840380 None:intergenic 35.0%
CAATATACAGTTATTGGTGG+GGG + Chr6:28840306-28840325 MsG0680031876.01.T01:intron 35.0%
CAATGCAAGTAGAGAATTTG+GGG - Chr6:28845735-28845754 None:intergenic 35.0%
CACAAGATCCAACAATCTTT+AGG + Chr6:28840527-28840546 MsG0680031876.01.T01:intron 35.0%
CACAATGCAAGTAGAGAATT+TGG - Chr6:28845737-28845756 None:intergenic 35.0%
CACTATAAATGCTTGGCATT+TGG + Chr6:28840036-28840055 MsG0680031876.01.T01:intron 35.0%
CATACTTGATTAGGTTTCTG+AGG + Chr6:28838571-28838590 MsG0680031876.01.T01:intron 35.0%
CATCAACAATATCTACAGGA+TGG + Chr6:28845409-28845428 MsG0680031876.01.T01:intron 35.0%
CATCATATAATAACCCTACC+TGG - Chr6:28844260-28844279 None:intergenic 35.0%
CATCCTGTAGATATTGTTGA+TGG - Chr6:28845411-28845430 None:intergenic 35.0%
CATGTAAACTCAAAGCGTAT+GGG - Chr6:28840362-28840381 None:intergenic 35.0%
CCAATATACAGTTATTGGTG+GGG + Chr6:28840305-28840324 MsG0680031876.01.T01:intron 35.0%
CCTCTTTATAAACTCTTCTC+AGG - Chr6:28837322-28837341 None:intergenic 35.0%
CCTGAGAAGAGTTTATAAAG+AGG + Chr6:28837319-28837338 MsG0680031876.01.T01:intron 35.0%
CCTTCTACAAAGAGTTCAAA+GGG - Chr6:28844571-28844590 None:intergenic 35.0%
CGAATCACATCAGAATGAAA+TGG + Chr6:28836050-28836069 MsG0680031876.01.T01:CDS 35.0%
CTAACTCATCCTTACAAAAC+CGG - Chr6:28837366-28837385 None:intergenic 35.0%
CTCACATAGGTAGACTATAT+CGG - Chr6:28842084-28842103 None:intergenic 35.0%
CTCATAATGACAAACCCATT+GGG - Chr6:28839697-28839716 None:intergenic 35.0%
CTCATGCATTAGAGAATTGA+TGG - Chr6:28840162-28840181 None:intergenic 35.0%
CTGTAGTATGCTTTCATGTA+GGG - Chr6:28845307-28845326 None:intergenic 35.0%
CTTCCATCAACAATATCTAC+AGG + Chr6:28845405-28845424 MsG0680031876.01.T01:intron 35.0%
CTTGGACCATAAGAAGAAAA+AGG + Chr6:28841988-28842007 MsG0680031876.01.T01:intron 35.0%
GAAAAGGGATATATGACACA+AGG + Chr6:28842157-28842176 MsG0680031876.01.T01:intron 35.0%
GAAGGATCAGATATATGGAT+CGG - Chr6:28844123-28844142 None:intergenic 35.0%
GAATCATATCTATCCGATGT+GGG - Chr6:28838647-28838666 None:intergenic 35.0%
GAATCCTATCTATCCGATTT+CGG - Chr6:28837300-28837319 None:intergenic 35.0%
GACAATAGATAACATCCCAA+GGG + Chr6:28841956-28841975 MsG0680031876.01.T01:intron 35.0%
GAGAAGAGTTTATAAAGAGG+AGG + Chr6:28837322-28837341 MsG0680031876.01.T01:intron 35.0%
GAGAAGAGTTTATATAGAGG+AGG + Chr6:28838669-28838688 MsG0680031876.01.T01:intron 35.0%
GATATAGATCCTCTCAGAAT+AGG - Chr6:28844101-28844120 None:intergenic 35.0%
GCTTAACTGTGGATTTCTTA+TGG - Chr6:28836183-28836202 None:intergenic 35.0%
GGCAAGTTAAAATGCTTTCT+TGG - Chr6:28838276-28838295 None:intergenic 35.0%
GGTTGTCAATCTAAAAGACT+GGG + Chr6:28838035-28838054 MsG0680031876.01.T01:intron 35.0%
TAAACTCTTACAGGTCAATC+TGG + Chr6:28839483-28839502 MsG0680031876.01.T01:intron 35.0%
TAAAGCTGTTGCTGAGAAAA+TGG + Chr6:28837531-28837550 MsG0680031876.01.T01:CDS 35.0%
TACAAGTTACATGAACAGCA+GGG - Chr6:28843677-28843696 None:intergenic 35.0%
TATATGGAGCAAGTCATGTT+AGG + Chr6:28839197-28839216 MsG0680031876.01.T01:intron 35.0%
TCATTCCCAAATAGTATGGT+AGG - Chr6:28842285-28842304 None:intergenic 35.0%
TCTCATAATGACAAACCCAT+TGG - Chr6:28839698-28839717 None:intergenic 35.0%
TCTGTAGTATGCTTTCATGT+AGG - Chr6:28845308-28845327 None:intergenic 35.0%
TGAAGACATTATTAGGGATG+TGG + Chr6:28841821-28841840 MsG0680031876.01.T01:intron 35.0%
TGACAATAGATAACATCCCA+AGG + Chr6:28841955-28841974 MsG0680031876.01.T01:intron 35.0%
TGGAATTGTATCATGGAAAG+TGG + Chr6:28845913-28845932 MsG0680031876.01.T01:CDS 35.0%
TGGTTGTCAATCTAAAAGAC+TGG + Chr6:28838034-28838053 MsG0680031876.01.T01:intron 35.0%
TGTAATCCAGAAAGGATTAG+TGG - Chr6:28844486-28844505 None:intergenic 35.0%
TGTAGTATGCTTTCATGTAG+GGG - Chr6:28845306-28845325 None:intergenic 35.0%
TTAAGAGATGGTAATTCACC+GGG - Chr6:28843786-28843805 None:intergenic 35.0%
TTCAGCAGAAGATGTGTATA+TGG - Chr6:28838752-28838771 None:intergenic 35.0%
TTCAGTAAACCATCTCGAAA+TGG - Chr6:28844839-28844858 None:intergenic 35.0%
TTCCGATAGACAAAACACAT+TGG - Chr6:28843560-28843579 None:intergenic 35.0%
TTCTCCCAATCATTAAGAGA+TGG - Chr6:28843798-28843817 None:intergenic 35.0%
TTCTTCATAAGTCTGATGCA+GGG - Chr6:28837054-28837073 None:intergenic 35.0%
TTGACAAGGAATGATGTCTT+TGG + Chr6:28841780-28841799 MsG0680031876.01.T01:intron 35.0%
TTGCTGGAATGCATACTTAT+GGG + Chr6:28842052-28842071 MsG0680031876.01.T01:intron 35.0%
TTTCTTCATAAGTCTGATGC+AGG - Chr6:28837055-28837074 None:intergenic 35.0%
TTTGCTGGAATGCATACTTA+TGG + Chr6:28842051-28842070 MsG0680031876.01.T01:intron 35.0%
! AAGATCTAAGAAAAGGCATG+AGG - Chr6:28843367-28843386 None:intergenic 35.0%
! ATTAAGCACCCTTTTGTCAA+AGG - Chr6:28839892-28839911 None:intergenic 35.0%
! CATTGCTGAGAGATTTTTCT+GGG + Chr6:28836815-28836834 MsG0680031876.01.T01:CDS 35.0%
! GCATAACGATCAAACTTTTC+AGG + Chr6:28840381-28840400 MsG0680031876.01.T01:intron 35.0%
! GGTACTGAACATGAAAAGTT+TGG + Chr6:28836732-28836751 MsG0680031876.01.T01:CDS 35.0%
! GGTGTTTTCTCTCATATGAA+GGG + Chr6:28840003-28840022 MsG0680031876.01.T01:intron 35.0%
! GTAGAGTGTTTGTAAAACCT+AGG + Chr6:28846016-28846035 MsG0680031876.01.T01:three_prime_UTR 35.0%
! TCCTACCCTTTTTCTTCTTA+TGG - Chr6:28841997-28842016 None:intergenic 35.0%
! TTGGCTCTTCTCAAATATCA+TGG - Chr6:28838190-28838209 None:intergenic 35.0%
! TTTTCTGATTGTTCCAGGTA+GGG + Chr6:28844244-28844263 MsG0680031876.01.T01:intron 35.0%
! TTTTTCTGATTGTTCCAGGT+AGG + Chr6:28844243-28844262 MsG0680031876.01.T01:intron 35.0%
!! TACTTGGAACAATTTTGGGA+TGG + Chr6:28836209-28836228 MsG0680031876.01.T01:intron 35.0%
!! TCGTTTTTGTTATGGTGGTT+TGG + Chr6:28844904-28844923 MsG0680031876.01.T01:intron 35.0%
!! TCTGAATTTTTGTTGTGCTC+AGG + Chr6:28839268-28839287 MsG0680031876.01.T01:intron 35.0%
!! TTCTGGGATAAAGTAATGGA+AGG + Chr6:28836831-28836850 MsG0680031876.01.T01:CDS 35.0%
!! TTGTCACTTTGTACGAAACA+AGG - Chr6:28837951-28837970 None:intergenic 35.0%
!!! ACTTGGAACAATTTTGGGAT+GGG + Chr6:28836210-28836229 MsG0680031876.01.T01:intron 35.0%
!!! TATTTTGGTAATCTCGGCAA+GGG + Chr6:28838330-28838349 MsG0680031876.01.T01:intron 35.0%
!!! TGGTTTTGTAAGGATGAGTT+AGG + Chr6:28838711-28838730 MsG0680031876.01.T01:intron 35.0%
AAACCTAGGCTATATAGTCC+TGG + Chr6:28846030-28846049 MsG0680031876.01.T01:three_prime_UTR 40.0%
AACACTCTACGCAAAAAGAG+TGG - Chr6:28846006-28846025 None:intergenic 40.0%
AACATTACTCTATCCAGGTC+AGG + Chr6:28843935-28843954 MsG0680031876.01.T01:intron 40.0%
AACTGTTGGATCTTGTGTTG+GGG - Chr6:28843183-28843202 None:intergenic 40.0%
AAGGCATGAGGCCTAATATT+AGG - Chr6:28843355-28843374 None:intergenic 40.0%
AAGTAAAGCACGCTTAACTG+TGG - Chr6:28836194-28836213 None:intergenic 40.0%
AATATCTCTTTAGCCTGACC+TGG - Chr6:28843951-28843970 None:intergenic 40.0%
ACAATATCTACAGGATGGCT+TGG + Chr6:28845414-28845433 MsG0680031876.01.T01:intron 40.0%
ACAGTTAAGCGTGCTTTACT+TGG + Chr6:28836193-28836212 MsG0680031876.01.T01:intron 40.0%
ACTTGAGTAGCATCAAGTCT+TGG + Chr6:28841891-28841910 MsG0680031876.01.T01:intron 40.0%
ACTTGATGCTACTCAAGTGT+GGG - Chr6:28841889-28841908 None:intergenic 40.0%
AGAAGAAAAAGGGTAGGATG+AGG + Chr6:28841999-28842018 MsG0680031876.01.T01:intron 40.0%
AGACATGCCTATGATACCAA+AGG + Chr6:28837600-28837619 MsG0680031876.01.T01:CDS 40.0%
AGATACCATTACTGAAGGCA+TGG + Chr6:28842343-28842362 MsG0680031876.01.T01:intron 40.0%
AGCTTGCCTACCATACTATT+TGG + Chr6:28842276-28842295 MsG0680031876.01.T01:intron 40.0%
AGGAACTCATAGTATCCTGA+AGG + Chr6:28840255-28840274 MsG0680031876.01.T01:intron 40.0%
ATACTGTTAGGAGATACGCT+TGG + Chr6:28840210-28840229 MsG0680031876.01.T01:intron 40.0%
ATATGTTAGCGGCCAAAACT+CGG + Chr6:28838610-28838629 MsG0680031876.01.T01:intron 40.0%
ATGTCTTTGAGTCCAGACTT+TGG - Chr6:28837586-28837605 None:intergenic 40.0%
ATTGGGCTTTCCATTTGTGA+AGG - Chr6:28839680-28839699 None:intergenic 40.0%
ATTGTTGGATCTTGTGTTGG+GGG - Chr6:28840523-28840542 None:intergenic 40.0%
CAAAACATATCATTGGAGCC+AGG + Chr6:28836993-28837012 MsG0680031876.01.T01:CDS 40.0%
CAGAAGAAAGACAAATGCTG+AGG + Chr6:28844325-28844344 MsG0680031876.01.T01:CDS 40.0%
CCCCACCAATAACTGTATAT+TGG - Chr6:28840308-28840327 None:intergenic 40.0%
CCCTTTGAACTCTTTGTAGA+AGG + Chr6:28844568-28844587 MsG0680031876.01.T01:intron 40.0%
CCTTACAAAACCAGCTTGTA+TGG - Chr6:28838704-28838723 None:intergenic 40.0%
CTAAAGACACCATTTCGAGA+TGG + Chr6:28844827-28844846 MsG0680031876.01.T01:CDS 40.0%
CTAATGCATGAGTGAATTGC+TGG + Chr6:28840170-28840189 MsG0680031876.01.T01:intron 40.0%
CTACAAGTTACATGAACAGC+AGG - Chr6:28843678-28843697 None:intergenic 40.0%
CTATTATCTGCTTGGCCTAA+TGG - Chr6:28845204-28845223 None:intergenic 40.0%
CTTGAGTAGCATCAAGTCTT+GGG + Chr6:28841892-28841911 MsG0680031876.01.T01:intron 40.0%
GAAACTGTTGGATCTTGTGT+TGG - Chr6:28843185-28843204 None:intergenic 40.0%
GAACTCATAGTATCCTGAAG+GGG + Chr6:28840257-28840276 MsG0680031876.01.T01:intron 40.0%
GATACCAGAAGATCTATCAC+TGG - Chr6:28838227-28838246 None:intergenic 40.0%
GATTGTTGGATCTTGTGTTG+GGG - Chr6:28840524-28840543 None:intergenic 40.0%
GCAAATTCACCCTTCACAAA+TGG + Chr6:28839667-28839686 MsG0680031876.01.T01:CDS 40.0%
GCATGTAAACTCAAAGCGTA+TGG - Chr6:28840363-28840382 None:intergenic 40.0%
GCCAAACTTCATTCTCACAT+AGG - Chr6:28842097-28842116 None:intergenic 40.0%
GCTAGATAGAGTCCCAAAAA+CGG + Chr6:28844415-28844434 MsG0680031876.01.T01:intron 40.0%
GCTGTTGCTATCTGTTATGA+AGG - Chr6:28839640-28839659 None:intergenic 40.0%
GCTTGCCTACCATACTATTT+GGG + Chr6:28842277-28842296 MsG0680031876.01.T01:intron 40.0%
GGAACTCATAGTATCCTGAA+GGG + Chr6:28840256-28840275 MsG0680031876.01.T01:intron 40.0%
GGGCAAGCAAAACATATCAT+TGG + Chr6:28836986-28837005 MsG0680031876.01.T01:intron 40.0%
GGTCAGGCTAAAGAGATATT+TGG + Chr6:28843951-28843970 MsG0680031876.01.T01:intron 40.0%
GTCACATAACCTATTCTGAG+AGG + Chr6:28844089-28844108 MsG0680031876.01.T01:intron 40.0%
GTTGCTGAGAAAATGGGAAT+TGG + Chr6:28837538-28837557 MsG0680031876.01.T01:CDS 40.0%
TAACCAGGACTATATAGCCT+AGG - Chr6:28846036-28846055 None:intergenic 40.0%
TATGACTGTTAGAGGTGGTT+AGG - Chr6:28837840-28837859 None:intergenic 40.0%
TATGCCAGTGATAGATCTTC+TGG + Chr6:28838220-28838239 MsG0680031876.01.T01:intron 40.0%
TCACAAATGGAAAGCCCAAT+GGG + Chr6:28839680-28839699 MsG0680031876.01.T01:CDS 40.0%
TCGCTCATTCCCAAATAGTA+TGG - Chr6:28842289-28842308 None:intergenic 40.0%
TCTACCGAAATCGGATAGAT+AGG + Chr6:28837293-28837312 MsG0680031876.01.T01:intron 40.0%
TGATCTTCTGTGGATCAACA+TGG - Chr6:28837798-28837817 None:intergenic 40.0%
TGCTGGAATGCATACTTATG+GGG + Chr6:28842053-28842072 MsG0680031876.01.T01:intron 40.0%
TGGATGCAATAAGGAATGAC+CGG - Chr6:28840288-28840307 None:intergenic 40.0%
TTCAAGGACATGCAACAATG+AGG - Chr6:28837640-28837659 None:intergenic 40.0%
TTCACAAATGGAAAGCCCAA+TGG + Chr6:28839679-28839698 MsG0680031876.01.T01:CDS 40.0%
TTCAGTACCTATTCTGCAAG+AGG - Chr6:28836721-28836740 None:intergenic 40.0%
TTCATGTCCTCTTGCAGAAT+AGG + Chr6:28836711-28836730 MsG0680031876.01.T01:CDS 40.0%
TTGGGCTTTCCATTTGTGAA+GGG - Chr6:28839679-28839698 None:intergenic 40.0%
TTTGAATGTAGTAGCTGAGG+TGG + Chr6:28845465-28845484 MsG0680031876.01.T01:CDS 40.0%
TTTGGGCACTATATTTCCTG+AGG + Chr6:28843821-28843840 MsG0680031876.01.T01:CDS 40.0%
! AAAGAGAGTGTGATCATGAG+AGG + Chr6:28838453-28838472 MsG0680031876.01.T01:intron 40.0%
! AAGAAACACATCGACTGTAC+TGG + Chr6:28843581-28843600 MsG0680031876.01.T01:CDS 40.0%
! ATGTGCTTTACCGGCATTTT+GGG + Chr6:28844011-28844030 MsG0680031876.01.T01:CDS 40.0%
! CTAAGCCTTATCCACTAAGA+AGG - Chr6:28844141-28844160 None:intergenic 40.0%
! CTGATCCTTCTTAGTGGATA+AGG + Chr6:28844133-28844152 MsG0680031876.01.T01:intron 40.0%
! GCATTGCTGAGAGATTTTTC+TGG + Chr6:28836814-28836833 MsG0680031876.01.T01:CDS 40.0%
! GGATGAGGTTTTCCTCTTAA+TGG + Chr6:28842014-28842033 MsG0680031876.01.T01:intron 40.0%
! GGGTGTTTTCTCTCATATGA+AGG + Chr6:28840002-28840021 MsG0680031876.01.T01:intron 40.0%
! GGTTAGGAAACAGTTAGCTT+AGG - Chr6:28837824-28837843 None:intergenic 40.0%
! TACTGAAGGCATGGAATTTC+CGG + Chr6:28842352-28842371 MsG0680031876.01.T01:intron 40.0%
! TATGTGCTTTACCGGCATTT+TGG + Chr6:28844010-28844029 MsG0680031876.01.T01:CDS 40.0%
! TCCAAGTACTTTTACCCCTT+GGG - Chr6:28841974-28841993 None:intergenic 40.0%
! TGGTGTCTTTAGACCAGTTT+TGG - Chr6:28844819-28844838 None:intergenic 40.0%
!! AAAAGACTCGTGTTGGTTTG+TGG + Chr6:28836285-28836304 MsG0680031876.01.T01:intron 40.0%
!! AAAGACTCGTGTTGGTTTGT+GGG + Chr6:28836286-28836305 MsG0680031876.01.T01:intron 40.0%
!! AGAGGTTCTAAAGTTGGCAA+AGG + Chr6:28844871-28844890 MsG0680031876.01.T01:CDS 40.0%
!! CCTTACAAAACCGGCTTTTA+CGG - Chr6:28837357-28837376 None:intergenic 40.0%
!! CGGTGCCATGTAAAGAAAAT+CGG - Chr6:28837392-28837411 None:intergenic 40.0%
!! CGGTTTTGTAAGGATGAGTT+AGG + Chr6:28837364-28837383 MsG0680031876.01.T01:intron 40.0%
!! GGAATTGGATTTTTGGGGAT+AGG + Chr6:28837553-28837572 MsG0680031876.01.T01:CDS 40.0%
!! GTTTTTGCTGTAGGACTTCT+TGG + Chr6:28843740-28843759 MsG0680031876.01.T01:intron 40.0%
!! TGCTGAAGAGGTTCTAAAGT+TGG + Chr6:28844865-28844884 MsG0680031876.01.T01:CDS 40.0%
!! TTACATGGCACCGATATTGT+AGG + Chr6:28837399-28837418 MsG0680031876.01.T01:intron 40.0%
!! TTTGTTATGGTGGTTTGGTG+TGG + Chr6:28844909-28844928 MsG0680031876.01.T01:intron 40.0%
!!! AGGCACCGATTTTCTTTACA+TGG + Chr6:28837384-28837403 MsG0680031876.01.T01:intron 40.0%
!!! CCATACAAGCTGGTTTTGTA+AGG + Chr6:28838701-28838720 MsG0680031876.01.T01:intron 40.0%
!!! CTATTTTGGTAATCTCGGCA+AGG + Chr6:28838329-28838348 MsG0680031876.01.T01:intron 40.0%
!!! GCTTGTTTTGCACTTGAAAC+TGG + Chr6:28837899-28837918 MsG0680031876.01.T01:intron 40.0%
!!! GGGCTTTTGGAATTGTATCA+TGG + Chr6:28845906-28845925 MsG0680031876.01.T01:CDS 40.0%
!!! GTTGATGATGACATTTTCGG+TGG - Chr6:28838361-28838380 None:intergenic 40.0%
!!! TTTTGGGATGGGTGACTTTA+TGG + Chr6:28836221-28836240 MsG0680031876.01.T01:intron 40.0%
!!! TTTTGGTTTCCTAGCACTAG+AGG - Chr6:28844601-28844620 None:intergenic 40.0%
AACATATCATTGGAGCCAGG+TGG + Chr6:28836996-28837015 MsG0680031876.01.T01:CDS 45.0%
AAGATAGATGGGAACCCTGA+AGG - Chr6:28843612-28843631 None:intergenic 45.0%
AATGAAGTTTGGCCGCTTCA+CGG + Chr6:28842104-28842123 MsG0680031876.01.T01:intron 45.0%
ACGGTTATGACTGTTAGAGG+TGG - Chr6:28837845-28837864 None:intergenic 45.0%
ACTGAAGCATGTTGCTGAAG+AGG + Chr6:28844853-28844872 MsG0680031876.01.T01:CDS 45.0%
ACTGACAACTGGATTCTCTC+TGG + Chr6:28844786-28844805 MsG0680031876.01.T01:intron 45.0%
ACTGTACTGGAATGACCTTC+AGG + Chr6:28843594-28843613 MsG0680031876.01.T01:CDS 45.0%
ACTGTTGGATCTTGTGTTGG+GGG - Chr6:28843182-28843201 None:intergenic 45.0%
AGGTGATCGTGTTAGCATCA+CGG - Chr6:28839121-28839140 None:intergenic 45.0%
AGTATGCTTTCATGTAGGGG+CGG - Chr6:28845303-28845322 None:intergenic 45.0%
ATAGGTTTCCAGCCAAAGTC+TGG + Chr6:28837571-28837590 MsG0680031876.01.T01:CDS 45.0%
ATGATGAGTGCAGAGTCAAG+AGG - Chr6:28838807-28838826 None:intergenic 45.0%
CAAAACCAGCTTGTATGGTG+AGG - Chr6:28838699-28838718 None:intergenic 45.0%
CTGGTATCCATGACTGGAAT+AGG + Chr6:28838239-28838258 MsG0680031876.01.T01:intron 45.0%
CTGTACTGGAATGACCTTCA+GGG + Chr6:28843595-28843614 MsG0680031876.01.T01:CDS 45.0%
CTTGGCATTTGGGCATTAGT+TGG + Chr6:28840047-28840066 MsG0680031876.01.T01:intron 45.0%
GAAGTAGCCTATTCCAGTCA+TGG - Chr6:28838249-28838268 None:intergenic 45.0%
GACTTGATGCTACTCAAGTG+TGG - Chr6:28841890-28841909 None:intergenic 45.0%
GATCTTCTGGTATCCATGAC+TGG + Chr6:28838233-28838252 MsG0680031876.01.T01:intron 45.0%
GCATCAAGTCTTGGGTTCAA+TGG + Chr6:28841900-28841919 MsG0680031876.01.T01:intron 45.0%
GGAAAGCTACCTTGTATTCC+CGG + Chr6:28843765-28843784 MsG0680031876.01.T01:CDS 45.0%
GGCCGCTAACATATACCATA+GGG - Chr6:28838604-28838623 None:intergenic 45.0%
GGGTTGCCATACTAACCTTT+AGG - Chr6:28840341-28840360 None:intergenic 45.0%
GGTAATTCACCGGGAATACA+AGG - Chr6:28843777-28843796 None:intergenic 45.0%
GGTGGTCAGTTAGAACTTAG+TGG + Chr6:28837014-28837033 MsG0680031876.01.T01:CDS 45.0%
GTATGAGACTGCATGGTTGA+AGG + Chr6:28836090-28836109 MsG0680031876.01.T01:intron 45.0%
GTGACGGTTATGACTGTTAG+AGG - Chr6:28837848-28837867 None:intergenic 45.0%
TAGCAATGTAGTGCGCACTT+AGG - Chr6:28844541-28844560 None:intergenic 45.0%
TATAGCCACACTCAGCCATA+CGG + Chr6:28845272-28845291 MsG0680031876.01.T01:intron 45.0%
TCATCCATGACTACGGTGAA+CGG + Chr6:28840613-28840632 MsG0680031876.01.T01:intron 45.0%
TCGCGAGATACCATTACTGA+AGG + Chr6:28842338-28842357 MsG0680031876.01.T01:intron 45.0%
TCTGATGCAGGGTTTCAACA+GGG - Chr6:28837043-28837062 None:intergenic 45.0%
TGATTCAAGGTCATCCAGTG+TGG - Chr6:28838147-28838166 None:intergenic 45.0%
TGGCCGCTAACATATACCAT+AGG - Chr6:28838605-28838624 None:intergenic 45.0%
TGGTTGTGCAATACACGTCA+AGG + Chr6:28840235-28840254 MsG0680031876.01.T01:intron 45.0%
TTTACCGTTCACCGTAGTCA+TGG - Chr6:28840620-28840639 None:intergenic 45.0%
! CTAAGTTCTAACTGACCACC+TGG - Chr6:28837014-28837033 None:intergenic 45.0%
! GACTAAATCCCACCGAGTTT+TGG - Chr6:28838625-28838644 None:intergenic 45.0%
! GCTCGGTACTGAATTAAGCA+AGG - Chr6:28843701-28843720 None:intergenic 45.0%
! GCTTAGGCTTTGATCTTCTG+TGG - Chr6:28837808-28837827 None:intergenic 45.0%
! GTCCAAGTACTTTTACCCCT+TGG - Chr6:28841975-28841994 None:intergenic 45.0%
! TGAAAATGGTGGGGGATTGT+TGG + Chr6:28842395-28842414 MsG0680031876.01.T01:intron 45.0%
! TTCTGAGGAGTGAAACCCTA+TGG + Chr6:28838586-28838605 MsG0680031876.01.T01:intron 45.0%
! TTTGCTGTAGGACTTCTTGG+CGG + Chr6:28843743-28843762 MsG0680031876.01.T01:intron 45.0%
!! CCGTAAAAGCCGGTTTTGTA+AGG + Chr6:28837354-28837373 MsG0680031876.01.T01:intron 45.0%
!! GTTCTGAAGCTGACATGATC+CGG + Chr6:28839512-28839531 MsG0680031876.01.T01:CDS 45.0%
!! TCCCAAGGGGTAAAAGTACT+TGG + Chr6:28841970-28841989 MsG0680031876.01.T01:intron 45.0%
!! TCTCGTGCAGTTGTTTCTGT+TGG + Chr6:28839732-28839751 MsG0680031876.01.T01:intron 45.0%
!! TTACCGGCATTTTGGGTAAG+TGG + Chr6:28844018-28844037 MsG0680031876.01.T01:intron 45.0%
!! AAATATAATCAATAAAAAAA+AGG - Chr6:28836367-28836386 None:intergenic 5.0%
!!! TATTTTTTTTAATCTATATA+TGG + Chr6:28839181-28839200 MsG0680031876.01.T01:intron 5.0%
!!! TTTTATTTATATGATTTATA+TGG + Chr6:28845122-28845141 MsG0680031876.01.T01:intron 5.0%
AACCCTTGAACTCCGTGAAG+CGG - Chr6:28842119-28842138 None:intergenic 50.0%
AAGCCCACGAGAACCAACTT+TGG - Chr6:28839324-28839343 None:intergenic 50.0%
AATGGATCCTGAAGTCGTGC+AGG + Chr6:28836068-28836087 MsG0680031876.01.T01:CDS 50.0%
AATTCCAAAAGCCCCTCAGC+TGG - Chr6:28845900-28845919 None:intergenic 50.0%
ACAACTGGATTCTCTCTGGC+AGG + Chr6:28844790-28844809 MsG0680031876.01.T01:intron 50.0%
ACCTAGAAGCTGCCAAAAGC+CGG - Chr6:28836025-28836044 None:intergenic 50.0%
AGCCCACGAGAACCAACTTT+GGG - Chr6:28839323-28839342 None:intergenic 50.0%
ATGGCACTCGAGGCTAATGA+GGG + Chr6:28835988-28836007 MsG0680031876.01.T01:CDS 50.0%
CAAGGCTAGCACGAAACTTC+CGG - Chr6:28839534-28839553 None:intergenic 50.0%
CACGCTGAAAAGACTCGTGT+TGG + Chr6:28836278-28836297 MsG0680031876.01.T01:intron 50.0%
CTGATGCAGGGTTTCAACAG+GGG - Chr6:28837042-28837061 None:intergenic 50.0%
CTTTGAGTCCAGACTTTGGC+TGG - Chr6:28837582-28837601 None:intergenic 50.0%
GAGGTGGCAAGAACAGGTAA+TGG + Chr6:28845481-28845500 MsG0680031876.01.T01:intron 50.0%
GGTCAACAACCTCTAGTGCT+AGG + Chr6:28844589-28844608 MsG0680031876.01.T01:intron 50.0%
GGTGGGATTTAGTCCCACAT+CGG + Chr6:28838631-28838650 MsG0680031876.01.T01:intron 50.0%
GTCTGATGCAGGGTTTCAAC+AGG - Chr6:28837044-28837063 None:intergenic 50.0%
GTTGCGCCACTAATCCTTTC+TGG + Chr6:28844477-28844496 MsG0680031876.01.T01:intron 50.0%
TAGCGGTAAGAGTTGAACCG+AGG + Chr6:28845151-28845170 MsG0680031876.01.T01:intron 50.0%
TCTCATACCTGCACGACTTC+AGG - Chr6:28836078-28836097 None:intergenic 50.0%
TTGCTGTAGGACTTCTTGGC+GGG + Chr6:28843744-28843763 MsG0680031876.01.T01:intron 50.0%
! ATGCCCAAAGTTGGTTCTCG+TGG + Chr6:28839317-28839336 MsG0680031876.01.T01:CDS 50.0%
! GAAAGCATACTACAGAGCGC+TGG + Chr6:28845312-28845331 MsG0680031876.01.T01:intron 50.0%
! GATGTTGATAAGGACCGCAC+AGG + Chr6:28843274-28843293 MsG0680031876.01.T01:CDS 50.0%
! GTGGGTTGAGTTTCCACCAT+TGG - Chr6:28841871-28841890 None:intergenic 50.0%
! GTTAGGAGATACGCTTGGTG+TGG + Chr6:28840215-28840234 MsG0680031876.01.T01:intron 50.0%
! TGCCCAAAGTTGGTTCTCGT+GGG + Chr6:28839318-28839337 MsG0680031876.01.T01:CDS 50.0%
! TTCTTACGGGCTGCAATGCA+AGG - Chr6:28839552-28839571 None:intergenic 50.0%
!! CAAAACCGGCTTTTACGGTG+AGG - Chr6:28837352-28837371 None:intergenic 50.0%
!! CTCACTGGTTCAGCTTGCAT+TGG - Chr6:28838775-28838794 None:intergenic 50.0%
!! TTGGAGATGAGAGGTGCTGA+CGG + Chr6:28843970-28843989 MsG0680031876.01.T01:CDS 50.0%
AAGGGTTGTGTCGTCTGCTG+CGG + Chr6:28843420-28843439 MsG0680031876.01.T01:intron 55.0%
ACCTACCGTATGGCTGAGTG+TGG - Chr6:28845280-28845299 None:intergenic 55.0%
ACTCGAGGCTAATGAGGGTG+GGG + Chr6:28835993-28836012 MsG0680031876.01.T01:CDS 55.0%
CAAAAGGCAGCATGCCTGTG+CGG - Chr6:28843291-28843310 None:intergenic 55.0%
CACCTGTACAGTGCATGTCC+TGG - Chr6:28839357-28839376 None:intergenic 55.0%
CACTCGAGGCTAATGAGGGT+GGG + Chr6:28835992-28836011 MsG0680031876.01.T01:CDS 55.0%
CCGCCACTTACCCAAAATGC+CGG - Chr6:28844024-28844043 None:intergenic 55.0%
CGTGCAGGTATGAGACTGCA+TGG + Chr6:28836083-28836102 MsG0680031876.01.T01:intron 55.0%
CTCTGGCAGGCTACCAAAAC+TGG + Chr6:28844803-28844822 MsG0680031876.01.T01:intron 55.0%
GCACTCCTCACCATACAAGC+TGG + Chr6:28838691-28838710 MsG0680031876.01.T01:intron 55.0%
GCACTCCTCACCGTAAAAGC+CGG + Chr6:28837344-28837363 MsG0680031876.01.T01:intron 55.0%
GTAGCTGAGGTGGCAAGAAC+AGG + Chr6:28845475-28845494 MsG0680031876.01.T01:CDS 55.0%
GTATCCTGAAGGGGATTCGC+CGG + Chr6:28840266-28840285 MsG0680031876.01.T01:intron 55.0%
GTCCAGGACATGCACTGTAC+AGG + Chr6:28839352-28839371 MsG0680031876.01.T01:CDS 55.0%
GTTAGCGGCCAAAACTCGGT+GGG + Chr6:28838614-28838633 MsG0680031876.01.T01:intron 55.0%
TGGGGGCGAATCGAACCTAA+AGG + Chr6:28840323-28840342 MsG0680031876.01.T01:intron 55.0%
TGTTAGCGGCCAAAACTCGG+TGG + Chr6:28838613-28838632 MsG0680031876.01.T01:intron 55.0%
! CTCCTCACTCGCACGCTTTT+CGG - Chr6:28836254-28836273 None:intergenic 55.0%
! TCCGGCTTTTGGCAGCTTCT+AGG + Chr6:28836021-28836040 MsG0680031876.01.T01:CDS 55.0%
! TCCTCACTCGCACGCTTTTC+GGG - Chr6:28836253-28836272 None:intergenic 55.0%
!! AGATGAGAGGTGCTGACGGA+GGG + Chr6:28843974-28843993 MsG0680031876.01.T01:CDS 55.0%
!! CCGGCATTTTGGGTAAGTGG+CGG + Chr6:28844021-28844040 MsG0680031876.01.T01:intron 55.0%
!! GTAGGTGTCACTCCAGCTGA+GGG + Chr6:28845885-28845904 MsG0680031876.01.T01:intron 55.0%
!! TAGGTGTCACTCCAGCTGAG+GGG + Chr6:28845886-28845905 MsG0680031876.01.T01:intron 55.0%
AATGAGGGTGGGGAGTGGTC+CGG + Chr6:28836003-28836022 MsG0680031876.01.T01:CDS 60.0%
AGGCTAATGAGGGTGGGGAG+TGG + Chr6:28835998-28836017 MsG0680031876.01.T01:CDS 60.0%
ATGACCGGCGAATCCCCTTC+AGG - Chr6:28840273-28840292 None:intergenic 60.0%
GCACTCGAGGCTAATGAGGG+TGG + Chr6:28835991-28836010 MsG0680031876.01.T01:CDS 60.0%
GCCACACTCAGCCATACGGT+AGG + Chr6:28845276-28845295 MsG0680031876.01.T01:intron 60.0%
GGCCGCTTCACGGAGTTCAA+GGG + Chr6:28842114-28842133 MsG0680031876.01.T01:intron 60.0%
GTGGGCTTGACGTGATGTCC+AGG + Chr6:28839336-28839355 MsG0680031876.01.T01:CDS 60.0%
TGGCCGCTTCACGGAGTTCA+AGG + Chr6:28842113-28842132 MsG0680031876.01.T01:intron 60.0%
! CACTCCAGCTGAGGGGCTTT+TGG + Chr6:28845893-28845912 MsG0680031876.01.T01:CDS 60.0%
! GAGTGGTGGGAGAGTCAGAG+TGG - Chr6:28839070-28839089 None:intergenic 60.0%
! TCCCGAAAAGCGTGCGAGTG+AGG + Chr6:28836249-28836268 MsG0680031876.01.T01:intron 60.0%
!! GAGATGAGAGGTGCTGACGG+AGG + Chr6:28843973-28843992 MsG0680031876.01.T01:CDS 60.0%
!! GGTAGGTGTCACTCCAGCTG+AGG + Chr6:28845884-28845903 MsG0680031876.01.T01:intron 60.0%
GTAGGGGCGGACCTACCGTA+TGG - Chr6:28845290-28845309 None:intergenic 65.0%
! GTGGGGAGTGGTCCGGCTTT+TGG + Chr6:28836010-28836029 MsG0680031876.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr6 gene 28835988 28846178 28835988 ID=MsG0680031876.01;Name=MsG0680031876.01
Chr6 mRNA 28835988 28846178 28835988 ID=MsG0680031876.01.T01;Parent=MsG0680031876.01;Name=MsG0680031876.01.T01;_AED=0.46;_eAED=0.50;_QI=0|0.85|0.8|1|0.85|0.86|15|201|463
Chr6 exon 28835988 28836089 28835988 ID=MsG0680031876.01.T01:exon:14745;Parent=MsG0680031876.01.T01
Chr6 exon 28836702 28836878 28836702 ID=MsG0680031876.01.T01:exon:14746;Parent=MsG0680031876.01.T01
Chr6 exon 28836987 28837094 28836987 ID=MsG0680031876.01.T01:exon:14747;Parent=MsG0680031876.01.T01
Chr6 exon 28837529 28837621 28837529 ID=MsG0680031876.01.T01:exon:14748;Parent=MsG0680031876.01.T01
Chr6 exon 28839290 28839373 28839290 ID=MsG0680031876.01.T01:exon:14749;Parent=MsG0680031876.01.T01
Chr6 exon 28839496 28839564 28839496 ID=MsG0680031876.01.T01:exon:14750;Parent=MsG0680031876.01.T01
Chr6 exon 28839649 28839740 28839649 ID=MsG0680031876.01.T01:exon:14751;Parent=MsG0680031876.01.T01
Chr6 exon 28843261 28843329 28843261 ID=MsG0680031876.01.T01:exon:14752;Parent=MsG0680031876.01.T01
Chr6 exon 28843523 28843616 28843523 ID=MsG0680031876.01.T01:exon:14753;Parent=MsG0680031876.01.T01
Chr6 exon 28843753 28843842 28843753 ID=MsG0680031876.01.T01:exon:14754;Parent=MsG0680031876.01.T01
Chr6 exon 28843952 28844032 28843952 ID=MsG0680031876.01.T01:exon:14755;Parent=MsG0680031876.01.T01
Chr6 exon 28844261 28844353 28844261 ID=MsG0680031876.01.T01:exon:14756;Parent=MsG0680031876.01.T01
Chr6 exon 28844812 28844892 28844812 ID=MsG0680031876.01.T01:exon:14757;Parent=MsG0680031876.01.T01
Chr6 exon 28845427 28845496 28845427 ID=MsG0680031876.01.T01:exon:14758;Parent=MsG0680031876.01.T01
Chr6 exon 28845889 28846178 28845889 ID=MsG0680031876.01.T01:exon:14759;Parent=MsG0680031876.01.T01
Chr6 CDS 28835988 28836089 28835988 ID=MsG0680031876.01.T01:cds;Parent=MsG0680031876.01.T01
Chr6 CDS 28836702 28836878 28836702 ID=MsG0680031876.01.T01:cds;Parent=MsG0680031876.01.T01
Chr6 CDS 28836987 28837094 28836987 ID=MsG0680031876.01.T01:cds;Parent=MsG0680031876.01.T01
Chr6 CDS 28837529 28837621 28837529 ID=MsG0680031876.01.T01:cds;Parent=MsG0680031876.01.T01
Chr6 CDS 28839290 28839373 28839290 ID=MsG0680031876.01.T01:cds;Parent=MsG0680031876.01.T01
Chr6 CDS 28839496 28839564 28839496 ID=MsG0680031876.01.T01:cds;Parent=MsG0680031876.01.T01
Chr6 CDS 28839649 28839740 28839649 ID=MsG0680031876.01.T01:cds;Parent=MsG0680031876.01.T01
Chr6 CDS 28843261 28843329 28843261 ID=MsG0680031876.01.T01:cds;Parent=MsG0680031876.01.T01
Chr6 CDS 28843523 28843616 28843523 ID=MsG0680031876.01.T01:cds;Parent=MsG0680031876.01.T01
Chr6 CDS 28843753 28843842 28843753 ID=MsG0680031876.01.T01:cds;Parent=MsG0680031876.01.T01
Chr6 CDS 28843952 28844032 28843952 ID=MsG0680031876.01.T01:cds;Parent=MsG0680031876.01.T01
Chr6 CDS 28844261 28844353 28844261 ID=MsG0680031876.01.T01:cds;Parent=MsG0680031876.01.T01
Chr6 CDS 28844812 28844892 28844812 ID=MsG0680031876.01.T01:cds;Parent=MsG0680031876.01.T01
Chr6 CDS 28845427 28845496 28845427 ID=MsG0680031876.01.T01:cds;Parent=MsG0680031876.01.T01
Chr6 CDS 28845889 28845977 28845889 ID=MsG0680031876.01.T01:cds;Parent=MsG0680031876.01.T01
Chr6 three_prime_UTR 28845978 28846178 28845978 ID=MsG0680031876.01.T01:three_prime_utr;Parent=MsG0680031876.01.T01
Gene Sequence

>MsG0680031876.01.T01

ATGGCACTCGAGGCTAATGAGGGTGGGGAGTGGTCCGGCTTTTGGCAGCTTCTAGGTAAAACCGAATCACATCAGAATGAAATGGATCCTGAAGTCGTGCAGGTTAAATTCTTCATGTCCTCTTGCAGAATAGGTACTGAACATGAAAAGTTTGGTTTTGAGTTTAAAAACTTGCAACCTATTAAGTATGAGCAAATAGCAGAATTGCTAAATGGCATTGCTGAGAGATTTTTCTGGGATAAAGTAATGGAAGGTGATAAAATTATTGGACTCAAACAAGGCAAGCAAAACATATCATTGGAGCCAGGTGGTCAGTTAGAACTTAGTGGAGCCCCTGTTGAAACCCTGCATCAGACTTATGAAGAAATTTATTTGCACCTCTATCAAGTTAAAGCTGTTGCTGAGAAAATGGGAATTGGATTTTTGGGGATAGGTTTCCAGCCAAAGTCTGGACTCAAAGACATGCCTATGATACCAAAGGAAAGAAATGACATTATGAACAAATACATGCCCAAAGTTGGTTCTCGTGGGCTTGACGTGATGTCCAGGACATGCACTGTACAGGTCAATCTGGACTATAGTTCTGAAGCTGACATGATCCGGAAGTTTCGTGCTAGCCTTGCATTGCAGCCCATAGCAACAGCTCTTTTTGCAAATTCACCCTTCACAAATGGAAAGCCCAATGGGTTTGTCATTATGAGAAGGTACATGAAAGTTCTCGTGCATCATATTTGGACTGATGTTGATAAGGACCGCACAGGCATGCTGCCTTTTGTTTTCGATGATTCTTTCGGGTTTGAGAAGTATGTTGATTATGCTCTTGATGTTCCAATGTGTTTTGTCTATCGGAAAAAGAAACACATCGACTGTACTGGAATGACCTTCAGGGACTTCTTGGCGGGAAAGCTACCTTGTATTCCCGGTGAATTACCATCTCTTAATGATTGGGAGAATCATTTGGGCACTATATTTCCTGAGGTCAGGCTAAAGAGATATTTGGAGATGAGAGGTGCTGACGGAGGGCCAATGATAAGTTTATGTGCTTTACCGGCATTTTGGGTAGGGTTATTATATGATGAGATTTCTTTGCAAAGTGTATTAGATTTGACAGCAGATTGGACTACAGAAGAAAGACAAATGCTGAGGAATAAGGCTACCAAAACTGGTCTAAAGACACCATTTCGAGATGGTTTACTGAAGCATGTTGCTGAAGAGGTTCTAAAGTTGGCAAAGGATGGCTTGGAAAGAAGATGCTTTAACGAATCAAGATTTTTGAATGTAGTAGCTGAGGTGGCAAGAACAGGTGTCACTCCAGCTGAGGGGCTTTTGGAATTGTATCATGGAAAGTGGAAGCAATCTATTGATCATGTATATGAGGAATTGCTTTATTAA
Protein sequence

>MsG0680031876.01.T01

MALEANEGGEWSGFWQLLGKTESHQNEMDPEVVQVKFFMSSCRIGTEHEKFGFEFKNLQPIKYEQIAELLNGIAERFFWDKVMEGDKIIGLKQGKQNISLEPGGQLELSGAPVETLHQTYEEIYLHLYQVKAVAEKMGIGFLGIGFQPKSGLKDMPMIPKERNDIMNKYMPKVGSRGLDVMSRTCTVQVNLDYSSEADMIRKFRASLALQPIATALFANSPFTNGKPNGFVIMRRYMKVLVHHIWTDVDKDRTGMLPFVFDDSFGFEKYVDYALDVPMCFVYRKKKHIDCTGMTFRDFLAGKLPCIPGELPSLNDWENHLGTIFPEVRLKRYLEMRGADGGPMISLCALPAFWVGLLYDEISLQSVLDLTADWTTEERQMLRNKATKTGLKTPFRDGLLKHVAEEVLKLAKDGLERRCFNESRFLNVVAEVARTGVTPAEGLLELYHGKWKQSIDHVYEELLY*