Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680032421.01.T01 | XP_024641192.1 | 76.359 | 423 | 24 | 3 | 1 | 347 | 1 | 423 | 0 | 622 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680032421.01.T01 | D4Q9Z5 | 54.93 | 426 | 113 | 6 | 1 | 347 | 1 | 426 | 2.33E-148 | 429 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680032421.01.T01 | A0A396HD80 | 76.359 | 423 | 24 | 3 | 1 | 347 | 1 | 423 | 0.0 | 622 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0680032421.01 | MsG0680032422.01 | 0.878277 | 3.199507e-69 | 1.660493e-65 |
| MsG0480022581.01 | MsG0680032421.01 | 0.800831 | 1.198296e-48 | 5.635549e-46 |
| MsG0480018096.01 | MsG0680032421.01 | 0.831968 | 1.235507e-55 | 1.362020e-52 |
| MsG0280007902.01 | MsG0680032421.01 | 0.860159 | 2.507846e-63 | 6.790762e-60 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680032421.01.T01 | MTR_6g042310 | 76.359 | 423 | 24 | 3 | 1 | 347 | 1 | 423 | 0.0 | 617 |
| MsG0680032421.01.T01 | MTR_4g123553 | 59.615 | 416 | 92 | 4 | 7 | 347 | 6 | 420 | 4.19e-172 | 487 |
| MsG0680032421.01.T01 | MTR_2g046620 | 59.145 | 421 | 98 | 2 | 1 | 347 | 1 | 421 | 2.44e-171 | 485 |
| MsG0680032421.01.T01 | MTR_4g077960 | 61.209 | 397 | 80 | 2 | 25 | 347 | 1 | 397 | 1.03e-164 | 467 |
| MsG0680032421.01.T01 | MTR_2g008220 | 57.377 | 427 | 99 | 7 | 1 | 347 | 1 | 424 | 1.86e-158 | 452 |
| MsG0680032421.01.T01 | MTR_2g008225 | 56.206 | 427 | 105 | 7 | 1 | 347 | 1 | 425 | 3.07e-155 | 444 |
| MsG0680032421.01.T01 | MTR_6g036650 | 56.148 | 431 | 104 | 7 | 1 | 347 | 1 | 430 | 1.82e-152 | 437 |
| MsG0680032421.01.T01 | MTR_3g435310 | 49.882 | 423 | 92 | 6 | 1 | 347 | 1 | 379 | 5.34e-123 | 360 |
| MsG0680032421.01.T01 | MTR_2g008226 | 42.558 | 430 | 155 | 8 | 8 | 347 | 2 | 429 | 1.29e-107 | 323 |
| MsG0680032421.01.T01 | MTR_8g068360 | 33.412 | 425 | 186 | 8 | 13 | 347 | 9 | 426 | 6.41e-75 | 239 |
| MsG0680032421.01.T01 | MTR_8g068340 | 33.647 | 425 | 186 | 9 | 13 | 347 | 9 | 427 | 5.14e-74 | 236 |
| MsG0680032421.01.T01 | MTR_8g068330 | 34.507 | 426 | 181 | 12 | 13 | 347 | 5 | 423 | 5.47e-72 | 231 |
| MsG0680032421.01.T01 | MTR_7g067330 | 31.884 | 414 | 172 | 11 | 13 | 347 | 6 | 388 | 1.42e-60 | 201 |
| MsG0680032421.01.T01 | MTR_8g007565 | 30.404 | 421 | 201 | 10 | 14 | 345 | 5 | 422 | 3.71e-56 | 190 |
| MsG0680032421.01.T01 | MTR_8g007650 | 30.166 | 421 | 202 | 10 | 14 | 345 | 5 | 422 | 2.83e-55 | 187 |
| MsG0680032421.01.T01 | MTR_7g067120 | 31.387 | 411 | 184 | 11 | 10 | 347 | 3 | 388 | 3.30e-55 | 186 |
| MsG0680032421.01.T01 | MTR_5g066410 | 29.567 | 416 | 186 | 14 | 19 | 345 | 1 | 398 | 7.23e-43 | 154 |
| MsG0680032421.01.T01 | MTR_4g079250 | 29.858 | 422 | 194 | 16 | 15 | 347 | 7 | 415 | 4.61e-41 | 149 |
| MsG0680032421.01.T01 | MTR_4g079270 | 29.117 | 419 | 201 | 16 | 15 | 347 | 7 | 415 | 1.94e-40 | 148 |
| MsG0680032421.01.T01 | MTR_1g090270 | 26.744 | 430 | 208 | 12 | 9 | 347 | 8 | 421 | 2.00e-36 | 137 |
| MsG0680032421.01.T01 | MTR_2g014900 | 25.952 | 420 | 212 | 12 | 15 | 347 | 6 | 413 | 9.77e-36 | 135 |
| MsG0680032421.01.T01 | MTR_2g083380 | 27.934 | 426 | 207 | 12 | 10 | 347 | 19 | 432 | 2.77e-29 | 117 |
| MsG0680032421.01.T01 | MTR_2g083480 | 26.824 | 425 | 203 | 14 | 15 | 347 | 7 | 415 | 9.79e-28 | 113 |
| MsG0680032421.01.T01 | MTR_2g083490 | 27.465 | 426 | 209 | 14 | 10 | 347 | 2 | 415 | 1.87e-26 | 109 |
| MsG0680032421.01.T01 | MTR_2g083430 | 25.416 | 421 | 214 | 12 | 15 | 347 | 7 | 415 | 1.07e-25 | 107 |
| MsG0680032421.01.T01 | MTR_2g083420 | 23.753 | 421 | 197 | 15 | 15 | 347 | 7 | 391 | 1.10e-21 | 95.9 |
| MsG0680032421.01.T01 | MTR_8g009055 | 28.371 | 356 | 193 | 15 | 13 | 314 | 3 | 350 | 7.90e-21 | 93.6 |
| MsG0680032421.01.T01 | MTR_6g023665 | 28.108 | 370 | 189 | 19 | 3 | 314 | 4 | 354 | 1.20e-19 | 90.1 |
| MsG0680032421.01.T01 | MTR_4g059370 | 33.019 | 212 | 117 | 8 | 127 | 329 | 91 | 286 | 2.03e-19 | 89.0 |
| MsG0680032421.01.T01 | MTR_6g488280 | 26.997 | 363 | 192 | 17 | 8 | 314 | 2 | 347 | 2.52e-19 | 89.0 |
| MsG0680032421.01.T01 | MTR_0428s0010 | 26.997 | 363 | 192 | 17 | 8 | 314 | 2 | 347 | 2.52e-19 | 89.0 |
| MsG0680032421.01.T01 | MTR_4g485630 | 26.685 | 371 | 202 | 17 | 9 | 323 | 3 | 359 | 4.34e-19 | 88.6 |
| MsG0680032421.01.T01 | MTR_7g046490 | 29.973 | 367 | 181 | 18 | 16 | 323 | 6 | 355 | 4.92e-19 | 88.2 |
| MsG0680032421.01.T01 | MTR_8g009073 | 26.966 | 356 | 196 | 14 | 13 | 314 | 3 | 348 | 6.75e-19 | 87.8 |
| MsG0680032421.01.T01 | MTR_8g006730 | 28.532 | 361 | 185 | 18 | 13 | 314 | 3 | 349 | 7.37e-19 | 87.8 |
| MsG0680032421.01.T01 | MTR_7g047030 | 27.793 | 367 | 197 | 15 | 13 | 323 | 3 | 357 | 9.95e-19 | 87.4 |
| MsG0680032421.01.T01 | MTR_7g047270 | 27.793 | 367 | 197 | 15 | 13 | 323 | 3 | 357 | 9.95e-19 | 87.4 |
| MsG0680032421.01.T01 | MTR_0078s0010 | 27.322 | 366 | 200 | 14 | 13 | 323 | 3 | 357 | 2.35e-18 | 86.3 |
| MsG0680032421.01.T01 | MTR_8g009063 | 26.184 | 359 | 197 | 16 | 13 | 314 | 10 | 357 | 5.10e-18 | 85.1 |
| MsG0680032421.01.T01 | MTR_1g107350 | 27.273 | 374 | 187 | 16 | 15 | 324 | 7 | 359 | 6.03e-18 | 85.1 |
| MsG0680032421.01.T01 | MTR_3g008010 | 26.870 | 361 | 197 | 15 | 16 | 314 | 10 | 365 | 6.99e-18 | 84.7 |
| MsG0680032421.01.T01 | MTR_5g087620 | 24.538 | 379 | 209 | 16 | 16 | 324 | 10 | 381 | 9.77e-18 | 84.3 |
| MsG0680032421.01.T01 | MTR_8g066610 | 22.872 | 376 | 216 | 14 | 15 | 329 | 8 | 370 | 1.48e-17 | 84.0 |
| MsG0680032421.01.T01 | MTR_1g107375 | 27.072 | 362 | 192 | 15 | 14 | 324 | 6 | 346 | 2.67e-17 | 83.2 |
| MsG0680032421.01.T01 | MTR_8g009050 | 26.287 | 369 | 201 | 18 | 13 | 323 | 3 | 358 | 3.68e-17 | 82.8 |
| MsG0680032421.01.T01 | MTR_0078s0060 | 26.902 | 368 | 198 | 14 | 13 | 323 | 3 | 356 | 4.40e-17 | 82.4 |
| MsG0680032421.01.T01 | MTR_2g034990 | 24.176 | 364 | 194 | 10 | 15 | 314 | 10 | 355 | 5.96e-17 | 82.0 |
| MsG0680032421.01.T01 | MTR_8g071070 | 27.642 | 369 | 193 | 17 | 16 | 323 | 7 | 362 | 1.02e-16 | 81.3 |
| MsG0680032421.01.T01 | MTR_7g102460 | 24.044 | 366 | 195 | 15 | 15 | 313 | 8 | 357 | 1.42e-16 | 80.9 |
| MsG0680032421.01.T01 | MTR_1g019510 | 25.479 | 365 | 193 | 16 | 13 | 316 | 3 | 349 | 1.54e-16 | 80.9 |
| MsG0680032421.01.T01 | MTR_7g102550 | 26.649 | 379 | 191 | 17 | 1 | 314 | 1 | 357 | 1.62e-16 | 80.9 |
| MsG0680032421.01.T01 | MTR_3g049970 | 27.500 | 360 | 204 | 13 | 15 | 324 | 8 | 360 | 1.75e-16 | 80.5 |
| MsG0680032421.01.T01 | MTR_7g117170 | 27.887 | 355 | 182 | 16 | 17 | 311 | 16 | 356 | 2.39e-16 | 80.1 |
| MsG0680032421.01.T01 | MTR_1g029540 | 29.605 | 152 | 88 | 4 | 176 | 314 | 196 | 341 | 4.15e-16 | 79.3 |
| MsG0680032421.01.T01 | MTR_8g465670 | 27.049 | 366 | 189 | 19 | 8 | 314 | 3 | 349 | 5.32e-16 | 79.3 |
| MsG0680032421.01.T01 | MTR_8g006220 | 26.720 | 378 | 183 | 20 | 8 | 314 | 2 | 356 | 8.74e-16 | 78.6 |
| MsG0680032421.01.T01 | MTR_6g033625 | 23.851 | 348 | 205 | 10 | 17 | 311 | 5 | 345 | 1.02e-15 | 78.2 |
| MsG0680032421.01.T01 | MTR_8g009067 | 26.287 | 369 | 199 | 16 | 13 | 323 | 3 | 356 | 1.77e-15 | 77.8 |
| MsG0680032421.01.T01 | MTR_5g464810 | 26.111 | 360 | 193 | 14 | 16 | 311 | 12 | 362 | 1.86e-15 | 77.4 |
| MsG0680032421.01.T01 | MTR_5g064240 | 26.111 | 360 | 193 | 14 | 16 | 311 | 12 | 362 | 1.86e-15 | 77.4 |
| MsG0680032421.01.T01 | MTR_8g008990 | 27.273 | 363 | 190 | 20 | 13 | 314 | 3 | 352 | 2.02e-15 | 77.4 |
| MsG0680032421.01.T01 | MTR_8g006710 | 25.575 | 348 | 203 | 14 | 17 | 314 | 7 | 348 | 2.32e-15 | 77.4 |
| MsG0680032421.01.T01 | MTR_0036s0220 | 26.211 | 351 | 193 | 15 | 16 | 305 | 12 | 357 | 2.68e-15 | 77.0 |
| MsG0680032421.01.T01 | MTR_1g107315 | 26.111 | 360 | 207 | 11 | 16 | 324 | 8 | 359 | 2.77e-15 | 77.0 |
| MsG0680032421.01.T01 | MTR_1g032490 | 25.634 | 355 | 206 | 13 | 8 | 311 | 2 | 349 | 3.10e-15 | 77.0 |
| MsG0680032421.01.T01 | MTR_3g009510 | 25.205 | 365 | 205 | 12 | 17 | 319 | 6 | 364 | 3.24e-15 | 77.0 |
| MsG0680032421.01.T01 | MTR_8g008970 | 25.568 | 352 | 206 | 14 | 13 | 314 | 3 | 348 | 7.72e-15 | 76.3 |
| MsG0680032421.01.T01 | MTR_6g033615 | 23.714 | 350 | 189 | 12 | 17 | 311 | 5 | 331 | 9.25e-15 | 75.5 |
| MsG0680032421.01.T01 | MTR_5g035560 | 25.208 | 361 | 188 | 15 | 8 | 314 | 3 | 335 | 1.01e-14 | 75.5 |
| MsG0680032421.01.T01 | MTR_8g006270 | 26.950 | 282 | 155 | 13 | 75 | 323 | 92 | 355 | 2.65e-14 | 73.9 |
| MsG0680032421.01.T01 | MTR_6g038230 | 26.816 | 358 | 202 | 13 | 16 | 329 | 11 | 352 | 2.81e-14 | 73.9 |
| MsG0680032421.01.T01 | MTR_4g008630 | 38.372 | 86 | 44 | 1 | 238 | 314 | 259 | 344 | 4.51e-14 | 73.2 |
| MsG0680032421.01.T01 | MTR_8g064870 | 26.796 | 362 | 210 | 13 | 15 | 326 | 10 | 366 | 8.19e-14 | 72.8 |
| MsG0680032421.01.T01 | MTR_6g038240 | 25.000 | 344 | 207 | 11 | 16 | 319 | 11 | 343 | 8.71e-14 | 72.4 |
| MsG0680032421.01.T01 | MTR_4g485590 | 23.034 | 356 | 202 | 11 | 16 | 326 | 9 | 337 | 1.04e-13 | 72.0 |
| MsG0680032421.01.T01 | MTR_0184s0040 | 25.936 | 374 | 213 | 17 | 4 | 323 | 9 | 372 | 1.06e-13 | 72.4 |
| MsG0680032421.01.T01 | MTR_0078s0190 | 25.936 | 374 | 213 | 17 | 4 | 323 | 9 | 372 | 1.06e-13 | 72.4 |
| MsG0680032421.01.T01 | MTR_4g031800 | 50.633 | 79 | 33 | 3 | 238 | 311 | 266 | 343 | 1.30e-13 | 72.0 |
| MsG0680032421.01.T01 | MTR_5g035580 | 25.753 | 365 | 188 | 17 | 4 | 314 | 2 | 337 | 1.39e-13 | 72.0 |
| MsG0680032421.01.T01 | MTR_8g064880 | 25.549 | 364 | 212 | 12 | 15 | 324 | 8 | 366 | 1.77e-13 | 71.6 |
| MsG0680032421.01.T01 | MTR_6g038300 | 24.069 | 349 | 205 | 12 | 16 | 319 | 11 | 344 | 2.17e-13 | 71.2 |
| MsG0680032421.01.T01 | MTR_8g009073 | 35.537 | 121 | 58 | 4 | 208 | 314 | 105 | 219 | 2.94e-13 | 70.1 |
| MsG0680032421.01.T01 | MTR_1g107360 | 26.027 | 365 | 195 | 15 | 15 | 324 | 8 | 352 | 2.99e-13 | 70.9 |
| MsG0680032421.01.T01 | MTR_8g090095 | 39.326 | 89 | 42 | 2 | 238 | 314 | 273 | 361 | 3.72e-13 | 70.5 |
| MsG0680032421.01.T01 | MTR_8g012745 | 32.639 | 144 | 78 | 4 | 184 | 311 | 210 | 350 | 4.08e-13 | 70.5 |
| MsG0680032421.01.T01 | MTR_8g027885 | 24.654 | 361 | 180 | 13 | 17 | 311 | 19 | 353 | 4.21e-13 | 70.5 |
| MsG0680032421.01.T01 | MTR_6g033725 | 24.444 | 360 | 208 | 12 | 17 | 323 | 5 | 353 | 5.58e-13 | 70.1 |
| MsG0680032421.01.T01 | MTR_3g069710 | 24.234 | 359 | 199 | 12 | 5 | 312 | 1 | 337 | 6.83e-13 | 69.7 |
| MsG0680032421.01.T01 | MTR_8g009067 | 33.108 | 148 | 79 | 5 | 182 | 314 | 88 | 230 | 8.71e-13 | 68.9 |
| MsG0680032421.01.T01 | MTR_1g107380 | 25.753 | 365 | 194 | 15 | 15 | 318 | 12 | 360 | 1.98e-12 | 68.6 |
| MsG0680032421.01.T01 | MTR_8g012630 | 40.426 | 94 | 39 | 2 | 238 | 314 | 206 | 299 | 1.98e-12 | 68.2 |
| MsG0680032421.01.T01 | MTR_8g012635 | 31.081 | 148 | 83 | 4 | 184 | 314 | 210 | 355 | 2.14e-12 | 68.2 |
| MsG0680032421.01.T01 | MTR_5g027210 | 23.861 | 373 | 206 | 13 | 14 | 313 | 2 | 369 | 2.20e-12 | 68.2 |
| MsG0680032421.01.T01 | MTR_0184s0030 | 33.913 | 115 | 62 | 1 | 211 | 311 | 234 | 348 | 3.12e-12 | 67.8 |
| MsG0680032421.01.T01 | MTR_4g117890 | 34.532 | 139 | 73 | 5 | 191 | 313 | 211 | 347 | 4.44e-12 | 67.4 |
| MsG0680032421.01.T01 | MTR_8g074550 | 25.974 | 385 | 179 | 17 | 13 | 313 | 5 | 367 | 4.57e-12 | 67.4 |
| MsG0680032421.01.T01 | MTR_8g012730 | 36.449 | 107 | 51 | 2 | 225 | 314 | 86 | 192 | 5.25e-12 | 66.2 |
| MsG0680032421.01.T01 | MTR_8g012650 | 31.757 | 148 | 82 | 4 | 184 | 314 | 210 | 355 | 8.87e-12 | 66.2 |
| MsG0680032421.01.T01 | MTR_8g077590 | 35.965 | 114 | 56 | 3 | 211 | 312 | 240 | 348 | 1.10e-11 | 66.2 |
| MsG0680032421.01.T01 | MTR_1g019520 | 38.298 | 94 | 38 | 2 | 238 | 314 | 6 | 96 | 1.27e-11 | 63.9 |
| MsG0680032421.01.T01 | MTR_6g033675 | 33.333 | 123 | 68 | 6 | 207 | 323 | 242 | 356 | 1.56e-11 | 65.5 |
| MsG0680032421.01.T01 | MTR_5g016480 | 41.758 | 91 | 47 | 3 | 238 | 324 | 275 | 363 | 1.58e-11 | 65.5 |
| MsG0680032421.01.T01 | MTR_2g035020 | 25.745 | 369 | 182 | 16 | 15 | 314 | 10 | 355 | 1.73e-11 | 65.5 |
| MsG0680032421.01.T01 | MTR_4g064987 | 22.414 | 348 | 214 | 12 | 17 | 323 | 9 | 341 | 2.27e-11 | 65.1 |
| MsG0680032421.01.T01 | MTR_6g005600 | 39.785 | 93 | 40 | 2 | 238 | 314 | 259 | 351 | 2.29e-11 | 65.1 |
| MsG0680032421.01.T01 | MTR_7g070800 | 24.148 | 352 | 206 | 14 | 15 | 313 | 5 | 348 | 2.46e-11 | 65.1 |
| MsG0680032421.01.T01 | MTR_5g019580 | 33.871 | 124 | 60 | 3 | 205 | 311 | 263 | 381 | 2.55e-11 | 65.1 |
| MsG0680032421.01.T01 | MTR_5g019580 | 33.871 | 124 | 60 | 3 | 205 | 311 | 239 | 357 | 3.20e-11 | 64.7 |
| MsG0680032421.01.T01 | MTR_8g006260 | 32.515 | 163 | 79 | 7 | 182 | 323 | 209 | 361 | 4.48e-11 | 64.3 |
| MsG0680032421.01.T01 | MTR_4g079280 | 27.461 | 193 | 128 | 5 | 19 | 209 | 1 | 183 | 4.91e-11 | 61.6 |
| MsG0680032421.01.T01 | MTR_4g064987 | 22.284 | 359 | 207 | 13 | 17 | 323 | 9 | 347 | 5.68e-11 | 63.9 |
| MsG0680032421.01.T01 | MTR_4g128690 | 41.935 | 93 | 48 | 4 | 238 | 329 | 266 | 353 | 8.91e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680032421.01.T01 | AT2G22590 | 34.483 | 435 | 191 | 10 | 1 | 347 | 1 | 429 | 1.16e-77 | 246 |
| MsG0680032421.01.T01 | AT5G49690 | 32.854 | 417 | 185 | 8 | 15 | 347 | 9 | 414 | 5.11e-66 | 215 |
| MsG0680032421.01.T01 | AT5G65550 | 31.116 | 421 | 195 | 11 | 15 | 347 | 8 | 421 | 4.22e-61 | 203 |
| MsG0680032421.01.T01 | AT4G27570 | 29.254 | 335 | 183 | 11 | 15 | 310 | 6 | 325 | 3.24e-32 | 125 |
| MsG0680032421.01.T01 | AT3G29630 | 29.674 | 337 | 176 | 12 | 15 | 310 | 5 | 321 | 8.06e-32 | 124 |
| MsG0680032421.01.T01 | AT4G27560 | 28.955 | 335 | 184 | 11 | 15 | 310 | 6 | 325 | 1.40e-31 | 124 |
| MsG0680032421.01.T01 | AT1G64920 | 30.383 | 339 | 171 | 13 | 13 | 309 | 3 | 318 | 4.89e-30 | 119 |
| MsG0680032421.01.T01 | AT1G64910 | 27.059 | 340 | 183 | 12 | 13 | 310 | 3 | 319 | 3.28e-29 | 117 |
| MsG0680032421.01.T01 | AT5G54010 | 27.844 | 334 | 190 | 11 | 15 | 310 | 5 | 325 | 1.56e-28 | 115 |
| MsG0680032421.01.T01 | AT2G22930 | 27.893 | 337 | 182 | 11 | 14 | 310 | 4 | 319 | 3.01e-28 | 114 |
| MsG0680032421.01.T01 | AT5G54060 | 28.977 | 352 | 192 | 14 | 5 | 309 | 3 | 343 | 3.74e-28 | 114 |
| MsG0680032421.01.T01 | AT5G53990 | 27.035 | 344 | 178 | 11 | 13 | 310 | 3 | 319 | 1.37e-27 | 112 |
| MsG0680032421.01.T01 | AT4G09500 | 27.679 | 336 | 182 | 10 | 15 | 310 | 5 | 319 | 1.62e-26 | 109 |
| MsG0680032421.01.T01 | AT1G50580 | 27.844 | 334 | 183 | 13 | 15 | 309 | 5 | 319 | 2.82e-23 | 100 |
| MsG0680032421.01.T01 | AT5G12890 | 27.604 | 384 | 187 | 16 | 13 | 324 | 7 | 371 | 4.62e-21 | 94.4 |
| MsG0680032421.01.T01 | AT2G36780 | 26.575 | 365 | 187 | 14 | 14 | 313 | 12 | 360 | 7.78e-21 | 93.6 |
| MsG0680032421.01.T01 | AT2G36760 | 25.208 | 361 | 195 | 14 | 15 | 313 | 13 | 360 | 3.27e-20 | 92.0 |
| MsG0680032421.01.T01 | AT4G34135 | 23.836 | 365 | 208 | 11 | 9 | 313 | 4 | 358 | 6.99e-20 | 90.9 |
| MsG0680032421.01.T01 | AT4G34131 | 24.658 | 365 | 198 | 12 | 13 | 313 | 7 | 358 | 8.55e-18 | 84.7 |
| MsG0680032421.01.T01 | AT1G51210 | 26.409 | 337 | 194 | 13 | 16 | 313 | 20 | 341 | 1.30e-17 | 84.0 |
| MsG0680032421.01.T01 | AT2G36770 | 23.889 | 360 | 201 | 13 | 15 | 313 | 13 | 360 | 2.09e-17 | 83.6 |
| MsG0680032421.01.T01 | AT1G73880 | 24.538 | 379 | 205 | 17 | 5 | 323 | 3 | 360 | 4.35e-17 | 82.4 |
| MsG0680032421.01.T01 | AT4G15480 | 25.326 | 383 | 217 | 13 | 1 | 326 | 1 | 371 | 6.00e-16 | 79.3 |
| MsG0680032421.01.T01 | AT2G16890 | 25.070 | 355 | 186 | 16 | 16 | 310 | 9 | 343 | 6.28e-16 | 79.0 |
| MsG0680032421.01.T01 | AT2G23260 | 27.778 | 342 | 199 | 13 | 16 | 319 | 10 | 341 | 6.67e-16 | 79.0 |
| MsG0680032421.01.T01 | AT2G16890 | 25.352 | 355 | 185 | 16 | 16 | 310 | 9 | 343 | 6.74e-16 | 78.6 |
| MsG0680032421.01.T01 | AT3G53160 | 25.281 | 356 | 201 | 12 | 15 | 313 | 7 | 354 | 1.24e-15 | 78.2 |
| MsG0680032421.01.T01 | AT4G34138 | 22.606 | 376 | 207 | 12 | 15 | 323 | 10 | 368 | 1.34e-15 | 78.2 |
| MsG0680032421.01.T01 | AT1G07250 | 26.757 | 370 | 202 | 18 | 13 | 323 | 3 | 362 | 1.27e-14 | 75.1 |
| MsG0680032421.01.T01 | AT1G06000 | 26.866 | 335 | 211 | 14 | 11 | 323 | 5 | 327 | 2.35e-14 | 74.3 |
| MsG0680032421.01.T01 | AT1G10400 | 33.333 | 141 | 83 | 4 | 185 | 322 | 220 | 352 | 3.85e-14 | 73.6 |
| MsG0680032421.01.T01 | AT1G05680 | 24.294 | 354 | 209 | 12 | 16 | 324 | 6 | 345 | 1.70e-13 | 71.6 |
| MsG0680032421.01.T01 | AT3G50740 | 24.377 | 361 | 195 | 14 | 16 | 312 | 7 | 353 | 2.67e-13 | 71.2 |
| MsG0680032421.01.T01 | AT5G05880 | 25.352 | 355 | 212 | 18 | 10 | 323 | 2 | 344 | 3.17e-13 | 70.9 |
| MsG0680032421.01.T01 | AT2G23250 | 25.994 | 327 | 185 | 12 | 19 | 305 | 1 | 310 | 6.13e-13 | 69.7 |
| MsG0680032421.01.T01 | AT3G46690 | 23.324 | 343 | 205 | 10 | 16 | 314 | 9 | 337 | 7.26e-13 | 69.7 |
| MsG0680032421.01.T01 | AT5G05870 | 25.788 | 349 | 193 | 17 | 16 | 313 | 8 | 341 | 7.94e-13 | 69.7 |
| MsG0680032421.01.T01 | AT3G16520 | 28.916 | 166 | 96 | 6 | 166 | 323 | 203 | 354 | 1.03e-12 | 69.3 |
| MsG0680032421.01.T01 | AT3G16520 | 28.916 | 166 | 96 | 6 | 166 | 323 | 203 | 354 | 1.11e-12 | 69.3 |
| MsG0680032421.01.T01 | AT3G16520 | 28.916 | 166 | 96 | 6 | 166 | 323 | 203 | 354 | 1.16e-12 | 68.9 |
| MsG0680032421.01.T01 | AT1G05675 | 24.438 | 356 | 210 | 12 | 16 | 326 | 6 | 347 | 1.77e-12 | 68.6 |
| MsG0680032421.01.T01 | AT2G15490 | 31.724 | 145 | 92 | 4 | 185 | 323 | 222 | 365 | 2.15e-12 | 68.2 |
| MsG0680032421.01.T01 | AT5G14860 | 24.176 | 364 | 191 | 15 | 14 | 310 | 6 | 351 | 2.48e-12 | 68.2 |
| MsG0680032421.01.T01 | AT2G31790 | 24.225 | 355 | 209 | 13 | 12 | 319 | 4 | 345 | 2.57e-12 | 68.2 |
| MsG0680032421.01.T01 | AT2G15480 | 29.319 | 191 | 113 | 7 | 167 | 347 | 212 | 390 | 4.57e-12 | 67.4 |
| MsG0680032421.01.T01 | AT3G21790 | 33.333 | 141 | 78 | 3 | 185 | 313 | 218 | 354 | 5.14e-12 | 67.4 |
| MsG0680032421.01.T01 | AT2G18570 | 32.667 | 150 | 76 | 4 | 182 | 314 | 206 | 347 | 6.35e-12 | 67.0 |
| MsG0680032421.01.T01 | AT2G15480 | 29.319 | 191 | 113 | 7 | 167 | 347 | 212 | 390 | 6.61e-12 | 67.0 |
| MsG0680032421.01.T01 | AT2G15490 | 31.081 | 148 | 92 | 4 | 185 | 323 | 222 | 368 | 7.65e-12 | 66.6 |
| MsG0680032421.01.T01 | AT5G38010 | 23.718 | 312 | 179 | 10 | 16 | 282 | 10 | 307 | 1.24e-11 | 65.9 |
| MsG0680032421.01.T01 | AT5G66690 | 25.946 | 370 | 194 | 15 | 16 | 323 | 7 | 358 | 1.91e-11 | 65.5 |
| MsG0680032421.01.T01 | AT1G22370 | 23.056 | 360 | 206 | 15 | 16 | 314 | 13 | 362 | 2.41e-11 | 65.1 |
| MsG0680032421.01.T01 | AT5G05890 | 23.889 | 360 | 215 | 17 | 10 | 323 | 2 | 348 | 3.47e-11 | 64.7 |
| MsG0680032421.01.T01 | AT1G30530 | 36.667 | 90 | 53 | 3 | 237 | 326 | 263 | 348 | 6.38e-11 | 63.9 |
| MsG0680032421.01.T01 | AT2G30150 | 25.157 | 318 | 185 | 11 | 16 | 289 | 13 | 321 | 7.21e-11 | 63.5 |
Find 89 sgRNAs with CRISPR-Local
Find 119 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCTTGGTTACCTTTCTTT+TGG | 0.173200 | 6:+40803398 | MsG0680032421.01.T01:CDS |
| AGGTAACCAGTTAGGTTTAA+TGG | 0.211992 | 6:-40802760 | None:intergenic |
| ACTTCAACCATTCATCAATT+TGG | 0.212411 | 6:+40802678 | MsG0680032421.01.T01:CDS |
| TCTATTGTTTACATTGGATT+TGG | 0.227229 | 6:+40803319 | MsG0680032421.01.T01:CDS |
| CTAATGGAATTGAGCTTTCT+TGG | 0.230689 | 6:+40803383 | MsG0680032421.01.T01:CDS |
| ACTTGTATAGCCCACCAAAA+TGG | 0.287396 | 6:+40802981 | MsG0680032421.01.T01:CDS |
| GATGAATGGTTGAAGTGTTT+TGG | 0.290001 | 6:-40802671 | None:intergenic |
| CTATTGTTTACATTGGATTT+GGG | 0.294596 | 6:+40803320 | MsG0680032421.01.T01:CDS |
| GTTTGGAAAGGAACCCATTT+TGG | 0.295841 | 6:-40802995 | None:intergenic |
| CAAAAGAACGCGGAATTGTT+TGG | 0.299446 | 6:+40803479 | MsG0680032421.01.T01:CDS |
| GTTCGTTCCTCGAATCCTTT+AGG | 0.315143 | 6:-40803457 | None:intergenic |
| AATGTTCCATTAAACCTAAC+TGG | 0.336194 | 6:+40802754 | MsG0680032421.01.T01:CDS |
| CTATACCAACCTCAATGTTT+TGG | 0.343563 | 6:-40803730 | None:intergenic |
| TCGGCTATTAAGAATGATTC+TGG | 0.349331 | 6:+40803058 | MsG0680032421.01.T01:CDS |
| GCCAAGATTCTTGCTCAAAA+TGG | 0.354651 | 6:+40802592 | MsG0680032421.01.T01:CDS |
| AGCCAGATGGGGCTATTACT+AGG | 0.367306 | 6:+40803697 | MsG0680032421.01.T01:CDS |
| CCTTGTAGTTCTTCTATGTA+TGG | 0.374866 | 6:-40802715 | None:intergenic |
| GCGGAATTGTTTGGAAAACT+TGG | 0.382355 | 6:+40803488 | MsG0680032421.01.T01:CDS |
| ATAGGGCAAGCTTGGAGCTT+GGG | 0.383665 | 6:+40802923 | MsG0680032421.01.T01:CDS |
| GTTTGAGATGAATAGTTGTT+TGG | 0.384820 | 6:-40803012 | None:intergenic |
| CTGTCGGTTCGTTCCCTTGG+TGG | 0.385914 | 6:-40802956 | None:intergenic |
| TCTCTGTCGGTTCGTTCCCT+TGG | 0.399007 | 6:-40802959 | None:intergenic |
| GATATAACCGAGTTAGCTAA+TGG | 0.417970 | 6:+40803367 | MsG0680032421.01.T01:CDS |
| GCTAACTTAGGTAACCAGTT+AGG | 0.421032 | 6:-40802768 | None:intergenic |
| CTTGTATAGCCCACCAAAAT+GGG | 0.425146 | 6:+40802982 | MsG0680032421.01.T01:CDS |
| CTCAATTCCATTAGCTAACT+CGG | 0.436445 | 6:-40803374 | None:intergenic |
| CAAGTCTCTTCATGTTGTAA+TGG | 0.438409 | 6:+40802525 | MsG0680032421.01.T01:CDS |
| ATACAAGGTACCTGTGGTTC+CGG | 0.442848 | 6:+40803192 | MsG0680032421.01.T01:CDS |
| AAACATTGAGGTTGGTATAG+TGG | 0.448257 | 6:+40803733 | MsG0680032421.01.T01:CDS |
| ATTTCAGCATAGGGCAAGCT+TGG | 0.456750 | 6:+40802915 | MsG0680032421.01.T01:CDS |
| TTCGTCGTCTCTTATCTGCA+TGG | 0.458480 | 6:-40803233 | None:intergenic |
| CATAGGGCAAGCTTGGAGCT+TGG | 0.470909 | 6:+40802922 | MsG0680032421.01.T01:CDS |
| ATTATTAACAATTGAAGCCA+TGG | 0.471650 | 6:-40802488 | None:intergenic |
| TCATCTTCTATTGTTTACAT+TGG | 0.472355 | 6:+40803313 | MsG0680032421.01.T01:CDS |
| GCCCCATCTGGCTCACTCCT+TGG | 0.475052 | 6:-40803687 | None:intergenic |
| CTTGTGCGTATTTCAGCATA+GGG | 0.480182 | 6:+40802906 | MsG0680032421.01.T01:CDS |
| CCTTGTGCGTATTTCAGCAT+AGG | 0.483072 | 6:+40802905 | MsG0680032421.01.T01:CDS |
| CGGAATTGTTTGGAAAACTT+GGG | 0.492448 | 6:+40803489 | MsG0680032421.01.T01:CDS |
| TCGTCGTCTCTTATCTGCAT+GGG | 0.497674 | 6:-40803232 | None:intergenic |
| AATGGTCCCATGGCTAGCTA+TGG | 0.500203 | 6:+40802543 | MsG0680032421.01.T01:CDS |
| ACAAGGAATGTTGAAACTCT+TGG | 0.501135 | 6:-40802888 | None:intergenic |
| TACCAAGGAGTGAGCCAGAT+GGG | 0.501584 | 6:+40803685 | MsG0680032421.01.T01:CDS |
| TCTCTTATCTGCATGGGTGG+TGG | 0.502781 | 6:-40803226 | None:intergenic |
| CTAGAGAACTTGAAGGTGAA+TGG | 0.505793 | 6:+40803149 | MsG0680032421.01.T01:CDS |
| GAACCACAGGTACCTTGTAT+TGG | 0.506596 | 6:-40803189 | None:intergenic |
| TCCCTAGTAATAGCCCCATC+TGG | 0.514598 | 6:-40803699 | None:intergenic |
| AGGTACCTGTGGTTCCGGTC+GGG | 0.515026 | 6:+40803197 | MsG0680032421.01.T01:CDS |
| TCCTGACTGGGTGAAAATCA+AGG | 0.519477 | 6:+40803270 | MsG0680032421.01.T01:CDS |
| GGTACACTTGAATTACCTAA+AGG | 0.524004 | 6:+40803442 | MsG0680032421.01.T01:CDS |
| GGTGAAAATCAAGGCTTGGT+TGG | 0.524541 | 6:+40803279 | MsG0680032421.01.T01:CDS |
| AGAACCTCTAGAGAACTTGA+AGG | 0.526011 | 6:+40803142 | MsG0680032421.01.T01:CDS |
| TTCATGTTGTAATGGTCCCA+TGG | 0.527374 | 6:+40802533 | MsG0680032421.01.T01:CDS |
| TGAATTACCTAAAGGATTCG+AGG | 0.527492 | 6:+40803450 | MsG0680032421.01.T01:CDS |
| AAGATGAAAAGAATCCTGAC+TGG | 0.529148 | 6:+40803257 | MsG0680032421.01.T01:CDS |
| AGTTCTTCTATGTATGGTAA+AGG | 0.536100 | 6:-40802709 | None:intergenic |
| AACACTCGCGCATAGTTTGT+CGG | 0.536164 | 6:-40803104 | None:intergenic |
| AGATGAATAGTTGTTTGGAA+AGG | 0.539146 | 6:-40803007 | None:intergenic |
| AAGGTACCTGTGGTTCCGGT+CGG | 0.539884 | 6:+40803196 | MsG0680032421.01.T01:CDS |
| GCCAGATGGGGCTATTACTA+GGG | 0.540774 | 6:+40803698 | MsG0680032421.01.T01:CDS |
| TCTTTCAAAGCCCAAAAGAA+AGG | 0.546449 | 6:-40803409 | None:intergenic |
| GGCTTTGAAAGATCTTAAAG+AGG | 0.553468 | 6:+40803420 | MsG0680032421.01.T01:CDS |
| TTATATTTCTGACCAATACA+AGG | 0.562653 | 6:+40803177 | MsG0680032421.01.T01:CDS |
| TTATTAACAATTGAAGCCAT+GGG | 0.566540 | 6:-40802487 | None:intergenic |
| AGAAAAGAAAGTAGCTGTTG+AGG | 0.566916 | 6:+40803662 | MsG0680032421.01.T01:CDS |
| ATGGTCCCATGGCTAGCTAT+GGG | 0.569152 | 6:+40802544 | MsG0680032421.01.T01:CDS |
| TTCACCTTCAAGTTCTCTAG+AGG | 0.574211 | 6:-40803146 | None:intergenic |
| AGCAACCCGACCGGAACCAC+AGG | 0.575693 | 6:-40803202 | None:intergenic |
| ACTGGGTGAAAATCAAGGCT+TGG | 0.576858 | 6:+40803275 | MsG0680032421.01.T01:CDS |
| ATGTGTCCCATAGCTAGCCA+TGG | 0.577673 | 6:-40802550 | None:intergenic |
| AAGTAGCTGTTGAGGTACCA+AGG | 0.579468 | 6:+40803670 | MsG0680032421.01.T01:CDS |
| TGTTGCCAAAACATTGAGGT+TGG | 0.582806 | 6:+40803725 | MsG0680032421.01.T01:CDS |
| ACTCTGTTGCCAAAACATTG+AGG | 0.588124 | 6:+40803721 | MsG0680032421.01.T01:CDS |
| TATTCATCTCAAACGTTACG+AGG | 0.592025 | 6:+40803021 | MsG0680032421.01.T01:CDS |
| GGGTTTCTTTAATCCACCAA+GGG | 0.599138 | 6:+40802943 | MsG0680032421.01.T01:CDS |
| GGTGGTGGAAGCAACCCGAC+CGG | 0.599747 | 6:-40803211 | None:intergenic |
| CGAGGTTATGAGAATACAGT+CGG | 0.602708 | 6:+40803039 | MsG0680032421.01.T01:CDS |
| GCTTTGAAAGATCTTAAAGA+GGG | 0.611607 | 6:+40803421 | MsG0680032421.01.T01:CDS |
| TTGAAACTCTTGGCTATCGA+CGG | 0.616830 | 6:-40802878 | None:intergenic |
| TGTGTCCCATAGCTAGCCAT+GGG | 0.617525 | 6:-40802549 | None:intergenic |
| TGGGCTATACAAGTCTCTGT+CGG | 0.627710 | 6:-40802972 | None:intergenic |
| TGGGTTTCTTTAATCCACCA+AGG | 0.631561 | 6:+40802942 | MsG0680032421.01.T01:CDS |
| TCGTCTCTTATCTGCATGGG+TGG | 0.635189 | 6:-40803229 | None:intergenic |
| GTACCAAGGAGTGAGCCAGA+TGG | 0.642683 | 6:+40803684 | MsG0680032421.01.T01:CDS |
| CCATACATAGAAGAACTACA+AGG | 0.646424 | 6:+40802715 | MsG0680032421.01.T01:CDS |
| ACCAAGGAGTGAGCCAGATG+GGG | 0.649556 | 6:+40803686 | MsG0680032421.01.T01:CDS |
| AGATGAAAAGAATCCTGACT+GGG | 0.653371 | 6:+40803258 | MsG0680032421.01.T01:CDS |
| TGACCAATACAAGGTACCTG+TGG | 0.670490 | 6:+40803186 | MsG0680032421.01.T01:CDS |
| CCTATGCTGAAATACGCACA+AGG | 0.670965 | 6:-40802905 | None:intergenic |
| GAGGAACGAACAAAAGAACG+CGG | 0.779735 | 6:+40803469 | MsG0680032421.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATGAGTTACGATTTTAAATT+GGG | - | Chr6:40803517-40803536 | None:intergenic | 20.0% |
| ! | AAACATTGGTCAAGTAAATA+AGG | - | Chr6:40803624-40803643 | None:intergenic | 25.0% |
| ! | CTATTGTTTACATTGGATTT+GGG | + | Chr6:40803320-40803339 | MsG0680032421.01.T01:CDS | 25.0% |
| ! | TCATCTTCTATTGTTTACAT+TGG | + | Chr6:40803313-40803332 | MsG0680032421.01.T01:CDS | 25.0% |
| ! | TCTATTGTTTACATTGGATT+TGG | + | Chr6:40803319-40803338 | MsG0680032421.01.T01:CDS | 25.0% |
| !! | CATGAGTTACGATTTTAAAT+TGG | - | Chr6:40803518-40803537 | None:intergenic | 25.0% |
| !! | GATTTTACCAAATTGATGAA+TGG | - | Chr6:40802688-40802707 | None:intergenic | 25.0% |
| !! | TTATATTTCTGACCAATACA+AGG | + | Chr6:40803177-40803196 | MsG0680032421.01.T01:CDS | 25.0% |
| !!! | CATTTGATCAATGTTTTTAG+GGG | - | Chr6:40802641-40802660 | None:intergenic | 25.0% |
| !!! | GCATTTGATCAATGTTTTTA+GGG | - | Chr6:40802642-40802661 | None:intergenic | 25.0% |
| !!! | TAGAGGTTCTAAAAAGAAAA+AGG | - | Chr6:40803132-40803151 | None:intergenic | 25.0% |
| AAACCATCATAAGCTAACTT+AGG | - | Chr6:40802783-40802802 | None:intergenic | 30.0% | |
| AATGTTCCATTAAACCTAAC+TGG | + | Chr6:40802754-40802773 | MsG0680032421.01.T01:CDS | 30.0% | |
| ACTTCAACCATTCATCAATT+TGG | + | Chr6:40802678-40802697 | MsG0680032421.01.T01:CDS | 30.0% | |
| AGATGAATAGTTGTTTGGAA+AGG | - | Chr6:40803010-40803029 | None:intergenic | 30.0% | |
| AGTTCTTCTATGTATGGTAA+AGG | - | Chr6:40802712-40802731 | None:intergenic | 30.0% | |
| ATCGTAACTCATGAATCAAT+TGG | + | Chr6:40803525-40803544 | MsG0680032421.01.T01:intron | 30.0% | |
| ! | GGCATTTGATCAATGTTTTT+AGG | - | Chr6:40802643-40802662 | None:intergenic | 30.0% |
| ! | GTTTGAGATGAATAGTTGTT+TGG | - | Chr6:40803015-40803034 | None:intergenic | 30.0% |
| ! | TTACCTAAGTTAGCTTATGA+TGG | + | Chr6:40802777-40802796 | MsG0680032421.01.T01:intron | 30.0% |
| ! | TTCTTGGTTACCTTTCTTTT+GGG | + | Chr6:40803399-40803418 | MsG0680032421.01.T01:CDS | 30.0% |
| ! | TTTCTTGGTTACCTTTCTTT+TGG | + | Chr6:40803398-40803417 | MsG0680032421.01.T01:CDS | 30.0% |
| !! | ATGAATGGTTGAAGTGTTTT+GGG | - | Chr6:40802673-40802692 | None:intergenic | 30.0% |
| !! | GCTTTGAAAGATCTTAAAGA+GGG | + | Chr6:40803421-40803440 | MsG0680032421.01.T01:CDS | 30.0% |
| !!! | CATACTACCTTTTTTTGAGT+TGG | + | Chr6:40802570-40802589 | MsG0680032421.01.T01:CDS | 30.0% |
| !!! | CTTTGAAGTTTTGAGTATCT+CGG | - | Chr6:40802819-40802838 | None:intergenic | 30.0% |
| AAGATGAAAAGAATCCTGAC+TGG | + | Chr6:40803257-40803276 | MsG0680032421.01.T01:CDS | 35.0% | |
| ACAAGGAATGTTGAAACTCT+TGG | - | Chr6:40802891-40802910 | None:intergenic | 35.0% | |
| AGAAAAGAAAGTAGCTGTTG+AGG | + | Chr6:40803662-40803681 | MsG0680032421.01.T01:CDS | 35.0% | |
| AGATGAAAAGAATCCTGACT+GGG | + | Chr6:40803258-40803277 | MsG0680032421.01.T01:CDS | 35.0% | |
| AGGTAACCAGTTAGGTTTAA+TGG | - | Chr6:40802763-40802782 | None:intergenic | 35.0% | |
| ATCTTGGCCAACTCAAAAAA+AGG | - | Chr6:40802580-40802599 | None:intergenic | 35.0% | |
| CAAAACTTCAAAGCCTGATT+GGG | + | Chr6:40802826-40802845 | MsG0680032421.01.T01:intron | 35.0% | |
| CAAGTCTCTTCATGTTGTAA+TGG | + | Chr6:40802525-40802544 | MsG0680032421.01.T01:CDS | 35.0% | |
| CCATACATAGAAGAACTACA+AGG | + | Chr6:40802715-40802734 | MsG0680032421.01.T01:CDS | 35.0% | |
| CCTTGTAGTTCTTCTATGTA+TGG | - | Chr6:40802718-40802737 | None:intergenic | 35.0% | |
| CGGAATTGTTTGGAAAACTT+GGG | + | Chr6:40803489-40803508 | MsG0680032421.01.T01:CDS | 35.0% | |
| CTAATGGAATTGAGCTTTCT+TGG | + | Chr6:40803383-40803402 | MsG0680032421.01.T01:CDS | 35.0% | |
| CTCAATTCCATTAGCTAACT+CGG | - | Chr6:40803377-40803396 | None:intergenic | 35.0% | |
| GATATAACCGAGTTAGCTAA+TGG | + | Chr6:40803367-40803386 | MsG0680032421.01.T01:CDS | 35.0% | |
| GGTACACTTGAATTACCTAA+AGG | + | Chr6:40803442-40803461 | MsG0680032421.01.T01:CDS | 35.0% | |
| GTAACTCATGAATCAATTGG+TGG | + | Chr6:40803528-40803547 | MsG0680032421.01.T01:intron | 35.0% | |
| GTACTCTTGCAAACAAACAT+TGG | - | Chr6:40803638-40803657 | None:intergenic | 35.0% | |
| TATTCATCTCAAACGTTACG+AGG | + | Chr6:40803021-40803040 | MsG0680032421.01.T01:CDS | 35.0% | |
| TCAAAACTTCAAAGCCTGAT+TGG | + | Chr6:40802825-40802844 | MsG0680032421.01.T01:intron | 35.0% | |
| TCGGCTATTAAGAATGATTC+TGG | + | Chr6:40803058-40803077 | MsG0680032421.01.T01:CDS | 35.0% | |
| TCTTTCAAAGCCCAAAAGAA+AGG | - | Chr6:40803412-40803431 | None:intergenic | 35.0% | |
| TGAATTACCTAAAGGATTCG+AGG | + | Chr6:40803450-40803469 | MsG0680032421.01.T01:CDS | 35.0% | |
| ! | ACCATTTTGAGCAAGAATCT+TGG | - | Chr6:40802596-40802615 | None:intergenic | 35.0% |
| ! | CTATACCAACCTCAATGTTT+TGG | - | Chr6:40803733-40803752 | None:intergenic | 35.0% |
| !! | GATGAATGGTTGAAGTGTTT+TGG | - | Chr6:40802674-40802693 | None:intergenic | 35.0% |
| !! | GGCTTTGAAAGATCTTAAAG+AGG | + | Chr6:40803420-40803439 | MsG0680032421.01.T01:CDS | 35.0% |
| !! | GTCTTTGAGATGCTTTATCA+TGG | + | Chr6:40803579-40803598 | MsG0680032421.01.T01:intron | 35.0% |
| !! | GTTTTTAGGGGAGTTTATGA+AGG | - | Chr6:40802629-40802648 | None:intergenic | 35.0% |
| !! | TGAAGTGTTTTGGGTGTTTT+AGG | - | Chr6:40802664-40802683 | None:intergenic | 35.0% |
| !! | TTTTGAGTATCTCGGTAACA+TGG | - | Chr6:40802811-40802830 | None:intergenic | 35.0% |
| ACATCACAGAATACCCAATC+AGG | - | Chr6:40802842-40802861 | None:intergenic | 40.0% | |
| ACTCTGTTGCCAAAACATTG+AGG | + | Chr6:40803721-40803740 | MsG0680032421.01.T01:CDS | 40.0% | |
| ACTTGTATAGCCCACCAAAA+TGG | + | Chr6:40802981-40803000 | MsG0680032421.01.T01:CDS | 40.0% | |
| AGCATCTCAAAGACTGAACT+TGG | - | Chr6:40803573-40803592 | None:intergenic | 40.0% | |
| CAAAAGAACGCGGAATTGTT+TGG | + | Chr6:40803479-40803498 | MsG0680032421.01.T01:CDS | 40.0% | |
| CGAGGTTATGAGAATACAGT+CGG | + | Chr6:40803039-40803058 | MsG0680032421.01.T01:CDS | 40.0% | |
| CTAGAGAACTTGAAGGTGAA+TGG | + | Chr6:40803149-40803168 | MsG0680032421.01.T01:CDS | 40.0% | |
| CTTGTATAGCCCACCAAAAT+GGG | + | Chr6:40802982-40803001 | MsG0680032421.01.T01:CDS | 40.0% | |
| CTTGTGCGTATTTCAGCATA+GGG | + | Chr6:40802906-40802925 | MsG0680032421.01.T01:CDS | 40.0% | |
| GCCAAGATTCTTGCTCAAAA+TGG | + | Chr6:40802592-40802611 | MsG0680032421.01.T01:CDS | 40.0% | |
| GCGGAATTGTTTGGAAAACT+TGG | + | Chr6:40803488-40803507 | MsG0680032421.01.T01:CDS | 40.0% | |
| GCTAACTTAGGTAACCAGTT+AGG | - | Chr6:40802771-40802790 | None:intergenic | 40.0% | |
| GGGTTTCTTTAATCCACCAA+GGG | + | Chr6:40802943-40802962 | MsG0680032421.01.T01:CDS | 40.0% | |
| TCTGTGATGTGGTATCAGAT+TGG | + | Chr6:40802852-40802871 | MsG0680032421.01.T01:intron | 40.0% | |
| TGATTGGGTATTCTGTGATG+TGG | + | Chr6:40802841-40802860 | MsG0680032421.01.T01:intron | 40.0% | |
| TGGGTTTCTTTAATCCACCA+AGG | + | Chr6:40802942-40802961 | MsG0680032421.01.T01:CDS | 40.0% | |
| TGTTGCCAAAACATTGAGGT+TGG | + | Chr6:40803725-40803744 | MsG0680032421.01.T01:CDS | 40.0% | |
| TTCATGTTGTAATGGTCCCA+TGG | + | Chr6:40802533-40802552 | MsG0680032421.01.T01:CDS | 40.0% | |
| TTGAAACTCTTGGCTATCGA+CGG | - | Chr6:40802881-40802900 | None:intergenic | 40.0% | |
| ! | AGAACCTCTAGAGAACTTGA+AGG | + | Chr6:40803142-40803161 | MsG0680032421.01.T01:CDS | 40.0% |
| ! | GTTTGGAAAGGAACCCATTT+TGG | - | Chr6:40802998-40803017 | None:intergenic | 40.0% |
| ! | TTCACCTTCAAGTTCTCTAG+AGG | - | Chr6:40803149-40803168 | None:intergenic | 40.0% |
| ACTGGGTGAAAATCAAGGCT+TGG | + | Chr6:40803275-40803294 | MsG0680032421.01.T01:CDS | 45.0% | |
| ATTTCAGCATAGGGCAAGCT+TGG | + | Chr6:40802915-40802934 | MsG0680032421.01.T01:CDS | 45.0% | |
| CCTATGCTGAAATACGCACA+AGG | - | Chr6:40802908-40802927 | None:intergenic | 45.0% | |
| CCTTGTGCGTATTTCAGCAT+AGG | + | Chr6:40802905-40802924 | MsG0680032421.01.T01:CDS | 45.0% | |
| GAACCACAGGTACCTTGTAT+TGG | - | Chr6:40803192-40803211 | None:intergenic | 45.0% | |
| GAGGAACGAACAAAAGAACG+CGG | + | Chr6:40803469-40803488 | MsG0680032421.01.T01:CDS | 45.0% | |
| GGTGGTTGTATGACTCATTG+TGG | + | Chr6:40803546-40803565 | MsG0680032421.01.T01:intron | 45.0% | |
| GTTCGTTCCTCGAATCCTTT+AGG | - | Chr6:40803460-40803479 | None:intergenic | 45.0% | |
| TCCTGACTGGGTGAAAATCA+AGG | + | Chr6:40803270-40803289 | MsG0680032421.01.T01:CDS | 45.0% | |
| TCGTCGTCTCTTATCTGCAT+GGG | - | Chr6:40803235-40803254 | None:intergenic | 45.0% | |
| TGGGCTATACAAGTCTCTGT+CGG | - | Chr6:40802975-40802994 | None:intergenic | 45.0% | |
| TTCGTCGTCTCTTATCTGCA+TGG | - | Chr6:40803236-40803255 | None:intergenic | 45.0% | |
| ! | AACACTCGCGCATAGTTTGT+CGG | - | Chr6:40803107-40803126 | None:intergenic | 45.0% |
| ! | AAGTAGCTGTTGAGGTACCA+AGG | + | Chr6:40803670-40803689 | MsG0680032421.01.T01:CDS | 45.0% |
| ! | ATACAAGGTACCTGTGGTTC+CGG | + | Chr6:40803192-40803211 | MsG0680032421.01.T01:CDS | 45.0% |
| ! | GGTGAAAATCAAGGCTTGGT+TGG | + | Chr6:40803279-40803298 | MsG0680032421.01.T01:CDS | 45.0% |
| ! | TGACCAATACAAGGTACCTG+TGG | + | Chr6:40803186-40803205 | MsG0680032421.01.T01:CDS | 45.0% |
| ! | TGGAAAGGAACCCATTTTGG+TGG | - | Chr6:40802995-40803014 | None:intergenic | 45.0% |
| !! | GGAAAGGAACCCATTTTGGT+GGG | - | Chr6:40802994-40803013 | None:intergenic | 45.0% |
| AGCCAGATGGGGCTATTACT+AGG | + | Chr6:40803697-40803716 | MsG0680032421.01.T01:CDS | 50.0% | |
| ATAGGGCAAGCTTGGAGCTT+GGG | + | Chr6:40802923-40802942 | MsG0680032421.01.T01:CDS | 50.0% | |
| ATGTGTCCCATAGCTAGCCA+TGG | - | Chr6:40802553-40802572 | None:intergenic | 50.0% | |
| GCCAGATGGGGCTATTACTA+GGG | + | Chr6:40803698-40803717 | MsG0680032421.01.T01:CDS | 50.0% | |
| TACCAAGGAGTGAGCCAGAT+GGG | + | Chr6:40803685-40803704 | MsG0680032421.01.T01:CDS | 50.0% | |
| TCCCTAGTAATAGCCCCATC+TGG | - | Chr6:40803702-40803721 | None:intergenic | 50.0% | |
| TCGTCTCTTATCTGCATGGG+TGG | - | Chr6:40803232-40803251 | None:intergenic | 50.0% | |
| TCTCTTATCTGCATGGGTGG+TGG | - | Chr6:40803229-40803248 | None:intergenic | 50.0% | |
| TGTGTCCCATAGCTAGCCAT+GGG | - | Chr6:40802552-40802571 | None:intergenic | 50.0% | |
| ! | AATGGTCCCATGGCTAGCTA+TGG | + | Chr6:40802543-40802562 | MsG0680032421.01.T01:CDS | 50.0% |
| ! | ATGGTCCCATGGCTAGCTAT+GGG | + | Chr6:40802544-40802563 | MsG0680032421.01.T01:CDS | 50.0% |
| ! | GCCTTGATTTTCACCCAGTC+AGG | - | Chr6:40803274-40803293 | None:intergenic | 50.0% |
| ACCAAGGAGTGAGCCAGATG+GGG | + | Chr6:40803686-40803705 | MsG0680032421.01.T01:CDS | 55.0% | |
| CATAGGGCAAGCTTGGAGCT+TGG | + | Chr6:40802922-40802941 | MsG0680032421.01.T01:CDS | 55.0% | |
| GTACCAAGGAGTGAGCCAGA+TGG | + | Chr6:40803684-40803703 | MsG0680032421.01.T01:CDS | 55.0% | |
| ! | AAGGTACCTGTGGTTCCGGT+CGG | + | Chr6:40803196-40803215 | MsG0680032421.01.T01:CDS | 55.0% |
| !! | TCTCTGTCGGTTCGTTCCCT+TGG | - | Chr6:40802962-40802981 | None:intergenic | 55.0% |
| AGGTACCTGTGGTTCCGGTC+GGG | + | Chr6:40803197-40803216 | MsG0680032421.01.T01:CDS | 60.0% | |
| !! | CTGTCGGTTCGTTCCCTTGG+TGG | - | Chr6:40802959-40802978 | None:intergenic | 60.0% |
| AGCAACCCGACCGGAACCAC+AGG | - | Chr6:40803205-40803224 | None:intergenic | 65.0% | |
| ! | GCCCCATCTGGCTCACTCCT+TGG | - | Chr6:40803690-40803709 | None:intergenic | 65.0% |
| !! | GGTGGTGGAAGCAACCCGAC+CGG | - | Chr6:40803214-40803233 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr6 | gene | 40802490 | 40803752 | 40802490 | ID=MsG0680032421.01;Name=MsG0680032421.01 |
| Chr6 | mRNA | 40802490 | 40803752 | 40802490 | ID=MsG0680032421.01.T01;Parent=MsG0680032421.01;Name=MsG0680032421.01.T01;_AED=0.48;_eAED=0.48;_QI=0|0|0|1|1|1|3|0|347 |
| Chr6 | exon | 40802490 | 40802775 | 40802490 | ID=MsG0680032421.01.T01:exon:22149;Parent=MsG0680032421.01.T01 |
| Chr6 | exon | 40802870 | 40803527 | 40802870 | ID=MsG0680032421.01.T01:exon:22150;Parent=MsG0680032421.01.T01 |
| Chr6 | exon | 40803653 | 40803752 | 40803653 | ID=MsG0680032421.01.T01:exon:22151;Parent=MsG0680032421.01.T01 |
| Chr6 | CDS | 40802490 | 40802775 | 40802490 | ID=MsG0680032421.01.T01:cds;Parent=MsG0680032421.01.T01 |
| Chr6 | CDS | 40802870 | 40803527 | 40802870 | ID=MsG0680032421.01.T01:cds;Parent=MsG0680032421.01.T01 |
| Chr6 | CDS | 40803653 | 40803752 | 40803653 | ID=MsG0680032421.01.T01:cds;Parent=MsG0680032421.01.T01 |
| Gene Sequence |
| Protein sequence |
