AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680034345.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680034345.01.T01 MTR_6g084770 75.309 162 40 0 1 162 72 233 1.66e-83 259
MsG0680034345.01.T01 MTR_5g070710 58.642 162 67 0 1 162 71 232 2.67e-58 194
MsG0680034345.01.T01 MTR_8g104080 55.030 169 76 0 1 169 71 239 1.38e-57 186
MsG0680034345.01.T01 MTR_5g470730 54.321 162 74 0 1 162 72 233 2.71e-56 187
MsG0680034345.01.T01 MTR_5g070690 56.442 163 71 0 1 163 70 232 9.31e-54 182
MsG0680034345.01.T01 MTR_5g070800 56.442 163 71 0 1 163 70 232 9.31e-54 182
MsG0680034345.01.T01 MTR_5g070700 58.642 162 67 0 1 162 72 233 1.47e-52 179
MsG0680034345.01.T01 MTR_5g070920 56.790 162 70 0 1 162 72 233 1.37e-51 176
MsG0680034345.01.T01 MTR_5g070850 52.469 162 77 0 1 162 72 233 3.84e-51 175
MsG0680034345.01.T01 MTR_5g070980 54.430 158 72 0 1 158 72 229 1.46e-50 166
MsG0680034345.01.T01 MTR_6g084760 72.449 98 26 1 42 139 1 97 9.46e-47 152
MsG0680034345.01.T01 MTR_6g084910 52.542 118 56 0 44 161 3 120 6.13e-41 138
MsG0680034345.01.T01 MTR_1024s0010 54.783 115 28 2 154 245 12 125 4.55e-37 129
MsG0680034345.01.T01 MTR_8g091690 40.964 166 92 3 1 162 63 226 6.53e-36 134
MsG0680034345.01.T01 MTR_2g065360 41.566 166 93 2 1 162 42 207 1.03e-34 130
MsG0680034345.01.T01 MTR_1g062320 52.252 111 30 1 161 248 6 116 8.55e-34 127
MsG0680034345.01.T01 MTR_6g022050 54.054 111 28 1 161 248 119 229 8.11e-33 120
MsG0680034345.01.T01 MTR_7g063160 52.212 113 31 1 161 250 61 173 9.34e-33 124
MsG0680034345.01.T01 MTR_4g096760 50.000 126 36 2 156 254 118 243 2.85e-32 124
MsG0680034345.01.T01 MTR_7g063170 68.919 74 23 0 161 234 36 109 1.31e-31 114
MsG0680034345.01.T01 MTR_3g079805 52.212 113 31 1 161 250 68 180 2.29e-31 118
MsG0680034345.01.T01 MTR_5g070830 53.913 115 53 0 48 162 229 343 4.98e-30 119
MsG0680034345.01.T01 MTR_1g041005 51.327 113 32 1 161 250 62 174 1.16e-29 114
MsG0680034345.01.T01 MTR_0195s0010 46.018 113 38 1 161 250 127 239 1.36e-29 112
MsG0680034345.01.T01 MTR_1g040935 51.327 113 32 1 161 250 5 117 1.95e-29 114
MsG0680034345.01.T01 MTR_0195s0020 45.217 115 40 1 161 252 127 241 1.54e-28 114
MsG0680034345.01.T01 MTR_1g032820 46.903 113 37 1 161 250 6 118 4.33e-28 107
MsG0680034345.01.T01 MTR_1g007020 61.333 75 29 0 161 235 43 117 1.97e-27 110
MsG0680034345.01.T01 MTR_7g092620 32.121 165 108 1 3 163 71 235 4.15e-27 110
MsG0680034345.01.T01 MTR_3g057980 39.216 153 91 1 1 153 72 222 6.02e-27 109
MsG0680034345.01.T01 MTR_3g057910 34.641 153 98 1 1 153 73 223 7.99e-27 109
MsG0680034345.01.T01 MTR_3g464250 62.667 75 28 0 161 235 76 150 1.38e-26 104
MsG0680034345.01.T01 MTR_3g057900 39.869 153 90 1 1 153 72 222 2.19e-26 108
MsG0680034345.01.T01 MTR_3g025260 36.257 171 100 1 1 162 67 237 5.10e-26 107
MsG0680034345.01.T01 MTR_3g057970 39.216 153 91 1 1 153 69 219 8.57e-26 106
MsG0680034345.01.T01 MTR_5g019010 33.544 158 103 2 1 158 72 227 3.65e-25 104
MsG0680034345.01.T01 MTR_0171s0010 32.692 156 101 1 1 152 72 227 8.91e-25 103
MsG0680034345.01.T01 MTR_5g094570 34.194 155 100 1 1 155 75 227 2.85e-24 102
MsG0680034345.01.T01 MTR_6g035100 33.125 160 106 1 1 160 73 231 3.43e-24 102
MsG0680034345.01.T01 MTR_3g025230 35.260 173 99 2 1 162 67 237 4.37e-24 101
MsG0680034345.01.T01 MTR_3g024520 35.260 173 99 2 1 162 67 237 4.72e-24 101
MsG0680034345.01.T01 MTR_4g104640 32.927 164 106 2 1 160 83 246 5.00e-24 101
MsG0680034345.01.T01 MTR_5g094660 34.194 155 100 1 1 155 75 227 7.99e-24 100
MsG0680034345.01.T01 MTR_4g133750 32.500 160 106 1 1 160 75 232 1.30e-23 100
MsG0680034345.01.T01 MTR_5g060720 56.757 74 32 0 162 235 64 137 1.35e-23 99.0
MsG0680034345.01.T01 MTR_6g045237 42.478 113 42 1 161 250 120 232 1.41e-23 100
MsG0680034345.01.T01 MTR_6g034965 28.662 157 111 1 1 157 73 228 1.94e-23 99.8
MsG0680034345.01.T01 MTR_5g018980 33.333 153 100 1 3 155 74 224 2.03e-23 99.8
MsG0680034345.01.T01 MTR_1g035190 36.601 153 94 2 1 153 56 205 2.75e-23 99.4
MsG0680034345.01.T01 MTR_6g039630 31.373 153 103 1 1 153 70 220 3.87e-23 96.3
MsG0680034345.01.T01 MTR_3g057860 35.032 157 98 2 1 155 72 226 4.68e-23 98.6
MsG0680034345.01.T01 MTR_3g058220 33.548 155 101 1 1 155 72 224 4.93e-23 98.6
MsG0680034345.01.T01 MTR_3g058400 33.548 155 101 1 1 155 73 225 5.66e-23 98.6
MsG0680034345.01.T01 MTR_3g058240 32.026 153 102 1 1 153 37 187 6.49e-23 98.2
MsG0680034345.01.T01 MTR_7g070750 53.333 75 35 0 161 235 6 80 6.77e-23 95.1
MsG0680034345.01.T01 MTR_3g058000 33.987 153 99 1 1 153 74 224 7.23e-23 98.2
MsG0680034345.01.T01 MTR_5g094840 32.026 153 102 1 1 153 80 230 7.77e-23 98.2
MsG0680034345.01.T01 MTR_3g058210 33.987 153 99 1 1 153 73 223 8.12e-23 98.2
MsG0680034345.01.T01 MTR_8g468780 34.524 168 104 2 1 162 1 168 8.88e-23 97.4
MsG0680034345.01.T01 MTR_1g035140 39.837 123 72 1 1 123 73 193 1.60e-22 97.1
MsG0680034345.01.T01 MTR_3g057800 33.974 156 101 1 1 156 71 224 1.89e-22 97.1
MsG0680034345.01.T01 MTR_8g076290 32.716 162 105 3 3 163 72 230 2.55e-22 96.7
MsG0680034345.01.T01 MTR_5g073250 32.911 158 104 1 1 158 75 230 3.28e-22 96.3
MsG0680034345.01.T01 MTR_0171s0020 31.737 167 110 1 1 163 72 238 3.37e-22 96.3
MsG0680034345.01.T01 MTR_2g031910 41.593 113 43 1 161 250 11 123 3.94e-22 92.4
MsG0680034345.01.T01 MTR_3g058230 32.026 153 102 1 1 153 1 151 5.23e-22 95.1
MsG0680034345.01.T01 MTR_0181s0030 33.728 169 108 2 1 165 69 237 5.48e-22 95.5
MsG0680034345.01.T01 MTR_3g058060 32.680 153 101 1 1 153 74 224 6.60e-22 95.5
MsG0680034345.01.T01 MTR_3g436540 31.138 167 110 2 1 162 75 241 8.26e-22 95.1
MsG0680034345.01.T01 MTR_0059s0170 46.237 93 50 0 1 93 73 165 1.09e-21 94.7
MsG0680034345.01.T01 MTR_4g071710 32.317 164 103 3 3 163 74 232 1.20e-21 94.7
MsG0680034345.01.T01 MTR_3g058110 32.680 153 101 1 1 153 74 224 1.34e-21 94.4
MsG0680034345.01.T01 MTR_8g020950 33.140 172 103 3 1 163 73 241 1.50e-21 94.4
MsG0680034345.01.T01 MTR_0554s0020 32.026 153 102 1 1 153 73 223 1.69e-21 94.4
MsG0680034345.01.T01 MTR_4g109470 32.000 175 102 3 1 162 66 236 2.18e-21 94.0
MsG0680034345.01.T01 MTR_5g094550 30.968 155 105 1 1 155 75 227 2.83e-21 93.6
MsG0680034345.01.T01 MTR_2g010530 32.026 153 102 1 1 153 70 220 3.04e-21 93.6
MsG0680034345.01.T01 MTR_6g035115 32.680 153 101 1 1 153 73 223 3.37e-21 93.2
MsG0680034345.01.T01 MTR_1g107305 29.341 167 114 1 1 163 73 239 3.70e-21 92.0
MsG0680034345.01.T01 MTR_7g056103 29.341 167 114 1 1 163 69 235 4.29e-21 93.2
MsG0680034345.01.T01 MTR_3g058250 30.719 153 104 1 1 153 71 221 4.42e-21 92.8
MsG0680034345.01.T01 MTR_0012s0140 38.938 113 46 1 161 250 127 239 5.42e-21 92.8
MsG0680034345.01.T01 MTR_4g104540 30.357 168 113 3 1 164 1 168 5.92e-21 92.0
MsG0680034345.01.T01 MTR_8g469300 32.143 168 108 2 1 162 70 237 6.50e-21 92.4
MsG0680034345.01.T01 MTR_7g023870 50.000 90 22 1 183 249 58 147 6.55e-21 87.0
MsG0680034345.01.T01 MTR_3g076560 33.333 162 104 2 3 160 88 249 6.71e-21 92.4
MsG0680034345.01.T01 MTR_5g018990 31.613 155 104 1 1 155 73 225 6.96e-21 92.4
MsG0680034345.01.T01 MTR_5g094540 29.677 155 107 1 1 155 75 227 7.02e-21 92.4
MsG0680034345.01.T01 MTR_1g107295 29.341 167 114 1 1 163 73 239 7.08e-21 92.4
MsG0680034345.01.T01 MTR_3g020780 30.952 168 106 2 3 163 72 236 8.69e-21 92.0
MsG0680034345.01.T01 MTR_8g445450 37.391 115 49 1 161 252 86 200 9.43e-21 89.7
MsG0680034345.01.T01 MTR_4g104660 32.680 153 101 1 1 151 81 233 1.06e-20 92.0
MsG0680034345.01.T01 MTR_3g076530 30.769 156 101 2 3 153 77 230 1.10e-20 91.7
MsG0680034345.01.T01 MTR_4g048580 32.903 155 102 1 1 155 75 227 1.26e-20 91.7
MsG0680034345.01.T01 MTR_3g032560 56.250 64 28 0 158 221 34 97 1.49e-20 86.3
MsG0680034345.01.T01 MTR_4g062510 28.743 167 115 1 1 163 72 238 1.51e-20 91.7
MsG0680034345.01.T01 MTR_4g104610 29.341 167 115 2 1 164 63 229 1.65e-20 91.3
MsG0680034345.01.T01 MTR_5g021390 30.435 161 108 3 3 162 81 238 1.85e-20 91.3
MsG0680034345.01.T01 MTR_5g095260 31.613 155 100 2 1 153 77 227 2.01e-20 90.9
MsG0680034345.01.T01 MTR_8g466180 29.412 153 106 1 1 153 70 220 2.07e-20 90.9
MsG0680034345.01.T01 MTR_6g471850 44.000 100 33 1 174 250 100 199 2.57e-20 90.9
MsG0680034345.01.T01 MTR_5g094560 30.323 155 106 1 1 155 75 227 2.77e-20 90.5
MsG0680034345.01.T01 MTR_0171s0030 33.562 146 93 2 22 163 5 150 2.97e-20 90.1
MsG0680034345.01.T01 MTR_8g020940 31.579 171 107 3 1 163 71 239 3.06e-20 90.5
MsG0680034345.01.T01 MTR_3g058380 32.877 146 96 1 11 156 2 145 3.09e-20 90.1
MsG0680034345.01.T01 MTR_3g058390 30.065 153 105 1 1 153 71 221 3.46e-20 90.5
MsG0680034345.01.T01 MTR_4g062500 30.723 166 111 1 1 162 70 235 7.27e-20 89.4
MsG0680034345.01.T01 MTR_4g108010 41.304 92 50 1 148 235 97 188 7.80e-20 85.5
MsG0680034345.01.T01 MTR_1g442730 48.810 84 43 0 1 84 70 153 7.91e-20 89.4
MsG0680034345.01.T01 MTR_1g023730 31.395 172 105 1 1 159 68 239 8.99e-20 89.4
MsG0680034345.01.T01 MTR_8g046210 30.286 175 118 1 1 171 76 250 9.68e-20 89.0
MsG0680034345.01.T01 MTR_0597s0030 44.545 110 52 3 176 282 1 104 1.23e-19 83.6
MsG0680034345.01.T01 MTR_1g023700 31.395 172 105 1 1 159 69 240 1.28e-19 88.6
MsG0680034345.01.T01 MTR_6g462640 31.373 153 103 1 1 153 71 221 1.29e-19 88.6
MsG0680034345.01.T01 MTR_5g094520 30.968 155 105 1 1 155 1 153 1.44e-19 88.2
MsG0680034345.01.T01 MTR_5g045770 28.205 156 108 1 2 153 66 221 1.51e-19 88.6
MsG0680034345.01.T01 MTR_4g089020 29.050 179 116 4 1 174 65 237 1.53e-19 88.6
MsG0680034345.01.T01 MTR_5g094520 30.968 155 105 1 1 155 106 258 1.57e-19 88.6
MsG0680034345.01.T01 MTR_4g025950 28.025 157 108 1 2 153 66 222 2.32e-19 86.3
MsG0680034345.01.T01 MTR_4g046100 42.000 100 35 1 174 250 1 100 2.40e-19 85.5
MsG0680034345.01.T01 MTR_5g073320 30.323 155 106 1 1 155 76 228 2.76e-19 87.8
MsG0680034345.01.T01 MTR_4g025970 28.025 157 108 1 2 153 66 222 3.66e-19 87.4
MsG0680034345.01.T01 MTR_8g046240 30.286 175 118 1 1 171 76 250 6.14e-19 86.7
MsG0680034345.01.T01 MTR_5g095290 30.968 155 101 2 1 153 77 227 6.77e-19 86.7
MsG0680034345.01.T01 MTR_4g026200 28.395 162 112 1 2 159 66 227 7.72e-19 86.3
MsG0680034345.01.T01 MTR_8g466790 40.000 110 43 1 164 250 85 194 8.48e-19 83.2
MsG0680034345.01.T01 MTR_3g436390 30.539 167 110 2 1 162 71 236 8.90e-19 86.3
MsG0680034345.01.T01 MTR_7g445700 36.975 119 62 3 148 253 101 219 9.03e-19 86.3
MsG0680034345.01.T01 MTR_4g089055 30.818 159 100 3 1 155 87 239 9.42e-19 86.3
MsG0680034345.01.T01 MTR_8g012585 33.333 177 106 2 2 166 10 186 1.48e-18 85.5
MsG0680034345.01.T01 MTR_0022s0290 32.298 161 101 3 1 155 76 234 2.15e-18 85.1
MsG0680034345.01.T01 MTR_4g102280 34.337 166 101 3 3 162 81 244 2.54e-18 85.1
MsG0680034345.01.T01 MTR_7g111460 35.652 115 51 1 161 252 110 224 4.08e-18 84.7
MsG0680034345.01.T01 MTR_1g023720 31.325 166 101 1 1 153 68 233 5.85e-18 84.0
MsG0680034345.01.T01 MTR_6g038330 45.000 80 40 1 163 238 8 87 6.23e-18 81.6
MsG0680034345.01.T01 MTR_4g026050 27.607 163 114 1 1 159 65 227 6.34e-18 83.6
MsG0680034345.01.T01 MTR_4g025980 25.926 162 116 1 2 159 67 228 7.17e-18 83.6
MsG0680034345.01.T01 MTR_4g102310 32.317 164 107 2 3 162 76 239 8.15e-18 83.6
MsG0680034345.01.T01 MTR_2g073420 31.461 178 118 1 1 174 79 256 1.01e-17 83.2
MsG0680034345.01.T01 MTR_4g062530 29.630 162 109 2 2 163 71 227 2.83e-17 81.6
MsG0680034345.01.T01 MTR_1g090997 36.082 97 39 1 177 250 7 103 3.51e-17 81.3
MsG0680034345.01.T01 MTR_5g073240 45.333 75 41 0 1 75 119 193 5.46e-17 77.8
MsG0680034345.01.T01 MTR_8g020960 31.579 171 107 2 1 163 72 240 6.18e-17 80.9
MsG0680034345.01.T01 MTR_1g111240 31.609 174 100 6 3 163 103 270 9.72e-17 80.5
MsG0680034345.01.T01 MTR_1g093780 37.615 109 45 1 167 252 84 192 1.05e-16 80.1
MsG0680034345.01.T01 MTR_4g094772 28.395 162 114 2 2 162 70 230 1.33e-16 79.7
MsG0680034345.01.T01 MTR_5g016440 27.647 170 117 2 2 165 67 236 1.49e-16 79.7
MsG0680034345.01.T01 MTR_3g076550 26.846 149 103 3 17 160 87 234 1.63e-16 79.7
MsG0680034345.01.T01 MTR_4g471620 39.024 82 50 0 3 84 74 155 1.65e-16 76.6
MsG0680034345.01.T01 MTR_5g072980 29.299 157 107 1 1 153 69 225 1.71e-16 79.7
MsG0680034345.01.T01 MTR_5g072930 29.299 157 107 1 1 153 69 225 1.71e-16 79.7
MsG0680034345.01.T01 MTR_4g133760 51.429 70 34 0 1 70 1 70 2.31e-16 78.6
MsG0680034345.01.T01 MTR_3g062250 36.283 113 49 1 161 250 89 201 3.42e-16 78.6
MsG0680034345.01.T01 MTR_5g023680 26.380 163 116 1 1 159 41 203 3.79e-16 78.6
MsG0680034345.01.T01 MTR_5g095220 30.323 155 87 3 1 153 64 199 5.61e-16 77.8
MsG0680034345.01.T01 MTR_4g104550 27.389 157 112 1 1 155 63 219 7.25e-16 77.8
MsG0680034345.01.T01 MTR_7g012330 24.540 163 119 1 1 159 70 232 1.05e-15 77.0
MsG0680034345.01.T01 MTR_5g073230 30.968 155 90 3 1 155 78 215 1.96e-15 76.3
MsG0680034345.01.T01 MTR_4g026070 27.607 163 114 1 1 159 65 227 2.08e-15 75.1
MsG0680034345.01.T01 MTR_4g035330 29.630 162 112 2 2 162 67 227 2.23e-15 76.3
MsG0680034345.01.T01 MTR_6g043680 38.095 105 50 2 161 253 65 166 2.43e-15 74.3
MsG0680034345.01.T01 MTR_4g089025 27.673 159 108 3 1 155 87 242 3.14e-15 75.9
MsG0680034345.01.T01 MTR_7g006745 41.333 75 44 0 161 235 112 186 4.04e-15 75.1
MsG0680034345.01.T01 MTR_5g073020 29.677 155 105 1 3 153 71 225 4.22e-15 75.5
MsG0680034345.01.T01 MTR_6g061130 46.835 79 19 1 195 250 75 153 6.14e-15 74.3
MsG0680034345.01.T01 MTR_1g055325 30.636 173 116 1 1 169 89 261 6.93e-15 74.7
MsG0680034345.01.T01 MTR_7g028020 27.778 162 112 2 2 163 68 224 7.45e-15 74.7
MsG0680034345.01.T01 MTR_5g007550 28.916 166 107 2 1 162 77 235 7.67e-15 74.7
MsG0680034345.01.T01 MTR_7g027960 27.778 162 112 2 2 163 68 224 7.87e-15 74.7
MsG0680034345.01.T01 MTR_5g007450 28.916 166 107 2 1 162 77 235 7.97e-15 74.7
MsG0680034345.01.T01 MTR_7g087520 25.786 159 110 1 3 153 74 232 9.50e-15 74.3
MsG0680034345.01.T01 MTR_8g040870 38.525 122 35 3 152 250 19 123 9.91e-15 72.0
MsG0680034345.01.T01 MTR_5g094535 39.241 79 48 0 1 79 75 153 1.05e-14 72.0
MsG0680034345.01.T01 MTR_7g092600 33.728 169 105 3 1 163 74 241 1.20e-14 73.9
MsG0680034345.01.T01 MTR_6g016995 51.667 60 29 0 161 220 34 93 1.27e-14 68.9
MsG0680034345.01.T01 MTR_5g094670 29.032 155 68 4 1 155 75 187 1.31e-14 72.4
MsG0680034345.01.T01 MTR_2g437880 29.480 173 108 3 2 160 68 240 1.72e-14 73.6
MsG0680034345.01.T01 MTR_5g018480 26.590 173 116 2 2 163 78 250 1.74e-14 72.8
MsG0680034345.01.T01 MTR_8g091680 35.526 152 75 4 1 148 63 195 2.01e-14 73.2
MsG0680034345.01.T01 MTR_7g012860 24.691 162 118 1 2 159 70 231 4.10e-14 72.4
MsG0680034345.01.T01 MTR_0287s0060 24.691 162 118 1 2 159 70 231 4.10e-14 72.4
MsG0680034345.01.T01 MTR_2g437840 30.286 175 106 6 2 162 67 239 4.49e-14 72.4
MsG0680034345.01.T01 MTR_1g097240 26.776 183 129 2 1 178 62 244 5.66e-14 72.0
MsG0680034345.01.T01 MTR_8g445160 61.702 47 18 0 180 226 1 47 5.91e-14 72.0
MsG0680034345.01.T01 MTR_4g077210 29.714 175 109 4 3 165 72 244 6.41e-14 72.0
MsG0680034345.01.T01 MTR_1g103670 27.711 166 116 1 1 162 69 234 7.76e-14 71.6
MsG0680034345.01.T01 MTR_0014s0120 35.417 96 53 2 161 250 116 208 8.21e-14 71.2
MsG0680034345.01.T01 MTR_2g450040 28.324 173 113 3 2 163 77 249 9.11e-14 71.6
MsG0680034345.01.T01 MTR_1g034250 50.820 61 26 1 154 210 119 179 1.65e-13 69.3
MsG0680034345.01.T01 MTR_1g103680 27.108 166 117 1 1 162 70 235 1.98e-13 70.5
MsG0680034345.01.T01 MTR_4g088425 27.711 166 112 3 2 162 77 239 2.86e-13 70.1
MsG0680034345.01.T01 MTR_5g016410 27.168 173 113 3 2 162 68 239 2.98e-13 69.7
MsG0680034345.01.T01 MTR_1g031700 27.108 166 117 1 1 162 69 234 3.42e-13 69.7
MsG0680034345.01.T01 MTR_6g042610 26.966 178 113 4 2 163 72 248 3.91e-13 69.7
MsG0680034345.01.T01 MTR_4g094775 29.070 172 111 3 1 161 67 238 6.07e-13 68.9
MsG0680034345.01.T01 MTR_5g075450 29.412 170 109 6 3 163 71 238 6.79e-13 68.9
MsG0680034345.01.T01 MTR_4g088400 25.434 173 117 2 2 162 84 256 1.10e-12 68.2
MsG0680034345.01.T01 MTR_4g089030 27.215 158 112 3 1 155 83 240 1.22e-12 68.2
MsG0680034345.01.T01 MTR_6g008500 27.225 191 110 3 2 163 75 265 2.02e-12 67.4
MsG0680034345.01.T01 MTR_8g036185 28.030 132 91 1 23 150 92 223 2.02e-12 67.4
MsG0680034345.01.T01 MTR_7g075600 29.143 175 109 4 1 164 69 239 2.31e-12 67.4
MsG0680034345.01.T01 MTR_1g037370 27.711 166 116 1 1 162 66 231 2.40e-12 67.0
MsG0680034345.01.T01 MTR_0488s0020 43.939 66 37 0 161 226 160 225 2.57e-12 67.0
MsG0680034345.01.T01 MTR_7g075390 28.824 170 115 2 1 164 69 238 2.79e-12 67.0
MsG0680034345.01.T01 MTR_6g042540 28.090 178 111 4 2 163 72 248 2.89e-12 67.0
MsG0680034345.01.T01 MTR_3g077460 29.688 128 72 1 1 128 42 151 2.98e-12 66.6
MsG0680034345.01.T01 MTR_8g067570 35.870 92 36 1 182 250 9 100 3.19e-12 62.0
MsG0680034345.01.T01 MTR_7g075610 27.624 181 103 5 1 164 69 238 3.88e-12 66.6
MsG0680034345.01.T01 MTR_5g046930 40.000 75 45 0 161 235 69 143 4.34e-12 63.9
MsG0680034345.01.T01 MTR_5g007460 30.994 171 107 3 1 162 44 212 7.25e-12 65.9
MsG0680034345.01.T01 MTR_2g438650 38.667 75 46 0 161 235 144 218 8.02e-12 65.5
MsG0680034345.01.T01 MTR_3g467200 26.012 173 117 3 2 163 89 261 8.06e-12 65.5
MsG0680034345.01.T01 MTR_4g045863 38.667 75 46 0 161 235 39 113 1.31e-11 64.7
MsG0680034345.01.T01 MTR_2g054220 67.568 37 12 0 161 197 14 50 1.33e-11 59.3
MsG0680034345.01.T01 MTR_5g060840 36.111 108 49 3 161 261 6 100 1.52e-11 63.5
MsG0680034345.01.T01 MTR_5g460950 36.111 108 49 3 161 261 6 100 1.52e-11 63.5
MsG0680034345.01.T01 MTR_1g091023 29.213 178 96 5 1 162 69 232 1.53e-11 64.7
MsG0680034345.01.T01 MTR_2g043290 37.113 97 38 1 201 274 1 97 1.73e-11 63.9
MsG0680034345.01.T01 MTR_6g008620 25.967 181 112 4 2 163 79 256 1.97e-11 64.3
MsG0680034345.01.T01 MTR_7g013110 41.558 77 30 1 161 237 126 187 2.15e-11 64.3
MsG0680034345.01.T01 MTR_1g091003 28.090 178 118 4 1 172 69 242 3.40e-11 63.5
MsG0680034345.01.T01 MTR_4g035630 37.333 75 47 0 161 235 105 179 3.50e-11 63.2
MsG0680034345.01.T01 MTR_8g104170 30.769 117 54 2 161 250 47 163 3.53e-11 63.5
MsG0680034345.01.T01 MTR_5g085370 31.313 99 45 1 177 252 4 102 3.61e-11 63.5
MsG0680034345.01.T01 MTR_5g024590 33.333 75 50 0 161 235 18 92 6.55e-11 61.6
MsG0680034345.01.T01 MTR_5g094460 42.647 68 38 1 1 67 66 133 6.62e-11 62.4
MsG0680034345.01.T01 MTR_2g073480 28.472 144 99 1 1 140 1 144 6.68e-11 62.8
MsG0680034345.01.T01 MTR_2g073440 28.472 144 99 1 1 140 68 211 7.15e-11 62.8
MsG0680034345.01.T01 MTR_3g467220 26.012 173 117 3 2 163 84 256 7.56e-11 62.8
MsG0680034345.01.T01 MTR_7g075540 25.294 170 121 2 1 164 69 238 9.02e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680034345.01.T01 AT5G07990 36.145 166 102 1 1 162 68 233 2.79e-24 102
MsG0680034345.01.T01 AT3G48320 32.704 159 105 1 1 159 67 223 1.34e-22 97.4
MsG0680034345.01.T01 AT3G48280 33.333 159 104 1 1 159 65 221 2.48e-22 96.7
MsG0680034345.01.T01 AT3G48270 32.704 159 105 1 1 159 66 222 3.40e-22 96.3
MsG0680034345.01.T01 AT3G48290 30.818 159 108 1 1 159 68 224 3.59e-22 96.3
MsG0680034345.01.T01 AT3G48290 30.818 159 108 1 1 159 68 224 4.33e-22 95.9
MsG0680034345.01.T01 AT3G48310 30.818 159 108 1 1 159 67 223 2.29e-21 94.0
MsG0680034345.01.T01 AT1G11610 31.481 162 108 1 1 159 68 229 1.32e-20 91.7
MsG0680034345.01.T01 AT1G11610 31.481 162 108 1 1 159 68 229 1.68e-20 91.3
MsG0680034345.01.T01 AT4G13310 29.878 164 110 2 1 159 67 230 2.50e-20 90.1
MsG0680034345.01.T01 AT3G48300 31.410 156 105 1 1 156 64 217 2.61e-20 90.9
MsG0680034345.01.T01 AT3G48300 31.410 156 105 1 1 156 66 219 2.63e-20 90.9
MsG0680034345.01.T01 AT4G36220 32.515 163 102 4 3 162 77 234 2.78e-20 90.9
MsG0680034345.01.T01 AT4G13310 29.878 164 110 2 1 159 67 230 3.59e-20 90.5
MsG0680034345.01.T01 AT2G30770 30.539 167 112 3 1 163 68 234 7.55e-20 89.4
MsG0680034345.01.T01 AT3G26290 28.495 186 120 4 1 175 66 249 7.98e-20 89.4
MsG0680034345.01.T01 AT5G57260 29.560 159 104 2 1 153 65 221 8.57e-20 89.4
MsG0680034345.01.T01 AT3G26290 28.495 186 120 4 1 175 79 262 8.88e-20 89.4
MsG0680034345.01.T01 AT5G24950 27.976 168 117 2 1 164 67 234 1.28e-19 88.6
MsG0680034345.01.T01 AT2G24180 35.032 157 98 1 1 153 71 227 1.53e-19 88.6
MsG0680034345.01.T01 AT3G26310 31.447 159 101 2 1 153 65 221 1.79e-19 88.2
MsG0680034345.01.T01 AT1G13080 33.758 157 98 1 3 153 68 224 2.78e-19 87.8
MsG0680034345.01.T01 AT5G25130 32.099 162 95 2 1 153 64 219 3.07e-19 87.8
MsG0680034345.01.T01 AT3G44250 35.032 157 96 3 3 153 65 221 3.40e-19 87.4
MsG0680034345.01.T01 AT4G13290 27.439 164 114 2 1 159 68 231 1.18e-18 85.9
MsG0680034345.01.T01 AT1G13090 31.013 158 104 2 3 155 65 222 1.28e-18 84.3
MsG0680034345.01.T01 AT5G42590 28.931 159 110 1 1 156 67 225 1.84e-18 85.5
MsG0680034345.01.T01 AT4G12300 30.890 191 126 2 3 187 79 269 2.76e-18 84.7
MsG0680034345.01.T01 AT3G26300 28.495 186 120 3 1 175 66 249 2.83e-18 84.7
MsG0680034345.01.T01 AT1G13090 31.013 158 104 2 3 155 65 222 4.08e-18 84.3
MsG0680034345.01.T01 AT3G26190 30.380 158 105 1 1 153 63 220 5.74e-18 84.0
MsG0680034345.01.T01 AT5G67310 28.144 167 114 3 3 163 80 246 6.05e-18 84.0
MsG0680034345.01.T01 AT3G26200 32.911 158 101 1 1 153 63 220 8.22e-18 83.6
MsG0680034345.01.T01 AT3G26210 36.000 125 80 0 1 125 66 190 8.88e-18 83.2
MsG0680034345.01.T01 AT2G30750 32.716 162 106 2 1 159 68 229 9.59e-18 83.2
MsG0680034345.01.T01 AT4G37310 29.651 172 110 4 2 162 68 239 1.26e-17 82.8
MsG0680034345.01.T01 AT3G26280 31.013 158 103 2 1 153 84 240 3.09e-17 81.6
MsG0680034345.01.T01 AT3G26280 31.013 158 103 2 1 153 67 223 3.21e-17 81.6
MsG0680034345.01.T01 AT3G26330 28.750 160 110 1 1 156 66 225 3.60e-17 81.6
MsG0680034345.01.T01 AT3G53280 33.544 158 100 2 1 153 63 220 3.62e-17 81.6
MsG0680034345.01.T01 AT5G44620 31.737 167 108 2 2 162 82 248 3.71e-17 81.6
MsG0680034345.01.T01 AT3G26150 33.544 158 100 2 1 153 65 222 3.75e-17 81.6
MsG0680034345.01.T01 AT5G25180 31.410 156 104 1 1 153 64 219 4.40e-17 81.3
MsG0680034345.01.T01 AT3G26180 32.911 158 101 1 1 153 65 222 4.49e-17 81.3
MsG0680034345.01.T01 AT4G12320 33.133 166 105 2 3 162 79 244 5.30e-17 81.3
MsG0680034345.01.T01 AT5G25120 29.012 162 100 2 1 153 64 219 7.30e-17 80.5
MsG0680034345.01.T01 AT5G35715 31.646 158 103 2 1 153 1 158 7.76e-17 80.5
MsG0680034345.01.T01 AT3G26170 32.911 158 101 1 1 153 65 222 9.96e-17 80.1
MsG0680034345.01.T01 AT4G37410 29.268 123 86 1 3 124 68 190 1.31e-16 80.1
MsG0680034345.01.T01 AT4G20240 31.783 129 88 0 1 129 68 196 1.36e-16 79.7
MsG0680034345.01.T01 AT4G20240 31.783 129 88 0 1 129 68 196 1.61e-16 79.3
MsG0680034345.01.T01 AT1G13110 29.193 161 109 1 1 156 67 227 2.22e-16 79.3
MsG0680034345.01.T01 AT2G45560 30.588 170 109 4 1 162 73 241 5.45e-16 77.0
MsG0680034345.01.T01 AT5G25140 29.747 158 106 2 3 156 66 222 6.25e-16 77.8
MsG0680034345.01.T01 AT3G26320 27.673 159 107 2 1 153 66 222 7.44e-16 77.8
MsG0680034345.01.T01 AT2G45560 30.178 169 109 4 1 161 73 240 8.25e-16 75.5
MsG0680034345.01.T01 AT5G24960 29.586 169 115 3 1 165 68 236 1.02e-15 77.0
MsG0680034345.01.T01 AT4G22710 29.762 168 112 2 1 162 89 256 1.05e-15 77.4
MsG0680034345.01.T01 AT5G24960 29.586 169 115 3 1 165 68 236 1.08e-15 77.0
MsG0680034345.01.T01 AT4G22690 29.762 168 112 2 1 162 120 287 1.19e-15 77.0
MsG0680034345.01.T01 AT2G45560 30.588 170 109 4 1 162 73 241 1.30e-15 77.0
MsG0680034345.01.T01 AT3G26160 31.646 158 103 1 1 153 65 222 1.41e-15 77.0
MsG0680034345.01.T01 AT1G01280 27.500 160 107 1 3 153 69 228 1.73e-15 76.6
MsG0680034345.01.T01 AT2G23190 31.288 163 103 3 2 155 114 276 2.11e-15 76.3
MsG0680034345.01.T01 AT4G37340 28.659 164 108 3 1 155 68 231 3.08e-15 75.9
MsG0680034345.01.T01 AT4G31970 27.222 180 113 3 1 163 70 248 3.26e-15 75.9
MsG0680034345.01.T01 AT5G57220 31.452 124 83 2 2 124 66 188 6.34e-15 75.1
MsG0680034345.01.T01 AT4G12310 32.530 166 106 2 3 162 81 246 6.91e-15 74.7
MsG0680034345.01.T01 AT5G06905 31.765 170 104 4 1 162 66 231 7.05e-15 74.7
MsG0680034345.01.T01 AT3G25180 28.659 164 111 1 2 159 77 240 9.12e-15 74.3
MsG0680034345.01.T01 AT4G31940 27.778 180 113 2 1 163 70 249 1.10e-14 74.3
MsG0680034345.01.T01 AT5G04330 33.333 171 99 5 1 162 67 231 1.12e-14 74.3
MsG0680034345.01.T01 AT5G36220 29.586 169 107 4 1 158 74 241 1.14e-14 74.3
MsG0680034345.01.T01 AT3G25180 28.485 165 112 1 2 160 77 241 1.21e-14 73.9
MsG0680034345.01.T01 AT1G79370 27.374 179 112 4 2 162 79 257 1.48e-14 73.9
MsG0680034345.01.T01 AT2G23220 29.193 161 105 3 2 153 85 245 1.62e-14 73.6
MsG0680034345.01.T01 AT5G10610 30.328 122 85 0 3 124 70 191 2.10e-14 73.6
MsG0680034345.01.T01 AT5G10600 35.789 95 61 0 3 97 84 178 2.44e-14 73.2
MsG0680034345.01.T01 AT3G53305 28.481 158 108 1 1 153 1 158 2.46e-14 72.4
MsG0680034345.01.T01 AT4G20235 29.730 148 81 3 13 159 82 207 2.54e-14 72.4
MsG0680034345.01.T01 AT1G13100 33.058 121 81 0 3 123 62 182 3.51e-14 72.8
MsG0680034345.01.T01 AT5G06900 27.976 168 115 1 1 162 69 236 4.49e-14 72.4
MsG0680034345.01.T01 AT3G53300 28.931 159 108 2 1 154 63 221 4.92e-14 72.4
MsG0680034345.01.T01 AT4G37330 28.662 157 104 3 3 152 71 226 7.98e-14 71.6
MsG0680034345.01.T01 AT2G05180 29.487 156 106 1 1 152 77 232 1.13e-13 71.2
MsG0680034345.01.T01 AT4G37320 28.221 163 106 3 3 155 71 232 1.86e-13 70.5
MsG0680034345.01.T01 AT4G31500 25.301 166 112 2 2 159 66 227 2.87e-13 70.1
MsG0680034345.01.T01 AT4G37360 28.049 164 109 3 1 155 68 231 3.18e-13 69.7
MsG0680034345.01.T01 AT4G12330 27.811 169 113 3 3 162 83 251 3.53e-13 69.7
MsG0680034345.01.T01 AT3G26270 28.481 158 107 2 1 153 67 223 4.62e-13 69.3
MsG0680034345.01.T01 AT3G20960 28.302 159 110 1 1 155 77 235 4.72e-13 69.3
MsG0680034345.01.T01 AT2G45570 28.571 168 114 3 1 162 73 240 6.23e-13 68.9
MsG0680034345.01.T01 AT4G13770 23.353 167 116 2 1 159 66 228 7.27e-13 68.9
MsG0680034345.01.T01 AT4G37430 30.000 130 84 3 2 124 64 193 7.53e-13 68.6
MsG0680034345.01.T01 AT3G20130 28.846 156 107 1 3 154 80 235 1.00e-12 68.6
MsG0680034345.01.T01 AT3G53290 29.078 141 95 2 18 153 10 150 1.03e-12 68.2
MsG0680034345.01.T01 AT4G37400 27.419 124 87 2 2 124 67 188 1.87e-12 67.4
MsG0680034345.01.T01 AT4G15360 31.126 151 100 1 8 154 83 233 2.25e-12 67.4
MsG0680034345.01.T01 AT3G28740 30.488 164 103 4 2 155 78 240 2.53e-12 67.0
MsG0680034345.01.T01 AT2G42250 27.711 166 116 1 1 162 76 241 2.69e-12 67.0
MsG0680034345.01.T01 AT3G61040 28.571 168 114 2 1 162 68 235 3.72e-12 66.6
MsG0680034345.01.T01 AT3G61040 28.571 168 114 2 1 162 68 235 4.20e-12 66.2
MsG0680034345.01.T01 AT5G42580 30.070 143 97 1 1 143 75 214 8.38e-12 65.5
MsG0680034345.01.T01 AT3G26220 30.534 131 91 0 3 133 66 196 1.24e-11 65.1
MsG0680034345.01.T01 AT5G05260 26.966 178 113 3 3 163 81 258 1.52e-11 64.7
MsG0680034345.01.T01 AT5G05260 26.966 178 113 3 3 163 81 258 1.55e-11 64.7
MsG0680034345.01.T01 AT4G39950 25.281 178 113 4 2 163 95 268 2.04e-11 64.3
MsG0680034345.01.T01 AT4G39950 25.281 178 113 4 2 163 135 308 2.13e-11 64.3
MsG0680034345.01.T01 AT5G35917 27.222 180 112 3 3 163 83 262 2.30e-11 64.3
MsG0680034345.01.T01 AT3G20090 27.044 159 112 1 1 155 79 237 4.47e-11 63.5
MsG0680034345.01.T01 AT4G37370 27.607 163 109 3 2 155 69 231 5.03e-11 63.2
MsG0680034345.01.T01 AT2G40890 29.703 101 71 0 1 101 62 162 5.04e-11 63.2
MsG0680034345.01.T01 AT1G58260 22.222 171 119 2 4 160 78 248 9.45e-11 62.4

Find 66 sgRNAs with CRISPR-Local

Find 151 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATGATAGATTCAACATAAA+TGG 0.183922 6:+86030764 MsG0680034345.01.T01:CDS
TGGAACTTCCTCACGAATAT+TGG 0.243363 6:+86032285 MsG0680034345.01.T01:CDS
TATTGGTCATAAAATGATAA+TGG 0.283462 6:+86030730 MsG0680034345.01.T01:CDS
TACTCATTTACATGTTGTTT+GGG 0.309716 6:+86032151 MsG0680034345.01.T01:CDS
TTACTCATTTACATGTTGTT+TGG 0.321731 6:+86032150 MsG0680034345.01.T01:CDS
GCTAGCCCCATTTGATCTTC+AGG 0.324924 6:+86030847 MsG0680034345.01.T01:CDS
GGCCTAACTTTCACCGAGTA+TGG 0.361254 6:+86030527 MsG0680034345.01.T01:CDS
GTTGATCTTATAGAGAATAT+TGG 0.367191 6:+86030713 MsG0680034345.01.T01:CDS
TTACATGTTGTTTGGGCAAT+GGG 0.378214 6:+86032158 MsG0680034345.01.T01:CDS
TAACATACCTGAAGATCAAA+TGG 0.390291 6:-86030854 None:intergenic
ATTGGTCATAAAATGATAAT+GGG 0.416828 6:+86030731 MsG0680034345.01.T01:CDS
GGAAGATTTGAGGAACTAGA+AGG 0.421308 6:-86032434 None:intergenic
GTTTCAGATTATGTCACATA+TGG 0.425874 6:+86030497 MsG0680034345.01.T01:CDS
CCTTTGAGAAAGGAAGAGTT+GGG 0.436448 6:+86030623 MsG0680034345.01.T01:CDS
ACATGTGTGGAGTAGATTAA+TGG 0.438138 6:+86032265 MsG0680034345.01.T01:CDS
ATGATAGATTCAACATAAAT+GGG 0.439436 6:+86030765 MsG0680034345.01.T01:CDS
TCACCGAGTATGGTGACAAT+TGG 0.441727 6:+86030537 MsG0680034345.01.T01:CDS
TTGGACTCGTCCTAACTTCA+AGG 0.445274 6:-86030390 None:intergenic
CCCATAATGTCCTTGAAGTT+AGG 0.450564 6:+86030380 None:intergenic
CACCATACTCGGTGAAAGTT+AGG 0.457742 6:-86030529 None:intergenic
CAAGATCTTTCATGTGGTCC+TGG 0.458648 6:+86032361 MsG0680034345.01.T01:CDS
AGTACTTTCTGGAAGATTTG+AGG 0.461057 6:-86032444 None:intergenic
GTGACAATTGGCGCAATATG+AGG 0.470749 6:+86030549 MsG0680034345.01.T01:CDS
TCCTTTGAGAAAGGAAGAGT+TGG 0.476606 6:+86030622 MsG0680034345.01.T01:CDS
TTTACATGTTGTTTGGGCAA+TGG 0.482694 6:+86032157 MsG0680034345.01.T01:CDS
TTTGAGGAACTAGAAGGAAG+TGG 0.485928 6:-86032428 None:intergenic
TGTTGATGTCCACAAGGTTG+TGG 0.487203 6:+86030691 MsG0680034345.01.T01:CDS
TCCTTAGTCCATTCGAAAAG+TGG 0.493480 6:-86032209 None:intergenic
GATGTTTGCTCCTTTGAGAA+AGG 0.499244 6:+86030613 MsG0680034345.01.T01:CDS
AACATACCTGAAGATCAAAT+GGG 0.501775 6:-86030853 None:intergenic
GTGATGAAACCACAATGGTT+TGG 0.508876 6:-86030409 None:intergenic
AAACACTATCATGGGTCTTG+AGG 0.509745 6:-86030451 None:intergenic
AACAACATGTAAATGAGTAA+TGG 0.523837 6:-86032147 None:intergenic
AGGAATAGTTCAGCAGTTTG+AGG 0.525639 6:-86030431 None:intergenic
CTCTCGCAAGATCTTTCATG+TGG 0.525875 6:+86032355 MsG0680034345.01.T01:CDS
GGGAACTATTAACTTGAAGC+CGG 0.527394 6:+86032178 MsG0680034345.01.T01:CDS
AGATCAAATGGGGCTAGCCT+TGG 0.527852 6:-86030842 None:intergenic
TGAATCTATCATCCTTGCTC+CGG 0.530900 6:-86030754 None:intergenic
GCGCCAATTGTCACCATACT+CGG 0.536063 6:-86030540 None:intergenic
ATGTCAGTTGCAGTTGAACC+AGG 0.540907 6:-86032379 None:intergenic
CCCAACTCTTCCTTTCTCAA+AGG 0.542485 6:-86030623 None:intergenic
GAATTCTTGCAGCTGAAGCA+AGG 0.544040 6:-86032406 None:intergenic
GTCATAAAATGATAATGGGC+CGG 0.553047 6:+86030735 MsG0680034345.01.T01:CDS
ATCTAGCTGACTTCGTGCCA+AGG 0.556974 6:+86030825 MsG0680034345.01.T01:CDS
AATGATAATGGGCCGGAGCA+AGG 0.560566 6:+86030742 MsG0680034345.01.T01:CDS
TGAAGCATGCAATAATTGCA+TGG 0.562058 6:-86030582 None:intergenic
ACTTCCTCACGAATATTGGA+TGG 0.577328 6:+86032289 MsG0680034345.01.T01:CDS
CTCACGAATATTGGATGGAA+AGG 0.581283 6:+86032294 MsG0680034345.01.T01:CDS
TTATGTCACATATGGTAGCA+AGG 0.586238 6:+86030505 MsG0680034345.01.T01:CDS
GGAACTATTAACTTGAAGCC+GGG 0.587169 6:+86032179 MsG0680034345.01.T01:CDS
TATGTCACATATGGTAGCAA+GGG 0.593901 6:+86030506 MsG0680034345.01.T01:CDS
TCGAAAAGTGGTATCACACC+CGG 0.609146 6:-86032197 None:intergenic
AACATGTAAATGAGTAATGG+AGG 0.612007 6:-86032144 None:intergenic
GTAATATTCATGCACATGTG+TGG 0.613851 6:+86032252 MsG0680034345.01.T01:CDS
AATTCTTGCAGCTGAAGCAA+GGG 0.620054 6:-86032405 None:intergenic
TAAGATCAACCACAACCTTG+TGG 0.621762 6:-86030700 None:intergenic
AGGACGAGTCCAAACCATTG+TGG 0.622465 6:+86030400 MsG0680034345.01.T01:CDS
CTTTGAGAAAGGAAGAGTTG+GGG 0.626053 6:+86030624 MsG0680034345.01.T01:CDS
CTTTCCATCCAATATTCGTG+AGG 0.634821 6:-86032293 None:intergenic
TTCACGTGAAATCGCAAGTG+CGG 0.639314 6:+86032319 MsG0680034345.01.T01:CDS
GAAATCATCTACATTACATG+AGG 0.650917 6:+86030667 MsG0680034345.01.T01:CDS
TTGAGGTGATGAAACCACAA+TGG 0.654905 6:-86030414 None:intergenic
ACATACCTGAAGATCAAATG+GGG 0.696368 6:-86030852 None:intergenic
TGAGGTTGTTGATGTCCACA+AGG 0.740850 6:+86030685 MsG0680034345.01.T01:CDS
TATCTTGGGAGAGATTCAAG+GGG 0.775508 6:-86032480 None:intergenic
ATCTTGGGAGAGATTCAAGG+GGG 0.780025 6:-86032479 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAAAATTTGCA+AGG - Chr6:86030998-86031017 None:intergenic 10.0%
!! AAAAAAAAAAATCAAAAAGT+AGG + Chr6:86031106-86031125 MsG0680034345.01.T01:intron 10.0%
!!! AAAAGTTTTTTTTTTTAGAT+TGG - Chr6:86031180-86031199 None:intergenic 10.0%
!!! CATATCTTTTTATTATTTTT+GGG - Chr6:86030890-86030909 None:intergenic 10.0%
!!! TCATATCTTTTTATTATTTT+TGG - Chr6:86030891-86030910 None:intergenic 10.0%
!!! TGCAAATTTTTTTTTTTTTT+TGG + Chr6:86030998-86031017 MsG0680034345.01.T01:intron 10.0%
!! CTTAAAGTAAAATATTTGTA+TGG + Chr6:86031223-86031242 MsG0680034345.01.T01:intron 15.0%
!!! AAATATAGAATCTTTTGTTT+TGG + Chr6:86031034-86031053 MsG0680034345.01.T01:intron 15.0%
!!! GAATATTTTTTGATTTTACA+AGG - Chr6:86031081-86031100 None:intergenic 15.0%
!!! TAATCTGAAACAAAATTTTT+TGG - Chr6:86030488-86030507 None:intergenic 15.0%
!!! TTTGTAAAATGTTTTTAGAT+TGG - Chr6:86031150-86031169 None:intergenic 15.0%
!!! TTTTGATTTTTTTTTTTCGA+GGG - Chr6:86031103-86031122 None:intergenic 15.0%
!!! TTTTTGATTTTTTTTTTTCG+AGG - Chr6:86031104-86031123 None:intergenic 15.0%
!! AATTCAACCATTGAATTTAA+AGG - Chr6:86031312-86031331 None:intergenic 20.0%
!! ATGATAGATTCAACATAAAT+GGG + Chr6:86030765-86030784 MsG0680034345.01.T01:CDS 20.0%
!! ATTGGTCATAAAATGATAAT+GGG + Chr6:86030731-86030750 MsG0680034345.01.T01:CDS 20.0%
!! TAAAAAGATATGACATATTG+AGG + Chr6:86030898-86030917 MsG0680034345.01.T01:intron 20.0%
!! TATTGGTCATAAAATGATAA+TGG + Chr6:86030730-86030749 MsG0680034345.01.T01:CDS 20.0%
!! TTTAAATTCAATGGTTGAAT+TGG + Chr6:86031311-86031330 MsG0680034345.01.T01:intron 20.0%
!! TTTACGCTTAAATATGTATA+TGG + Chr6:86030940-86030959 MsG0680034345.01.T01:intron 20.0%
!!! CAAAATAAGATTGTTCATTT+TGG + Chr6:86031482-86031501 MsG0680034345.01.T01:intron 20.0%
!!! GTTTTTTTTTTTAGATTGGA+TGG - Chr6:86031176-86031195 None:intergenic 20.0%
! AACAACATGTAAATGAGTAA+TGG - Chr6:86032150-86032169 None:intergenic 25.0%
! AGGATTAAAACAAAACAACA+AGG - Chr6:86031061-86031080 None:intergenic 25.0%
! AGTTAGCATCAAAATTTCAT+CGG + Chr6:86031937-86031956 MsG0680034345.01.T01:intron 25.0%
! ATCTACTCCTTTAAATTCAA+TGG + Chr6:86031302-86031321 MsG0680034345.01.T01:intron 25.0%
! GATGATAGATTCAACATAAA+TGG + Chr6:86030764-86030783 MsG0680034345.01.T01:CDS 25.0%
! GTTGATCTTATAGAGAATAT+TGG + Chr6:86030713-86030732 MsG0680034345.01.T01:CDS 25.0%
! TTACTCATTTACATGTTGTT+TGG + Chr6:86032150-86032169 MsG0680034345.01.T01:CDS 25.0%
!! TACTCATTTACATGTTGTTT+GGG + Chr6:86032151-86032170 MsG0680034345.01.T01:CDS 25.0%
!! TGATTTGTACATATATCAGA+AGG - Chr6:86031730-86031749 None:intergenic 25.0%
AAAATAGTCCATGATCTATC+TGG - Chr6:86032089-86032108 None:intergenic 30.0%
AAAGATATCCAGATAGATCA+TGG + Chr6:86032078-86032097 MsG0680034345.01.T01:intron 30.0%
AAAGCCTGAGAAAAAGAAAT+TGG - Chr6:86031854-86031873 None:intergenic 30.0%
AACATACCTGAAGATCAAAT+GGG - Chr6:86030856-86030875 None:intergenic 30.0%
AACATGTAAATGAGTAATGG+AGG - Chr6:86032147-86032166 None:intergenic 30.0%
ACATTACGAAAACGAACAAT+GGG - Chr6:86031643-86031662 None:intergenic 30.0%
ACTAGCAAAAACACTATCAT+GGG - Chr6:86030462-86030481 None:intergenic 30.0%
GAAATCATCTACATTACATG+AGG + Chr6:86030667-86030686 MsG0680034345.01.T01:CDS 30.0%
GTTTCAGATTATGTCACATA+TGG + Chr6:86030497-86030516 MsG0680034345.01.T01:CDS 30.0%
TAACATACCTGAAGATCAAA+TGG - Chr6:86030857-86030876 None:intergenic 30.0%
TACATTACGAAAACGAACAA+TGG - Chr6:86031644-86031663 None:intergenic 30.0%
TACTAGCAAAAACACTATCA+TGG - Chr6:86030463-86030482 None:intergenic 30.0%
! ACTATTTTGTCGTTAGGTAA+GGG + Chr6:86032101-86032120 MsG0680034345.01.T01:intron 30.0%
!! ATGATAGTGTTTTTGCTAGT+AGG + Chr6:86030462-86030481 MsG0680034345.01.T01:CDS 30.0%
!!! ATTTTTGAGGAAGTACTTTC+TGG - Chr6:86032458-86032477 None:intergenic 30.0%
AATGTAAGTTGTAAGCTGCT+AGG + Chr6:86031658-86031677 MsG0680034345.01.T01:intron 35.0%
ACATACCTGAAGATCAAATG+GGG - Chr6:86030855-86030874 None:intergenic 35.0%
ACATGTGTGGAGTAGATTAA+TGG + Chr6:86032265-86032284 MsG0680034345.01.T01:CDS 35.0%
AGCATAACCAAACAACGATT+TGG - Chr6:86031544-86031563 None:intergenic 35.0%
AGTGGCATTTGGATTTCTTA+TGG + Chr6:86031412-86031431 MsG0680034345.01.T01:intron 35.0%
ATCAGAAGGTGAGATTAAGA+GGG - Chr6:86031716-86031735 None:intergenic 35.0%
ATCTCTGCCTTCCAATAAAA+CGG - Chr6:86031761-86031780 None:intergenic 35.0%
ATGTAAGTTGTAAGCTGCTA+GGG + Chr6:86031659-86031678 MsG0680034345.01.T01:intron 35.0%
GGCAGATTTGTGTTGAATAA+GGG + Chr6:86032004-86032023 MsG0680034345.01.T01:intron 35.0%
GTAATATTCATGCACATGTG+TGG + Chr6:86032252-86032271 MsG0680034345.01.T01:CDS 35.0%
TAAGAAAAGAGACGATAGGT+TGG - Chr6:86031393-86031412 None:intergenic 35.0%
TATCAGAAGGTGAGATTAAG+AGG - Chr6:86031717-86031736 None:intergenic 35.0%
TATGTCACATATGGTAGCAA+GGG + Chr6:86030506-86030525 MsG0680034345.01.T01:CDS 35.0%
TCATCGGAGACTTATGAAAA+AGG + Chr6:86031953-86031972 MsG0680034345.01.T01:intron 35.0%
TGAAGCATGCAATAATTGCA+TGG - Chr6:86030585-86030604 None:intergenic 35.0%
TGGCAGATTTGTGTTGAATA+AGG + Chr6:86032003-86032022 MsG0680034345.01.T01:intron 35.0%
TTATGTCACATATGGTAGCA+AGG + Chr6:86030505-86030524 MsG0680034345.01.T01:CDS 35.0%
! AGTACTTTCTGGAAGATTTG+AGG - Chr6:86032447-86032466 None:intergenic 35.0%
! CTATTTTGTCGTTAGGTAAG+GGG + Chr6:86032102-86032121 MsG0680034345.01.T01:intron 35.0%
! GACTATTTTGTCGTTAGGTA+AGG + Chr6:86032100-86032119 MsG0680034345.01.T01:intron 35.0%
! TCTCTTTTCTTAGTGGCATT+TGG + Chr6:86031401-86031420 MsG0680034345.01.T01:intron 35.0%
! TTACATGTTGTTTGGGCAAT+GGG + Chr6:86032158-86032177 MsG0680034345.01.T01:CDS 35.0%
! TTTACATGTTGTTTGGGCAA+TGG + Chr6:86032157-86032176 MsG0680034345.01.T01:CDS 35.0%
!! ATTGTGTCTGAAGTTTTCGT+TGG - Chr6:86032057-86032076 None:intergenic 35.0%
!! GATAGCAAGGGTTTACTTTT+TGG - Chr6:86031366-86031385 None:intergenic 35.0%
!! GTCATAAAATGATAATGGGC+CGG + Chr6:86030735-86030754 MsG0680034345.01.T01:CDS 35.0%
!! TCATGGACTATTTTGTCGTT+AGG + Chr6:86032095-86032114 MsG0680034345.01.T01:intron 35.0%
!!! GGTTTTTGGTTAACTCACTA+AGG + Chr6:86030645-86030664 MsG0680034345.01.T01:CDS 35.0%
AAACACTATCATGGGTCTTG+AGG - Chr6:86030454-86030473 None:intergenic 40.0%
AATTCTTGCAGCTGAAGCAA+GGG - Chr6:86032408-86032427 None:intergenic 40.0%
ACAGAGTCCAAATCGTTGTT+TGG + Chr6:86031534-86031553 MsG0680034345.01.T01:intron 40.0%
ACTTCCTCACGAATATTGGA+TGG + Chr6:86032289-86032308 MsG0680034345.01.T01:CDS 40.0%
AGGAATAGTTCAGCAGTTTG+AGG - Chr6:86030434-86030453 None:intergenic 40.0%
CCACTAAGAAAAGAGACGAT+AGG - Chr6:86031397-86031416 None:intergenic 40.0%
CTCACGAATATTGGATGGAA+AGG + Chr6:86032294-86032313 MsG0680034345.01.T01:CDS 40.0%
CTTTCCATCCAATATTCGTG+AGG - Chr6:86032296-86032315 None:intergenic 40.0%
GGAAGATTTGAGGAACTAGA+AGG - Chr6:86032437-86032456 None:intergenic 40.0%
GTGATGAAACCACAATGGTT+TGG - Chr6:86030412-86030431 None:intergenic 40.0%
TAAGATCAACCACAACCTTG+TGG - Chr6:86030703-86030722 None:intergenic 40.0%
TCCTTAGTCCATTCGAAAAG+TGG - Chr6:86032212-86032231 None:intergenic 40.0%
TGAATCTATCATCCTTGCTC+CGG - Chr6:86030757-86030776 None:intergenic 40.0%
TGAGAAAAAGAAATTGGCCC+AGG - Chr6:86031848-86031867 None:intergenic 40.0%
TGGAACTTCCTCACGAATAT+TGG + Chr6:86032285-86032304 MsG0680034345.01.T01:CDS 40.0%
TGGATATCCTTCGTTGTGTA+CGG - Chr6:86032037-86032056 None:intergenic 40.0%
TTGAGGTGATGAAACCACAA+TGG - Chr6:86030417-86030436 None:intergenic 40.0%
TTTGAGGAACTAGAAGGAAG+TGG - Chr6:86032431-86032450 None:intergenic 40.0%
! AAAGGAAGAGTTGGGGTTTT+TGG + Chr6:86030631-86030650 MsG0680034345.01.T01:CDS 40.0%
! CCTATCGTCTCTTTTCTTAG+TGG + Chr6:86031394-86031413 MsG0680034345.01.T01:intron 40.0%
! CCTTTGAGAAAGGAAGAGTT+GGG + Chr6:86030623-86030642 MsG0680034345.01.T01:CDS 40.0%
! CTTTGAGAAAGGAAGAGTTG+GGG + Chr6:86030624-86030643 MsG0680034345.01.T01:CDS 40.0%
! GATGTTTGCTCCTTTGAGAA+AGG + Chr6:86030613-86030632 MsG0680034345.01.T01:CDS 40.0%
! GGAACTATTAACTTGAAGCC+GGG + Chr6:86032179-86032198 MsG0680034345.01.T01:CDS 40.0%
! GGGAACTATTAACTTGAAGC+CGG + Chr6:86032178-86032197 MsG0680034345.01.T01:CDS 40.0%
! TCCTTTGAGAAAGGAAGAGT+TGG + Chr6:86030622-86030641 MsG0680034345.01.T01:CDS 40.0%
! TGGGCCAATTTCTTTTTCTC+AGG + Chr6:86031847-86031866 MsG0680034345.01.T01:intron 40.0%
!! GTGTGATACCACTTTTCGAA+TGG + Chr6:86032201-86032220 MsG0680034345.01.T01:CDS 40.0%
!!! ACCACTTTTCGAATGGACTA+AGG + Chr6:86032208-86032227 MsG0680034345.01.T01:CDS 40.0%
!!! CAAGGGTTTACTTTTTGGCA+TGG - Chr6:86031361-86031380 None:intergenic 40.0%
AGCGGTGAAGAGAACAACTA+GGG - Chr6:86031789-86031808 None:intergenic 45.0%
ATGTCAGTTGCAGTTGAACC+AGG - Chr6:86032382-86032401 None:intergenic 45.0%
CAAGATCTTTCATGTGGTCC+TGG + Chr6:86032361-86032380 MsG0680034345.01.T01:CDS 45.0%
CCCAACTCTTCCTTTCTCAA+AGG - Chr6:86030626-86030645 None:intergenic 45.0%
CGATAAACCGTACACAACGA+AGG + Chr6:86032027-86032046 MsG0680034345.01.T01:intron 45.0%
CTCTCGCAAGATCTTTCATG+TGG + Chr6:86032355-86032374 MsG0680034345.01.T01:CDS 45.0%
GAATTCTTGCAGCTGAAGCA+AGG - Chr6:86032409-86032428 None:intergenic 45.0%
GGGAATTCACAGTTCAGAGA+AGG - Chr6:86031696-86031715 None:intergenic 45.0%
GTGACAATTGGCGCAATATG+AGG + Chr6:86030549-86030568 MsG0680034345.01.T01:CDS 45.0%
GTTTGCAAGAGAAACTTGCG+TGG + Chr6:86031983-86032002 MsG0680034345.01.T01:intron 45.0%
TCACCGAGTATGGTGACAAT+TGG + Chr6:86030537-86030556 MsG0680034345.01.T01:CDS 45.0%
TCGAAAAGTGGTATCACACC+CGG - Chr6:86032200-86032219 None:intergenic 45.0%
TGAGGTTGTTGATGTCCACA+AGG + Chr6:86030685-86030704 MsG0680034345.01.T01:CDS 45.0%
TGCCTTCCAATAAAACGGCA+TGG - Chr6:86031756-86031775 None:intergenic 45.0%
TGTTGATGTCCACAAGGTTG+TGG + Chr6:86030691-86030710 MsG0680034345.01.T01:CDS 45.0%
TTCACGTGAAATCGCAAGTG+CGG + Chr6:86032319-86032338 MsG0680034345.01.T01:CDS 45.0%
TTGGACTCGTCCTAACTTCA+AGG - Chr6:86030393-86030412 None:intergenic 45.0%
TTGTCATGCGAAGAAAGCTG+AGG - Chr6:86031887-86031906 None:intergenic 45.0%
! ATAGGTTGGCACAGATAGCA+AGG - Chr6:86031379-86031398 None:intergenic 45.0%
! CACCATACTCGGTGAAAGTT+AGG - Chr6:86030532-86030551 None:intergenic 45.0%
! TAGGTTGGCACAGATAGCAA+GGG - Chr6:86031378-86031397 None:intergenic 45.0%
!!! TCACTGCCATGCCGTTTTAT+TGG + Chr6:86031747-86031766 MsG0680034345.01.T01:intron 45.0%
!!! TGCCATGCCGTTTTATTGGA+AGG + Chr6:86031751-86031770 MsG0680034345.01.T01:intron 45.0%
AGGACGAGTCCAAACCATTG+TGG + Chr6:86030400-86030419 MsG0680034345.01.T01:CDS 50.0%
CAGCGGTGAAGAGAACAACT+AGG - Chr6:86031790-86031809 None:intergenic 50.0%
GCGCCAATTGTCACCATACT+CGG - Chr6:86030543-86030562 None:intergenic 50.0%
GCTAGCCCCATTTGATCTTC+AGG + Chr6:86030847-86030866 MsG0680034345.01.T01:CDS 50.0%
GGCCTAACTTTCACCGAGTA+TGG + Chr6:86030527-86030546 MsG0680034345.01.T01:CDS 50.0%
GGTGAAGAGAACAACTAGGG+AGG - Chr6:86031786-86031805 None:intergenic 50.0%
TTGTTCTCTTCACCGCTGTG+CGG + Chr6:86031792-86031811 MsG0680034345.01.T01:intron 50.0%
! ATCTAGCTGACTTCGTGCCA+AGG + Chr6:86030825-86030844 MsG0680034345.01.T01:CDS 50.0%
!! AATGATAATGGGCCGGAGCA+AGG + Chr6:86030742-86030761 MsG0680034345.01.T01:CDS 50.0%
!! AGATCAAATGGGGCTAGCCT+TGG - Chr6:86030845-86030864 None:intergenic 50.0%
ACTGCCTCACCTCAGATGGA+AGG - Chr6:86031920-86031939 None:intergenic 55.0%
CTACACCAGCCTTCCATCTG+AGG + Chr6:86031908-86031927 MsG0680034345.01.T01:intron 55.0%
GCTAACTGCCTCACCTCAGA+TGG - Chr6:86031924-86031943 None:intergenic 55.0%
GTGCAGTCACAAGTGCGGTA+GGG - Chr6:86031826-86031845 None:intergenic 55.0%
TGCAGTCACAAGTGCGGTAG+GGG - Chr6:86031825-86031844 None:intergenic 55.0%
TGTTCTCTTCACCGCTGTGC+GGG + Chr6:86031793-86031812 MsG0680034345.01.T01:intron 55.0%
ACCGCACTTGTGACTGCACC+TGG + Chr6:86031827-86031846 MsG0680034345.01.T01:intron 60.0%
CCCAGGTGCAGTCACAAGTG+CGG - Chr6:86031831-86031850 None:intergenic 60.0%
CCGCACTTGTGACTGCACCT+GGG + Chr6:86031828-86031847 MsG0680034345.01.T01:intron 60.0%
CCTCACCTCAGATGGAAGGC+TGG - Chr6:86031916-86031935 None:intergenic 60.0%
GCAGTCACAAGTGCGGTAGG+GGG - Chr6:86031824-86031843 None:intergenic 60.0%
GGTGCAGTCACAAGTGCGGT+AGG - Chr6:86031827-86031846 None:intergenic 60.0%
! CCAGCCTTCCATCTGAGGTG+AGG + Chr6:86031913-86031932 MsG0680034345.01.T01:intron 60.0%
AGGGGGTTGAACCCGCACAG+CGG - Chr6:86031807-86031826 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr6 gene 86030386 86032487 86030386 ID=MsG0680034345.01;Name=MsG0680034345.01
Chr6 mRNA 86030386 86032487 86030386 ID=MsG0680034345.01.T01;Parent=MsG0680034345.01;Name=MsG0680034345.01.T01;_AED=0.63;_eAED=0.63;_QI=0|0|0|0.5|1|1|2|0|282
Chr6 exon 86030386 86030868 86030386 ID=MsG0680034345.01.T01:exon:18106;Parent=MsG0680034345.01.T01
Chr6 exon 86032122 86032487 86032122 ID=MsG0680034345.01.T01:exon:18107;Parent=MsG0680034345.01.T01
Chr6 CDS 86030386 86030868 86030386 ID=MsG0680034345.01.T01:cds;Parent=MsG0680034345.01.T01
Chr6 CDS 86032122 86032487 86032122 ID=MsG0680034345.01.T01:cds;Parent=MsG0680034345.01.T01
Gene Sequence

>MsG0680034345.01.T01

ATGTCCTTGAAGTTAGGACGAGTCCAAACCATTGTGGTTTCATCACCTCAAACTGCTGAACTATTCCTCAAGACCCATGATAGTGTTTTTGCTAGTAGGCCAAAAAATTTTGTTTCAGATTATGTCACATATGGTAGCAAGGGCCTAACTTTCACCGAGTATGGTGACAATTGGCGCAATATGAGGAAATTGTGTACCATGCAATTATTGCATGCTTCAAAAGTTGAGATGTTTGCTCCTTTGAGAAAGGAAGAGTTGGGGTTTTTGGTTAACTCACTAAGGAAATCATCTACATTACATGAGGTTGTTGATGTCCACAAGGTTGTGGTTGATCTTATAGAGAATATTGGTCATAAAATGATAATGGGCCGGAGCAAGGATGATAGATTCAACATAAATGGGATTATTCACGAAGCAATGAATTTGATTGAAGTTTTTAATCTAGCTGACTTCGTGCCAAGGCTAGCCCCATTTGATCTTCAGGGGTATTATGAATTTTCTTTTACCTCCATTACTCATTTACATGTTGTTTGGGCAATGGGAACTATTAACTTGAAGCCGGGTGTGATACCACTTTTCGAATGGACTAAGGATTTCAATATGCATATACAACGTAATATTCATGCACATGTGTGGAGTAGATTAATGGAACTTCCTCACGAATATTGGATGGAAAGGACTTCACGTGAAATCGCAAGTGCGGTTGACATAGATTTCTCTCGCAAGATCTTTCATGTGGTCCTGGTTCAACTGCAACTGACATGCTCCCTTGCTTCAGCTGCAAGAATTCCACTTCCTTCTAGTTCCTCAAATCTTCCAGAAAGTACTTCCTCAAAAATTCCCCCTTGA
Protein sequence

>MsG0680034345.01.T01

MSLKLGRVQTIVVSSPQTAELFLKTHDSVFASRPKNFVSDYVTYGSKGLTFTEYGDNWRNMRKLCTMQLLHASKVEMFAPLRKEELGFLVNSLRKSSTLHEVVDVHKVVVDLIENIGHKMIMGRSKDDRFNINGIIHEAMNLIEVFNLADFVPRLAPFDLQGYYEFSFTSITHLHVVWAMGTINLKPGVIPLFEWTKDFNMHIQRNIHAHVWSRLMELPHEYWMERTSREIASAVDIDFSRKIFHVVLVQLQLTCSLASAARIPLPSSSSNLPESTSSKIPP*