AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680033942.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680033942.01.T01 MTR_6g464620 95.699 372 16 0 18 389 10 381 0.0 753
MsG0680033942.01.T01 MTR_1g102070 79.167 360 75 0 30 389 17 376 0.0 619
MsG0680033942.01.T01 MTR_8g033380 68.481 349 108 2 41 388 22 369 2.35e-180 506
MsG0680033942.01.T01 MTR_3g096500 54.444 360 162 1 25 384 21 378 1.03e-142 411
MsG0680033942.01.T01 MTR_1g081840 54.624 346 156 1 40 385 22 366 2.34e-137 397
MsG0680033942.01.T01 MTR_3g088745 55.786 337 146 3 50 385 15 349 5.51e-132 383
MsG0680033942.01.T01 MTR_8g093930 47.091 361 186 3 30 389 6 362 2.31e-114 338
MsG0680033942.01.T01 MTR_8g093980 47.262 347 176 4 40 384 27 368 6.68e-110 327
MsG0680033942.01.T01 MTR_3g092890 35.860 343 181 9 47 376 11 327 2.21e-58 193
MsG0680033942.01.T01 MTR_1g034120 35.061 328 193 6 49 360 2 325 2.52e-58 194
MsG0680033942.01.T01 MTR_1g034060 34.639 332 197 6 49 364 2 329 4.75e-57 190
MsG0680033942.01.T01 MTR_4g087090 36.943 314 187 5 55 360 12 322 1.58e-53 181
MsG0680033942.01.T01 MTR_5g082750 34.472 322 188 7 50 360 24 333 2.72e-53 181
MsG0680033942.01.T01 MTR_7g068650 34.365 323 192 6 50 360 25 339 1.48e-51 176
MsG0680033942.01.T01 MTR_3g070860 32.808 317 200 5 50 360 25 334 1.88e-51 176
MsG0680033942.01.T01 MTR_4g015790 32.184 348 201 5 50 377 24 356 3.85e-51 176
MsG0680033942.01.T01 MTR_8g064200 31.731 312 200 5 51 359 29 330 7.36e-51 174
MsG0680033942.01.T01 MTR_8g064200 31.731 312 200 5 51 359 34 335 1.35e-50 174
MsG0680033942.01.T01 MTR_5g048470 33.333 291 179 5 72 359 53 331 7.93e-50 172
MsG0680033942.01.T01 MTR_4g087140 33.537 328 197 7 53 364 6 328 9.11e-50 171
MsG0680033942.01.T01 MTR_4g087110 33.231 325 197 6 55 364 8 327 1.10e-49 171
MsG0680033942.01.T01 MTR_2g437380 32.288 319 200 5 41 352 16 325 1.47e-49 171
MsG0680033942.01.T01 MTR_4g087120 33.645 321 193 6 55 360 8 323 2.69e-49 170
MsG0680033942.01.T01 MTR_1g034140 33.436 326 188 6 40 355 4 310 2.35e-48 167
MsG0680033942.01.T01 MTR_8g075890 34.539 304 187 6 43 342 8 303 1.30e-47 166
MsG0680033942.01.T01 MTR_4g087100 32.615 325 199 7 55 364 8 327 1.50e-47 166
MsG0680033942.01.T01 MTR_5g055680 31.013 316 200 7 49 359 22 324 7.57e-47 164
MsG0680033942.01.T01 MTR_2g083030 35.621 306 162 7 71 369 36 313 1.94e-46 162
MsG0680033942.01.T01 MTR_5g032880 30.699 329 212 7 49 370 351 670 6.77e-46 167
MsG0680033942.01.T01 MTR_5g032880 30.275 327 198 8 49 365 13 319 2.36e-42 157
MsG0680033942.01.T01 MTR_0009s0050 31.861 317 202 8 46 359 19 324 1.02e-45 160
MsG0680033942.01.T01 MTR_0009s0050 31.861 317 202 8 46 359 19 324 1.02e-45 161
MsG0680033942.01.T01 MTR_7g102820 31.034 348 188 8 51 367 38 364 1.10e-45 161
MsG0680033942.01.T01 MTR_8g024120 33.231 325 180 8 51 360 18 320 1.10e-45 160
MsG0680033942.01.T01 MTR_0328s0030 31.613 310 194 8 51 355 22 318 1.48e-45 160
MsG0680033942.01.T01 MTR_1g062110 31.627 332 198 7 51 366 38 356 1.49e-45 161
MsG0680033942.01.T01 MTR_5g048570 30.938 320 199 7 46 359 19 322 1.72e-45 160
MsG0680033942.01.T01 MTR_5g032870 30.205 341 216 9 49 378 13 342 1.84e-45 160
MsG0680033942.01.T01 MTR_5g055900 31.210 314 198 8 51 359 24 324 2.11e-45 160
MsG0680033942.01.T01 MTR_8g075830 35.314 303 184 6 44 342 9 303 3.34e-45 160
MsG0680033942.01.T01 MTR_2g102570 33.333 315 186 5 72 379 52 349 4.29e-45 159
MsG0680033942.01.T01 MTR_0009s0480 30.476 315 191 7 51 355 23 319 4.91e-45 159
MsG0680033942.01.T01 MTR_7g062580 29.582 311 204 6 49 355 29 328 6.64e-45 159
MsG0680033942.01.T01 MTR_2g083000 34.295 312 176 7 66 372 27 314 9.32e-45 157
MsG0680033942.01.T01 MTR_1g033810 32.530 332 205 9 30 355 4 322 9.69e-45 158
MsG0680033942.01.T01 MTR_3g063180 32.288 319 187 7 51 355 21 324 1.40e-44 158
MsG0680033942.01.T01 MTR_5g055800 32.051 312 189 11 51 355 24 319 2.63e-44 157
MsG0680033942.01.T01 MTR_2g072910 31.699 306 197 7 50 352 27 323 4.51e-44 156
MsG0680033942.01.T01 MTR_5g005570 31.613 310 181 5 69 376 34 314 7.25e-44 155
MsG0680033942.01.T01 MTR_2g072890 31.475 305 197 7 51 352 29 324 7.94e-44 156
MsG0680033942.01.T01 MTR_6g015950 33.731 335 184 10 50 371 15 324 2.42e-43 154
MsG0680033942.01.T01 MTR_5g048850 29.487 312 200 7 50 355 23 320 2.91e-43 154
MsG0680033942.01.T01 MTR_5g011250 31.498 327 198 8 50 360 18 334 4.29e-43 154
MsG0680033942.01.T01 MTR_7g062570 29.450 309 203 5 51 355 31 328 7.10e-43 153
MsG0680033942.01.T01 MTR_5g048550 30.449 312 199 7 46 352 19 317 1.18e-42 152
MsG0680033942.01.T01 MTR_5g055820 29.773 309 202 6 51 355 24 321 2.01e-42 152
MsG0680033942.01.T01 MTR_3g058610 33.876 307 180 7 40 342 16 303 2.25e-42 152
MsG0680033942.01.T01 MTR_7g451860 33.438 317 173 9 67 376 36 321 6.83e-42 150
MsG0680033942.01.T01 MTR_7g047670 33.438 317 173 9 67 376 36 321 6.83e-42 150
MsG0680033942.01.T01 MTR_5g048740 30.794 315 199 8 51 359 22 323 7.59e-42 150
MsG0680033942.01.T01 MTR_1g070085 31.118 331 212 8 50 375 13 332 1.05e-41 150
MsG0680033942.01.T01 MTR_1g070085 31.118 331 212 8 50 375 13 332 1.05e-41 150
MsG0680033942.01.T01 MTR_8g074050 32.698 315 193 9 72 381 52 352 1.20e-41 150
MsG0680033942.01.T01 MTR_2g068960 31.290 310 187 7 68 366 59 353 2.37e-41 149
MsG0680033942.01.T01 MTR_7g016090 30.564 337 207 10 50 376 17 336 2.56e-41 149
MsG0680033942.01.T01 MTR_7g016090 30.564 337 207 10 50 376 15 334 3.01e-41 148
MsG0680033942.01.T01 MTR_7g062550 29.904 311 203 6 49 355 34 333 3.86e-41 149
MsG0680033942.01.T01 MTR_7g062600 30.351 313 200 8 49 355 25 325 4.00e-41 149
MsG0680033942.01.T01 MTR_5g022020 33.893 298 173 5 55 342 20 303 4.76e-41 148
MsG0680033942.01.T01 MTR_8g074070 31.447 318 199 7 69 381 49 352 6.09e-41 148
MsG0680033942.01.T01 MTR_8g009110 32.534 292 183 3 72 359 60 341 1.41e-40 147
MsG0680033942.01.T01 MTR_2g068950 30.392 306 193 6 69 366 60 353 4.74e-40 146
MsG0680033942.01.T01 MTR_3g072810 33.762 311 180 7 51 352 17 310 5.58e-40 145
MsG0680033942.01.T01 MTR_4g074130 31.525 295 183 6 67 360 35 311 1.01e-39 144
MsG0680033942.01.T01 MTR_4g024660 28.610 367 230 7 17 370 10 357 1.20e-39 145
MsG0680033942.01.T01 MTR_1g093140 32.343 303 185 7 69 364 70 359 1.59e-39 145
MsG0680033942.01.T01 MTR_8g009090 33.106 293 179 4 72 359 60 340 1.75e-39 144
MsG0680033942.01.T01 MTR_5g055690 30.466 279 181 6 72 348 47 314 1.82e-39 144
MsG0680033942.01.T01 MTR_3g091350 30.556 324 200 6 72 387 59 365 2.13e-39 144
MsG0680033942.01.T01 MTR_8g062600 31.879 298 178 7 70 357 65 347 2.58e-39 144
MsG0680033942.01.T01 MTR_8g028435 31.834 289 180 5 72 355 60 336 2.59e-39 144
MsG0680033942.01.T01 MTR_3g117420 27.707 314 214 5 69 380 49 351 3.49e-39 143
MsG0680033942.01.T01 MTR_1g070135 31.111 315 201 8 50 360 14 316 3.61e-39 143
MsG0680033942.01.T01 MTR_2g069010 29.739 306 195 5 69 366 66 359 3.97e-39 144
MsG0680033942.01.T01 MTR_3g026150 29.010 293 196 4 68 359 56 337 4.72e-39 143
MsG0680033942.01.T01 MTR_8g009170 30.671 313 186 6 72 373 60 352 8.95e-39 142
MsG0680033942.01.T01 MTR_8g009160 31.023 303 191 5 58 355 47 336 1.50e-38 142
MsG0680033942.01.T01 MTR_1g011580 33.106 293 156 8 59 342 57 318 1.75e-38 142
MsG0680033942.01.T01 MTR_4g087130 31.348 319 202 6 55 360 8 322 2.54e-38 141
MsG0680033942.01.T01 MTR_1g093120 31.457 302 177 6 69 359 64 346 2.84e-38 141
MsG0680033942.01.T01 MTR_5g059130 32.288 319 188 9 48 355 17 318 3.20e-38 140
MsG0680033942.01.T01 MTR_2g069210 30.255 314 203 6 72 381 64 365 3.84e-38 141
MsG0680033942.01.T01 MTR_5g059140 33.333 312 184 11 51 352 18 315 5.71e-38 140
MsG0680033942.01.T01 MTR_2g019370 28.889 315 193 11 72 375 28 322 7.09e-38 139
MsG0680033942.01.T01 MTR_3g045230 30.769 299 182 8 51 340 29 311 1.04e-37 139
MsG0680033942.01.T01 MTR_3g091360 31.962 316 190 5 72 379 52 350 2.07e-37 139
MsG0680033942.01.T01 MTR_4g116010 28.571 287 188 5 72 355 50 322 2.11e-37 139
MsG0680033942.01.T01 MTR_1g048940 27.859 341 227 7 32 366 5 332 2.68e-37 138
MsG0680033942.01.T01 MTR_7g063730 26.994 326 223 5 46 367 35 349 2.88e-37 139
MsG0680033942.01.T01 MTR_3g117485 28.025 314 206 7 52 355 25 328 3.50e-37 138
MsG0680033942.01.T01 MTR_2g069020 31.186 295 184 7 69 357 64 345 3.69e-37 138
MsG0680033942.01.T01 MTR_7g056347 29.375 320 207 6 69 381 64 371 3.75e-37 138
MsG0680033942.01.T01 MTR_1g093110 30.976 297 186 6 69 359 67 350 4.51e-37 138
MsG0680033942.01.T01 MTR_4g123020 30.769 312 183 10 62 360 7 298 7.04e-37 136
MsG0680033942.01.T01 MTR_2g069190 32.653 294 180 6 72 360 68 348 7.19e-37 137
MsG0680033942.01.T01 MTR_7g045650 28.767 292 192 6 46 333 31 310 7.34e-37 136
MsG0680033942.01.T01 MTR_0032s0040 31.498 327 190 9 51 359 39 349 8.00e-37 137
MsG0680033942.01.T01 MTR_7g029655 32.609 322 182 10 51 355 39 342 8.29e-37 137
MsG0680033942.01.T01 MTR_3g043900 30.233 301 180 8 51 340 29 310 8.33e-37 137
MsG0680033942.01.T01 MTR_2g069020 31.186 295 184 7 69 357 64 345 8.95e-37 138
MsG0680033942.01.T01 MTR_8g461330 28.302 318 194 9 60 360 10 310 1.18e-36 136
MsG0680033942.01.T01 MTR_5g065010 27.885 312 197 5 72 373 39 332 1.33e-36 136
MsG0680033942.01.T01 MTR_8g030880 31.013 316 189 8 68 373 6 302 1.57e-36 135
MsG0680033942.01.T01 MTR_2g033270 31.790 324 181 12 67 376 14 311 1.63e-36 135
MsG0680033942.01.T01 MTR_1g032250 30.357 336 203 9 50 375 47 361 1.79e-36 136
MsG0680033942.01.T01 MTR_7g016080 28.485 330 192 9 50 365 15 314 1.99e-36 135
MsG0680033942.01.T01 MTR_8g074070 31.132 318 181 9 69 381 49 333 2.61e-36 135
MsG0680033942.01.T01 MTR_1g070080 31.046 306 192 7 50 349 13 305 4.34e-36 135
MsG0680033942.01.T01 MTR_8g008930 30.844 308 194 6 58 359 47 341 4.69e-36 135
MsG0680033942.01.T01 MTR_8g041620 30.068 296 182 6 70 355 66 346 5.96e-36 135
MsG0680033942.01.T01 MTR_1g032140 30.172 348 209 11 51 387 41 365 1.08e-35 134
MsG0680033942.01.T01 MTR_2g437380 32.627 236 146 3 127 358 11 237 1.11e-35 132
MsG0680033942.01.T01 MTR_2g069060 28.662 314 199 6 70 377 47 341 1.72e-35 133
MsG0680033942.01.T01 MTR_0056s0160 39.024 164 99 1 193 355 42 205 1.77e-35 130
MsG0680033942.01.T01 MTR_2g069300 34.091 264 158 7 72 332 54 304 1.99e-35 133
MsG0680033942.01.T01 MTR_1g032220 29.377 337 205 10 50 375 47 361 3.45e-35 133
MsG0680033942.01.T01 MTR_8g469400 29.299 314 187 6 64 370 59 344 3.94e-35 132
MsG0680033942.01.T01 MTR_2g068840 29.909 331 190 8 49 360 31 338 5.17e-35 132
MsG0680033942.01.T01 MTR_2g025120 29.167 312 191 9 73 372 5 298 6.39e-35 131
MsG0680033942.01.T01 MTR_8g041600 28.716 296 186 5 70 355 66 346 8.23e-35 132
MsG0680033942.01.T01 MTR_4g093840 30.357 280 183 3 72 349 62 331 1.04e-34 132
MsG0680033942.01.T01 MTR_1g086550 30.000 310 181 8 70 360 18 310 1.26e-34 131
MsG0680033942.01.T01 MTR_3g072820 29.245 318 203 7 42 352 11 313 1.40e-34 130
MsG0680033942.01.T01 MTR_4g117880 30.612 294 186 6 72 359 60 341 2.54e-34 130
MsG0680033942.01.T01 MTR_2g070870 29.097 299 178 10 72 360 28 302 3.84e-34 129
MsG0680033942.01.T01 MTR_7g105070 30.897 301 186 8 72 365 59 344 4.60e-34 130
MsG0680033942.01.T01 MTR_0009s0480 29.771 262 156 7 51 302 23 266 8.24e-34 127
MsG0680033942.01.T01 MTR_3g088565 27.333 300 192 7 70 360 1 283 2.17e-33 127
MsG0680033942.01.T01 MTR_7g077670 32.166 314 181 10 71 373 10 302 2.29e-33 127
MsG0680033942.01.T01 MTR_2g069090 31.058 293 185 6 72 359 68 348 5.20e-33 127
MsG0680033942.01.T01 MTR_1g070185 30.097 309 198 5 51 355 45 339 1.27e-32 126
MsG0680033942.01.T01 MTR_1g070085 36.264 182 115 1 195 375 73 254 1.47e-32 123
MsG0680033942.01.T01 MTR_1g070120 29.245 318 204 8 51 359 15 320 1.50e-32 125
MsG0680033942.01.T01 MTR_1g070100 36.813 182 114 1 195 375 69 250 1.60e-32 123
MsG0680033942.01.T01 MTR_3g083370 29.483 329 179 11 73 381 5 300 2.14e-32 124
MsG0680033942.01.T01 MTR_7g081710 29.231 325 208 9 50 366 24 334 2.20e-32 125
MsG0680033942.01.T01 MTR_7g102720 30.479 292 181 7 64 349 26 301 2.37e-32 124
MsG0680033942.01.T01 MTR_1g062110 31.061 264 157 6 51 300 38 290 3.25e-32 124
MsG0680033942.01.T01 MTR_3g026150 29.915 234 156 2 127 359 8 234 3.48e-32 122
MsG0680033942.01.T01 MTR_0009s0050 37.500 168 104 1 193 359 59 226 3.75e-32 122
MsG0680033942.01.T01 MTR_0009s0050 37.500 168 104 1 193 359 59 226 4.05e-32 122
MsG0680033942.01.T01 MTR_3g117485 29.804 255 163 6 107 355 12 256 4.09e-32 122
MsG0680033942.01.T01 MTR_7g062560 25.723 346 227 8 21 360 9 330 5.45e-32 124
MsG0680033942.01.T01 MTR_8g009080 30.405 296 188 6 69 359 91 373 5.92e-32 125
MsG0680033942.01.T01 MTR_8g063070 27.829 327 203 6 70 382 65 372 6.15e-32 124
MsG0680033942.01.T01 MTR_5g048850 28.517 263 168 7 50 306 23 271 6.16e-32 122
MsG0680033942.01.T01 MTR_2g072910 30.469 256 166 6 50 302 27 273 1.30e-31 121
MsG0680033942.01.T01 MTR_1g043760 29.373 303 187 5 72 365 54 338 3.07e-31 122
MsG0680033942.01.T01 MTR_0009s0050 43.511 131 73 1 230 359 14 144 1.56e-30 115
MsG0680033942.01.T01 MTR_8g009170 31.950 241 139 4 72 304 60 283 3.26e-30 118
MsG0680033942.01.T01 MTR_5g055690 29.614 233 151 6 72 302 47 268 2.47e-29 115
MsG0680033942.01.T01 MTR_2g068800 31.488 289 133 9 51 318 33 277 3.63e-29 115
MsG0680033942.01.T01 MTR_1g043810 29.126 309 190 7 72 369 54 344 1.39e-28 115
MsG0680033942.01.T01 MTR_5g085330 28.435 313 170 10 70 360 3 283 1.80e-28 114
MsG0680033942.01.T01 MTR_1g043770 28.155 309 194 6 51 349 31 321 2.88e-28 114
MsG0680033942.01.T01 MTR_2g069060 30.252 238 145 4 70 302 25 246 3.38e-28 111
MsG0680033942.01.T01 MTR_8g006930 30.233 301 185 7 69 359 64 349 4.37e-28 114
MsG0680033942.01.T01 MTR_1g043775 30.208 288 185 5 72 355 54 329 5.05e-28 113
MsG0680033942.01.T01 MTR_3g026150 29.185 233 153 4 68 299 56 277 5.43e-28 111
MsG0680033942.01.T01 MTR_4g096840 27.389 314 198 11 72 375 29 322 5.62e-28 112
MsG0680033942.01.T01 MTR_7g056353 28.873 284 179 4 110 384 79 348 8.44e-28 114
MsG0680033942.01.T01 MTR_6g092620 28.082 292 171 9 70 347 1 267 1.48e-27 110
MsG0680033942.01.T01 MTR_7g078010 29.412 323 203 7 69 381 64 371 1.67e-27 112
MsG0680033942.01.T01 MTR_8g009120 28.431 306 192 5 58 359 47 329 2.00e-27 111
MsG0680033942.01.T01 MTR_8g041600 29.114 237 147 4 70 300 66 287 2.17e-27 110
MsG0680033942.01.T01 MTR_7g056393 29.236 301 188 5 69 359 64 349 7.64e-27 110
MsG0680033942.01.T01 MTR_3g040410 28.070 285 182 7 72 350 6 273 2.58e-26 107
MsG0680033942.01.T01 MTR_4g132770 39.516 124 72 2 240 360 28 151 3.22e-26 103
MsG0680033942.01.T01 MTR_1g027290 25.153 326 202 8 50 360 17 315 5.79e-26 107
MsG0680033942.01.T01 MTR_0009s0400 42.241 116 66 1 241 355 1 116 9.88e-26 102
MsG0680033942.01.T01 MTR_1g070135 30.315 254 161 8 50 299 14 255 2.10e-25 104
MsG0680033942.01.T01 MTR_4g119410 29.206 315 194 8 69 373 64 359 5.15e-25 105
MsG0680033942.01.T01 MTR_3g464530 27.437 277 171 6 72 340 34 288 7.17e-25 103
MsG0680033942.01.T01 MTR_4g115990 26.400 250 157 5 109 355 76 301 2.01e-24 102
MsG0680033942.01.T01 MTR_8g009080 29.365 252 159 6 69 318 91 325 3.43e-24 102
MsG0680033942.01.T01 MTR_4g011720 28.155 309 204 10 72 376 9 303 4.56e-24 101
MsG0680033942.01.T01 MTR_8g009080 29.915 234 149 5 69 300 91 311 2.50e-23 100
MsG0680033942.01.T01 MTR_1g043770 28.148 270 169 5 51 313 31 282 7.06e-23 98.2
MsG0680033942.01.T01 MTR_8g009150 26.144 306 191 5 58 359 47 321 7.95e-23 98.6
MsG0680033942.01.T01 MTR_4g011690 27.707 314 208 10 72 377 9 311 1.28e-22 97.4
MsG0680033942.01.T01 MTR_8g009180 36.301 146 90 1 213 355 121 266 1.23e-21 94.4
MsG0680033942.01.T01 MTR_1g043810 29.167 240 145 5 72 304 54 275 1.50e-21 94.7
MsG0680033942.01.T01 MTR_1g043775 30.342 234 150 4 72 304 54 275 2.77e-21 93.6
MsG0680033942.01.T01 MTR_4g100600 29.605 304 179 12 70 356 7 292 3.37e-21 93.6
MsG0680033942.01.T01 MTR_5g025090 27.551 294 190 9 69 360 2 274 1.47e-20 91.3
MsG0680033942.01.T01 MTR_6g088665 28.667 300 188 11 74 356 23 313 1.91e-20 91.7
MsG0680033942.01.T01 MTR_5g027230 28.082 292 185 9 72 360 6 275 2.32e-20 90.9
MsG0680033942.01.T01 MTR_6g088665 28.571 301 188 11 74 356 23 314 2.63e-20 91.3
MsG0680033942.01.T01 MTR_2g025120 26.809 235 149 7 73 302 5 221 1.33e-19 87.0
MsG0680033942.01.T01 MTR_3g108520 27.160 324 214 10 69 382 4 315 1.46e-19 89.0
MsG0680033942.01.T01 MTR_1g070110 42.056 107 62 0 259 365 110 216 3.23e-19 86.3
MsG0680033942.01.T01 MTR_7g090520 26.403 303 206 9 72 369 10 300 1.80e-18 85.9
MsG0680033942.01.T01 MTR_3g083370 28.514 249 127 9 73 302 5 221 2.32e-18 84.0
MsG0680033942.01.T01 MTR_1g011600 27.885 312 189 13 59 356 5 294 4.61e-18 84.3
MsG0680033942.01.T01 MTR_5g025050 26.712 292 189 10 72 360 5 274 4.75e-18 84.3
MsG0680033942.01.T01 MTR_4g100590 26.950 282 178 10 89 356 20 287 2.06e-17 82.8
MsG0680033942.01.T01 MTR_4g021360 24.232 293 194 5 69 349 4 280 2.81e-17 82.4
MsG0680033942.01.T01 MTR_1g043840 32.836 134 90 0 198 331 51 184 1.65e-16 80.5
MsG0680033942.01.T01 MTR_7g078010 28.814 236 149 6 69 300 64 284 1.97e-16 79.7
MsG0680033942.01.T01 MTR_3g464530 25.316 237 147 6 72 300 34 248 2.15e-15 75.9
MsG0680033942.01.T01 MTR_4g021380 23.839 323 229 6 69 383 4 317 3.72e-15 76.3
MsG0680033942.01.T01 MTR_1g032240 38.776 98 50 2 238 334 58 146 1.05e-14 72.0
MsG0680033942.01.T01 MTR_6g035160 31.544 149 98 3 235 381 29 175 4.14e-14 70.5
MsG0680033942.01.T01 MTR_5g024940 26.280 293 166 8 81 360 1 256 8.70e-14 71.6
MsG0680033942.01.T01 MTR_5g025060 23.711 291 174 9 72 360 6 250 3.66e-13 69.7
MsG0680033942.01.T01 MTR_4g011720 26.953 256 168 11 72 321 9 251 8.28e-12 65.5
MsG0680033942.01.T01 MTR_5g031760 52.727 55 26 0 214 268 1 55 1.45e-11 59.7
MsG0680033942.01.T01 MTR_4g100600 28.959 221 128 10 70 278 7 210 2.29e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680033942.01.T01 AT4G25420 68.839 353 109 1 35 387 24 375 0.0 525
MsG0680033942.01.T01 AT5G51810 66.949 354 112 2 32 385 23 371 0.0 512
MsG0680033942.01.T01 AT5G07200 63.187 364 130 3 29 388 14 377 8.11e-174 489
MsG0680033942.01.T01 AT1G60980 61.918 365 131 4 29 388 12 373 3.63e-168 475
MsG0680033942.01.T01 AT4G25420 67.778 270 86 1 35 304 24 292 3.98e-137 394
MsG0680033942.01.T01 AT5G51810 65.942 276 89 1 32 307 23 293 1.35e-136 392
MsG0680033942.01.T01 AT1G44090 45.232 367 195 5 25 389 18 380 1.19e-110 329
MsG0680033942.01.T01 AT3G19010 36.697 327 181 9 66 379 23 336 9.51e-56 187
MsG0680033942.01.T01 AT3G19010 36.697 327 181 9 66 379 23 336 9.51e-56 187
MsG0680033942.01.T01 AT5G05600 35.647 317 191 6 50 360 37 346 6.91e-53 180
MsG0680033942.01.T01 AT5G24530 35.736 333 172 10 45 360 10 317 1.22e-52 179
MsG0680033942.01.T01 AT3G11180 33.136 338 197 8 50 377 66 384 3.02e-50 174
MsG0680033942.01.T01 AT3G11180 33.136 338 197 8 50 377 66 384 3.87e-50 174
MsG0680033942.01.T01 AT3G55970 32.641 337 193 7 51 368 25 346 3.57e-49 170
MsG0680033942.01.T01 AT4G10500 32.362 309 188 8 48 349 17 311 5.49e-49 169
MsG0680033942.01.T01 AT4G21200 32.609 276 168 4 67 340 37 296 1.42e-47 165
MsG0680033942.01.T01 AT2G38240 33.651 315 185 8 51 355 23 323 4.87e-47 164
MsG0680033942.01.T01 AT4G10490 33.623 345 188 12 38 365 7 327 2.96e-46 162
MsG0680033942.01.T01 AT3G21420 35.106 282 174 3 72 351 55 329 8.50e-46 161
MsG0680033942.01.T01 AT1G78550 31.683 303 192 8 50 347 28 320 1.64e-44 157
MsG0680033942.01.T01 AT3G19000 32.075 318 202 5 71 380 31 342 5.03e-44 156
MsG0680033942.01.T01 AT3G51240 33.446 296 185 5 51 342 15 302 7.48e-44 156
MsG0680033942.01.T01 AT3G13610 31.889 323 185 8 51 360 38 338 1.83e-43 155
MsG0680033942.01.T01 AT1G55290 30.938 320 193 9 51 360 37 338 3.35e-43 154
MsG0680033942.01.T01 AT5G08640 31.562 320 199 7 48 360 16 322 1.27e-42 152
MsG0680033942.01.T01 AT5G08640 31.562 320 199 7 48 360 16 322 1.27e-42 152
MsG0680033942.01.T01 AT1G15550 31.270 307 188 4 71 371 56 345 1.58e-42 152
MsG0680033942.01.T01 AT5G20400 31.329 316 205 5 67 380 40 345 1.89e-42 152
MsG0680033942.01.T01 AT3G19010 33.123 317 176 9 66 379 23 306 3.34e-42 150
MsG0680033942.01.T01 AT1G17020 30.921 304 195 7 50 347 28 322 4.33e-42 151
MsG0680033942.01.T01 AT1G80330 29.429 350 210 7 50 381 18 348 6.61e-42 150
MsG0680033942.01.T01 AT1G49390 30.696 316 207 6 67 380 40 345 7.98e-42 150
MsG0680033942.01.T01 AT2G36690 31.098 328 201 7 51 366 32 346 8.95e-42 150
MsG0680033942.01.T01 AT2G36690 31.098 328 201 7 51 366 32 346 8.95e-42 150
MsG0680033942.01.T01 AT4G22880 30.655 336 202 7 49 365 16 339 4.26e-41 149
MsG0680033942.01.T01 AT4G22880 30.655 336 202 7 49 365 16 339 4.26e-41 149
MsG0680033942.01.T01 AT4G22880 30.655 336 202 7 49 365 16 339 4.26e-41 149
MsG0680033942.01.T01 AT1G80340 27.515 338 220 6 50 379 26 346 8.43e-40 145
MsG0680033942.01.T01 AT3G19010 36.290 248 135 8 66 300 23 260 1.66e-39 143
MsG0680033942.01.T01 AT1G78550 32.645 242 155 4 107 347 8 242 2.06e-38 139
MsG0680033942.01.T01 AT1G17010 31.541 279 180 6 71 347 53 322 2.08e-38 141
MsG0680033942.01.T01 AT5G20550 30.671 313 201 8 51 355 19 323 4.95e-38 140
MsG0680033942.01.T01 AT4G21690 29.377 337 203 7 48 371 26 340 1.19e-37 139
MsG0680033942.01.T01 AT5G63590 30.693 303 187 7 66 358 8 297 1.44e-37 138
MsG0680033942.01.T01 AT1G03410 32.215 298 182 8 69 359 54 338 1.95e-37 139
MsG0680033942.01.T01 AT1G50960 31.698 265 170 3 70 334 38 291 2.63e-37 138
MsG0680033942.01.T01 AT5G54000 31.271 291 190 5 67 355 41 323 3.49e-37 138
MsG0680033942.01.T01 AT1G78440 28.173 323 202 10 72 383 18 321 6.62e-37 137
MsG0680033942.01.T01 AT1G03410 32.215 298 182 8 69 359 91 375 6.66e-37 138
MsG0680033942.01.T01 AT3G60290 28.529 340 226 8 50 383 26 354 2.24e-36 136
MsG0680033942.01.T01 AT1G49390 30.545 275 180 5 108 380 1 266 2.82e-36 133
MsG0680033942.01.T01 AT1G06620 32.095 296 183 6 69 359 59 341 1.16e-35 134
MsG0680033942.01.T01 AT4G25300 31.295 278 180 6 72 347 52 320 2.34e-35 133
MsG0680033942.01.T01 AT4G23340 34.767 279 162 8 98 368 30 296 4.99e-35 132
MsG0680033942.01.T01 AT2G30840 32.686 309 184 11 72 373 57 348 6.14e-35 132
MsG0680033942.01.T01 AT5G05600 33.074 257 159 6 50 300 37 286 6.37e-35 130
MsG0680033942.01.T01 AT1G30040 29.167 312 185 10 62 360 21 309 6.59e-35 132
MsG0680033942.01.T01 AT3G19000 31.600 250 160 4 71 312 31 277 1.47e-34 129
MsG0680033942.01.T01 AT4G25310 32.540 252 158 5 98 347 76 317 1.56e-34 131
MsG0680033942.01.T01 AT3G12900 31.962 316 170 11 50 347 32 320 1.65e-34 131
MsG0680033942.01.T01 AT5G63600 29.825 285 181 7 70 352 31 298 2.02e-34 130
MsG0680033942.01.T01 AT1G06645 32.082 293 180 5 72 359 77 355 4.56e-34 130
MsG0680033942.01.T01 AT5G07480 28.693 352 226 9 30 370 3 340 7.58e-34 129
MsG0680033942.01.T01 AT5G43440 31.193 327 191 8 51 361 35 343 9.82e-34 129
MsG0680033942.01.T01 AT5G54000 32.000 250 161 4 108 355 1 243 1.27e-33 126
MsG0680033942.01.T01 AT1G03400 30.921 304 180 7 70 367 54 333 1.29e-33 128
MsG0680033942.01.T01 AT3G51240 34.862 218 133 3 127 342 8 218 2.33e-33 126
MsG0680033942.01.T01 AT1G47990 29.503 322 175 10 71 371 14 304 3.62e-33 126
MsG0680033942.01.T01 AT2G44800 27.434 339 229 7 51 383 27 354 4.12e-33 127
MsG0680033942.01.T01 AT5G63600 29.720 286 181 8 70 352 31 299 6.97e-33 126
MsG0680033942.01.T01 AT3G55970 30.855 269 152 7 51 300 25 278 1.17e-32 124
MsG0680033942.01.T01 AT5G59530 27.976 336 214 9 51 375 35 353 1.35e-32 126
MsG0680033942.01.T01 AT4G16330 29.352 293 185 6 76 360 63 341 3.16e-32 125
MsG0680033942.01.T01 AT5G59540 29.180 305 198 7 61 359 50 342 3.44e-32 125
MsG0680033942.01.T01 AT3G61400 30.183 328 201 11 62 377 51 362 4.38e-32 124
MsG0680033942.01.T01 AT5G43450 30.537 298 185 7 70 361 59 340 1.14e-31 123
MsG0680033942.01.T01 AT2G30840 32.362 309 179 12 72 373 57 342 1.17e-31 123
MsG0680033942.01.T01 AT2G30830 28.247 308 202 6 70 373 52 344 2.07e-31 122
MsG0680033942.01.T01 AT1G77330 28.094 299 190 7 70 360 1 282 3.37e-31 121
MsG0680033942.01.T01 AT1G06650 30.743 296 183 7 72 359 64 345 7.08e-31 121
MsG0680033942.01.T01 AT5G63595 28.716 296 160 7 59 341 6 263 7.88e-31 119
MsG0680033942.01.T01 AT5G43935 30.255 314 171 10 72 378 19 291 1.97e-30 118
MsG0680033942.01.T01 AT1G04350 27.647 340 216 10 47 375 29 349 2.19e-30 120
MsG0680033942.01.T01 AT1G06640 29.932 294 188 6 72 359 64 345 4.95e-30 119
MsG0680033942.01.T01 AT1G62380 28.188 298 179 10 73 360 8 280 1.71e-29 116
MsG0680033942.01.T01 AT1G06620 33.193 238 144 5 69 304 59 283 2.20e-29 115
MsG0680033942.01.T01 AT2G30840 32.911 237 142 6 72 304 57 280 8.63e-29 114
MsG0680033942.01.T01 AT1G04380 28.754 313 189 8 59 361 35 323 1.39e-28 114
MsG0680033942.01.T01 AT2G19590 28.772 285 177 8 69 347 8 272 1.78e-28 113
MsG0680033942.01.T01 AT1G02400 30.448 335 196 12 62 381 14 326 2.28e-28 114
MsG0680033942.01.T01 AT4G23340 39.106 179 101 5 200 370 2 180 2.43e-28 110
MsG0680033942.01.T01 AT1G03400 28.313 332 180 8 70 367 54 361 4.80e-28 114
MsG0680033942.01.T01 AT1G12010 27.852 298 180 9 73 360 8 280 1.67e-27 111
MsG0680033942.01.T01 AT2G34555 28.041 296 188 8 72 360 27 304 1.78e-27 111
MsG0680033942.01.T01 AT5G12270 28.889 315 183 9 50 347 32 322 5.38e-27 110
MsG0680033942.01.T01 AT2G25450 28.475 295 191 7 72 359 55 336 6.86e-27 110
MsG0680033942.01.T01 AT4G16330 34.132 167 106 1 194 360 73 235 1.74e-26 107
MsG0680033942.01.T01 AT5G51310 28.274 336 201 11 70 383 3 320 2.35e-26 108
MsG0680033942.01.T01 AT1G05010 28.521 284 175 8 73 348 5 268 2.95e-26 107
MsG0680033942.01.T01 AT5G43440 31.227 269 154 7 51 306 35 285 1.11e-25 105
MsG0680033942.01.T01 AT1G52820 27.586 319 213 9 70 384 10 314 1.43e-25 105
MsG0680033942.01.T01 AT3G61400 31.174 247 149 8 62 300 51 284 1.95e-24 102
MsG0680033942.01.T01 AT1G06650 31.330 233 142 5 72 300 64 282 2.16e-24 102
MsG0680033942.01.T01 AT5G43450 29.958 237 149 5 70 304 59 280 5.15e-24 100
MsG0680033942.01.T01 AT4G25300 36.310 168 103 3 182 347 61 226 5.51e-24 100
MsG0680033942.01.T01 AT1G06640 29.461 241 156 4 72 310 64 292 7.44e-24 101
MsG0680033942.01.T01 AT5G59540 28.807 243 158 6 61 300 50 280 2.23e-23 99.0
MsG0680033942.01.T01 AT5G07480 33.333 183 114 3 195 370 50 231 2.24e-23 98.2
MsG0680033942.01.T01 AT1G06640 29.870 231 148 4 72 300 64 282 2.25e-23 99.4
MsG0680033942.01.T01 AT5G58660 23.649 296 187 7 69 340 31 311 5.71e-23 99.4
MsG0680033942.01.T01 AT4G03070 28.197 305 194 10 90 384 33 322 2.62e-22 97.1
MsG0680033942.01.T01 AT3G46500 29.545 308 193 11 60 356 7 301 3.67e-22 96.7
MsG0680033942.01.T01 AT1G30040 28.740 254 145 10 62 302 21 251 6.28e-22 94.7
MsG0680033942.01.T01 AT2G19590 28.514 249 155 7 105 347 26 257 9.39e-22 94.7
MsG0680033942.01.T01 AT5G63580 31.646 237 143 7 72 304 19 240 1.62e-20 90.5
MsG0680033942.01.T01 AT3G49620 28.364 275 179 9 72 331 34 305 1.94e-20 92.0
MsG0680033942.01.T01 AT3G50210 28.283 297 178 10 72 342 8 295 4.28e-20 90.9
MsG0680033942.01.T01 AT3G50210 28.283 297 178 10 72 342 8 295 4.28e-20 90.9
MsG0680033942.01.T01 AT3G50210 28.283 297 178 10 72 342 8 295 4.28e-20 90.9
MsG0680033942.01.T01 AT5G63580 31.224 237 144 7 72 304 19 240 5.40e-20 88.6
MsG0680033942.01.T01 AT1G14130 30.943 265 164 7 95 355 26 275 7.11e-20 89.7
MsG0680033942.01.T01 AT1G04380 28.125 256 152 8 59 307 35 265 7.78e-20 89.0
MsG0680033942.01.T01 AT1G52800 26.984 315 212 9 72 381 10 311 6.63e-19 87.0
MsG0680033942.01.T01 AT4G25310 27.092 251 145 5 98 347 76 289 7.74e-19 87.0
MsG0680033942.01.T01 AT1G80320 26.978 278 191 6 95 370 33 300 1.88e-18 85.9
MsG0680033942.01.T01 AT3G46490 26.568 271 181 8 90 344 29 297 2.76e-18 85.5
MsG0680033942.01.T01 AT3G49630 26.923 286 191 9 72 342 9 291 3.58e-18 85.1
MsG0680033942.01.T01 AT3G46500 27.719 285 184 9 60 334 7 279 6.08e-18 84.0
MsG0680033942.01.T01 AT3G49630 27.376 263 177 8 91 342 28 287 9.06e-18 84.0
MsG0680033942.01.T01 AT3G47190 23.188 276 192 6 69 337 29 291 1.42e-17 83.6
MsG0680033942.01.T01 AT1G14120 31.086 267 161 11 95 355 25 274 3.14e-16 79.3
MsG0680033942.01.T01 AT1G14120 31.086 267 161 11 95 355 25 274 3.14e-16 79.3
MsG0680033942.01.T01 AT1G14120 31.086 267 161 11 95 355 25 274 3.14e-16 79.3
MsG0680033942.01.T01 AT3G46490 25.969 258 174 7 90 332 29 284 4.32e-16 79.0
MsG0680033942.01.T01 AT1G28030 27.358 318 210 11 70 378 11 316 1.08e-15 77.8
MsG0680033942.01.T01 AT4G22870 42.553 94 53 1 273 365 2 95 1.39e-15 72.8
MsG0680033942.01.T01 AT3G46500 34.940 166 97 6 200 356 2 165 1.40e-15 75.1
MsG0680033942.01.T01 AT1G52790 28.344 314 196 13 67 374 5 295 1.66e-15 77.0
MsG0680033942.01.T01 AT3G46500 34.940 166 97 6 200 356 64 227 2.64e-15 75.5
MsG0680033942.01.T01 AT3G46500 34.940 166 97 6 200 356 64 227 2.64e-15 75.5
MsG0680033942.01.T01 AT1G35190 28.947 266 171 8 95 344 29 292 5.20e-15 75.9
MsG0680033942.01.T01 AT3G50210 35.714 168 93 6 186 342 50 213 6.91e-15 74.3
MsG0680033942.01.T01 AT1G02400 28.794 257 152 9 62 306 14 251 1.22e-14 73.9
MsG0680033942.01.T01 AT5G58660 20.784 255 164 6 69 300 31 270 6.72e-14 72.0
MsG0680033942.01.T01 AT4G22870 40.449 89 52 1 278 365 48 136 1.14e-12 65.9
MsG0680033942.01.T01 AT1G15540 24.490 294 205 9 95 381 33 316 1.35e-12 68.6
MsG0680033942.01.T01 AT1G15540 24.490 294 205 9 95 381 33 316 1.35e-12 68.6
MsG0680033942.01.T01 AT1G15540 24.490 294 205 9 95 381 36 319 1.48e-12 68.6
MsG0680033942.01.T01 AT1G15540 24.490 294 205 9 95 381 40 323 1.60e-12 68.6
MsG0680033942.01.T01 AT3G49630 31.056 161 107 4 185 342 59 218 1.83e-12 67.4
MsG0680033942.01.T01 AT4G16765 29.386 228 130 9 148 352 15 234 7.88e-11 62.4

Find 57 sgRNAs with CRISPR-Local

Find 312 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCATTGAAATTTGGCTTAA+TGG 0.150676 6:-77104018 None:intergenic
ACAACAAAAGCATTGAAATT+TGG 0.179316 6:-77104026 None:intergenic
GGGAAGTCTTACACATATTT+AGG 0.213371 6:-77099854 None:intergenic
CAAACCACCTTATCACCTTT+TGG 0.237536 6:-77104414 None:intergenic
TACACTTTCTTTGGGGATAA+TGG 0.242492 6:+77103782 MsG0680033942.01.T01:CDS
AGCAATGAGTACACTTTCTT+TGG 0.256813 6:+77103773 MsG0680033942.01.T01:CDS
ACTACCTTTGCAACACATTA+GGG 0.259620 6:+77103593 MsG0680033942.01.T01:CDS
TCATTGCTTCACAATACTTT+TGG 0.297778 6:-77103758 None:intergenic
ATGCATGGTTTCTCTTCATC+TGG 0.315343 6:-77103220 None:intergenic
TCTGGCCAAATGAATTGTTT+TGG 0.316211 6:-77103202 None:intergenic
GACTACCTTTGCAACACATT+AGG 0.329416 6:+77103592 MsG0680033942.01.T01:CDS
TTGGGGATAATGGAGCTTCT+TGG 0.334961 6:+77103792 MsG0680033942.01.T01:CDS
ACCTTCCAAAACAATTCATT+TGG 0.350752 6:+77103197 MsG0680033942.01.T01:CDS
GCAATGAGTACACTTTCTTT+GGG 0.358257 6:+77103774 MsG0680033942.01.T01:CDS
CAATATTGGCGACACTTTCA+TGG 0.365740 6:+77104049 MsG0680033942.01.T01:CDS
CAGAGAGCTCAGAGGAAAAC+AGG 0.369073 6:+77103454 MsG0680033942.01.T01:CDS
TTTGTTTAGGCTCTTTCAAA+TGG 0.375899 6:+77104315 MsG0680033942.01.T01:intron
AGCATAGGCCATGTAAAATC+AGG 0.403623 6:-77104480 None:intergenic
GTAAAATCAGGATAGATTCT+TGG 0.424005 6:-77104468 None:intergenic
TTTGTGTCCAAAAGGTGATA+AGG 0.428349 6:+77104407 MsG0680033942.01.T01:CDS
CCTGATCTTACATTAGGAAC+TGG 0.432219 6:+77103909 MsG0680033942.01.T01:CDS
GAAGCTTCCATTGCAGCAAA+AGG 0.437196 6:-77103301 None:intergenic
AAAGAAAGTGTTTCTTTCCA+TGG 0.452336 6:-77103529 None:intergenic
GATACAAGAGTTGTTTACAT+AGG 0.453161 6:+77104340 MsG0680033942.01.T01:CDS
AACTTGGTCTTGGTGTAGAA+TGG 0.455121 6:-77103958 None:intergenic
GAGCTTCTTGGAATGAGCCT+TGG 0.458792 6:+77103804 MsG0680033942.01.T01:CDS
ATGAGTGGAACATCAAGTTC+AGG 0.460730 6:-77103250 None:intergenic
TGTAGAATGGTTAAAGATGT+TGG 0.464593 6:-77103945 None:intergenic
CCAGTTCCTAATGTAAGATC+AGG 0.466085 6:-77103909 None:intergenic
GCAAGCCACCAACTTGGTCT+TGG 0.476525 6:-77103968 None:intergenic
GATTCTCCTCAAAACTTCCA+TGG 0.481259 6:+77103512 MsG0680033942.01.T01:CDS
CAGCAAAAGGGTCACCAGTA+AGG 0.488573 6:-77103288 None:intergenic
AAGAGAACAAATCAATAATG+AGG 0.489139 6:+77103859 MsG0680033942.01.T01:CDS
GGTTATGCTAGTAGTTTCAC+TGG 0.493776 6:+77103487 MsG0680033942.01.T01:CDS
GGTTTGTCCACCAAGTGAAT+TGG 0.495340 6:+77104431 MsG0680033942.01.T01:CDS
TTGTTTAGGCTCTTTCAAAT+GGG 0.498547 6:+77104316 MsG0680033942.01.T01:intron
CTTGGAATGAGCCTTGGAGT+TGG 0.502170 6:+77103810 MsG0680033942.01.T01:CDS
ATACAAGAGTTGTTTACATA+GGG 0.513999 6:+77104341 MsG0680033942.01.T01:CDS
AAGCTTCCATTGCAGCAAAA+GGG 0.519537 6:-77103300 None:intergenic
TCACTCACCAATTCACTTGG+TGG 0.539875 6:-77104438 None:intergenic
AAACTTGCAAGCCACCAACT+TGG 0.541541 6:-77103974 None:intergenic
TGAGTGAACTCAAGAAGCAT+AGG 0.552038 6:-77104495 None:intergenic
AGTTCAGGTATATTCATGCA+TGG 0.576121 6:-77103235 None:intergenic
ACAACATGCTCATAGTTACA+TGG 0.578987 6:+77103399 MsG0680033942.01.T01:CDS
CTACACCAAGACCAAGTTGG+TGG 0.579991 6:+77103963 MsG0680033942.01.T01:CDS
GTGTCCAAAAGGTGATAAGG+TGG 0.588202 6:+77104410 MsG0680033942.01.T01:CDS
CAATGAGTACACTTTCTTTG+GGG 0.589640 6:+77103775 MsG0680033942.01.T01:CDS
CTTCCCCTAATGTGTTGCAA+AGG 0.590219 6:-77103597 None:intergenic
GAGTTGTTTACATAGGGCAG+TGG 0.591957 6:+77104347 MsG0680033942.01.T01:CDS
CATGCTCATAGTTACATGGA+TGG 0.592407 6:+77103403 MsG0680033942.01.T01:CDS
ATTCTACACCAAGACCAAGT+TGG 0.596720 6:+77103960 MsG0680033942.01.T01:CDS
AAATAGGAATGTTACGGACA+AGG 0.606656 6:+77099822 None:intergenic
AAATCACTCACCAATTCACT+TGG 0.609488 6:-77104441 None:intergenic
AGCTGATATGAGAACACTTG+AGG 0.634082 6:+77104530 MsG0680033942.01.T01:CDS
CTACCTTTGCAACACATTAG+GGG 0.635822 6:+77103594 MsG0680033942.01.T01:CDS
AAAGATGTTGGATCACAATG+AGG 0.661856 6:-77103933 None:intergenic
AGGAAAACAGGAGAACATTG+TGG 0.683029 6:+77103466 MsG0680033942.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTAATTTAATTTATATA+GGG + Chr6:77103728-77103747 MsG0680033942.01.T01:intron 0.0%
!!! TTTTTTAATTTAATTTATAT+AGG + Chr6:77103727-77103746 MsG0680033942.01.T01:intron 0.0%
!! AAAAGAAATATTTAACAAAA+GGG + Chr6:77104229-77104248 MsG0680033942.01.T01:intron 10.0%
!! CTAGTTATAATAATTTATAA+TGG - Chr6:77103036-77103055 None:intergenic 10.0%
!! TAAAAGAAATATTTAACAAA+AGG + Chr6:77104228-77104247 MsG0680033942.01.T01:intron 10.0%
!!! TTTTAGTAAAATTATTTTAG+AGG + Chr6:77102149-77102168 MsG0680033942.01.T01:intron 10.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + Chr6:77100436-77100455 MsG0680033942.01.T01:intron 100.0%
!! AAAAAACTTGCATTATATAT+AGG - Chr6:77102951-77102970 None:intergenic 15.0%
!! AATTGTAACTTCTTAAATTA+CGG + Chr6:77101585-77101604 MsG0680033942.01.T01:intron 15.0%
!! ATAGTTAAAACAAACTTAAA+AGG + Chr6:77102074-77102093 MsG0680033942.01.T01:intron 15.0%
!! GTTAAAATTCCTAAATAAAA+CGG + Chr6:77099897-77099916 MsG0680033942.01.T01:intron 15.0%
!! TAACAAATTAAGATTGAATT+AGG + Chr6:77102534-77102553 MsG0680033942.01.T01:intron 15.0%
!! TATAATAATCTTAAAAGAGT+TGG - Chr6:77102793-77102812 None:intergenic 15.0%
!!! AAATTTTTTAAATCAATGAG+TGG - Chr6:77103268-77103287 None:intergenic 15.0%
!!! ATTTTATTACAATACAAGTT+AGG + Chr6:77100680-77100699 MsG0680033942.01.T01:intron 15.0%
!!! GATAAACTTTTTTTATTTGT+TGG + Chr6:77101321-77101340 MsG0680033942.01.T01:intron 15.0%
!!! TTAATTTAATTTATATAGGG+AGG + Chr6:77103731-77103750 MsG0680033942.01.T01:intron 15.0%
!! AATTTAAGAAGTTACAATTG+CGG - Chr6:77101584-77101603 None:intergenic 20.0%
!! AGGAATTTAAACGTATTATT+TGG - Chr6:77099932-77099951 None:intergenic 20.0%
!! ATTGAAACAAAGAAATGATA+CGG + Chr6:77101114-77101133 MsG0680033942.01.T01:intron 20.0%
!! GAACAACCATATATAAAATA+AGG + Chr6:77100465-77100484 MsG0680033942.01.T01:intron 20.0%
!! GATATTAAAAATGAAAGACT+CGG + Chr6:77102486-77102505 MsG0680033942.01.T01:intron 20.0%
!! GATTTAAAAAATTTCCTTAC+TGG + Chr6:77103274-77103293 MsG0680033942.01.T01:CDS 20.0%
!! GGAATTTAAACGTATTATTT+GGG - Chr6:77099931-77099950 None:intergenic 20.0%
!! TAATACGTTTAAATTCCTAA+AGG + Chr6:77099934-77099953 MsG0680033942.01.T01:intron 20.0%
!! TATAAGATAATTTATCAGAG+AGG - Chr6:77102655-77102674 None:intergenic 20.0%
!! TTATAATGCATCATTACTTA+TGG - Chr6:77100851-77100870 None:intergenic 20.0%
!!! AAGGTTTGATTTAAGAAATT+TGG - Chr6:77101655-77101674 None:intergenic 20.0%
!!! AATGAGCCTTATTTTATATA+TGG - Chr6:77100474-77100493 None:intergenic 20.0%
!!! ATTTTTACTATGGTTTGTTT+TGG - Chr6:77103122-77103141 None:intergenic 20.0%
!!! ATTTTTTACTACGAGATTTT+AGG - Chr6:77100107-77100126 None:intergenic 20.0%
!!! CTTTTAATCGAATCTAATTA+TGG + Chr6:77101525-77101544 MsG0680033942.01.T01:intron 20.0%
!!! TATTTTAGTACATAACACAA+AGG - Chr6:77103704-77103723 None:intergenic 20.0%
!!! TGATCTAATATGTTTCATTT+TGG - Chr6:77102199-77102218 None:intergenic 20.0%
!!! TTTTTTACTACGAGATTTTA+GGG - Chr6:77100106-77100125 None:intergenic 20.0%
!!! TTTTTTCACTCTATTTGTTT+AGG + Chr6:77104302-77104321 MsG0680033942.01.T01:intron 20.0%
! AAAGTTCAATGATTGTTAGA+AGG + Chr6:77100652-77100671 MsG0680033942.01.T01:intron 25.0%
! AAGAGAACAAATCAATAATG+AGG + Chr6:77103859-77103878 MsG0680033942.01.T01:CDS 25.0%
! ACAAGGAATTTACTAAAGTT+TGG - Chr6:77101490-77101509 None:intergenic 25.0%
! ACCATCATACATAAAATATG+TGG - Chr6:77104268-77104287 None:intergenic 25.0%
! AGACATAACATGAATGATAA+AGG + Chr6:77100618-77100637 MsG0680033942.01.T01:intron 25.0%
! AGATATTACCTTAGAAAACA+AGG - Chr6:77101507-77101526 None:intergenic 25.0%
! ATACAAGAGTTGTTTACATA+GGG + Chr6:77104341-77104360 MsG0680033942.01.T01:CDS 25.0%
! ATTTCCCACTAATATATCAT+AGG + Chr6:77101622-77101641 MsG0680033942.01.T01:intron 25.0%
! CTTATAAACCTAATAAAGAG+AGG - Chr6:77101302-77101321 None:intergenic 25.0%
! GAATCTAATTATGGTTGTTA+GGG + Chr6:77101534-77101553 MsG0680033942.01.T01:intron 25.0%
! GAATTTACTAAAGTTTGGTT+CGG - Chr6:77101485-77101504 None:intergenic 25.0%
! TGTCTTTAAACCTTCATTAA+AGG - Chr6:77102625-77102644 None:intergenic 25.0%
! TGTCTTTAATTAACTAAGCT+TGG - Chr6:77102760-77102779 None:intergenic 25.0%
! TTGAAACAAAGAAATGATAC+GGG + Chr6:77101115-77101134 MsG0680033942.01.T01:intron 25.0%
! TTTATCGTTTCCTTTAATGA+AGG + Chr6:77102612-77102631 MsG0680033942.01.T01:intron 25.0%
! TTTCCCACTAATATATCATA+GGG + Chr6:77101623-77101642 MsG0680033942.01.T01:intron 25.0%
!! AGTTTTTCTCATCAGAAAAT+TGG - Chr6:77103555-77103574 None:intergenic 25.0%
!! TTTTTGATGCTTCATTTCTA+AGG + Chr6:77103164-77103183 MsG0680033942.01.T01:CDS 25.0%
!!! AATGCTTTTGTTGTCAATAT+TGG + Chr6:77104035-77104054 MsG0680033942.01.T01:CDS 25.0%
!!! ACAACAAAAGCATTGAAATT+TGG - Chr6:77104029-77104048 None:intergenic 25.0%
!!! ACACTTTTGAAAGTTTTCAT+TGG + Chr6:77104096-77104115 MsG0680033942.01.T01:intron 25.0%
!!! AGTAAATTCCTTGTTTTCTA+AGG + Chr6:77101496-77101515 MsG0680033942.01.T01:intron 25.0%
!!! ATTTAGGATTTTGAACCTTT+AGG - Chr6:77099952-77099971 None:intergenic 25.0%
!!! CTATTGTTTTGTAATGATGT+TGG + Chr6:77101258-77101277 MsG0680033942.01.T01:intron 25.0%
!!! CTTCATCTTCATTTTTACTA+TGG - Chr6:77103132-77103151 None:intergenic 25.0%
!!! GAATTTCAACCGTTTTATTT+AGG - Chr6:77099909-77099928 None:intergenic 25.0%
!!! GATGATCTTCTTTTATTTGT+TGG + Chr6:77100909-77100928 MsG0680033942.01.T01:intron 25.0%
!!! TATCAATGTTTTTCAACCAT+CGG + Chr6:77101411-77101430 MsG0680033942.01.T01:intron 25.0%
!!! TCTTCTGTTGTGTTATTTTT+TGG - Chr6:77102295-77102314 None:intergenic 25.0%
!!! TTTTTTCTTGTTGTGAATCA+TGG + Chr6:77103358-77103377 MsG0680033942.01.T01:CDS 25.0%
AAATGGATCCAACAAAAAAG+TGG + Chr6:77104561-77104580 MsG0680033942.01.T01:CDS 30.0%
ACACTAACTTTGTATCTTGT+TGG - Chr6:77102266-77102285 None:intergenic 30.0%
ACATATTAGATCACCAAAAG+TGG + Chr6:77102206-77102225 MsG0680033942.01.T01:intron 30.0%
ACCTTCCAAAACAATTCATT+TGG + Chr6:77103197-77103216 MsG0680033942.01.T01:CDS 30.0%
AGTGAGTAAATCGTGTAAAT+CGG + Chr6:77100588-77100607 MsG0680033942.01.T01:intron 30.0%
ATAAGAAAATTGCTACTGTC+AGG - Chr6:77101060-77101079 None:intergenic 30.0%
ATACTAGAAACAAAGTTCGT+CGG + Chr6:77100070-77100089 MsG0680033942.01.T01:intron 30.0%
ATGACCCTATGATATATTAG+TGG - Chr6:77101630-77101649 None:intergenic 30.0%
ATGGAAGCTTCAAAAATCAT+TGG + Chr6:77103313-77103332 MsG0680033942.01.T01:CDS 30.0%
CAAAAACCTGATCTTACATT+AGG + Chr6:77103903-77103922 MsG0680033942.01.T01:CDS 30.0%
CAACTAAACCTCTCTTTATT+AGG + Chr6:77101291-77101310 MsG0680033942.01.T01:intron 30.0%
CACTAACTTTGTATCTTGTT+GGG - Chr6:77102265-77102284 None:intergenic 30.0%
CATTATCTGCTAAATGATTC+AGG + Chr6:77102438-77102457 MsG0680033942.01.T01:intron 30.0%
CGAATCTAATTATGGTTGTT+AGG + Chr6:77101533-77101552 MsG0680033942.01.T01:intron 30.0%
CTAAATATAGATTCCCACAA+CGG + Chr6:77099966-77099985 MsG0680033942.01.T01:intron 30.0%
GAATTTAAACAGACGAATGA+CGG - Chr6:77102464-77102483 None:intergenic 30.0%
GATACAAGAGTTGTTTACAT+AGG + Chr6:77104340-77104359 MsG0680033942.01.T01:CDS 30.0%
GATTTGATTCAGGTGTTTAA+AGG - Chr6:77101162-77101181 None:intergenic 30.0%
GTAAAATCAGGATAGATTCT+TGG - Chr6:77104471-77104490 None:intergenic 30.0%
TATGTGTATGATTCACTTAC+TGG + Chr6:77102873-77102892 MsG0680033942.01.T01:intron 30.0%
TCAAACTTATGTCTTTCTCT+TGG - Chr6:77102418-77102437 None:intergenic 30.0%
TGAAACAAAGAAATGATACG+GGG + Chr6:77101116-77101135 MsG0680033942.01.T01:intron 30.0%
TGACCCTATGATATATTAGT+GGG - Chr6:77101629-77101648 None:intergenic 30.0%
TGTAGAATGGTTAAAGATGT+TGG - Chr6:77103948-77103967 None:intergenic 30.0%
TTGTTTAGGCTCTTTCAAAT+GGG + Chr6:77104316-77104335 MsG0680033942.01.T01:intron 30.0%
TTTGTTTAGGCTCTTTCAAA+TGG + Chr6:77104315-77104334 MsG0680033942.01.T01:intron 30.0%
! AACAAAAGGGTCATGAATTT+TGG + Chr6:77104242-77104261 MsG0680033942.01.T01:intron 30.0%
! AAGTTTTTGTTGACAATGAG+TGG + Chr6:77103991-77104010 MsG0680033942.01.T01:CDS 30.0%
! AATTTATAATGGAGAGAGAG+AGG - Chr6:77103025-77103044 None:intergenic 30.0%
! AGCATTGAAATTTGGCTTAA+TGG - Chr6:77104021-77104040 None:intergenic 30.0%
! GAATCTATCCTGATTTTACA+TGG + Chr6:77104472-77104491 MsG0680033942.01.T01:CDS 30.0%
! GAGTTCAGAGATAGTTTTTA+AGG - Chr6:77100518-77100537 None:intergenic 30.0%
! GCCACATATTTTATGTATGA+TGG + Chr6:77104264-77104283 MsG0680033942.01.T01:intron 30.0%
! GTTTTGCATTGTTAATGCAA+TGG + Chr6:77103055-77103074 MsG0680033942.01.T01:intron 30.0%
! TCATTGCTTCACAATACTTT+TGG - Chr6:77103761-77103780 None:intergenic 30.0%
! TTGCATGATTTGGGAAAAAA+AGG - Chr6:77100544-77100563 None:intergenic 30.0%
!! AAAGAAAGTGTTTCTTTCCA+TGG - Chr6:77103532-77103551 None:intergenic 30.0%
!! TCAGTTTTGCTTGTTTTCTA+AGG + Chr6:77100789-77100808 MsG0680033942.01.T01:intron 30.0%
!!! AGATCCTCATTTAGTTTTTC+AGG - Chr6:77100253-77100272 None:intergenic 30.0%
!!! AGGGTTTTGATTCATCTTTA+AGG + Chr6:77101553-77101572 MsG0680033942.01.T01:intron 30.0%
!!! GAATTGTTTTGGAAGGTTAA+TGG - Chr6:77103194-77103213 None:intergenic 30.0%
!!! GGGTTTTGATTCATCTTTAA+GGG + Chr6:77101554-77101573 MsG0680033942.01.T01:intron 30.0%
!!! TTTTGCTTGTTTTCTAAGGT+GGG + Chr6:77100793-77100812 MsG0680033942.01.T01:intron 30.0%
AAAATTCATCCCAAGTTCCA+AGG + Chr6:77100704-77100723 MsG0680033942.01.T01:intron 35.0%
AAAGATGTTGGATCACAATG+AGG - Chr6:77103936-77103955 None:intergenic 35.0%
AAATCACTCACCAATTCACT+TGG - Chr6:77104444-77104463 None:intergenic 35.0%
AAGCATGAGTCCTTTGTAAA+GGG - Chr6:77100416-77100435 None:intergenic 35.0%
ACAACATGCTCATAGTTACA+TGG + Chr6:77103399-77103418 MsG0680033942.01.T01:CDS 35.0%
ACCTATGAAGTTGCATGATT+TGG - Chr6:77100554-77100573 None:intergenic 35.0%
ACTACCTTTGCAACACATTA+GGG + Chr6:77103593-77103612 MsG0680033942.01.T01:CDS 35.0%
AGAGAAAACAAGAGATCAAG+TGG - Chr6:77101226-77101245 None:intergenic 35.0%
AGCAATGAGTACACTTTCTT+TGG + Chr6:77103773-77103792 MsG0680033942.01.T01:CDS 35.0%
AGTTCAGGTATATTCATGCA+TGG - Chr6:77103238-77103257 None:intergenic 35.0%
AGTTCTCAAGTTCTTTCTCT+TGG - Chr6:77100296-77100315 None:intergenic 35.0%
ATATCATTAAGCTCTGTTCC+TGG + Chr6:77102039-77102058 MsG0680033942.01.T01:intron 35.0%
ATCGCCTGAAAAACTAAATG+AGG + Chr6:77100246-77100265 MsG0680033942.01.T01:intron 35.0%
ATGTCTAAGAACAGAGCTTA+TGG - Chr6:77102021-77102040 None:intergenic 35.0%
CAACCAAATGTCCTTGATTA+GGG + Chr6:77100880-77100899 MsG0680033942.01.T01:intron 35.0%
CAATGAGTACACTTTCTTTG+GGG + Chr6:77103775-77103794 MsG0680033942.01.T01:CDS 35.0%
CAGGTGTTTAAAGGTGATTA+AGG - Chr6:77101153-77101172 None:intergenic 35.0%
CCTATGAAGTTGCATGATTT+GGG - Chr6:77100553-77100572 None:intergenic 35.0%
CGTTGTGGGAATCTATATTT+AGG - Chr6:77099968-77099987 None:intergenic 35.0%
CTAATCAAGGACATTTGGTT+GGG - Chr6:77100881-77100900 None:intergenic 35.0%
GCAATGAGTACACTTTCTTT+GGG + Chr6:77103774-77103793 MsG0680033942.01.T01:CDS 35.0%
GGGAAGTCTTACACATATTT+AGG - Chr6:77099857-77099876 None:intergenic 35.0%
TAACTTTGTATCTTGTTGGG+TGG - Chr6:77102262-77102281 None:intergenic 35.0%
TATGTCTTTCTCTTGGCTTA+AGG - Chr6:77102411-77102430 None:intergenic 35.0%
TCAAACCTTCTATGTAAGTG+TGG + Chr6:77101666-77101685 MsG0680033942.01.T01:intron 35.0%
TCATCTATGAACCCTAATCA+AGG - Chr6:77100894-77100913 None:intergenic 35.0%
TGCATTATATATAGGCAGAG+AGG - Chr6:77102943-77102962 None:intergenic 35.0%
TTTACAAAGGACTCATGCTT+GGG + Chr6:77100416-77100435 MsG0680033942.01.T01:intron 35.0%
TTTGTGTCCAAAAGGTGATA+AGG + Chr6:77104407-77104426 MsG0680033942.01.T01:CDS 35.0%
! CACTTGAGGCTTTTACAAAA+TGG + Chr6:77104544-77104563 MsG0680033942.01.T01:CDS 35.0%
! GCTTTCTTTTTGTGTCCAAA+AGG + Chr6:77104399-77104418 MsG0680033942.01.T01:CDS 35.0%
! GTAAGATCAGGTTTTTGACA+TGG - Chr6:77103900-77103919 None:intergenic 35.0%
! TACACTTTCTTTGGGGATAA+TGG + Chr6:77103782-77103801 MsG0680033942.01.T01:CDS 35.0%
! TCTGGCCAAATGAATTGTTT+TGG - Chr6:77103205-77103224 None:intergenic 35.0%
! TTCTTTCCATGGAAGTTTTG+AGG - Chr6:77103521-77103540 None:intergenic 35.0%
!! AGATTAGGCTGATTTGATTC+AGG - Chr6:77101172-77101191 None:intergenic 35.0%
!! AGATTTTGAGGAATTTGGGT+AGG + Chr6:77103618-77103637 MsG0680033942.01.T01:intron 35.0%
!! GGGAAGATTTTGAGGAATTT+GGG + Chr6:77103614-77103633 MsG0680033942.01.T01:CDS 35.0%
!! GTTTTGCTTGTTTTCTAAGG+TGG + Chr6:77100792-77100811 MsG0680033942.01.T01:intron 35.0%
!! TTTCGATTGACTTGATCTCT+AGG + Chr6:77101015-77101034 MsG0680033942.01.T01:intron 35.0%
!!! AGGTTATGTGTCGTTTTCTT+TGG - Chr6:77100207-77100226 None:intergenic 35.0%
!!! GCCAAATGAATTGTTTTGGA+AGG - Chr6:77103201-77103220 None:intergenic 35.0%
!!! GGTTATGTGTCGTTTTCTTT+GGG - Chr6:77100206-77100225 None:intergenic 35.0%
!!! TCTCTTGTTTTCTCTAGAGA+TGG + Chr6:77101231-77101250 MsG0680033942.01.T01:intron 35.0%
AAGCTTCCATTGCAGCAAAA+GGG - Chr6:77103303-77103322 None:intergenic 40.0%
AGAAATGATACGGGGATTCA+AGG + Chr6:77101124-77101143 MsG0680033942.01.T01:intron 40.0%
AGCATAGGCCATGTAAAATC+AGG - Chr6:77104483-77104502 None:intergenic 40.0%
AGCTGATATGAGAACACTTG+AGG + Chr6:77104530-77104549 MsG0680033942.01.T01:CDS 40.0%
AGGAAAACAGGAGAACATTG+TGG + Chr6:77103466-77103485 MsG0680033942.01.T01:CDS 40.0%
ATAACACCCATACACAGTAG+AGG + Chr6:77102338-77102357 MsG0680033942.01.T01:intron 40.0%
ATATACTCCACCTAGAGATC+AGG - Chr6:77101441-77101460 None:intergenic 40.0%
ATGAGTGGAACATCAAGTTC+AGG - Chr6:77103253-77103272 None:intergenic 40.0%
ATGCATGGTTTCTCTTCATC+TGG - Chr6:77103223-77103242 None:intergenic 40.0%
ATTCTACACCAAGACCAAGT+TGG + Chr6:77103960-77103979 MsG0680033942.01.T01:CDS 40.0%
CAAGCATGAGTCCTTTGTAA+AGG - Chr6:77100417-77100436 None:intergenic 40.0%
CAATATTGGCGACACTTTCA+TGG + Chr6:77104049-77104068 MsG0680033942.01.T01:CDS 40.0%
CATGCTCATAGTTACATGGA+TGG + Chr6:77103403-77103422 MsG0680033942.01.T01:CDS 40.0%
CCAAACCTTCTATGTAAGTG+TGG + Chr6:77101747-77101766 MsG0680033942.01.T01:intron 40.0%
CCAACCAAATGTCCTTGATT+AGG + Chr6:77100879-77100898 MsG0680033942.01.T01:intron 40.0%
CCACACTTACATAGAAGGTT+TGG - Chr6:77101669-77101688 None:intergenic 40.0%
CCAGTTCCTAATGTAAGATC+AGG - Chr6:77103912-77103931 None:intergenic 40.0%
CCCAAATCATGCAACTTCAT+AGG + Chr6:77100550-77100569 MsG0680033942.01.T01:intron 40.0%
CCTAATCAAGGACATTTGGT+TGG - Chr6:77100882-77100901 None:intergenic 40.0%
CCTGATCTTACATTAGGAAC+TGG + Chr6:77103909-77103928 MsG0680033942.01.T01:CDS 40.0%
CTACCTTTGCAACACATTAG+GGG + Chr6:77103594-77103613 MsG0680033942.01.T01:CDS 40.0%
CTTTACAAAGGACTCATGCT+TGG + Chr6:77100415-77100434 MsG0680033942.01.T01:intron 40.0%
GAACCCTAATCAAGGACATT+TGG - Chr6:77100886-77100905 None:intergenic 40.0%
GACTACCTTTGCAACACATT+AGG + Chr6:77103592-77103611 MsG0680033942.01.T01:CDS 40.0%
GATTCTCCTCAAAACTTCCA+TGG + Chr6:77103512-77103531 MsG0680033942.01.T01:CDS 40.0%
GGGCGGAATGACTTTAATTA+CGG - Chr6:77100339-77100358 None:intergenic 40.0%
GGTGAAGCATGTGAAAAACA+TGG + Chr6:77103334-77103353 MsG0680033942.01.T01:CDS 40.0%
GGTTATGCTAGTAGTTTCAC+TGG + Chr6:77103487-77103506 MsG0680033942.01.T01:CDS 40.0%
TAACACCCATACACAGTAGA+GGG + Chr6:77102339-77102358 MsG0680033942.01.T01:intron 40.0%
TCCAACAAAAAAGTGGCTGA+TGG + Chr6:77104568-77104587 MsG0680033942.01.T01:CDS 40.0%
TCTACTGTGTATGGGTGTTA+TGG - Chr6:77102339-77102358 None:intergenic 40.0%
TTACAAAGGACTCATGCTTG+GGG + Chr6:77100417-77100436 MsG0680033942.01.T01:intron 40.0%
TTGCTACTGTCAGGTTCATA+TGG - Chr6:77101051-77101070 None:intergenic 40.0%
! AGATCAGGTTTTTGACATGG+TGG - Chr6:77103897-77103916 None:intergenic 40.0%
! ATTGTTGATTGCTTCTACGG+TGG - Chr6:77101935-77101954 None:intergenic 40.0%
! CAAACCACCTTATCACCTTT+TGG - Chr6:77104417-77104436 None:intergenic 40.0%
! CACATTAGGGGAAGATTTTG+AGG + Chr6:77103606-77103625 MsG0680033942.01.T01:CDS 40.0%
! GATCAGGTTTTTGACATGGT+GGG - Chr6:77103896-77103915 None:intergenic 40.0%
! GCGATTGTTGATTGCTTCTA+CGG - Chr6:77101938-77101957 None:intergenic 40.0%
! TCTGAAACTCCTTGGAACTT+GGG - Chr6:77100716-77100735 None:intergenic 40.0%
! TGAGTGAACTCAAGAAGCAT+AGG - Chr6:77104498-77104517 None:intergenic 40.0%
!! AACTTGGTCTTGGTGTAGAA+TGG - Chr6:77103961-77103980 None:intergenic 40.0%
!! ACTTACTGGCTCAAACATGT+TGG + Chr6:77102887-77102906 MsG0680033942.01.T01:intron 40.0%
!! CTAAAGTTTGGTTCGGATAG+AGG - Chr6:77101478-77101497 None:intergenic 40.0%
!! GGGGAAGATTTTGAGGAATT+TGG + Chr6:77103613-77103632 MsG0680033942.01.T01:CDS 40.0%
!! TAAGGTGGGTTAGTGGAAAA+AGG + Chr6:77100807-77100826 MsG0680033942.01.T01:intron 40.0%
!! TCTCTGAGATACTGACCTTA+GGG + Chr6:77101872-77101891 MsG0680033942.01.T01:intron 40.0%
!!! AGCTCTCTGTTTTTGAGACA+GGG - Chr6:77103443-77103462 None:intergenic 40.0%
!!! TGTTTTCTAAGGTGGGTTAG+TGG + Chr6:77100800-77100819 MsG0680033942.01.T01:intron 40.0%
AAACTTGCAAGCCACCAACT+TGG - Chr6:77103977-77103996 None:intergenic 45.0%
AACTATCCAATGACCTGTCC+AGG - Chr6:77102060-77102079 None:intergenic 45.0%
AGGCTCATTGACCTTTCTAG+CGG + Chr6:77100485-77100504 MsG0680033942.01.T01:intron 45.0%
AGTGTAACTGAAGGCGAAAG+TGG + Chr6:77102376-77102395 MsG0680033942.01.T01:intron 45.0%
ATGCCTCTATGTTTCCGTTG+TGG - Chr6:77099983-77100002 None:intergenic 45.0%
ATGTGTAAGACTTCCCACGA+TGG + Chr6:77099861-77099880 MsG0680033942.01.T01:intron 45.0%
ATTAAGCTCTGTTCCTGGAC+AGG + Chr6:77102044-77102063 MsG0680033942.01.T01:intron 45.0%
CTACTGTCAGGTTCATATGG+AGG - Chr6:77101048-77101067 None:intergenic 45.0%
CTCAAAAACAGAGAGCTCAG+AGG + Chr6:77103446-77103465 MsG0680033942.01.T01:CDS 45.0%
CTTCCCCTAATGTGTTGCAA+AGG - Chr6:77103600-77103619 None:intergenic 45.0%
CTTTCTTCTGCAATCCACTC+TGG + Chr6:77101703-77101722 MsG0680033942.01.T01:intron 45.0%
GAAGCTTCCATTGCAGCAAA+AGG - Chr6:77103304-77103323 None:intergenic 45.0%
GAGTTGTTTACATAGGGCAG+TGG + Chr6:77104347-77104366 MsG0680033942.01.T01:CDS 45.0%
GCAGAAGAAAGTTGAACCAG+AGG - Chr6:77101694-77101713 None:intergenic 45.0%
GGTTTGTCCACCAAGTGAAT+TGG + Chr6:77104431-77104450 MsG0680033942.01.T01:CDS 45.0%
GTCAGGTTCATATGGAGGTA+GGG - Chr6:77101043-77101062 None:intergenic 45.0%
GTCCTTTGTAAAGGGTGAAG+TGG - Chr6:77100408-77100427 None:intergenic 45.0%
GTGTAACTGAAGGCGAAAGT+GGG + Chr6:77102377-77102396 MsG0680033942.01.T01:intron 45.0%
GTGTCCAAAAGGTGATAAGG+TGG + Chr6:77104410-77104429 MsG0680033942.01.T01:CDS 45.0%
TACAAAGGACTCATGCTTGG+GGG + Chr6:77100418-77100437 MsG0680033942.01.T01:intron 45.0%
TACTGACCTTAGGGTCAGAT+CGG + Chr6:77101881-77101900 MsG0680033942.01.T01:intron 45.0%
TATGAGATCACCATCCTGCA+TGG - Chr6:77100011-77100030 None:intergenic 45.0%
TCACTCACCAATTCACTTGG+TGG - Chr6:77104441-77104460 None:intergenic 45.0%
TGCCTCTATGTTTCCGTTGT+GGG - Chr6:77099982-77100001 None:intergenic 45.0%
TGTCAGGTTCATATGGAGGT+AGG - Chr6:77101044-77101063 None:intergenic 45.0%
TGTTCATGTGTGAACCAGAG+TGG - Chr6:77101720-77101739 None:intergenic 45.0%
TTAAAGTCATTCCGCCCTTC+AGG + Chr6:77100342-77100361 MsG0680033942.01.T01:intron 45.0%
TTCCCACAACGGAAACATAG+AGG + Chr6:77099977-77099996 MsG0680033942.01.T01:intron 45.0%
! ACGTAATCTGAGATCGTACC+TGG - Chr6:77101787-77101806 None:intergenic 45.0%
! AGGTGCCACACTTACATAGA+AGG - Chr6:77101674-77101693 None:intergenic 45.0%
! CGTAATCTGAGATCGTACCT+GGG - Chr6:77101786-77101805 None:intergenic 45.0%
! GAGTTCTTTTTGCGTCGTAC+AGG + Chr6:77101962-77101981 MsG0680033942.01.T01:intron 45.0%
! TGAAGAGTGTGCTTGCTACT+AGG - Chr6:77100227-77100246 None:intergenic 45.0%
!! AGTTTGGTTCGGATAGAGGT+AGG - Chr6:77101474-77101493 None:intergenic 45.0%
!! CATGTTGGTGACTTGCATGT+TGG + Chr6:77102902-77102921 MsG0680033942.01.T01:intron 45.0%
!! CTCTCTGAGATACTGACCTT+AGG + Chr6:77101871-77101890 MsG0680033942.01.T01:intron 45.0%
!! CTCTGAAACTCCTTGGAACT+TGG - Chr6:77100717-77100736 None:intergenic 45.0%
!! GTTTGGTTCGGATAGAGGTA+GGG - Chr6:77101473-77101492 None:intergenic 45.0%
!! TTGGGGATAATGGAGCTTCT+TGG + Chr6:77103792-77103811 MsG0680033942.01.T01:CDS 45.0%
!!! GAGCTCTCTGTTTTTGAGAC+AGG - Chr6:77103444-77103463 None:intergenic 45.0%
!!! GCTCTCTGTTTTTGAGACAG+GGG - Chr6:77103442-77103461 None:intergenic 45.0%
!!! TACGGTGAGCTTCGCTTTTT+AGG - Chr6:77100321-77100340 None:intergenic 45.0%
AAACACCCGATCTGACCCTA+AGG - Chr6:77101890-77101909 None:intergenic 50.0%
AAGGCATGTGTCCGCTAGAA+AGG - Chr6:77100499-77100518 None:intergenic 50.0%
ACAAAGGACTCATGCTTGGG+GGG + Chr6:77100419-77100438 MsG0680033942.01.T01:intron 50.0%
ACTGACCTTAGGGTCAGATC+GGG + Chr6:77101882-77101901 MsG0680033942.01.T01:intron 50.0%
AGCCTAATCTCGCATTGTGC+GGG + Chr6:77101182-77101201 MsG0680033942.01.T01:intron 50.0%
ATGCGCATGGAGTGACACAA+AGG - Chr6:77100753-77100772 None:intergenic 50.0%
CAGAGAGCTCAGAGGAAAAC+AGG + Chr6:77103454-77103473 MsG0680033942.01.T01:CDS 50.0%
CAGCAAAAGGGTCACCAGTA+AGG - Chr6:77103291-77103310 None:intergenic 50.0%
CAGCACCCTCTACTGTGTAT+GGG - Chr6:77102347-77102366 None:intergenic 50.0%
CAGCCTAATCTCGCATTGTG+CGG + Chr6:77101181-77101200 MsG0680033942.01.T01:intron 50.0%
CCACCAGTCAGTGTAACTGA+AGG + Chr6:77102367-77102386 MsG0680033942.01.T01:intron 50.0%
CGCCACTTCACCCTTTACAA+AGG + Chr6:77100403-77100422 MsG0680033942.01.T01:intron 50.0%
CTAGAGATCAGGTCAACCGA+TGG - Chr6:77101430-77101449 None:intergenic 50.0%
CTATGTAAGTGTGGCACCTC+TGG + Chr6:77101675-77101694 MsG0680033942.01.T01:intron 50.0%
GAGAGAGAGAGGTTTGAGAG+AGG - Chr6:77103014-77103033 None:intergenic 50.0%
GAGCTTCTTGGAATGAGCCT+TGG + Chr6:77103804-77103823 MsG0680033942.01.T01:CDS 50.0%
GTTGATTGCTTCTACGGTGG+TGG - Chr6:77101932-77101951 None:intergenic 50.0%
TCGCCTTCAGTTACACTGAC+TGG - Chr6:77102373-77102392 None:intergenic 50.0%
TCTGTTCCTGGACAGGTCAT+TGG + Chr6:77102051-77102070 MsG0680033942.01.T01:intron 50.0%
TGCGCATGGAGTGACACAAA+GGG - Chr6:77100752-77100771 None:intergenic 50.0%
! CATCGGTTGACCTGATCTCT+AGG + Chr6:77101428-77101447 MsG0680033942.01.T01:intron 50.0%
! CCTTCAGTTACACTGACTGG+TGG - Chr6:77102370-77102389 None:intergenic 50.0%
! CTACACCAAGACCAAGTTGG+TGG + Chr6:77103963-77103982 MsG0680033942.01.T01:CDS 50.0%
! TGGTGACCCTTTTGCTGCAA+TGG + Chr6:77103294-77103313 MsG0680033942.01.T01:CDS 50.0%
! TTTGTGTCACTCCATGCGCA+TGG + Chr6:77100752-77100771 MsG0680033942.01.T01:intron 50.0%
!! GATGCAGCTCTGAAACTCCT+TGG - Chr6:77100724-77100743 None:intergenic 50.0%
AAAGGACTCATGCTTGGGGG+GGG + Chr6:77100421-77100440 MsG0680033942.01.T01:intron 55.0%
AAAGTGGCTCATCTCGCACG+AGG + Chr6:77102222-77102241 MsG0680033942.01.T01:intron 55.0%
CAAAGGACTCATGCTTGGGG+GGG + Chr6:77100420-77100439 MsG0680033942.01.T01:intron 55.0%
CGGTTGACCTGATCTCTAGG+TGG + Chr6:77101431-77101450 MsG0680033942.01.T01:intron 55.0%
CTTGTCGACGCTTCCATCGT+GGG - Chr6:77099877-77099896 None:intergenic 55.0%
GAGATCACCATCCTGCATGG+AGG - Chr6:77100008-77100027 None:intergenic 55.0%
GCAAGCCACCAACTTGGTCT+TGG - Chr6:77103971-77103990 None:intergenic 55.0%
GCAGCACCCTCTACTGTGTA+TGG - Chr6:77102348-77102367 None:intergenic 55.0%
GTCCCGCACAATGCGAGATT+AGG - Chr6:77101187-77101206 None:intergenic 55.0%
TCTGTCTGCATCCATGCGCA+TGG - Chr6:77100766-77100785 None:intergenic 55.0%
!! CGTGCGAGATGAGCCACTTT+TGG - Chr6:77102222-77102241 None:intergenic 55.0%
!! TAGAGGCATCACCTCCATGC+AGG + Chr6:77099994-77100013 MsG0680033942.01.T01:intron 55.0%
AAGGACTCATGCTTGGGGGG+GGG + Chr6:77100422-77100441 MsG0680033942.01.T01:intron 60.0%
ATTCACTGTCCACAGCCCCC+AGG - Chr6:77100374-77100393 None:intergenic 60.0%
CCTTGTCGACGCTTCCATCG+TGG - Chr6:77099878-77099897 None:intergenic 60.0%
GGCATCACCTCCATGCAGGA+TGG + Chr6:77099998-77100017 MsG0680033942.01.T01:intron 60.0%
! TCTGAGATCGTACCTGGGCG+TGG - Chr6:77101781-77101800 None:intergenic 60.0%
!! CCACGATGGAAGCGTCGACA+AGG + Chr6:77099875-77099894 MsG0680033942.01.T01:intron 60.0%
AGGACTCATGCTTGGGGGGG+GGG + Chr6:77100423-77100442 MsG0680033942.01.T01:intron 65.0%
ATCGTACCTGGGCGTGGCAG+AGG - Chr6:77101775-77101794 None:intergenic 65.0%
ACTCATGCTTGGGGGGGGGG+GGG + Chr6:77100426-77100445 MsG0680033942.01.T01:intron 70.0%
CCAGGACGAGGCCTGAAGGG+CGG - Chr6:77100356-77100375 None:intergenic 70.0%
CCCCCAGGACGAGGCCTGAA+GGG - Chr6:77100359-77100378 None:intergenic 70.0%
CCCTTCAGGCCTCGTCCTGG+GGG + Chr6:77100356-77100375 MsG0680033942.01.T01:intron 70.0%
CGCCCTTCAGGCCTCGTCCT+GGG + Chr6:77100354-77100373 MsG0680033942.01.T01:intron 70.0%
GACTCATGCTTGGGGGGGGG+GGG + Chr6:77100425-77100444 MsG0680033942.01.T01:intron 70.0%
GCCCTTCAGGCCTCGTCCTG+GGG + Chr6:77100355-77100374 MsG0680033942.01.T01:intron 70.0%
GGACTCATGCTTGGGGGGGG+GGG + Chr6:77100424-77100443 MsG0680033942.01.T01:intron 70.0%
TGTCCACAGCCCCCAGGACG+AGG - Chr6:77100368-77100387 None:intergenic 70.0%
AGGCCTCGTCCTGGGGGCTG+TGG + Chr6:77100362-77100381 MsG0680033942.01.T01:intron 75.0%
CCGCCCTTCAGGCCTCGTCC+TGG + Chr6:77100353-77100372 MsG0680033942.01.T01:intron 75.0%
CTCATGCTTGGGGGGGGGGG+GGG + Chr6:77100427-77100446 MsG0680033942.01.T01:intron 75.0%
GCCCCCAGGACGAGGCCTGA+AGG - Chr6:77100360-77100379 None:intergenic 75.0%
GTGGCACCTCTGCCACGCCC+AGG + Chr6:77101766-77101785 MsG0680033942.01.T01:intron 75.0%
TCATGCTTGGGGGGGGGGGG+GGG + Chr6:77100428-77100447 MsG0680033942.01.T01:intron 75.0%
! ATGCTTGGGGGGGGGGGGGG+GGG + Chr6:77100430-77100449 MsG0680033942.01.T01:intron 80.0%
! CATGCTTGGGGGGGGGGGGG+GGG + Chr6:77100429-77100448 MsG0680033942.01.T01:intron 80.0%
! TGCTTGGGGGGGGGGGGGGG+GGG + Chr6:77100431-77100450 MsG0680033942.01.T01:intron 85.0%
! CTTGGGGGGGGGGGGGGGGG+GGG + Chr6:77100433-77100452 MsG0680033942.01.T01:intron 90.0%
! GCTTGGGGGGGGGGGGGGGG+GGG + Chr6:77100432-77100451 MsG0680033942.01.T01:intron 90.0%
! TTGGGGGGGGGGGGGGGGGG+GGG + Chr6:77100434-77100453 MsG0680033942.01.T01:intron 90.0%
! TGGGGGGGGGGGGGGGGGGG+GGG + Chr6:77100435-77100454 MsG0680033942.01.T01:intron 95.0%
Chromosome Type Strat End Strand Name
Chr6 gene 77099830 77104587 77099830 ID=MsG0680033942.01;Name=MsG0680033942.01
Chr6 mRNA 77099830 77104587 77099830 ID=MsG0680033942.01.T01;Parent=MsG0680033942.01;Name=MsG0680033942.01.T01;_AED=0.23;_eAED=0.26;_QI=0|0|0|0.75|1|1|4|0|390
Chr6 exon 77099830 77099864 77099830 ID=MsG0680033942.01.T01:exon:418;Parent=MsG0680033942.01.T01
Chr6 exon 77103084 77103635 77103084 ID=MsG0680033942.01.T01:exon:419;Parent=MsG0680033942.01.T01
Chr6 exon 77103749 77104070 77103749 ID=MsG0680033942.01.T01:exon:420;Parent=MsG0680033942.01.T01
Chr6 exon 77104324 77104587 77104324 ID=MsG0680033942.01.T01:exon:421;Parent=MsG0680033942.01.T01
Chr6 CDS 77099830 77099864 77099830 ID=MsG0680033942.01.T01:cds;Parent=MsG0680033942.01.T01
Chr6 CDS 77103084 77103635 77103084 ID=MsG0680033942.01.T01:cds;Parent=MsG0680033942.01.T01
Chr6 CDS 77103749 77104070 77103749 ID=MsG0680033942.01.T01:cds;Parent=MsG0680033942.01.T01
Chr6 CDS 77104324 77104587 77104324 ID=MsG0680033942.01.T01:cds;Parent=MsG0680033942.01.T01
Gene Sequence

>MsG0680033942.01.T01

ATGTTACGGACAAGGTTGAAATATCCTAAATATGTAGTGCATAACAAGTATAAAAGCTATGACTCAATCACCAAAACAAACCATAGTAAAAATGAAGATGAAGAATCATCATTAGTTTTTGATGCTTCATTTCTAAGGCACACCATTAACCTTCCAAAACAATTCATTTGGCCAGATGAAGAGAAACCATGCATGAATATACCTGAACTTGATGTTCCACTCATTGATTTAAAAAATTTCCTTACTGGTGACCCTTTTGCTGCAATGGAAGCTTCAAAAATCATTGGTGAAGCATGTGAAAAACATGGTTTTTTTCTTGTTGTGAATCATGGTATTGATGCAAAGTTAATACAACATGCTCATAGTTACATGGATGGTTTCTTTGAGAATCCCCTGTCTCAAAAACAGAGAGCTCAGAGGAAAACAGGAGAACATTGTGGTTATGCTAGTAGTTTCACTGGAAGATTCTCCTCAAAACTTCCATGGAAAGAAACACTTTCTTTCCAATTTTCTGATGAGAAAAACTCACAAAATATAGTTAAAGACTACCTTTGCAACACATTAGGGGAAGATTTTGAGGAATTTGGGGAGGTTTACCAAAAGTATTGTGAAGCAATGAGTACACTTTCTTTGGGGATAATGGAGCTTCTTGGAATGAGCCTTGGAGTTGGAAAAAATTGTTTTAGAGATTTTTTTGAAGAGAACAAATCAATAATGAGGCTTAATTATTACCCACCATGTCAAAAACCTGATCTTACATTAGGAACTGGACCTCATTGTGATCCAACATCTTTAACCATTCTACACCAAGACCAAGTTGGTGGCTTGCAAGTTTTTGTTGACAATGAGTGGCATTCCATTAAGCCAAATTTCAATGCTTTTGTTGTCAATATTGGCGACACTTTCATGGCTCTTTCAAATGGGAGATACAAGAGTTGTTTACATAGGGCAGTGGTGAACAACAAGACAACAAGAAAATCTCTAGCTTTCTTTTTGTGTCCAAAAGGTGATAAGGTGGTTTGTCCACCAAGTGAATTGGTGAGTGATTTGACACCAAGAATCTATCCTGATTTTACATGGCCTATGCTTCTTGAGTTCACTCAAAAACATTATAGAGCTGATATGAGAACACTTGAGGCTTTTACAAAATGGATCCAACAAAAAAGTGGCTGA
Protein sequence

>MsG0680033942.01.T01

MLRTRLKYPKYVVHNKYKSYDSITKTNHSKNEDEESSLVFDASFLRHTINLPKQFIWPDEEKPCMNIPELDVPLIDLKNFLTGDPFAAMEASKIIGEACEKHGFFLVVNHGIDAKLIQHAHSYMDGFFENPLSQKQRAQRKTGEHCGYASSFTGRFSSKLPWKETLSFQFSDEKNSQNIVKDYLCNTLGEDFEEFGEVYQKYCEAMSTLSLGIMELLGMSLGVGKNCFRDFFEENKSIMRLNYYPPCQKPDLTLGTGPHCDPTSLTILHQDQVGGLQVFVDNEWHSIKPNFNAFVVNIGDTFMALSNGRYKSCLHRAVVNNKTTRKSLAFFLCPKGDKVVCPPSELVSDLTPRIYPDFTWPMLLEFTQKHYRADMRTLEAFTKWIQQKSG*