AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680032790.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680032790.01.T01 MTR_3g074040 96.040 101 4 0 72 172 90 190 1.59e-64 203
MsG0680032790.01.T01 MTR_8g091330 77.551 98 22 0 74 171 74 171 2.69e-51 168
MsG0680032790.01.T01 MTR_8g091330 77.551 98 22 0 74 171 66 163 2.80e-51 168
MsG0680032790.01.T01 MTR_8g091330 77.647 85 19 0 87 171 1 85 3.27e-44 147
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680032790.01.T01 AT1G22170 82.353 102 18 0 72 173 74 175 1.24e-57 185
MsG0680032790.01.T01 AT1G22170 82.353 102 18 0 72 173 74 175 1.24e-57 185
MsG0680032790.01.T01 AT1G78050 68.992 129 34 1 50 172 47 175 1.25e-56 182

Find 53 sgRNAs with CRISPR-Local

Find 565 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAATTATGTAGATGATATT+TGG 0.166051 6:-49747545 None:intergenic
TTCGCTATGGGTTTGAATTT+TGG 0.203339 6:+49736639 None:intergenic
GAATGTTGCAATGGAAATTC+TGG 0.261018 6:+49746423 MsG0680032790.01.T01:CDS
ACGACTCACCGTGTCGAATA+AGG 0.265042 6:-49745232 None:intergenic
CTACCTTCTTACGGCGGTGC+TGG 0.280926 6:-49745421 None:intergenic
GGAGAAAATTGAGTACCTTT+TGG 0.281512 6:+49738347 MsG0680032790.01.T01:intron
CAAAGCCATGTTATGCAGTT+AGG 0.312642 6:+49736678 MsG0680032790.01.T01:CDS
AAACAGAGCATAGCATTCTT+TGG 0.320317 6:+49747484 MsG0680032790.01.T01:three_prime_UTR
CAGTTAGGACCGAGGCTTCT+TGG 0.352101 6:+49736693 MsG0680032790.01.T01:CDS
CAGCATTGGAGTACTCCTTC+AGG 0.357031 6:+49738416 MsG0680032790.01.T01:CDS
TACAAACAAGTGATACAATA+AGG 0.386028 6:-49747597 None:intergenic
GATGTAAATATGAGATCAAC+TGG 0.389772 6:-49745356 None:intergenic
AAACTCCAGGTACTCCAGTA+TGG 0.395760 6:-49747186 None:intergenic
AGTGGAGTTGTTAGTGGACT+TGG 0.412473 6:+49738375 MsG0680032790.01.T01:CDS
TTGGACAAGTTGACTATTCT+CGG 0.413404 6:-49741648 None:intergenic
TAGGACCGAGGCTTCTTGGC+AGG 0.415660 6:+49736697 MsG0680032790.01.T01:CDS
GAGACAAGTGGAGTTGTTAG+TGG 0.419382 6:+49738369 MsG0680032790.01.T01:CDS
TTGGCAGGGTTGACGATTCA+AGG 0.427680 6:+49736712 MsG0680032790.01.T01:CDS
CTCTCGTTGTGCATAACAAT+AGG 0.456310 6:-49745704 None:intergenic
GGAGTTACTGCTAGCAGCAT+TGG 0.459197 6:+49738402 MsG0680032790.01.T01:CDS
TGCTGGTCTAGCATCCATAC+TGG 0.459286 6:+49747172 MsG0680032790.01.T01:three_prime_UTR
TCATTCTCGCTACCTTCTTA+CGG 0.461824 6:-49745430 None:intergenic
CTTACGGCGGTGCTGGGTCA+TGG 0.466672 6:-49745414 None:intergenic
AAAGAATGCTATGCTCTGTT+TGG 0.472006 6:-49747482 None:intergenic
CAACTCCACTTGTCTCCAAA+AGG 0.476312 6:-49738362 None:intergenic
TACCTTCTTACGGCGGTGCT+GGG 0.479212 6:-49745420 None:intergenic
ATAGATGAGGCAATTGAAGC+TGG 0.487774 6:+49745314 MsG0680032790.01.T01:CDS
TTCGACACGGTGAGTCGTTG+TGG 0.492540 6:+49745237 MsG0680032790.01.T01:CDS
AATGAGAAGAATTTGTTCAC+AGG 0.510239 6:+49745260 MsG0680032790.01.T01:CDS
GTTGTTAGTGGACTTGGGAA+AGG 0.528717 6:+49738381 MsG0680032790.01.T01:CDS
GTGCTGGGTCATGGCAAGCA+TGG 0.530804 6:-49745405 None:intergenic
CCAAGCTGCTATTACTGGAA+TGG 0.532981 6:-49745779 None:intergenic
AGGACCGAGGCTTCTTGGCA+GGG 0.533687 6:+49736698 MsG0680032790.01.T01:CDS
GACCCAGCACCGCCGTAAGA+AGG 0.536334 6:+49745418 MsG0680032790.01.T01:CDS
AGCATCCATACTGGAGTACC+TGG 0.548331 6:+49747181 MsG0680032790.01.T01:three_prime_UTR
ATGATTGTTGTGTTCTAGTG+TGG 0.550416 6:+49746455 MsG0680032790.01.T01:CDS
TTTCCATTGCAACATTCCAT+TGG 0.554069 6:-49746417 None:intergenic
TTTATGTGTCTAACTGCCAA+TGG 0.562504 6:+49746401 MsG0680032790.01.T01:CDS
TGATGTATCACTTAGCAAGA+AGG 0.567349 6:+49745289 MsG0680032790.01.T01:CDS
TGGCAGGGTTGACGATTCAA+GGG 0.571112 6:+49736713 MsG0680032790.01.T01:CDS
TCAACCCTGCCAAGAAGCCT+CGG 0.575981 6:-49736702 None:intergenic
CTGCCAATGGAATGTTGCAA+TGG 0.579170 6:+49746414 MsG0680032790.01.T01:CDS
GTGGAGTTGTTAGTGGACTT+GGG 0.588312 6:+49738376 MsG0680032790.01.T01:CDS
GATGTATCACTTAGCAAGAA+GGG 0.593175 6:+49745290 MsG0680032790.01.T01:CDS
AGAGTGAACAAGCAAAGGCA+TGG 0.594259 6:+49745723 MsG0680032790.01.T01:CDS
CAACGAGAGTGAACAAGCAA+AGG 0.606715 6:+49745718 MsG0680032790.01.T01:CDS
TTGAGTTCAAGCAAAACTCC+AGG 0.610451 6:-49747199 None:intergenic
TATGTAGATGATATTTGGCG+AGG 0.623083 6:-49747540 None:intergenic
TAGCAAGAAGGGTATAGATG+AGG 0.640367 6:+49745301 MsG0680032790.01.T01:CDS
TCGGTCCTAACTGCATAACA+TGG 0.648908 6:-49736683 None:intergenic
GCTTTGATCCTTATTCGACA+CGG 0.654420 6:+49745224 MsG0680032790.01.T01:CDS
ATGTTATGCAGTTAGGACCG+AGG 0.674653 6:+49736685 MsG0680032790.01.T01:CDS
TTCTCGCTACCTTCTTACGG+CGG 0.686843 6:-49745427 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTAAAAATTTATTTTATTA+TGG - Chr6:49741978-49741997 None:intergenic 0.0%
!! AATATATATATATACATTTG+CGG + Chr6:49741935-49741954 MsG0680032790.01.T01:intron 10.0%
!! AGAAAAAAAATTCTAAATTA+GGG + Chr6:49741827-49741846 MsG0680032790.01.T01:intron 10.0%
!! ATGATTTAAAAAATCAATAA+AGG - Chr6:49743674-49743693 None:intergenic 10.0%
!! TTAAAAAAAAAAAACATTTG+CGG + Chr6:49741882-49741901 MsG0680032790.01.T01:intron 10.0%
!! TTGAAACAAAAAAAATTTAA+AGG + Chr6:49739436-49739455 MsG0680032790.01.T01:intron 10.0%
!!! ACCATTTTTTTAAAAATAAA+CGG - Chr6:49743853-49743872 None:intergenic 10.0%
!!! TTTATTGATTTTTTAAATCA+TGG + Chr6:49743673-49743692 MsG0680032790.01.T01:intron 10.0%
!!! TTTTCATTAAATTACATTTT+TGG - Chr6:49739524-49739543 None:intergenic 10.0%
!! AAAATAAAAACAAAGTTCTA+AGG + Chr6:49739051-49739070 MsG0680032790.01.T01:intron 15.0%
!! AAGAAATTAACCTTAAAAAA+TGG - Chr6:49743576-49743595 None:intergenic 15.0%
!! GAGAAAAAAAATTCTAAATT+AGG + Chr6:49741826-49741845 MsG0680032790.01.T01:intron 15.0%
!! TAAAGAAAATAGTAAACAAA+AGG + Chr6:49745961-49745980 MsG0680032790.01.T01:intron 15.0%
!! TACGAAAAAAATAAATAACA+TGG - Chr6:49746365-49746384 None:intergenic 15.0%
!! TTCAAATAAGTTAATCTAAA+AGG + Chr6:49738191-49738210 MsG0680032790.01.T01:intron 15.0%
!!! AATCATTAAAAAAGTTTTGA+AGG + Chr6:49742886-49742905 MsG0680032790.01.T01:intron 15.0%
!!! ATAATCTTTGACTTATTTTT+AGG + Chr6:49747442-49747461 MsG0680032790.01.T01:intron 15.0%
!!! ATGAACTTAAATTTTAAACT+AGG + Chr6:49743014-49743033 MsG0680032790.01.T01:intron 15.0%
!!! ATTGATTAAATTTTCATGTT+AGG + Chr6:49747563-49747582 MsG0680032790.01.T01:three_prime_UTR 15.0%
!!! CTGATTTTTTAATAAATTGT+TGG - Chr6:49742661-49742680 None:intergenic 15.0%
!!! TAGAACTTTGTTTTTATTTT+AGG - Chr6:49739051-49739070 None:intergenic 15.0%
!!! TCTTTACTTGTTATATTTTA+GGG + Chr6:49743937-49743956 MsG0680032790.01.T01:intron 15.0%
!!! TGAACTTAAATTTTAAACTA+GGG + Chr6:49743015-49743034 MsG0680032790.01.T01:intron 15.0%
!!! TGTTATTTATTTTTTTCGTA+AGG + Chr6:49746365-49746384 MsG0680032790.01.T01:intron 15.0%
!!! TTCATTTGAATCTTTTTTAT+TGG + Chr6:49745000-49745019 MsG0680032790.01.T01:intron 15.0%
!! AAAACAATGTATTCAAAGTA+CGG - Chr6:49744062-49744081 None:intergenic 20.0%
!! AAAGTGATAAATGAATAAGA+TGG + Chr6:49737911-49737930 MsG0680032790.01.T01:intron 20.0%
!! AAGTGATAAATGAATAAGAT+GGG + Chr6:49737912-49737931 MsG0680032790.01.T01:intron 20.0%
!! AATACTAAGATCATAAAAGA+TGG - Chr6:49744835-49744854 None:intergenic 20.0%
!! ACAATTGTAGTAATTGTTAT+AGG + Chr6:49740933-49740952 MsG0680032790.01.T01:intron 20.0%
!! AGTGTTTGTTTCAAATAATA+AGG - Chr6:49743075-49743094 None:intergenic 20.0%
!! AGTTGAAATTGTCATATAAT+TGG + Chr6:49745155-49745174 MsG0680032790.01.T01:intron 20.0%
!! CCAAAAAAAAATCAATTTGA+AGG - Chr6:49737302-49737321 None:intergenic 20.0%
!! CCAAATACAAGTATTTATAA+CGG - Chr6:49742693-49742712 None:intergenic 20.0%
!! CTACTATCATTAATTCATTA+TGG - Chr6:49738679-49738698 None:intergenic 20.0%
!! CTGAAGAAAAAAAAAATCAT+AGG - Chr6:49744331-49744350 None:intergenic 20.0%
!! GAAATAAATCAGTTTATAAC+AGG - Chr6:49740725-49740744 None:intergenic 20.0%
!! GAGATTTATATGGAATTTAA+GGG - Chr6:49742035-49742054 None:intergenic 20.0%
!! GATTTACCACTTAAAATATT+TGG - Chr6:49742375-49742394 None:intergenic 20.0%
!! TAAAAAAATTAGTGAAGTGA+AGG - Chr6:49747116-49747135 None:intergenic 20.0%
!! TATTTCCTTAAATCATTGAA+CGG + Chr6:49741229-49741248 MsG0680032790.01.T01:intron 20.0%
!! TCAATTATGTAGATGATATT+TGG - Chr6:49747548-49747567 None:intergenic 20.0%
!! TGAATATGAATTACAAACAT+TGG - Chr6:49739666-49739685 None:intergenic 20.0%
!! TGTAATCAATGTATTACTTA+AGG + Chr6:49741073-49741092 MsG0680032790.01.T01:intron 20.0%
!! TTAGAGAATATTAGTAAGTA+TGG + Chr6:49745523-49745542 MsG0680032790.01.T01:intron 20.0%
!! TTATTGGTATAGAAAGAATA+AGG + Chr6:49745016-49745035 MsG0680032790.01.T01:intron 20.0%
!! TTTAATATAAAACAAGCTAC+TGG - Chr6:49737030-49737049 None:intergenic 20.0%
!! TTTATTGGTATATGGTAAAA+TGG + Chr6:49744014-49744033 MsG0680032790.01.T01:intron 20.0%
!!! AAATATATGAATGCATTTTC+TGG + Chr6:49739010-49739029 MsG0680032790.01.T01:intron 20.0%
!!! AATTTGAAATTTCAAAACAG+GGG + Chr6:49742442-49742461 MsG0680032790.01.T01:intron 20.0%
!!! ATATTTCAAGAATTTTGCAA+AGG + Chr6:49742419-49742438 MsG0680032790.01.T01:intron 20.0%
!!! CAATCAAATGTGTTTTTATT+GGG - Chr6:49742299-49742318 None:intergenic 20.0%
!!! CCTTCAAATTGATTTTTTTT+TGG + Chr6:49737299-49737318 MsG0680032790.01.T01:intron 20.0%
!!! CTCTTTACTTGTTATATTTT+AGG + Chr6:49743936-49743955 MsG0680032790.01.T01:intron 20.0%
!!! GAATTTGAAATTTCAAAACA+GGG + Chr6:49742441-49742460 MsG0680032790.01.T01:intron 20.0%
!!! GCCGTTTATTTTTAAAAAAA+TGG + Chr6:49743849-49743868 MsG0680032790.01.T01:intron 20.0%
!!! GCTCTTTTTTTTTATGTTTT+TGG + Chr6:49744855-49744874 MsG0680032790.01.T01:intron 20.0%
!!! GGAAATATTGTTTTTTTTTG+TGG - Chr6:49743288-49743307 None:intergenic 20.0%
!!! GTTTTTTGAATGTTTAAACT+TGG + Chr6:49741685-49741704 MsG0680032790.01.T01:intron 20.0%
!!! TAGTTTTTTTAAACCTCAAA+TGG - Chr6:49744713-49744732 None:intergenic 20.0%
!!! TCAATTTTGTTTTGGTTTTT+GGG + Chr6:49738014-49738033 MsG0680032790.01.T01:intron 20.0%
!!! TTCAATTTTGTTTTGGTTTT+TGG + Chr6:49738013-49738032 MsG0680032790.01.T01:intron 20.0%
!!! TTGATAAATATTTTTGACAG+TGG - Chr6:49739156-49739175 None:intergenic 20.0%
!!! TTGATATGATAACATTTTAG+TGG + Chr6:49746524-49746543 MsG0680032790.01.T01:intron 20.0%
! AAAGATAGCAAACTTCAATT+AGG - Chr6:49746266-49746285 None:intergenic 25.0%
! AACAAACACAATAACATTGT+AGG - Chr6:49741338-49741357 None:intergenic 25.0%
! AACCATAAGTTTAGACTTTA+GGG + Chr6:49737989-49738008 MsG0680032790.01.T01:intron 25.0%
! AATGATTCATAGTGATGTTT+GGG - Chr6:49742873-49742892 None:intergenic 25.0%
! AATGTCCCTAAATATTTATG+GGG - Chr6:49742512-49742531 None:intergenic 25.0%
! ACTGCTATTATTATCATGTT+TGG + Chr6:49737256-49737275 MsG0680032790.01.T01:intron 25.0%
! AGAACTCAAATGAAAGATAA+AGG - Chr6:49737212-49737231 None:intergenic 25.0%
! AGCACCTTAATGTAAAAATT+AGG - Chr6:49736802-49736821 None:intergenic 25.0%
! ATAACATTGTAGGTAAAAGA+CGG - Chr6:49741328-49741347 None:intergenic 25.0%
! ATATGAAAGACTATTCAACT+TGG - Chr6:49737325-49737344 None:intergenic 25.0%
! ATCATAATGAAGTGAATACA+AGG + Chr6:49736850-49736869 MsG0680032790.01.T01:intron 25.0%
! ATGAATTATGAATCACTTTG+TGG + Chr6:49746983-49747002 MsG0680032790.01.T01:intron 25.0%
! ATGTCTAATAACCTAAAACT+TGG - Chr6:49745129-49745148 None:intergenic 25.0%
! ATTGCACTTACATTTAAAAG+AGG - Chr6:49747085-49747104 None:intergenic 25.0%
! CAATGTCCCTAAATATTTAT+GGG - Chr6:49742513-49742532 None:intergenic 25.0%
! CACCTTAATGTAAAAATTAG+GGG - Chr6:49736800-49736819 None:intergenic 25.0%
! CATTATGTTTGTTCCTAATT+GGG + Chr6:49741129-49741148 MsG0680032790.01.T01:intron 25.0%
! CCGTTATAAATACTTGTATT+TGG + Chr6:49742690-49742709 MsG0680032790.01.T01:intron 25.0%
! CTACAAAACTATAGAATCAT+TGG - Chr6:49738834-49738853 None:intergenic 25.0%
! CTATATTGTCAAAAGAAGAA+AGG - Chr6:49737356-49737375 None:intergenic 25.0%
! CTATCATTAATTCATTATGG+AGG - Chr6:49738676-49738695 None:intergenic 25.0%
! CTCAAATTCATAATAGCAAA+GGG - Chr6:49746101-49746120 None:intergenic 25.0%
! CTTATATGATAATTCACAAG+TGG + Chr6:49737085-49737104 MsG0680032790.01.T01:intron 25.0%
! CTTGTGAATTATCATATAAG+TGG - Chr6:49737085-49737104 None:intergenic 25.0%
! GAAACTTAAAAACAACTTAG+CGG + Chr6:49739497-49739516 MsG0680032790.01.T01:intron 25.0%
! GCACCTTAATGTAAAAATTA+GGG - Chr6:49736801-49736820 None:intergenic 25.0%
! GCTTTAATTAGACAAAACAA+AGG + Chr6:49738963-49738982 MsG0680032790.01.T01:intron 25.0%
! GGAGATTTATATGGAATTTA+AGG - Chr6:49742036-49742055 None:intergenic 25.0%
! GTACTTTATCCAACAAAAAA+TGG - Chr6:49742835-49742854 None:intergenic 25.0%
! TAAAAACACATTTGATTGCA+CGG + Chr6:49742301-49742320 MsG0680032790.01.T01:intron 25.0%
! TAAATCAGTTTATAACAGGT+AGG - Chr6:49740721-49740740 None:intergenic 25.0%
! TAAGAGAATGAAAAATTCTG+CGG - Chr6:49743197-49743216 None:intergenic 25.0%
! TAATAGTTCTTCTTACAATG+TGG + Chr6:49740695-49740714 MsG0680032790.01.T01:intron 25.0%
! TAATGATTCATAGTGATGTT+TGG - Chr6:49742874-49742893 None:intergenic 25.0%
! TACAAACAAGTGATACAATA+AGG - Chr6:49747600-49747619 None:intergenic 25.0%
! TAGAGAAATTACACAAACAA+AGG - Chr6:49744086-49744105 None:intergenic 25.0%
! TCAAATTCATAATAGCAAAG+GGG - Chr6:49746100-49746119 None:intergenic 25.0%
! TCACATTGAATGCAATTAAT+TGG + Chr6:49747261-49747280 MsG0680032790.01.T01:intron 25.0%
! TCATAATGAAGTGAATACAA+GGG + Chr6:49736851-49736870 MsG0680032790.01.T01:intron 25.0%
! TCTCTGTAATAAATAGCTAA+TGG + Chr6:49747295-49747314 MsG0680032790.01.T01:intron 25.0%
! TTACGAGAACTTATAGAAAT+AGG - Chr6:49738138-49738157 None:intergenic 25.0%
! TTAGAATTAGAAAGAGATGA+AGG + Chr6:49739871-49739890 MsG0680032790.01.T01:intron 25.0%
! TTATATATTGTTCCCATTTG+AGG + Chr6:49744683-49744702 MsG0680032790.01.T01:intron 25.0%
! TTATGTGATTGTAGAAAGAT+TGG + Chr6:49745985-49746004 MsG0680032790.01.T01:intron 25.0%
! TTCTAATTCCACAAAATGTT+AGG - Chr6:49740206-49740225 None:intergenic 25.0%
! TTGCACTTACATTTAAAAGA+GGG - Chr6:49747084-49747103 None:intergenic 25.0%
! TTTGTCAAAAATAACCACTA+TGG - Chr6:49747326-49747345 None:intergenic 25.0%
!! AACCCCTAATTTTTACATTA+AGG + Chr6:49736795-49736814 MsG0680032790.01.T01:intron 25.0%
!! AACTATGATTTTATCGTTTG+TGG + Chr6:49739548-49739567 MsG0680032790.01.T01:intron 25.0%
!! ACTTAAATTTTAAACTAGGG+TGG + Chr6:49743018-49743037 MsG0680032790.01.T01:intron 25.0%
!! AGTTTTTCTTGTAGTGTATT+AGG + Chr6:49742236-49742255 MsG0680032790.01.T01:intron 25.0%
!! ATATATTAGACAAAGTGTTC+GGG - Chr6:49744485-49744504 None:intergenic 25.0%
!! ATCACTTGATAATATTCTTG+AGG + Chr6:49740603-49740622 MsG0680032790.01.T01:intron 25.0%
!! ATTCTTGTTATGTTAGTTTG+TGG + Chr6:49740074-49740093 MsG0680032790.01.T01:intron 25.0%
!! ATTTCTCTACTTTCTGATTT+TGG + Chr6:49744097-49744116 MsG0680032790.01.T01:intron 25.0%
!! CTTTCTTCTTTTGACAATAT+AGG + Chr6:49737354-49737373 MsG0680032790.01.T01:intron 25.0%
!! GATATATTAGACAAAGTGTT+CGG - Chr6:49744486-49744505 None:intergenic 25.0%
!! GGAATTTGAAATTTCAAAAC+AGG + Chr6:49742440-49742459 MsG0680032790.01.T01:intron 25.0%
!! GTGTTAATTGCTATTCTTTA+AGG - Chr6:49746215-49746234 None:intergenic 25.0%
!! TATAACAAAGCCTAATTTTC+TGG - Chr6:49745618-49745637 None:intergenic 25.0%
!! TATAAGTCATTAGTTAGTCT+AGG - Chr6:49744668-49744687 None:intergenic 25.0%
!! TATTTTGCAAATAGATCTTG+TGG + Chr6:49747024-49747043 MsG0680032790.01.T01:intron 25.0%
!! TCACTTGATAATATTCTTGA+GGG + Chr6:49740604-49740623 MsG0680032790.01.T01:intron 25.0%
!! TCTTGTTCAATAAAAAGTGT+AGG + Chr6:49742985-49743004 MsG0680032790.01.T01:intron 25.0%
!! TTTCGATTTTATAGGTCATT+TGG + Chr6:49738447-49738466 MsG0680032790.01.T01:intron 25.0%
!! TTTGTGGATTTCGATTTTAT+AGG + Chr6:49738439-49738458 MsG0680032790.01.T01:intron 25.0%
!! TTTTGCTCATATATCACTTT+TGG + Chr6:49741465-49741484 MsG0680032790.01.T01:intron 25.0%
!! TTTTGTATCATAGCTTCTTT+AGG - Chr6:49741177-49741196 None:intergenic 25.0%
!!! ATCTTTGACTTATTTTTAGG+CGG + Chr6:49747445-49747464 MsG0680032790.01.T01:intron 25.0%
!!! ATTGTTTTGTACTTTAGTTC+TGG + Chr6:49744623-49744642 MsG0680032790.01.T01:intron 25.0%
!!! ATTTTAAGTGGTAAATCAGT+TGG + Chr6:49742378-49742397 MsG0680032790.01.T01:intron 25.0%
!!! GATTCTATAGTTTTGTAGAT+GGG + Chr6:49738836-49738855 MsG0680032790.01.T01:intron 25.0%
!!! GCAATCAAATGTGTTTTTAT+TGG - Chr6:49742300-49742319 None:intergenic 25.0%
!!! GGAAATTTTTTCCTTGAAAA+TGG - Chr6:49742640-49742659 None:intergenic 25.0%
!!! GTTTTAGTTAAGTTGATGTA+TGG + Chr6:49741723-49741742 MsG0680032790.01.T01:intron 25.0%
!!! GTTTTTTTTTGTGGAGAATT+GGG - Chr6:49743279-49743298 None:intergenic 25.0%
!!! TAATTGAAGTTTGCTATCTT+TGG + Chr6:49746265-49746284 MsG0680032790.01.T01:intron 25.0%
!!! TATGATAACATTTTAGTGGT+TGG + Chr6:49746528-49746547 MsG0680032790.01.T01:intron 25.0%
!!! TGATTCTATAGTTTTGTAGA+TGG + Chr6:49738835-49738854 MsG0680032790.01.T01:intron 25.0%
!!! TGTTTTTTTTTGTGGAGAAT+TGG - Chr6:49743280-49743299 None:intergenic 25.0%
!!! TTAGGGATTCAATTTTGTTT+TGG + Chr6:49738006-49738025 MsG0680032790.01.T01:intron 25.0%
!!! TTTTTCGTAAGGTATTTTGA+TGG + Chr6:49746376-49746395 MsG0680032790.01.T01:intron 25.0%
!!! TTTTTTTTTGTGGAGAATTG+GGG - Chr6:49743278-49743297 None:intergenic 25.0%
AAAAACACATTTGATTGCAC+GGG + Chr6:49742302-49742321 MsG0680032790.01.T01:intron 30.0%
AAAATGGTTTATCACCTTCA+CGG - Chr6:49742819-49742838 None:intergenic 30.0%
AAACTGAACTATGTATGCTA+GGG - Chr6:49740439-49740458 None:intergenic 30.0%
AACAATCCAAGAGATTCAAT+AGG - Chr6:49744281-49744300 None:intergenic 30.0%
AACATACACACAAAATTTGC+AGG - Chr6:49737483-49737502 None:intergenic 30.0%
AAGCTATATTGTAGGGTATA+TGG + Chr6:49738077-49738096 MsG0680032790.01.T01:intron 30.0%
AAGTTAATCTAAAAGGAACG+AGG + Chr6:49738198-49738217 MsG0680032790.01.T01:intron 30.0%
ACAAACTTACTTCAGTACAT+AGG - Chr6:49740812-49740831 None:intergenic 30.0%
AGCTATATTGTAGGGTATAT+GGG + Chr6:49738078-49738097 MsG0680032790.01.T01:intron 30.0%
ATAAAAGACCAAATGTTAGC+AGG - Chr6:49738873-49738892 None:intergenic 30.0%
ATAAACTAACTTCTATCGCA+TGG + Chr6:49737593-49737612 MsG0680032790.01.T01:intron 30.0%
ATAAGGATGACATTATGTGT+CGG - Chr6:49743058-49743077 None:intergenic 30.0%
ATATACCCTACAATATAGCT+TGG - Chr6:49738078-49738097 None:intergenic 30.0%
ATCCCTAAAGTCTAAACTTA+TGG - Chr6:49737994-49738013 None:intergenic 30.0%
ATGATCATACTAGACTTTGT+TGG - Chr6:49742796-49742815 None:intergenic 30.0%
ATGATTCATAGTGATGTTTG+GGG - Chr6:49742872-49742891 None:intergenic 30.0%
ATGGATCATGTTGTGATAAT+TGG - Chr6:49743329-49743348 None:intergenic 30.0%
ATTCCACAAAATGTTAGGTT+TGG - Chr6:49740201-49740220 None:intergenic 30.0%
ATTGCGACAGTTATTATTGA+AGG - Chr6:49743136-49743155 None:intergenic 30.0%
CAACCATAAGTTTAGACTTT+AGG + Chr6:49737988-49738007 MsG0680032790.01.T01:intron 30.0%
CAAGAGATTCAATAGGTAAT+AGG - Chr6:49744274-49744293 None:intergenic 30.0%
CATTCATAAAACTTCGCTTT+AGG - Chr6:49740335-49740354 None:intergenic 30.0%
CCAATGTCCCTAAATATTTA+TGG - Chr6:49742514-49742533 None:intergenic 30.0%
CCAATTAGGAACAAACATAA+TGG - Chr6:49741131-49741150 None:intergenic 30.0%
CCATAAATATTTAGGGACAT+TGG + Chr6:49742511-49742530 MsG0680032790.01.T01:intron 30.0%
CCATTATGTTTGTTCCTAAT+TGG + Chr6:49741128-49741147 MsG0680032790.01.T01:intron 30.0%
CCTCAAATTCATAATAGCAA+AGG - Chr6:49746102-49746121 None:intergenic 30.0%
CTATTACCTATTGAATCTCT+TGG + Chr6:49744272-49744291 MsG0680032790.01.T01:intron 30.0%
CTTGGATTGTTTGATGAAAA+TGG + Chr6:49744290-49744309 MsG0680032790.01.T01:intron 30.0%
GAAATGTACAGCTTATGTAT+AGG + Chr6:49738716-49738735 MsG0680032790.01.T01:intron 30.0%
GATGTAAATATGAGATCAAC+TGG - Chr6:49745359-49745378 None:intergenic 30.0%
GCACAATAATCCAGAAAATT+AGG + Chr6:49745605-49745624 MsG0680032790.01.T01:intron 30.0%
GTCTAATGTTTGTGATGTAA+GGG + Chr6:49739407-49739426 MsG0680032790.01.T01:intron 30.0%
GTTATACAAAGACAAGTGTA+AGG - Chr6:49740247-49740266 None:intergenic 30.0%
TAAAAGACCAAATGTTAGCA+GGG - Chr6:49738872-49738891 None:intergenic 30.0%
TAGACAAAACAAAGGCTTAA+TGG + Chr6:49738971-49738990 MsG0680032790.01.T01:intron 30.0%
TATTACTTAAGGCATATGCA+TGG + Chr6:49741084-49741103 MsG0680032790.01.T01:intron 30.0%
TCAAATGGATAACCTCAAAT+GGG - Chr6:49744698-49744717 None:intergenic 30.0%
TCTTCAACTCAATCGAAAAA+GGG + Chr6:49743774-49743793 MsG0680032790.01.T01:intron 30.0%
TCTTGCACTGAATAAAACAT+CGG - Chr6:49741291-49741310 None:intergenic 30.0%
TGAGAAGAAAGCTATCTATT+TGG - Chr6:49745912-49745931 None:intergenic 30.0%
TGATCATACTAGACTTTGTT+GGG - Chr6:49742795-49742814 None:intergenic 30.0%
TGGATCATGTTGTGATAATT+GGG - Chr6:49743328-49743347 None:intergenic 30.0%
TGTCACATTTGCATATTTGT+TGG + Chr6:49738753-49738772 MsG0680032790.01.T01:intron 30.0%
TGTCTAATGTTTGTGATGTA+AGG + Chr6:49739406-49739425 MsG0680032790.01.T01:intron 30.0%
TTATTCACAGCTTCTATTAC+TGG - Chr6:49745862-49745881 None:intergenic 30.0%
TTCAGATAACTTCATATGCA+TGG + Chr6:49740904-49740923 MsG0680032790.01.T01:intron 30.0%
TTCCACAAAATGTTAGGTTT+GGG - Chr6:49740200-49740219 None:intergenic 30.0%
TTCTTCAACTCAATCGAAAA+AGG + Chr6:49743773-49743792 MsG0680032790.01.T01:intron 30.0%
TTGATTACATTGTCTCCAAA+TGG - Chr6:49741062-49741081 None:intergenic 30.0%
TTGCGACAGTTATTATTGAA+GGG - Chr6:49743135-49743154 None:intergenic 30.0%
TTTACTGCTGTATATTTGTG+CGG + Chr6:49746790-49746809 MsG0680032790.01.T01:intron 30.0%
TTTCCGCATGGAAAAAAAAA+AGG - Chr6:49737514-49737533 None:intergenic 30.0%
TTTGTATTGGATACTTGGTT+TGG - Chr6:49746630-49746649 None:intergenic 30.0%
! AAACAAAGGCTTAATGGTTT+TGG + Chr6:49738977-49738996 MsG0680032790.01.T01:intron 30.0%
! AACAAAATGGATTTCAGAGA+GGG - Chr6:49742582-49742601 None:intergenic 30.0%
! AAGTAAACTTGTCTCTGAAA+AGG + Chr6:49746314-49746333 MsG0680032790.01.T01:intron 30.0%
! AATGAGAAGAATTTGTTCAC+AGG + Chr6:49745260-49745279 MsG0680032790.01.T01:CDS 30.0%
! AGCAGAAACATGTTTTGTAT+TGG - Chr6:49746643-49746662 None:intergenic 30.0%
! AGTCTGAAACAAAATGTAGT+AGG - Chr6:49744433-49744452 None:intergenic 30.0%
! ATGCCTGATTTTATATTCCT+CGG + Chr6:49740352-49740371 MsG0680032790.01.T01:intron 30.0%
! CAAGAGGATCATTTATTTCT+AGG + Chr6:49746037-49746056 MsG0680032790.01.T01:intron 30.0%
! CATGTTTTGTATTGGATACT+TGG - Chr6:49746635-49746654 None:intergenic 30.0%
! GATAAAGTACTTGTCAGATT+AGG + Chr6:49742845-49742864 MsG0680032790.01.T01:intron 30.0%
! TAACAAAATGGATTTCAGAG+AGG - Chr6:49742583-49742602 None:intergenic 30.0%
! TCATCTCTCTTTTCTCTTAA+AGG + Chr6:49740743-49740762 MsG0680032790.01.T01:intron 30.0%
! TGAAGTAAGTTTGTTTCACA+CGG + Chr6:49740818-49740837 MsG0680032790.01.T01:intron 30.0%
! TTGAGCATTGTGAAAATGAA+CGG + Chr6:49744734-49744753 MsG0680032790.01.T01:intron 30.0%
!! ACTTGTATTTGGTGTTAAAC+AGG + Chr6:49742701-49742720 MsG0680032790.01.T01:intron 30.0%
!! CCTTTGCTATTATGAATTTG+AGG + Chr6:49746099-49746118 MsG0680032790.01.T01:intron 30.0%
!! CTAACATTTGGTCTTTTATG+TGG + Chr6:49738874-49738893 MsG0680032790.01.T01:intron 30.0%
!! CTTGTATTTGGTGTTAAACA+GGG + Chr6:49742702-49742721 MsG0680032790.01.T01:intron 30.0%
!! GACTTGTTTGGTGTAAATTA+AGG + Chr6:49738326-49738345 MsG0680032790.01.T01:intron 30.0%
!! GCTTTAGTTCAAATTGCTTT+TGG + Chr6:49736917-49736936 MsG0680032790.01.T01:intron 30.0%
!! GTGCATCCAAATATTTTAAG+TGG + Chr6:49742366-49742385 MsG0680032790.01.T01:intron 30.0%
!! GTTTATCCGTTATTGCTTTT+TGG + Chr6:49740857-49740876 MsG0680032790.01.T01:intron 30.0%
!! TACTAACTTGTTACTTTGTG+TGG + Chr6:49739800-49739819 MsG0680032790.01.T01:intron 30.0%
!! TGTTGGTCTTTATTGGTATA+TGG + Chr6:49744006-49744025 MsG0680032790.01.T01:intron 30.0%
!! TTGTTTTGTGCATTTTGCAT+AGG + Chr6:49738287-49738306 MsG0680032790.01.T01:intron 30.0%
!! TTTCTGGTTTAGGTGTATAT+AGG + Chr6:49739026-49739045 MsG0680032790.01.T01:intron 30.0%
!!! AGTTCTAAGTTTTGTGCAAT+TGG + Chr6:49744908-49744927 MsG0680032790.01.T01:intron 30.0%
!!! ATGAATGCATTTTCTGGTTT+AGG + Chr6:49739016-49739035 MsG0680032790.01.T01:intron 30.0%
!!! ATTTTAAAACGACCATTCCA+GGG - Chr6:49744590-49744609 None:intergenic 30.0%
!!! CGATGAACTTCCATTTTTTA+AGG + Chr6:49743563-49743582 MsG0680032790.01.T01:intron 30.0%
!!! CTCTGAAATCCATTTTGTTA+GGG + Chr6:49742583-49742602 MsG0680032790.01.T01:intron 30.0%
!!! GGTGATAAACCATTTTTTGT+TGG + Chr6:49742823-49742842 MsG0680032790.01.T01:intron 30.0%
!!! TATTTTAAAACGACCATTCC+AGG - Chr6:49744591-49744610 None:intergenic 30.0%
!!! TCTCTGAAATCCATTTTGTT+AGG + Chr6:49742582-49742601 MsG0680032790.01.T01:intron 30.0%
!!! TTTTCTCCTGTTTTTTTTGC+TGG + Chr6:49739995-49740014 MsG0680032790.01.T01:intron 30.0%
!!! TTTTGTGTTGTTTGCACATA+CGG + Chr6:49738920-49738939 MsG0680032790.01.T01:intron 30.0%
!!! TTTTTTTTCCATGCGGAAAT+GGG + Chr6:49737515-49737534 MsG0680032790.01.T01:intron 30.0%
!!! TTTTTTTTTCCATGCGGAAA+TGG + Chr6:49737514-49737533 MsG0680032790.01.T01:intron 30.0%
AAAACACATTTGATTGCACG+GGG + Chr6:49742303-49742322 MsG0680032790.01.T01:intron 35.0%
AAAACCGAAACACTAGTGAT+TGG - Chr6:49741670-49741689 None:intergenic 35.0%
AAAATGGAAGTTCATCGAAG+AGG - Chr6:49743560-49743579 None:intergenic 35.0%
AAACAGAGCATAGCATTCTT+TGG + Chr6:49747484-49747503 MsG0680032790.01.T01:three_prime_UTR 35.0%
AAAGAATGCTATGCTCTGTT+TGG - Chr6:49747485-49747504 None:intergenic 35.0%
AACACTGAAAGAAGAGAAGA+GGG + Chr6:49738786-49738805 MsG0680032790.01.T01:intron 35.0%
AACAGACCAGCAAAAAAAAC+AGG - Chr6:49740004-49740023 None:intergenic 35.0%
ACACTCCGTTCAATGATTTA+AGG - Chr6:49741237-49741256 None:intergenic 35.0%
ACGTACCATGATCACAATAT+TGG + Chr6:49744809-49744828 MsG0680032790.01.T01:intron 35.0%
ACTCTCCAAGCTATATTGTA+GGG + Chr6:49738070-49738089 MsG0680032790.01.T01:intron 35.0%
ACTCTCTCTTTCGCAATTTA+TGG + Chr6:49737817-49737836 MsG0680032790.01.T01:intron 35.0%
AGAAAGATTGGATTATGTGC+AGG + Chr6:49745997-49746016 MsG0680032790.01.T01:intron 35.0%
AGCAATCAAAACAAGGCAAT+AGG - Chr6:49746914-49746933 None:intergenic 35.0%
AGCAGTGAAAATTCGTTATC+TGG - Chr6:49745075-49745094 None:intergenic 35.0%
AGCTAATGGTTATTCCATAG+TGG + Chr6:49747309-49747328 MsG0680032790.01.T01:intron 35.0%
ATAACCTGCAATTTAGACAG+TGG - Chr6:49737170-49737189 None:intergenic 35.0%
ATATGATTCTCCAAAAGCTG+AGG - Chr6:49741614-49741633 None:intergenic 35.0%
ATGATTGTTGTGTTCTAGTG+TGG + Chr6:49746455-49746474 MsG0680032790.01.T01:CDS 35.0%
ATGCCGAGGAATATAAAATC+AGG - Chr6:49740358-49740377 None:intergenic 35.0%
ATGTATTGTTGTGTGACCAA+AGG - Chr6:49746938-49746957 None:intergenic 35.0%
CACAATAGCAAAACCAGAAA+TGG - Chr6:49744559-49744578 None:intergenic 35.0%
CATTTCTTCACTTGAATGTG+AGG - Chr6:49742965-49742984 None:intergenic 35.0%
CCTCACCCCATAAATATTTA+GGG + Chr6:49742504-49742523 MsG0680032790.01.T01:intron 35.0%
CGCAAATGAGGAGATTTATA+TGG - Chr6:49742045-49742064 None:intergenic 35.0%
CTAATGACTATAATGCACTC+TGG + Chr6:49737423-49737442 MsG0680032790.01.T01:intron 35.0%
CTCAAATGGATAACCTCAAA+TGG - Chr6:49744699-49744718 None:intergenic 35.0%
CTTAACAAATATCCACAGAG+AGG + Chr6:49743213-49743232 MsG0680032790.01.T01:intron 35.0%
GAAACTGAACTATGTATGCT+AGG - Chr6:49740440-49740459 None:intergenic 35.0%
GAAGCTGTGAATAATGTCAT+TGG + Chr6:49745868-49745887 MsG0680032790.01.T01:intron 35.0%
GAATGTTGCAATGGAAATTC+TGG + Chr6:49746423-49746442 MsG0680032790.01.T01:CDS 35.0%
GAGAATTGGGGATTTAGAAA+GGG - Chr6:49743266-49743285 None:intergenic 35.0%
GAGCATCCAAAAAGCAATAA+CGG - Chr6:49740866-49740885 None:intergenic 35.0%
GATGTATCACTTAGCAAGAA+GGG + Chr6:49745290-49745309 MsG0680032790.01.T01:CDS 35.0%
GGATCATGTTGTGATAATTG+GGG - Chr6:49743327-49743346 None:intergenic 35.0%
GGTATTCACGTTCTCAAAAA+AGG - Chr6:49742278-49742297 None:intergenic 35.0%
GTTAACTCACCCTAACAAAA+TGG - Chr6:49742595-49742614 None:intergenic 35.0%
GTTCAGCATTCAATCTATTG+TGG - Chr6:49737452-49737471 None:intergenic 35.0%
TAAATCATTGAACGGAGTGT+TGG + Chr6:49741237-49741256 MsG0680032790.01.T01:intron 35.0%
TAACACTGAAAGAAGAGAAG+AGG + Chr6:49738785-49738804 MsG0680032790.01.T01:intron 35.0%
TAATTCATGTTCACCACTCT+CGG - Chr6:49746971-49746990 None:intergenic 35.0%
TATATGAGCAAAACCAAACG+TGG - Chr6:49741458-49741477 None:intergenic 35.0%
TATGTAGATGATATTTGGCG+AGG - Chr6:49747543-49747562 None:intergenic 35.0%
TCCACAAAATGTTAGGTTTG+GGG - Chr6:49740199-49740218 None:intergenic 35.0%
TGATGTATCACTTAGCAAGA+AGG + Chr6:49745289-49745308 MsG0680032790.01.T01:CDS 35.0%
TGATTCATAGTGATGTTTGG+GGG - Chr6:49742871-49742890 None:intergenic 35.0%
TGCGTATATAGTCAAGTGTA+TGG + Chr6:49739346-49739365 MsG0680032790.01.T01:intron 35.0%
TGTATTGTTGTGTGACCAAA+GGG - Chr6:49746937-49746956 None:intergenic 35.0%
TTACCTTGAGAGAGTTGAAT+AGG - Chr6:49744974-49744993 None:intergenic 35.0%
TTATTGGAGTCATTAGAGGA+TGG + Chr6:49740774-49740793 MsG0680032790.01.T01:intron 35.0%
TTGAAATCTGCACTAGACAT+TGG - Chr6:49739640-49739659 None:intergenic 35.0%
TTGTCCAATCACTAGTGTTT+CGG + Chr6:49741663-49741682 MsG0680032790.01.T01:intron 35.0%
TTGTTTCAATGATCAGGCAT+GGG + Chr6:49741507-49741526 MsG0680032790.01.T01:intron 35.0%
TTTAAAAGAGGGTGACTACA+AGG - Chr6:49747073-49747092 None:intergenic 35.0%
TTTATGTGTCTAACTGCCAA+TGG + Chr6:49746401-49746420 MsG0680032790.01.T01:CDS 35.0%
TTTCCATTGCAACATTCCAT+TGG - Chr6:49746420-49746439 None:intergenic 35.0%
! ATGGCACTGAATTTGAGTAA+TGG + Chr6:49744033-49744052 MsG0680032790.01.T01:intron 35.0%
! CATTTGAGGTTATCCATTTG+AGG + Chr6:49744697-49744716 MsG0680032790.01.T01:intron 35.0%
! CTTGATAATATTCTTGAGGG+TGG + Chr6:49740607-49740626 MsG0680032790.01.T01:intron 35.0%
! GACAAGTTTACTTGATGACA+AGG - Chr6:49746307-49746326 None:intergenic 35.0%
! GATGCACAATTCCATTTTCA+AGG + Chr6:49742626-49742645 MsG0680032790.01.T01:intron 35.0%
! GGAGAAAATTGAGTACCTTT+TGG + Chr6:49738347-49738366 MsG0680032790.01.T01:intron 35.0%
! TGCTTGCAATTCAGTTTGTT+AGG + Chr6:49744373-49744392 MsG0680032790.01.T01:intron 35.0%
! TTATCGCGTTTTTCACCATT+TGG + Chr6:49741044-49741063 MsG0680032790.01.T01:intron 35.0%
! TTATGTGTTTCCTCAGCTTT+TGG + Chr6:49741601-49741620 MsG0680032790.01.T01:intron 35.0%
! TTGGACAAGTTGACTATTCT+CGG - Chr6:49741651-49741670 None:intergenic 35.0%
!! AAATGTTAGGTTTGGGGTTT+TGG - Chr6:49740193-49740212 None:intergenic 35.0%
!! AATGTTAGGTTTGGGGTTTT+GGG - Chr6:49740192-49740211 None:intergenic 35.0%
!! ACAAGGAGATTTTGAGTGTT+AGG - Chr6:49743243-49743262 None:intergenic 35.0%
!! AGACTGGTGTTTTGAATGAA+AGG + Chr6:49747221-49747240 MsG0680032790.01.T01:three_prime_UTR 35.0%
!! GACTGGTGTTTTGAATGAAA+GGG + Chr6:49747222-49747241 MsG0680032790.01.T01:three_prime_UTR 35.0%
!! GATGTTTGTTGTTGCAATGT+TGG + Chr6:49743989-49744008 MsG0680032790.01.T01:intron 35.0%
!! GTGCAATTGGATTTTGCTAT+CGG + Chr6:49743732-49743751 MsG0680032790.01.T01:intron 35.0%
!! GTTGCAATGTTGGTCTTTAT+TGG + Chr6:49743999-49744018 MsG0680032790.01.T01:intron 35.0%
!!! CATATATCACTTTTGGTGTC+CGG + Chr6:49741472-49741491 MsG0680032790.01.T01:intron 35.0%
!!! CTATAGTTTTGTAGATGGGA+TGG + Chr6:49738840-49738859 MsG0680032790.01.T01:intron 35.0%
!!! GTCTGTTTTCTTGTTGTTTG+CGG + Chr6:49746812-49746831 MsG0680032790.01.T01:intron 35.0%
!!! GTGCCTTTTTTTTTTCCATG+CGG + Chr6:49737508-49737527 MsG0680032790.01.T01:intron 35.0%
!!! TGGAGAGTTTTGGCTTTATT+TGG + Chr6:49737546-49737565 MsG0680032790.01.T01:intron 35.0%
AAATCGGCACTTTCTTGAAG+TGG - Chr6:49742558-49742577 None:intergenic 40.0%
AATTCATGTTCACCACTCTC+GGG - Chr6:49746970-49746989 None:intergenic 40.0%
ACAACTGCTACAGCATATCA+TGG - Chr6:49737962-49737981 None:intergenic 40.0%
ACAACTTCATGCACCATTTC+TGG + Chr6:49744543-49744562 MsG0680032790.01.T01:intron 40.0%
ACACTTGCCATCTTGAATCT+TGG - Chr6:49740473-49740492 None:intergenic 40.0%
AGAAATGGTGCATGAAGTTG+TGG - Chr6:49744544-49744563 None:intergenic 40.0%
AGACGCTTGTTTCAATGATC+AGG + Chr6:49741501-49741520 MsG0680032790.01.T01:intron 40.0%
AGCAGTCACACAAAAATGCA+TGG - Chr6:49737242-49737261 None:intergenic 40.0%
AGCTTGGAATGATGAACAAG+AGG + Chr6:49746021-49746040 MsG0680032790.01.T01:intron 40.0%
AGTCTGCTGTATTTGCATTG+CGG + Chr6:49739376-49739395 MsG0680032790.01.T01:intron 40.0%
AGTGAAACCTGATCCCAATT+AGG - Chr6:49741145-49741164 None:intergenic 40.0%
AGTGCAGCGAATTATGTTAC+TGG + Chr6:49744229-49744248 MsG0680032790.01.T01:intron 40.0%
ATAGATGAGGCAATTGAAGC+TGG + Chr6:49745314-49745333 MsG0680032790.01.T01:CDS 40.0%
ATCACTTTGTGGAGCTTTCT+TGG + Chr6:49746994-49747013 MsG0680032790.01.T01:intron 40.0%
ATCGAAATCCACAAACCTGA+AGG - Chr6:49738434-49738453 None:intergenic 40.0%
ATGCTGCAGAAAACAAAGAC+AGG - Chr6:49746238-49746257 None:intergenic 40.0%
ATGGCTAAGTATGGCAAAGT+GGG + Chr6:49737612-49737631 MsG0680032790.01.T01:intron 40.0%
ATTGTGATTCTAGACCTCAG+TGG - Chr6:49737640-49737659 None:intergenic 40.0%
CAAAGCCATGTTATGCAGTT+AGG + Chr6:49736678-49736697 MsG0680032790.01.T01:CDS 40.0%
CAAAGGGAGCAATCAAAACA+AGG - Chr6:49746921-49746940 None:intergenic 40.0%
CAAGAAACAACATTCTCACG+CGG + Chr6:49741406-49741425 MsG0680032790.01.T01:intron 40.0%
CAATTTAGACAGTGGCGTAA+AGG - Chr6:49737162-49737181 None:intergenic 40.0%
CACTCTCCAAGCTATATTGT+AGG + Chr6:49738069-49738088 MsG0680032790.01.T01:intron 40.0%
CAGTTGGAACTGAAGCAATT+GGG + Chr6:49742394-49742413 MsG0680032790.01.T01:intron 40.0%
CATTAGAATCTGACACTGCA+GGG - Chr6:49737712-49737731 None:intergenic 40.0%
CCCTAAATATTTATGGGGTG+AGG - Chr6:49742507-49742526 None:intergenic 40.0%
CGTTCTCAGTTATGTGCAAT+TGG + Chr6:49743719-49743738 MsG0680032790.01.T01:intron 40.0%
CTCAGCCAATGAAAGTTAGT+GGG + Chr6:49737126-49737145 MsG0680032790.01.T01:intron 40.0%
CTCTCGTTGTGCATAACAAT+AGG - Chr6:49745707-49745726 None:intergenic 40.0%
CTTAAAGGATGCGTGCTTAT+TGG + Chr6:49740758-49740777 MsG0680032790.01.T01:intron 40.0%
CTTGTGGAAAGGAAAATCTG+AGG - Chr6:49742768-49742787 None:intergenic 40.0%
CTTGTTTCAATGATCAGGCA+TGG + Chr6:49741506-49741525 MsG0680032790.01.T01:intron 40.0%
GAACCCTCCAAATTTAGTGA+AGG - Chr6:49747149-49747168 None:intergenic 40.0%
GACTTTGTTGGGTATACTTG+TGG - Chr6:49742784-49742803 None:intergenic 40.0%
GAGAGTTAAACTTTCGCGAA+AGG - Chr6:49737778-49737797 None:intergenic 40.0%
GATGAGATCAGTGTCTACAA+TGG + Chr6:49738469-49738488 MsG0680032790.01.T01:intron 40.0%
GATGGCCAATATTGTGATCA+TGG - Chr6:49744817-49744836 None:intergenic 40.0%
GCCTCACCCCATAAATATTT+AGG + Chr6:49742503-49742522 MsG0680032790.01.T01:intron 40.0%
GCTTTGATCCTTATTCGACA+CGG + Chr6:49745224-49745243 MsG0680032790.01.T01:CDS 40.0%
GGAGAAAAGTAACAGTCTAG+CGG - Chr6:49739983-49740002 None:intergenic 40.0%
GGAGAATTGGGGATTTAGAA+AGG - Chr6:49743267-49743286 None:intergenic 40.0%
GGATTTCAGAGAGGGAAAAT+CGG - Chr6:49742574-49742593 None:intergenic 40.0%
GGCTGAGCTCTATAAATAAG+AGG - Chr6:49737113-49737132 None:intergenic 40.0%
GGTACCAAATTCAAGTGCTT+TGG - Chr6:49744182-49744201 None:intergenic 40.0%
GTAACATAATTCGCTGCACT+AGG - Chr6:49744229-49744248 None:intergenic 40.0%
GTGCTTATTGGAGTCATTAG+AGG + Chr6:49740770-49740789 MsG0680032790.01.T01:intron 40.0%
GTGTTTGATGCTGCATATTG+AGG + Chr6:49739077-49739096 MsG0680032790.01.T01:intron 40.0%
GTTCAAAAACACAAGCTTCG+TGG - Chr6:49742339-49742358 None:intergenic 40.0%
GTTTGTTCCTAATTGGGATC+AGG + Chr6:49741135-49741154 MsG0680032790.01.T01:intron 40.0%
TATCTATAATCGATCCCGAC+TGG + Chr6:49740285-49740304 MsG0680032790.01.T01:intron 40.0%
TCAAAACAGGGGATGACATA+CGG + Chr6:49742453-49742472 MsG0680032790.01.T01:intron 40.0%
TCAACTCAATCGAAAAAGGG+AGG + Chr6:49743777-49743796 MsG0680032790.01.T01:intron 40.0%
TCACACAACAATACATGCTG+AGG + Chr6:49746942-49746961 MsG0680032790.01.T01:intron 40.0%
TCAGTTGGAACTGAAGCAAT+TGG + Chr6:49742393-49742412 MsG0680032790.01.T01:intron 40.0%
TCATTCTCGCTACCTTCTTA+CGG - Chr6:49745433-49745452 None:intergenic 40.0%
TCTAGTATGATCATCCGTGA+AGG + Chr6:49742802-49742821 MsG0680032790.01.T01:intron 40.0%
TCTCCTATTCAACTCTCTCA+AGG + Chr6:49744968-49744987 MsG0680032790.01.T01:intron 40.0%
TGAAGCAATAGCTTAAGCAG+TGG - Chr6:49743503-49743522 None:intergenic 40.0%
TGATATGCTGTAGCAGTTGT+TGG + Chr6:49737962-49737981 MsG0680032790.01.T01:intron 40.0%
TGATTCCACTTAGTGGGATA+AGG + Chr6:49738584-49738603 MsG0680032790.01.T01:intron 40.0%
TGCTGCAGAAAACAAAGACA+GGG - Chr6:49746237-49746256 None:intergenic 40.0%
TGTTGGGTATACTTGTGGAA+AGG - Chr6:49742779-49742798 None:intergenic 40.0%
TTCTAACGTACTTGATGCGT+AGG - Chr6:49739206-49739225 None:intergenic 40.0%
TTCTATCGCATGGCTAAGTA+TGG + Chr6:49737603-49737622 MsG0680032790.01.T01:intron 40.0%
TTGAGTTCAAGCAAAACTCC+AGG - Chr6:49747202-49747221 None:intergenic 40.0%
TTTCTGTTCCAACTCAGATG+AGG + Chr6:49745199-49745218 MsG0680032790.01.T01:intron 40.0%
! AAAAGCCTTATCCCACTAAG+TGG - Chr6:49738592-49738611 None:intergenic 40.0%
! AAACGGCGAAAAGTGTAAGA+TGG - Chr6:49743836-49743855 None:intergenic 40.0%
! AACAGTTCAGCAAACTTGCT+TGG - Chr6:49739267-49739286 None:intergenic 40.0%
! ACATTATGTGTCGGCATCTT+AGG - Chr6:49743049-49743068 None:intergenic 40.0%
! ACCCCAAACCTAACATTTTG+TGG + Chr6:49740195-49740214 MsG0680032790.01.T01:intron 40.0%
! GAGAATTGAAGTGCTAACGA+CGG - Chr6:49744952-49744971 None:intergenic 40.0%
! GATGCCAAAGCACTTGAATT+TGG + Chr6:49744175-49744194 MsG0680032790.01.T01:intron 40.0%
! GCTTCTCTGCTTTAGACAAT+AGG + Chr6:49740388-49740407 MsG0680032790.01.T01:intron 40.0%
! GTTTTCGCCAAGATTCAAGA+TGG + Chr6:49740463-49740482 MsG0680032790.01.T01:intron 40.0%
! GTTTTGCTTGAACTCAAGAC+TGG + Chr6:49747205-49747224 MsG0680032790.01.T01:three_prime_UTR 40.0%
! TAGCAAGAAGGGTATAGATG+AGG + Chr6:49745301-49745320 MsG0680032790.01.T01:CDS 40.0%
! TGGAAAGGAAAATCTGAGGT+AGG - Chr6:49742764-49742783 None:intergenic 40.0%
! TGTAGCTGATTCCACTTAGT+GGG + Chr6:49738578-49738597 MsG0680032790.01.T01:intron 40.0%
! TTGTAGCTGATTCCACTTAG+TGG + Chr6:49738577-49738596 MsG0680032790.01.T01:intron 40.0%
! TTTTGAGCTCTCTGTTGTAG+AGG + Chr6:49746858-49746877 MsG0680032790.01.T01:intron 40.0%
!! AATGTTGTTTCTTGGAGAGG+AGG - Chr6:49741400-49741419 None:intergenic 40.0%
!! ATGTTAGGTTTGGGGTTTTG+GGG - Chr6:49740191-49740210 None:intergenic 40.0%
!! GAGAATGTTGTTTCTTGGAG+AGG - Chr6:49741403-49741422 None:intergenic 40.0%
!! TTAACCATTAACTTGCCTGC+AGG + Chr6:49745679-49745698 MsG0680032790.01.T01:intron 40.0%
!!! CAAAGGCTTAATGGTTTTGG+TGG + Chr6:49738980-49738999 MsG0680032790.01.T01:intron 40.0%
!!! CTTGTTTTGATTGCTCCCTT+TGG + Chr6:49746919-49746938 MsG0680032790.01.T01:intron 40.0%
AAACTCCAGGTACTCCAGTA+TGG - Chr6:49747189-49747208 None:intergenic 45.0%
AAGCTGAACTATGTATGCCG+AGG - Chr6:49740372-49740391 None:intergenic 45.0%
AAGTTCATCGAAGAGGATGG+TGG - Chr6:49743553-49743572 None:intergenic 45.0%
AATTTGGAGGGTTCAGATGC+TGG + Chr6:49747155-49747174 MsG0680032790.01.T01:intron 45.0%
ACACGGTTGCTTGCATTTCT+TGG + Chr6:49740835-49740854 MsG0680032790.01.T01:intron 45.0%
ACCCCAACAAATGTGACTGT+TGG + Chr6:49742141-49742160 MsG0680032790.01.T01:intron 45.0%
ACCTAAATCAACTGCCTGAG+TGG + Chr6:49740308-49740327 MsG0680032790.01.T01:intron 45.0%
ACGCACCCACTAACTTTCAT+TGG - Chr6:49737134-49737153 None:intergenic 45.0%
AGAGGGACGATGATAAGCTA+TGG - Chr6:49743348-49743367 None:intergenic 45.0%
AGAGTGAACAAGCAAAGGCA+TGG + Chr6:49745723-49745742 MsG0680032790.01.T01:CDS 45.0%
AGATTGAGGCTCTCGATTAG+AGG - Chr6:49743457-49743476 None:intergenic 45.0%
AGGTAGATCTAGTGACGCAA+AGG - Chr6:49743437-49743456 None:intergenic 45.0%
AGTGGTAGGCTTGGATACTT+TGG + Chr6:49740642-49740661 MsG0680032790.01.T01:intron 45.0%
AGTTGCCAAGCTGCTATTAC+TGG - Chr6:49745787-49745806 None:intergenic 45.0%
ATGTTATGCAGTTAGGACCG+AGG + Chr6:49736685-49736704 MsG0680032790.01.T01:CDS 45.0%
CAACGAGAGTGAACAAGCAA+AGG + Chr6:49745718-49745737 MsG0680032790.01.T01:CDS 45.0%
CAACTCCACTTGTCTCCAAA+AGG - Chr6:49738365-49738384 None:intergenic 45.0%
CATAGGATAAGCAGCTGAAG+AGG + Chr6:49738304-49738323 MsG0680032790.01.T01:intron 45.0%
CATGGCTAAGTATGGCAAAG+TGG + Chr6:49737611-49737630 MsG0680032790.01.T01:intron 45.0%
CCAAGCTGCTATTACTGGAA+TGG - Chr6:49745782-49745801 None:intergenic 45.0%
CCATTCCAGTAATAGCAGCT+TGG + Chr6:49745779-49745798 MsG0680032790.01.T01:intron 45.0%
CCCAACAAATGTGACTGTTG+GGG + Chr6:49742143-49742162 MsG0680032790.01.T01:intron 45.0%
CCCCAACAAATGTGACTGTT+GGG + Chr6:49742142-49742161 MsG0680032790.01.T01:intron 45.0%
CCCCAACAGTCACATTTGTT+GGG - Chr6:49742146-49742165 None:intergenic 45.0%
CGCAACTTAGTATCTTGCAC+CGG + Chr6:49736887-49736906 MsG0680032790.01.T01:intron 45.0%
CGCTGTGATATATCCACGTT+TGG + Chr6:49741442-49741461 MsG0680032790.01.T01:intron 45.0%
CGTGTTGTCTCTATCAGACT+TGG + Chr6:49746881-49746900 MsG0680032790.01.T01:intron 45.0%
CTATTGCTTCAATCCACCGT+CGG + Chr6:49743512-49743531 MsG0680032790.01.T01:intron 45.0%
CTGCCAATGGAATGTTGCAA+TGG + Chr6:49746414-49746433 MsG0680032790.01.T01:CDS 45.0%
CTTAAGCAGTGGTTAACCGA+GGG - Chr6:49743492-49743511 None:intergenic 45.0%
CTTCTCAAGAGACAGCAAGA+AGG + Chr6:49745925-49745944 MsG0680032790.01.T01:intron 45.0%
GAATTTGGTACCCGCGAATT+GGG + Chr6:49744190-49744209 MsG0680032790.01.T01:intron 45.0%
GAGACAAGTGGAGTTGTTAG+TGG + Chr6:49738369-49738388 MsG0680032790.01.T01:CDS 45.0%
GAGATGTCCCTGCTAACATT+TGG + Chr6:49738862-49738881 MsG0680032790.01.T01:intron 45.0%
GCATTAGAATCTGACACTGC+AGG - Chr6:49737713-49737732 None:intergenic 45.0%
GCTCAGCCAATGAAAGTTAG+TGG + Chr6:49737125-49737144 MsG0680032790.01.T01:intron 45.0%
GCTGATTGCGACTGTTAGAA+GGG - Chr6:49742194-49742213 None:intergenic 45.0%
GTCTGCTGTATTTGCATTGC+GGG + Chr6:49739377-49739396 MsG0680032790.01.T01:intron 45.0%
GTGAACGAACAGTTAACCGA+CGG - Chr6:49743531-49743550 None:intergenic 45.0%
GTTGCTAACAGTCGCAAATG+AGG - Chr6:49742057-49742076 None:intergenic 45.0%
GTTGTCTCTATCAGACTTGG+CGG + Chr6:49746884-49746903 MsG0680032790.01.T01:intron 45.0%
TACGCCACTGTCTAAATTGC+AGG + Chr6:49737163-49737182 MsG0680032790.01.T01:intron 45.0%
TAGTGACGCAAAGGACAAGA+GGG - Chr6:49743428-49743447 None:intergenic 45.0%
TCCCCAACAGTCACATTTGT+TGG - Chr6:49742147-49742166 None:intergenic 45.0%
TCGGTCCTAACTGCATAACA+TGG - Chr6:49736686-49736705 None:intergenic 45.0%
TGAATTTGGTACCCGCGAAT+TGG + Chr6:49744189-49744208 MsG0680032790.01.T01:intron 45.0%
TGGAAGTTCATCGAAGAGGA+TGG - Chr6:49743556-49743575 None:intergenic 45.0%
TGGATTATGTGCAGGTAGCT+TGG + Chr6:49746005-49746024 MsG0680032790.01.T01:intron 45.0%
TGGGGATTTAGAAAGGGACA+AGG - Chr6:49743260-49743279 None:intergenic 45.0%
TTGTCTCTATCAGACTTGGC+GGG + Chr6:49746885-49746904 MsG0680032790.01.T01:intron 45.0%
! AACAGTTCTTGCGACCCTTT+TGG + Chr6:49743165-49743184 MsG0680032790.01.T01:intron 45.0%
! AATGAAAGTTAGTGGGTGCG+TGG + Chr6:49737133-49737152 MsG0680032790.01.T01:intron 45.0%
! ATGAAAGTTAGTGGGTGCGT+GGG + Chr6:49737134-49737153 MsG0680032790.01.T01:intron 45.0%
! ATGTGTCGGCATCTTAGGTT+AGG - Chr6:49743044-49743063 None:intergenic 45.0%
! CAGTCACAGCTCCAAGTTTT+AGG + Chr6:49745115-49745134 MsG0680032790.01.T01:intron 45.0%
! CAGTTGATTTAGGTCCAGTC+GGG - Chr6:49740302-49740321 None:intergenic 45.0%
! CCCAACAGTCACATTTGTTG+GGG - Chr6:49742145-49742164 None:intergenic 45.0%
! GCAGTTGATTTAGGTCCAGT+CGG - Chr6:49740303-49740322 None:intergenic 45.0%
! GGAAGAAGGTTGGAGAGTTT+TGG + Chr6:49737536-49737555 MsG0680032790.01.T01:intron 45.0%
! GTGCAATTGGTTTCGCTGTT+GGG + Chr6:49744921-49744940 MsG0680032790.01.T01:intron 45.0%
! TCCACTCAGGCAGTTGATTT+AGG - Chr6:49740312-49740331 None:intergenic 45.0%
! TGTGCAATTGGTTTCGCTGT+TGG + Chr6:49744920-49744939 MsG0680032790.01.T01:intron 45.0%
! TTCTGCACTTTTGCTCTCAG+TGG + Chr6:49738496-49738515 MsG0680032790.01.T01:intron 45.0%
! TTGAACTAAAGCACCACTGC+CGG - Chr6:49736909-49736928 None:intergenic 45.0%
!! AAACTTTCGCGAAAGGCACT+CGG - Chr6:49737771-49737790 None:intergenic 45.0%
!! AGTGGAGTTGTTAGTGGACT+TGG + Chr6:49738375-49738394 MsG0680032790.01.T01:CDS 45.0%
!! ATCATTGAACGGAGTGTTGG+TGG + Chr6:49741240-49741259 MsG0680032790.01.T01:intron 45.0%
!! CATTAAGGTGCTGTAGAGAC+TGG + Chr6:49736810-49736829 MsG0680032790.01.T01:intron 45.0%
!! CGCGTGAGAATGTTGTTTCT+TGG - Chr6:49741408-49741427 None:intergenic 45.0%
!! GAGTACCTTTTGGAGACAAG+TGG + Chr6:49738357-49738376 MsG0680032790.01.T01:CDS 45.0%
!! GTGGAGTTGTTAGTGGACTT+GGG + Chr6:49738376-49738395 MsG0680032790.01.T01:CDS 45.0%
!! GTTGTTAGTGGACTTGGGAA+AGG + Chr6:49738381-49738400 MsG0680032790.01.T01:CDS 45.0%
!! TCGAAAAAGGGAGGTTGATG+TGG + Chr6:49743786-49743805 MsG0680032790.01.T01:intron 45.0%
!! TGGGGATTTTGAGAGTGAGA+TGG - Chr6:49743309-49743328 None:intergenic 45.0%
!! TGTTAGGTTTGGGGTTTTGG+GGG - Chr6:49740190-49740209 None:intergenic 45.0%
!! TTCTTGTTGTTTGCGGCCTT+TGG + Chr6:49746819-49746838 MsG0680032790.01.T01:intron 45.0%
!!! AGGCTTAATGGTTTTGGTGG+AGG + Chr6:49738983-49739002 MsG0680032790.01.T01:intron 45.0%
!!! TTTTATTTTATATCAATTAT+CGG + Chr6:49736772-49736791 MsG0680032790.01.T01:intron 5.0%
AACGAACAGTTAACCGACGG+TGG - Chr6:49743528-49743547 None:intergenic 50.0%
ACAAGCCTCAACCGAACCAA+AGG - Chr6:49746838-49746857 None:intergenic 50.0%
ACCTTCTTCCCATTTCCGCA+TGG - Chr6:49737526-49737545 None:intergenic 50.0%
ACGACTCACCGTGTCGAATA+AGG - Chr6:49745235-49745254 None:intergenic 50.0%
AGTGACGCAAAGGACAAGAG+GGG - Chr6:49743427-49743446 None:intergenic 50.0%
ATAACCGCAACCCAATTCGC+GGG - Chr6:49744203-49744222 None:intergenic 50.0%
ATTCTGCGGCAGTTGCCAAA+AGG - Chr6:49743183-49743202 None:intergenic 50.0%
CAAAGCTGCCTCATCTGAGT+TGG - Chr6:49745210-49745229 None:intergenic 50.0%
CACTGTCGTGTCTGTGTCAA+TGG + Chr6:49738633-49738652 MsG0680032790.01.T01:intron 50.0%
CGTGGATATATCACAGCGCA+TGG - Chr6:49741440-49741459 None:intergenic 50.0%
CTAGTGACGCAAAGGACAAG+AGG - Chr6:49743429-49743448 None:intergenic 50.0%
GAAACAAGCGTCTGCACTAC+CGG - Chr6:49741494-49741513 None:intergenic 50.0%
GATAACCGCAACCCAATTCG+CGG - Chr6:49744204-49744223 None:intergenic 50.0%
GCATAACAATAGGCACCTGC+AGG - Chr6:49745697-49745716 None:intergenic 50.0%
GCTTAAGCAGTGGTTAACCG+AGG - Chr6:49743493-49743512 None:intergenic 50.0%
GGAGTTACTGCTAGCAGCAT+TGG + Chr6:49738402-49738421 MsG0680032790.01.T01:CDS 50.0%
GTTGTTTGCGGCCTTTGGTT+CGG + Chr6:49746824-49746843 MsG0680032790.01.T01:intron 50.0%
TCCATGCGGAAATGGGAAGA+AGG + Chr6:49737522-49737541 MsG0680032790.01.T01:intron 50.0%
TGCGGAAATGGGAAGAAGGT+TGG + Chr6:49737526-49737545 MsG0680032790.01.T01:intron 50.0%
TGGCAGGGTTGACGATTCAA+GGG + Chr6:49736713-49736732 MsG0680032790.01.T01:CDS 50.0%
TTCTCGCTACCTTCTTACGG+CGG - Chr6:49745430-49745449 None:intergenic 50.0%
TTCTGCGGCAGTTGCCAAAA+GGG - Chr6:49743182-49743201 None:intergenic 50.0%
TTGGCAGGGTTGACGATTCA+AGG + Chr6:49736712-49736731 MsG0680032790.01.T01:CDS 50.0%
! ACTTCGCTTTAGGTCCACTC+AGG - Chr6:49740325-49740344 None:intergenic 50.0%
! AGAGGAAGGTGTGGTGTAGA+GGG - Chr6:49743365-49743384 None:intergenic 50.0%
! AGCATCCATACTGGAGTACC+TGG + Chr6:49747181-49747200 MsG0680032790.01.T01:three_prime_UTR 50.0%
! CAGCATTGGAGTACTCCTTC+AGG + Chr6:49738416-49738435 MsG0680032790.01.T01:CDS 50.0%
! CGCTGATTGCGACTGTTAGA+AGG - Chr6:49742195-49742214 None:intergenic 50.0%
! GCAGCTGAAGAGGACTTGTT+TGG + Chr6:49738314-49738333 MsG0680032790.01.T01:intron 50.0%
! GCTATTGTGTCGTTGATCCC+TGG + Chr6:49744570-49744589 MsG0680032790.01.T01:intron 50.0%
! GGAGTACTCCTTCAGGTTTG+TGG + Chr6:49738423-49738442 MsG0680032790.01.T01:intron 50.0%
! TGAAAGTTAGTGGGTGCGTG+GGG + Chr6:49737135-49737154 MsG0680032790.01.T01:intron 50.0%
! TGCTGGTCTAGCATCCATAC+TGG + Chr6:49747172-49747191 MsG0680032790.01.T01:three_prime_UTR 50.0%
! TGTGTCGTTGATCCCTGGAA+TGG + Chr6:49744575-49744594 MsG0680032790.01.T01:intron 50.0%
! TTAGTATCTTGCACCGGCAG+TGG + Chr6:49736893-49736912 MsG0680032790.01.T01:intron 50.0%
!! GTTGTTTCTTGGAGAGGAGG+TGG - Chr6:49741397-49741416 None:intergenic 50.0%
AACAACATTCTCACGCGGCG+TGG + Chr6:49741411-49741430 MsG0680032790.01.T01:intron 55.0%
ATCCAAGCCTACCACTGTGC+AGG - Chr6:49740638-49740657 None:intergenic 55.0%
ATCTCGCCTGTCACAACCCT+CGG + Chr6:49743473-49743492 MsG0680032790.01.T01:intron 55.0%
CAACTGTCGCAGCACCTTTG+CGG + Chr6:49742073-49742092 MsG0680032790.01.T01:intron 55.0%
CAGTGGCTTCACTCATGCTC+AGG + Chr6:49738513-49738532 MsG0680032790.01.T01:intron 55.0%
CAGTTAGGACCGAGGCTTCT+TGG + Chr6:49736693-49736712 MsG0680032790.01.T01:CDS 55.0%
GCAAAGGACAAGAGGGGTGA+AGG - Chr6:49743421-49743440 None:intergenic 55.0%
GGATTTCCCTGCACAGTGGT+AGG + Chr6:49740628-49740647 MsG0680032790.01.T01:intron 55.0%
GGCACCTGCAGGCAAGTTAA+TGG - Chr6:49745686-49745705 None:intergenic 55.0%
GGTTAACCGAGGGTTGTGAC+AGG - Chr6:49743482-49743501 None:intergenic 55.0%
GGTTGTGACAGGCGAGATTG+AGG - Chr6:49743471-49743490 None:intergenic 55.0%
GTTTCTTGGAGAGGAGGTGG+TGG - Chr6:49741394-49741413 None:intergenic 55.0%
TACCTTCTTACGGCGGTGCT+GGG - Chr6:49745423-49745442 None:intergenic 55.0%
TCAACCCTGCCAAGAAGCCT+CGG - Chr6:49736705-49736724 None:intergenic 55.0%
TCCAAGCCTACCACTGTGCA+GGG - Chr6:49740637-49740656 None:intergenic 55.0%
TTCGACACGGTGAGTCGTTG+TGG + Chr6:49745237-49745256 MsG0680032790.01.T01:CDS 55.0%
! CTGTCATTTGCGACCCTTCG+TGG - Chr6:49742116-49742135 None:intergenic 55.0%
! GAAAGTTAGTGGGTGCGTGG+GGG + Chr6:49737136-49737155 MsG0680032790.01.T01:intron 55.0%
! GAGAGGAAGGTGTGGTGTAG+AGG - Chr6:49743366-49743385 None:intergenic 55.0%
!!! GGTTTGGGGTTTTGGGGGTT+AGG - Chr6:49740185-49740204 None:intergenic 55.0%
AGGACCGAGGCTTCTTGGCA+GGG + Chr6:49736698-49736717 MsG0680032790.01.T01:CDS 60.0%
AGGACGACATGACGCAGGTG+AGG - Chr6:49743396-49743415 None:intergenic 60.0%
AGGAGAGGACGACATGACGC+AGG - Chr6:49743401-49743420 None:intergenic 60.0%
CACCTTTGCGGCTGTTGGAG+CGG + Chr6:49742085-49742104 MsG0680032790.01.T01:intron 60.0%
CTACCTTCTTACGGCGGTGC+TGG - Chr6:49745424-49745443 None:intergenic 60.0%
GACATGACGCAGGTGAGGGT+CGG - Chr6:49743391-49743410 None:intergenic 60.0%
GGACAAGAGGGGTGAAGGAG+AGG - Chr6:49743416-49743435 None:intergenic 60.0%
GGACGACATGACGCAGGTGA+GGG - Chr6:49743395-49743414 None:intergenic 60.0%
GTGCTGGGTCATGGCAAGCA+TGG - Chr6:49745408-49745427 None:intergenic 60.0%
TAGGACCGAGGCTTCTTGGC+AGG + Chr6:49736697-49736716 MsG0680032790.01.T01:CDS 60.0%
TCCCTGCACAGTGGTAGGCT+TGG + Chr6:49740633-49740652 MsG0680032790.01.T01:intron 60.0%
TGGAGCGGCTGTTCCACGAA+GGG + Chr6:49742100-49742119 MsG0680032790.01.T01:intron 60.0%
TTGGAGCGGCTGTTCCACGA+AGG + Chr6:49742099-49742118 MsG0680032790.01.T01:intron 60.0%
! CATGCTGAGGTACCCGAGAG+TGG + Chr6:49746955-49746974 MsG0680032790.01.T01:intron 60.0%
! GGGTGGATTTCCCTGCACAG+TGG + Chr6:49740624-49740643 MsG0680032790.01.T01:intron 60.0%
! GGTACCCGCGAATTGGGTTG+CGG + Chr6:49744196-49744215 MsG0680032790.01.T01:intron 60.0%
! TGGCAAAGTGGGCTCCACTG+AGG + Chr6:49737623-49737642 MsG0680032790.01.T01:intron 60.0%
!! TGCGGCCTTTGGTTCGGTTG+AGG + Chr6:49746830-49746849 MsG0680032790.01.T01:intron 60.0%
AGCCGCTCCAACAGCCGCAA+AGG - Chr6:49742090-49742109 None:intergenic 65.0%
ATGACGCAGGTGAGGGTCGG+CGG - Chr6:49743388-49743407 None:intergenic 65.0%
CGCAGCACCTTTGCGGCTGT+TGG + Chr6:49742080-49742099 MsG0680032790.01.T01:intron 65.0%
GACCCAGCACCGCCGTAAGA+AGG + Chr6:49745418-49745437 MsG0680032790.01.T01:CDS 65.0%
GTGTTAGGCGCGCCTCTCTG+TGG - Chr6:49743228-49743247 None:intergenic 65.0%
! CTTACGGCGGTGCTGGGTCA+TGG - Chr6:49745417-49745436 None:intergenic 65.0%
GGTCGGCGGAGAGGAAGGTG+TGG - Chr6:49743374-49743393 None:intergenic 70.0%
GTGAGGGTCGGCGGAGAGGA+AGG - Chr6:49743379-49743398 None:intergenic 70.0%
GCAGGTGAGGGTCGGCGGAG+AGG - Chr6:49743383-49743402 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr6 gene 49736645 49747647 49736645 ID=MsG0680032790.01;Name=MsG0680032790.01
Chr6 mRNA 49736645 49747647 49736645 ID=MsG0680032790.01.T01;Parent=MsG0680032790.01;Name=MsG0680032790.01.T01;_AED=0.56;_eAED=0.69;_QI=0|0.14|0.25|0.75|1|1|8|256|206
Chr6 exon 49747464 49747647 49747464 ID=MsG0680032790.01.T01:exon:10722;Parent=MsG0680032790.01.T01
Chr6 exon 49747171 49747243 49747171 ID=MsG0680032790.01.T01:exon:10721;Parent=MsG0680032790.01.T01
Chr6 exon 49746387 49746476 49746387 ID=MsG0680032790.01.T01:exon:10720;Parent=MsG0680032790.01.T01
Chr6 exon 49745701 49745786 49745701 ID=MsG0680032790.01.T01:exon:10719;Parent=MsG0680032790.01.T01
Chr6 exon 49745216 49745439 49745216 ID=MsG0680032790.01.T01:exon:10718;Parent=MsG0680032790.01.T01
Chr6 exon 49741617 49741656 49741617 ID=MsG0680032790.01.T01:exon:10717;Parent=MsG0680032790.01.T01
Chr6 exon 49738348 49738437 49738348 ID=MsG0680032790.01.T01:exon:10716;Parent=MsG0680032790.01.T01
Chr6 exon 49736645 49736734 49736645 ID=MsG0680032790.01.T01:exon:10715;Parent=MsG0680032790.01.T01
Chr6 CDS 49736645 49736734 49736645 ID=MsG0680032790.01.T01:cds;Parent=MsG0680032790.01.T01
Chr6 CDS 49738348 49738437 49738348 ID=MsG0680032790.01.T01:cds;Parent=MsG0680032790.01.T01
Chr6 CDS 49741617 49741656 49741617 ID=MsG0680032790.01.T01:cds;Parent=MsG0680032790.01.T01
Chr6 CDS 49745216 49745439 49745216 ID=MsG0680032790.01.T01:cds;Parent=MsG0680032790.01.T01
Chr6 CDS 49745701 49745786 49745701 ID=MsG0680032790.01.T01:cds;Parent=MsG0680032790.01.T01
Chr6 CDS 49746387 49746476 49746387 ID=MsG0680032790.01.T01:cds;Parent=MsG0680032790.01.T01
Chr6 CDS 49747171 49747171 49747171 ID=MsG0680032790.01.T01:cds;Parent=MsG0680032790.01.T01
Chr6 three_prime_UTR 49747172 49747243 49747172 ID=MsG0680032790.01.T01:three_prime_utr;Parent=MsG0680032790.01.T01
Chr6 three_prime_UTR 49747464 49747647 49747464 ID=MsG0680032790.01.T01:three_prime_utr;Parent=MsG0680032790.01.T01
Gene Sequence

>MsG0680032790.01.T01

ATGGGTTTGAATTTTGGTGTTGTGATTAGATTTCAAAGCCATGTTATGCAGTTAGGACCGAGGCTTCTTGGCAGGGTTGACGATTCAAGGGAGAAAATTGAGTACCTTTTGGAGACAAGTGGAGTTGTTAGTGGACTTGGGAAAGGAGTTACTGCTAGCAGCATTGGAGTACTCCTTCAGCTTTTGGAGAATCATATTAAGAAAGAGCTCACCGAGAATAATGAGGCAGCTTTGATCCTTATTCGACACGGTGAGTCGTTGTGGAATGAGAAGAATTTGTTCACAGGTTGTGTTGATGTATCACTTAGCAAGAAGGGTATAGATGAGGCAATTGAAGCTGGAAAAAGAATTAGTAGCATTCCAGTTGATCTCATATTTACATCTGCTTTGATTCGTGCTCAAATGACAGCCATGCTTGCCATGACCCAGCACCGCCGTAAGAAGGTGCCTATTGTTATGCACAACGAGAGTGAACAAGCAAAGGCATGGAGTCAAGTTTTTAGTGAAGATACAAAAAGCAGTCCATTCCAGTATTTTGATGGAGTTTATGTGTCTAACTGCCAATGGAATGTTGCAATGGAAATTCTGGATTTTTCTTATGATTGTTGTGTTCTAGTGTGA
Protein sequence

>MsG0680032790.01.T01

MGLNFGVVIRFQSHVMQLGPRLLGRVDDSREKIEYLLETSGVVSGLGKGVTASSIGVLLQLLENHIKKELTENNEAALILIRHGESLWNEKNLFTGCVDVSLSKKGIDEAIEAGKRISSIPVDLIFTSALIRAQMTAMLAMTQHRRKKVPIVMHNESEQAKAWSQVFSEDTKSSPFQYFDGVYVSNCQWNVAMEILDFSYDCCVLV*