AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680034373.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680034373.01.T01 MTR_6g065070 95.805 739 31 0 97 835 1 739 0.0 1451
MsG0680034373.01.T01 MTR_1g077090 63.280 817 231 13 77 835 16 821 0.0 981
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680034373.01.T01 AT5G08450 52.248 823 283 18 111 833 104 916 0.0 746
MsG0680034373.01.T01 AT5G08450 52.248 823 283 18 111 833 104 916 0.0 746
MsG0680034373.01.T01 AT5G08450 52.248 823 283 18 111 833 104 916 0.0 746

Find 217 sgRNAs with CRISPR-Local

Find 652 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAATACTTTATGTTCTTATC+TGG 0.142978 6:+86507953 MsG0680034373.01.T01:three_prime_UTR
TTCTGCTTCTTGATCTTCTT+TGG 0.209794 6:-86501607 None:intergenic
GGAAAGACTCGAAAGATTTC+AGG 0.228887 6:+86501292 MsG0680034373.01.T01:CDS
ACTGACAAGCAAGGGTTATT+TGG 0.257834 6:+86500813 MsG0680034373.01.T01:CDS
TCTTTGTGTTTCTTCTGTTC+TGG 0.270053 6:-86501789 None:intergenic
CAAGCTGGTGTTTGGATTGC+AGG 0.274430 6:+86507758 MsG0680034373.01.T01:CDS
CGCAAAAGATAGGGACTCTT+TGG 0.301391 6:+86501410 MsG0680034373.01.T01:CDS
AAGAGTTGCGCACATGCATT+AGG 0.315605 6:+86504105 MsG0680034373.01.T01:CDS
CGAGCTTGGGGTGCTTCAAC+TGG 0.323093 6:+86505729 MsG0680034373.01.T01:CDS
GCCAATCTTGAAGCTCGTTT+TGG 0.326274 6:+86502035 MsG0680034373.01.T01:CDS
CCCTTCATTGTCTTGGGCGT+GGG 0.332868 6:-86502060 None:intergenic
TCAGATTTAAAGCGCTTATC+AGG 0.335830 6:-86501891 None:intergenic
TATGGTCTCAAGCTGGTGTT+TGG 0.338899 6:+86507750 MsG0680034373.01.T01:CDS
ATGACTATCCCTTTCATGTC+TGG 0.354344 6:-86501202 None:intergenic
TGATTCTCCTGGTGGGAGTT+TGG 0.355744 6:+86501329 MsG0680034373.01.T01:CDS
AGAATCCAACCGCAAAAGAT+AGG 0.366718 6:+86501400 MsG0680034373.01.T01:CDS
AAGGGTGCATTTCATGTCAA+TGG 0.367428 6:+86507799 MsG0680034373.01.T01:CDS
CACTGTTGGGCGACAGTAAC+CGG 0.369234 6:-86504060 None:intergenic
GTGACATAGGTCAGGATTCT+CGG 0.374280 6:+86500962 MsG0680034373.01.T01:CDS
AACTACCAGGGCTGCAGCTT+CGG 0.375205 6:+86506124 MsG0680034373.01.T01:CDS
GGGAACGCACATTGTTTCTC+AGG 0.377862 6:-86505707 None:intergenic
CAATGTGCGTTCCCGAGCTT+GGG 0.378162 6:+86505716 MsG0680034373.01.T01:CDS
GAAGGGAGAAGTTCTGTATC+TGG 0.391043 6:+86506934 MsG0680034373.01.T01:CDS
CAGTCAGAAGATGGATTTGC+TGG 0.394804 6:+86501918 MsG0680034373.01.T01:CDS
CCTCTACATGTTCGAGAGGC+AGG 0.394902 6:-86507580 None:intergenic
GAAAATACCCTTCATTGTCT+TGG 0.395679 6:-86502067 None:intergenic
GAGAAACAAAGTCACAATTA+AGG 0.397590 6:-86498611 None:intergenic
AGATCAAGAAGCAGAAAAGT+TGG 0.398088 6:+86501614 MsG0680034373.01.T01:CDS
GTGTCAGGCAACTGAGTTGC+TGG 0.402309 6:-86507413 None:intergenic
CAATAGCTGATGTGTAAGTA+TGG 0.404572 6:-86506064 None:intergenic
CTCACCACTTTGAGTTTACC+AGG 0.405175 6:-86498661 None:intergenic
TTTCGAGTCTTTCCAATTCA+AGG 0.406758 6:-86501283 None:intergenic
TTGCTGACAAAGGACTAAAA+AGG 0.407474 6:+86506885 MsG0680034373.01.T01:CDS
TGGTGAAGATTTGAAGGCTT+TGG 0.410608 6:+86497234 MsG0680034373.01.T01:CDS
AATACTTTATGTTCTTATCT+GGG 0.416558 6:+86507954 MsG0680034373.01.T01:three_prime_UTR
ATCCAATTGGAACTGATAAC+AGG 0.419052 6:+86501088 MsG0680034373.01.T01:CDS
TGCTAGAAGAAAATATAGAT+TGG 0.419113 6:+86507717 MsG0680034373.01.T01:CDS
AGGTCAGAGGTGCCCAGCTA+TGG 0.420308 6:+86503878 MsG0680034373.01.T01:intron
TGGTTAGCAGCCCCTTGAAT+TGG 0.421216 6:+86501271 MsG0680034373.01.T01:CDS
AAGACAGAGAAGGTCACATT+TGG 0.421825 6:+86501246 MsG0680034373.01.T01:CDS
AGAGAAGGTCACATTTGGTT+TGG 0.422487 6:+86501251 MsG0680034373.01.T01:CDS
ACAATGTGCGTTCCCGAGCT+TGG 0.422624 6:+86505715 MsG0680034373.01.T01:CDS
GTCATTTGGTGAAGATTTGA+AGG 0.423691 6:+86497228 MsG0680034373.01.T01:CDS
TTCTCCTTTCCGACTTCTGT+TGG 0.426032 6:-86501381 None:intergenic
ACCCTTCATTGTCTTGGGCG+TGG 0.427473 6:-86502061 None:intergenic
ATGGTCCCACTCTTGAAATT+CGG 0.429546 6:+86503277 MsG0680034373.01.T01:CDS
AAAATACCCTTCATTGTCTT+GGG 0.431209 6:-86502066 None:intergenic
GATGCTGAACATTACAACTA+TGG 0.431509 6:-86501974 None:intergenic
TCCCCTCCCTGTAGCTATAG+AGG 0.431735 6:+86507983 MsG0680034373.01.T01:three_prime_UTR
GAACGGGACAATGATTTAGA+AGG 0.437909 6:+86501861 MsG0680034373.01.T01:CDS
TATGACTCAGATCTTGTTGC+TGG 0.439179 6:+86503919 MsG0680034373.01.T01:CDS
GGTAACACAGTTTCGCGCTT+AGG 0.443356 6:-86501768 None:intergenic
CAGTTGCCTGACACAGATAT+AGG 0.443436 6:+86507422 MsG0680034373.01.T01:CDS
ACGACGGGAAACATCAAGAT+TGG 0.443654 6:+86501505 MsG0680034373.01.T01:CDS
AATACAGCCTCTATAGCTAC+AGG 0.443826 6:-86507990 None:intergenic
TAGATTGGGAAGATATTCTA+TGG 0.444114 6:+86507732 MsG0680034373.01.T01:CDS
TGCAGAAAGAAAACAGTGTT+GGG 0.445075 6:+86507848 MsG0680034373.01.T01:three_prime_UTR
TCATATAATGAGAAGGAAGT+TGG 0.445110 6:+86501726 MsG0680034373.01.T01:CDS
CGACGGGAAACATCAAGATT+GGG 0.448003 6:+86501506 MsG0680034373.01.T01:CDS
AATGCAATGCAACGGTCATT+TGG 0.448149 6:+86497214 MsG0680034373.01.T01:CDS
CATCACATGCATACCACAAA+TGG 0.452035 6:+86507458 MsG0680034373.01.T01:CDS
ATCCTGTTATCAGTTCCAAT+TGG 0.455136 6:-86501090 None:intergenic
GACTTTCCTATATCTGTGTC+AGG 0.455625 6:-86507428 None:intergenic
GCCTCTATAGCTACAGGGAG+GGG 0.462646 6:-86507984 None:intergenic
GGTCAGAGGTGCCCAGCTAT+GGG 0.463946 6:+86503879 MsG0680034373.01.T01:intron
TCGAAAGCAATGCAGAAGAC+TGG 0.464115 6:+86497190 None:intergenic
TGAGAATCATTTGAAGATAA+CGG 0.465502 6:-86501057 None:intergenic
GAGGCTGTATTGAAATTCTC+AGG 0.467996 6:+86508002 MsG0680034373.01.T01:three_prime_UTR
CGCATCACTTCCTGAGGTAG+AGG 0.469613 6:-86507542 None:intergenic
GTTGCTTTCATTAGTTTCGA+TGG 0.469714 6:+86500924 MsG0680034373.01.T01:CDS
GTTATCTTCAAATGATTCTC+AGG 0.471459 6:+86501059 MsG0680034373.01.T01:CDS
GTCTTCACTCTCTTTCTCTC+CGG 0.474074 6:-86501952 None:intergenic
TCTCAGGCAGATCATCCAAT+TGG 0.475868 6:+86501075 MsG0680034373.01.T01:CDS
TTCGAGTCTTTCCAATTCAA+GGG 0.477286 6:-86501282 None:intergenic
GCGAAGACATTTCGTGTTGA+AGG 0.477515 6:+86500988 MsG0680034373.01.T01:CDS
GCTAGAAGAAAATATAGATT+GGG 0.478491 6:+86507718 MsG0680034373.01.T01:CDS
TGGTGTTTGGATTGCAGGAA+AGG 0.480744 6:+86507763 MsG0680034373.01.T01:CDS
GAAAGGAATATGCCCTTTCA+AGG 0.481329 6:+86507780 MsG0680034373.01.T01:CDS
CAATGGATTAGTGCATTTCA+AGG 0.483422 6:+86507816 MsG0680034373.01.T01:exon
TCCAAAACGAGCTTCAAGAT+TGG 0.483499 6:-86502036 None:intergenic
TGTACCAATGGCTGTTGAGC+GGG 0.486616 6:+86506097 MsG0680034373.01.T01:CDS
ACATGAAATGCACCCTTGAA+AGG 0.486818 6:-86507793 None:intergenic
TACATCTGCTCGCTTGAAGA+AGG 0.488802 6:+86506916 MsG0680034373.01.T01:CDS
AGAGTTGCGCACATGCATTA+GGG 0.491064 6:+86504106 MsG0680034373.01.T01:CDS
TCTGGTATTTCAGGTAAAGC+AGG 0.492631 6:+86503141 MsG0680034373.01.T01:intron
GCGCAACTCTTGTATGGCCG+CGG 0.494212 6:-86504093 None:intergenic
CTGATAACAGGATAGAATCA+AGG 0.495121 6:+86501100 MsG0680034373.01.T01:CDS
TAGAGATAGGAGGAAAGAAC+GGG 0.497488 6:+86501845 MsG0680034373.01.T01:CDS
CGCAACTCTTGTATGGCCGC+GGG 0.501041 6:-86504092 None:intergenic
TTGATGGTGAAACTAGAGAT+AGG 0.504130 6:+86501832 MsG0680034373.01.T01:CDS
CAGTTGAAGCACCCCAAGCT+CGG 0.504869 6:-86505728 None:intergenic
GATAGTCATAATGATACAAA+AGG 0.506097 6:+86501216 MsG0680034373.01.T01:CDS
TCTGAGAAGCAGTCAGAAGA+TGG 0.509484 6:+86501909 MsG0680034373.01.T01:CDS
GAAAGACTCGAAAGATTTCA+GGG 0.510220 6:+86501293 MsG0680034373.01.T01:CDS
ACTTTGAGTTTACCAGGCTT+AGG 0.515621 6:-86498655 None:intergenic
CCTTCATTGTCTTGGGCGTG+GGG 0.519558 6:-86502059 None:intergenic
CGGGAGGACGAGACACTGTT+GGG 0.520147 6:-86504073 None:intergenic
GCATGTGCGCAACTCTTGTA+TGG 0.521075 6:-86504099 None:intergenic
AATGGATTAGTGCATTTCAA+GGG 0.522915 6:+86507817 MsG0680034373.01.T01:exon
GTAATGTTCAGCATCGTAAG+AGG 0.524505 6:+86501982 MsG0680034373.01.T01:CDS
AGAAGTTTCATATAATGAGA+AGG 0.525892 6:+86501719 MsG0680034373.01.T01:CDS
TTGTAAGAAGCCTCTACCTC+AGG 0.525984 6:+86507532 MsG0680034373.01.T01:CDS
TTTGAGGTTTATGACCGAGT+TGG 0.526097 6:+86500853 MsG0680034373.01.T01:CDS
TATTTCCATGTGACATATGT+CGG 0.527334 6:-86501356 None:intergenic
GCTCAACAGCCATTGGTACA+AGG 0.528111 6:-86506094 None:intergenic
TTGGAAGCTCATGAGACTGT+TGG 0.529043 6:+86501429 MsG0680034373.01.T01:CDS
CATGAAATGCACCCTTGAAA+GGG 0.529407 6:-86507792 None:intergenic
ATGCAGAAAGAAAACAGTGT+TGG 0.530307 6:+86507847 MsG0680034373.01.T01:three_prime_UTR
AGAAGCAGAAAAGTTGGAGA+AGG 0.531968 6:+86501620 MsG0680034373.01.T01:CDS
AGTTGAAGCACCCCAAGCTC+GGG 0.532468 6:-86505727 None:intergenic
TGACATAGGTCAGGATTCTC+GGG 0.533538 6:+86500963 MsG0680034373.01.T01:CDS
ATCTGGAGTCACACTCATGC+AGG 0.535009 6:+86506951 MsG0680034373.01.T01:CDS
CAGGAAGTGATGCGCACAGT+TGG 0.535280 6:+86507551 MsG0680034373.01.T01:CDS
ACAAACCGAAGCTGCAGCCC+TGG 0.535611 6:-86506129 None:intergenic
ATTTCCATGTGACATATGTC+GGG 0.536231 6:-86501355 None:intergenic
TTGAGCGGGCAATAACTACC+AGG 0.537496 6:+86506111 MsG0680034373.01.T01:CDS
CGAAAGCAATGCAGAAGACT+GGG 0.537653 6:+86497191 None:intergenic
CTCTACATGTTCGAGAGGCA+GGG 0.539449 6:-86507579 None:intergenic
TCACATGTTACATATAAAGT+TGG 0.539742 6:+86503168 MsG0680034373.01.T01:CDS
GAGGGAATCAATGAATGGAA+TGG 0.540843 6:+86501692 MsG0680034373.01.T01:CDS
GAATCCAACCGCAAAAGATA+GGG 0.542318 6:+86501401 MsG0680034373.01.T01:CDS
CAAGGGCACCAGACATGAAA+GGG 0.543176 6:+86501194 MsG0680034373.01.T01:CDS
ATGAAGAGGGAATCAATGAA+TGG 0.544558 6:+86501687 MsG0680034373.01.T01:CDS
TGGACAGTTCTCATGCATAC+CGG 0.545006 6:+86504041 MsG0680034373.01.T01:intron
TGAGCCCACCCTTGTACCAA+TGG 0.545565 6:+86506085 MsG0680034373.01.T01:CDS
TCTACATGTTCGAGAGGCAG+GGG 0.549836 6:-86507578 None:intergenic
GTAGCAGTAACATTCTCAGC+TGG 0.550884 6:-86503303 None:intergenic
ATTGCCCGCTCAACAGCCAT+TGG 0.551295 6:-86506101 None:intergenic
CTAGAGATAGGAGGAAAGAA+CGG 0.554092 6:+86501844 MsG0680034373.01.T01:CDS
CGTTCCTCGTGACATAGGTC+AGG 0.554479 6:+86500954 MsG0680034373.01.T01:CDS
AAAAGATATGGTGATTCTCC+TGG 0.554755 6:+86501318 MsG0680034373.01.T01:CDS
GATAGAATCAAGGGATCTGA+AGG 0.558512 6:+86501110 MsG0680034373.01.T01:CDS
TCACAATTGACGTATTTCGT+TGG 0.560754 6:+86507504 MsG0680034373.01.T01:CDS
AAAGCTGAAAGCTCTAATGA+TGG 0.566851 6:+86503258 MsG0680034373.01.T01:CDS
CCCCACGCCCAAGACAATGA+AGG 0.567987 6:+86502059 MsG0680034373.01.T01:CDS
GCGGGAGGACGAGACACTGT+TGG 0.568984 6:-86504074 None:intergenic
TTGCAGTTACTGACAAGCAA+GGG 0.570799 6:+86500805 MsG0680034373.01.T01:intron
GACAGCGGGAAAACTGTTGA+TGG 0.573038 6:+86501816 MsG0680034373.01.T01:CDS
AATGAGAAGGAAGTTGGTGA+TGG 0.573345 6:+86501732 MsG0680034373.01.T01:CDS
CACCACGTTCCTCGTGACAT+AGG 0.575137 6:+86500949 MsG0680034373.01.T01:CDS
ACAACCTCTGCAATGAGCCC+TGG 0.576506 6:+86506610 MsG0680034373.01.T01:CDS
TTTCAAAAGAGCACATGAAG+AGG 0.577396 6:+86501673 MsG0680034373.01.T01:CDS
ACAGCCATTGGTACAAGGGT+GGG 0.577624 6:-86506089 None:intergenic
ACAAGGGCACCAGACATGAA+AGG 0.578127 6:+86501193 MsG0680034373.01.T01:CDS
GGAACGCACATTGTTTCTCA+GGG 0.578508 6:-86505706 None:intergenic
TCGAGTCTTTCCAATTCAAG+GGG 0.578918 6:-86501281 None:intergenic
CGGGAATCCAAACTCCCACC+AGG 0.579789 6:-86501336 None:intergenic
AACACAAAGATGTTGACAGC+GGG 0.580282 6:+86501802 MsG0680034373.01.T01:CDS
TCGTGTTGAAGGTCGTGATG+CGG 0.580804 6:+86500999 MsG0680034373.01.T01:CDS
ATCAGCATTGTTGCTGACAA+AGG 0.581033 6:+86506875 MsG0680034373.01.T01:CDS
TCAGAGGTGCCCAGCTATGG+GGG 0.584412 6:+86503881 MsG0680034373.01.T01:CDS
GACACACATCCTTCTCGCTA+CGG 0.584419 6:-86501146 None:intergenic
TTCAAAAGAGCACATGAAGA+GGG 0.584500 6:+86501674 MsG0680034373.01.T01:CDS
AACAGTGTCTCGTCCTCCCG+CGG 0.584562 6:+86504076 MsG0680034373.01.T01:CDS
ACTCATGCTAAGCCTAAGCC+TGG 0.586190 6:+86498643 MsG0680034373.01.T01:CDS
ACATCAAGATTGGGGAGACA+AGG 0.586264 6:+86501515 MsG0680034373.01.T01:CDS
AACTCTTGTATGGCCGCGGG+AGG 0.586523 6:-86504089 None:intergenic
AACAGCCATTGGTACAAGGG+TGG 0.588434 6:-86506090 None:intergenic
GATATTCTATGGTCTCAAGC+TGG 0.590788 6:+86507743 MsG0680034373.01.T01:CDS
TTGAAGAAGTCTCTCCAACT+CGG 0.591073 6:-86500867 None:intergenic
CTCAACAGCCATTGGTACAA+GGG 0.594382 6:-86506093 None:intergenic
ACATCTGCTCGCTTGAAGAA+GGG 0.596110 6:+86506917 MsG0680034373.01.T01:CDS
TGATAACAGGATAGAATCAA+GGG 0.604065 6:+86501101 MsG0680034373.01.T01:CDS
TTTGCAGTTACTGACAAGCA+AGG 0.604565 6:+86500804 MsG0680034373.01.T01:intron
AGAACTGATCAAGTTGTGGA+AGG 0.605562 6:+86503203 MsG0680034373.01.T01:CDS
GTCAGAGGTGCCCAGCTATG+GGG 0.606224 6:+86503880 MsG0680034373.01.T01:CDS
TTTGCTGGTGAGGAAGAGAC+CGG 0.607543 6:+86501933 MsG0680034373.01.T01:CDS
GCTTCAAGATTGGCGACTAG+AGG 0.609433 6:-86502026 None:intergenic
AGATATGGTGATTCTCCTGG+TGG 0.609645 6:+86501321 MsG0680034373.01.T01:CDS
TTGTACCAATGGCTGTTGAG+CGG 0.609900 6:+86506096 MsG0680034373.01.T01:CDS
GGAAATACACCAACAGAAGT+CGG 0.610147 6:+86501372 MsG0680034373.01.T01:CDS
ACACAAGTTAACAATAACAT+TGG 0.611542 6:+86501567 MsG0680034373.01.T01:CDS
TCGAGCAGATGACAGCAACA+AGG 0.612879 6:+86501176 MsG0680034373.01.T01:CDS
ATGGATTAGTGCATTTCAAG+GGG 0.613844 6:+86507818 MsG0680034373.01.T01:exon
CCTGCCTCTCGAACATGTAG+AGG 0.616008 6:+86507580 MsG0680034373.01.T01:CDS
AGAAGATGGATTTGCTGGTG+AGG 0.616346 6:+86501923 MsG0680034373.01.T01:CDS
TAGAGATATCCGTAGCGAGA+AGG 0.617677 6:+86501137 MsG0680034373.01.T01:CDS
GGTATCCGAATTTCAAGAGT+GGG 0.619858 6:-86503282 None:intergenic
AGCCTCTATAGCTACAGGGA+GGG 0.622403 6:-86507985 None:intergenic
GCATCTACATCAAGATTCAG+AGG 0.622583 6:+86500891 MsG0680034373.01.T01:CDS
TGCTAGAACTGATCAAGTTG+TGG 0.624207 6:+86503199 MsG0680034373.01.T01:CDS
AAAGGAATATGCCCTTTCAA+GGG 0.625026 6:+86507781 MsG0680034373.01.T01:CDS
AGGTGATATTAAGACAGAGA+AGG 0.625832 6:+86501236 MsG0680034373.01.T01:CDS
GATTCCCGACATATGTCACA+TGG 0.626898 6:+86501351 MsG0680034373.01.T01:CDS
ATGTGATAAACTGAATGAAG+AGG 0.630312 6:-86501033 None:intergenic
TGAGCGGTGTTGCATTGTGA+AGG 0.630846 6:+86505767 MsG0680034373.01.T01:CDS
CCCACGCCCAAGACAATGAA+GGG 0.631679 6:+86502060 MsG0680034373.01.T01:CDS
CATACCAGGGCTCATTGCAG+AGG 0.637544 6:-86506614 None:intergenic
TACACCAACAGAAGTCGGAA+AGG 0.639746 6:+86501377 MsG0680034373.01.T01:CDS
TAAGCCTGGTAAACTCAAAG+TGG 0.644907 6:+86498657 MsG0680034373.01.T01:CDS
GATATGGTGATTCTCCTGGT+GGG 0.646311 6:+86501322 MsG0680034373.01.T01:CDS
TGGTATCCGAATTTCAAGAG+TGG 0.646554 6:-86503283 None:intergenic
GACGGGAAACATCAAGATTG+GGG 0.648089 6:+86501507 MsG0680034373.01.T01:CDS
TAATAGGACATACAATCTTG+CGG 0.650396 6:-86504137 None:intergenic
CGAGCAGATGACAGCAACAA+GGG 0.653980 6:+86501177 MsG0680034373.01.T01:CDS
AATACCTCTACATGTTCGAG+AGG 0.654561 6:-86507584 None:intergenic
AATGTGCGTTCCCGAGCTTG+GGG 0.659244 6:+86505717 MsG0680034373.01.T01:CDS
ACGCACATTGTTTCTCAGGG+TGG 0.662163 6:-86505703 None:intergenic
ATGGTGAAACTAGAGATAGG+AGG 0.662459 6:+86501835 MsG0680034373.01.T01:CDS
AGACTGGGAATGCAATGCAA+CGG 0.663212 6:+86497206 MsG0680034373.01.T01:CDS
AAGCGAGCAGATGTATAGAG+TGG 0.669170 6:-86506908 None:intergenic
GCTTAGCATGAGTAGCAATG+AGG 0.681485 6:-86498633 None:intergenic
CTACATGTTCGAGAGGCAGG+GGG 0.683321 6:-86507577 None:intergenic
ACTGTGCGCATCACTTCCTG+AGG 0.686151 6:-86507548 None:intergenic
CATAGGTCAGGATTCTCGGG+TGG 0.687995 6:+86500966 MsG0680034373.01.T01:CDS
ATACAGCCTCTATAGCTACA+GGG 0.688002 6:-86507989 None:intergenic
CAGCCTCTATAGCTACAGGG+AGG 0.690340 6:-86507986 None:intergenic
AAAGACTCGAAAGATTTCAG+GGG 0.691818 6:+86501294 MsG0680034373.01.T01:CDS
GCTGATGTGTAAGTATGGCA+TGG 0.702618 6:-86506059 None:intergenic
GACCTATGTCACGAGGAACG+TGG 0.708442 6:-86500951 None:intergenic
TAGGACATACAATCTTGCGG+AGG 0.710553 6:-86504134 None:intergenic
TGAGCGGGCAATAACTACCA+GGG 0.714153 6:+86506112 MsG0680034373.01.T01:CDS
GAATCCTGACCTATGTCACG+AGG 0.727665 6:-86500958 None:intergenic
AAACACAAAGATGTTGACAG+CGG 0.728361 6:+86501801 MsG0680034373.01.T01:CDS
TGGATTAGTGCATTTCAAGG+GGG 0.730955 6:+86507819 MsG0680034373.01.T01:exon
CTATGTCACGAGGAACGTGG+TGG 0.739528 6:-86500948 None:intergenic
CTATGAATCAGAATACATCG+CGG 0.791190 6:+86506553 MsG0680034373.01.T01:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTAAAATAAAAAAT+GGG - Chr6:86498758-86498777 None:intergenic 0.0%
!!! TTTTTTTTTAAAATAAAAAA+TGG - Chr6:86498759-86498778 None:intergenic 0.0%
!! TAAAAAATAAAATAGAACAA+AGG - Chr6:86502773-86502792 None:intergenic 10.0%
!! TTTAATATTTACTTTGTATT+CGG + Chr6:86504948-86504967 MsG0680034373.01.T01:intron 10.0%
!!! AAAAATTAGATAACATATTT+TGG - Chr6:86505137-86505156 None:intergenic 10.0%
!!! CTATAATAAATTGTTTTTTT+AGG - Chr6:86499155-86499174 None:intergenic 10.0%
!!! GTAATATAAATTTTTAAGTT+CGG + Chr6:86498904-86498923 MsG0680034373.01.T01:intron 10.0%
!!! TAATATAAATTTTTAAGTTC+GGG + Chr6:86498905-86498924 MsG0680034373.01.T01:intron 10.0%
!!! TCTAATTTTTATTTTATAAG+TGG + Chr6:86505147-86505166 MsG0680034373.01.T01:intron 10.0%
!!! TTATATTTTTTTGAGTAAAT+AGG - Chr6:86499089-86499108 None:intergenic 10.0%
!!! TTTTTTAAGATTATATTAAG+TGG + Chr6:86504380-86504399 MsG0680034373.01.T01:intron 10.0%
!! AAAAAAAATATACTATACAC+TGG + Chr6:86504216-86504235 MsG0680034373.01.T01:intron 15.0%
!! AAAAAAACAACATTATGAAA+CGG - Chr6:86507189-86507208 None:intergenic 15.0%
!! ATAAAAAAAGAAAACAGAAA+TGG - Chr6:86505228-86505247 None:intergenic 15.0%
!! ATATTATTATAATAACCATC+AGG + Chr6:86506840-86506859 MsG0680034373.01.T01:intron 15.0%
!! CTTAAAAAGAATATTTAGAT+TGG + Chr6:86502440-86502459 MsG0680034373.01.T01:intron 15.0%
!! TAAAAAAAGAAAACAGAAAT+GGG - Chr6:86505227-86505246 None:intergenic 15.0%
!! TAAGTATTAAAAAACATTTG+TGG + Chr6:86500582-86500601 MsG0680034373.01.T01:intron 15.0%
!! TAATTTATGGAAATCTAAAA+AGG + Chr6:86507229-86507248 MsG0680034373.01.T01:intron 15.0%
!! TTAATATTTACTTTGTATTC+GGG + Chr6:86504949-86504968 MsG0680034373.01.T01:intron 15.0%
!! TTATTCAATGAATCTAAAAA+AGG + Chr6:86498350-86498369 MsG0680034373.01.T01:intron 15.0%
!! TTTAGTATCAAAATGAAAAA+AGG + Chr6:86498502-86498521 MsG0680034373.01.T01:intron 15.0%
!!! AATAATGGTTATTTTTACAA+CGG - Chr6:86498704-86498723 None:intergenic 15.0%
!!! AATATAAATTTTTAAGTTCG+GGG + Chr6:86498906-86498925 MsG0680034373.01.T01:intron 15.0%
!!! ACAATGTTTTAAAAATTTTC+AGG + Chr6:86505070-86505089 MsG0680034373.01.T01:intron 15.0%
!!! ATTAAAGTTTTGTTAATTTC+AGG + Chr6:86499026-86499045 MsG0680034373.01.T01:intron 15.0%
!!! ATTTTTTAAAGTGACAATAA+TGG - Chr6:86498719-86498738 None:intergenic 15.0%
!!! CAATCTAAATATTCTTTTTA+AGG - Chr6:86502442-86502461 None:intergenic 15.0%
!!! GAGTTAACTTTTTTATATTT+AGG + Chr6:86503858-86503877 MsG0680034373.01.T01:intron 15.0%
!!! TAAGAAAATATTCCTTTTTT+AGG + Chr6:86498276-86498295 MsG0680034373.01.T01:intron 15.0%
!!! TTAAAGTTTTGTTAATTTCA+GGG + Chr6:86499027-86499046 MsG0680034373.01.T01:intron 15.0%
!!! TTATAAATTTGAAATCATTG+TGG + Chr6:86507088-86507107 MsG0680034373.01.T01:intron 15.0%
!!! TTATATTACCTTTTTCTTAA+AGG - Chr6:86498893-86498912 None:intergenic 15.0%
!! AAAACGATAAAAAGTTGTAA+AGG + Chr6:86505305-86505324 MsG0680034373.01.T01:intron 20.0%
!! AAAAGTTAACTCTCAATAAT+TGG - Chr6:86503850-86503869 None:intergenic 20.0%
!! AAAATGTTGTAGAAAGTAAA+TGG - Chr6:86504931-86504950 None:intergenic 20.0%
!! AAATACTTTATGTTCTTATC+TGG + Chr6:86507953-86507972 MsG0680034373.01.T01:three_prime_UTR 20.0%
!! AAATGTTGTAGAAAGTAAAT+GGG - Chr6:86504930-86504949 None:intergenic 20.0%
!! AATACTTTATGTTCTTATCT+GGG + Chr6:86507954-86507973 MsG0680034373.01.T01:three_prime_UTR 20.0%
!! AATCAAAAAATCAAAACAGT+AGG - Chr6:86502744-86502763 None:intergenic 20.0%
!! ATGCATATATACATCAAAAT+AGG - Chr6:86498810-86498829 None:intergenic 20.0%
!! ATTACATAGAAAAATGTTTG+AGG - Chr6:86497744-86497763 None:intergenic 20.0%
!! ATTTGTGGAATGAAAAATAT+TGG + Chr6:86503069-86503088 MsG0680034373.01.T01:intron 20.0%
!! CAATATACAGAAATTATGTA+GGG + Chr6:86504886-86504905 MsG0680034373.01.T01:intron 20.0%
!! CACTTCATAGAATAATATAA+AGG - Chr6:86498453-86498472 None:intergenic 20.0%
!! CATCTTTATTATGATCTAAT+AGG - Chr6:86504156-86504175 None:intergenic 20.0%
!! CATTTGTAATGTGTTAAATT+GGG + Chr6:86499767-86499786 MsG0680034373.01.T01:intron 20.0%
!! GTTATTTGTATTGAAAATTG+AGG + Chr6:86499350-86499369 MsG0680034373.01.T01:intron 20.0%
!! TAAGATATTAGAAGAAATTG+CGG - Chr6:86502494-86502513 None:intergenic 20.0%
!! TAATTGGTGTAAGATAAAAA+TGG - Chr6:86503834-86503853 None:intergenic 20.0%
!! TAGATTTCCATAAATTAAAC+AGG - Chr6:86507226-86507245 None:intergenic 20.0%
!! TCACAAATAAGTAAATGAAA+AGG - Chr6:86502101-86502120 None:intergenic 20.0%
!! TCATTTGTAATGTGTTAAAT+TGG + Chr6:86499766-86499785 MsG0680034373.01.T01:intron 20.0%
!! TCTTAAAAATAGGAACTAAT+TGG + Chr6:86498183-86498202 MsG0680034373.01.T01:intron 20.0%
!! TGTTTAGTATTAGATAATAG+TGG - Chr6:86506155-86506174 None:intergenic 20.0%
!! TTAAAATAAAAAATGGGGAA+GGG - Chr6:86498752-86498771 None:intergenic 20.0%
!! TTCAAAAGAAAGTAGTATAA+AGG - Chr6:86502992-86503011 None:intergenic 20.0%
!! TTTATCATTTAAGCTCTATT+TGG + Chr6:86505637-86505656 MsG0680034373.01.T01:intron 20.0%
!!! AGATTTTTTTGGAGTTTAAT+GGG + Chr6:86500045-86500064 MsG0680034373.01.T01:intron 20.0%
!!! ATATAAATTTTTAAGTTCGG+GGG + Chr6:86498907-86498926 MsG0680034373.01.T01:intron 20.0%
!!! ATCTTAAAATATTTCTACTC+AGG - Chr6:86504426-86504445 None:intergenic 20.0%
!!! ATGAAGATAAGCTTTTTAAA+AGG - Chr6:86507037-86507056 None:intergenic 20.0%
!!! ATTAGTTCCTATTTTTAAGA+TGG - Chr6:86498183-86498202 None:intergenic 20.0%
!!! ATTGACGAAACTTAAATTTT+AGG + Chr6:86499054-86499073 MsG0680034373.01.T01:intron 20.0%
!!! ATTTTCCTTTTGAATTTTGA+TGG + Chr6:86504997-86505016 MsG0680034373.01.T01:intron 20.0%
!!! CATTTTCTCATATTTATTAC+CGG - Chr6:86499953-86499972 None:intergenic 20.0%
!!! GGTTTGATTTTATATTCATT+GGG + Chr6:86499788-86499807 MsG0680034373.01.T01:intron 20.0%
!!! GTGTCATTAAAAAAAGAATT+TGG - Chr6:86499113-86499132 None:intergenic 20.0%
!!! TAAAGTTTTGTTAATTTCAG+GGG + Chr6:86499028-86499047 MsG0680034373.01.T01:intron 20.0%
!!! TAGATTTTTTTGGAGTTTAA+TGG + Chr6:86500044-86500063 MsG0680034373.01.T01:intron 20.0%
!!! TATTTTCTTATATTTGAGAC+CGG - Chr6:86498266-86498285 None:intergenic 20.0%
!!! TGAAGATAAGCTTTTTAAAA+GGG - Chr6:86507036-86507055 None:intergenic 20.0%
!!! TTAAAGCTAGCTATTAATTT+TGG - Chr6:86498849-86498868 None:intergenic 20.0%
!!! TTGACGAAACTTAAATTTTA+GGG + Chr6:86499055-86499074 MsG0680034373.01.T01:intron 20.0%
!!! TTTAAAATAAAAAATGGGGA+AGG - Chr6:86498753-86498772 None:intergenic 20.0%
!!! TTTGAAATTTCTCTGTTTTT+TGG - Chr6:86501660-86501679 None:intergenic 20.0%
!!! TTTTGTTTGATTTCGTATAA+GGG + Chr6:86506315-86506334 MsG0680034373.01.T01:intron 20.0%
!!! TTTTTGTTTGATTTCGTATA+AGG + Chr6:86506314-86506333 MsG0680034373.01.T01:intron 20.0%
! AAAGAATAATGCAGTATAGA+GGG - Chr6:86502661-86502680 None:intergenic 25.0%
! AAAGATAGAAAAAGAAACGA+CGG + Chr6:86501489-86501508 MsG0680034373.01.T01:CDS 25.0%
! AAGACACAAATCAATTATAC+TGG - Chr6:86497982-86498001 None:intergenic 25.0%
! AATATATCTTTGAATCCTCT+GGG + Chr6:86500116-86500135 MsG0680034373.01.T01:intron 25.0%
! ACAATTAAATAAGTTCCAAG+AGG - Chr6:86505525-86505544 None:intergenic 25.0%
! ACACAAGTTAACAATAACAT+TGG + Chr6:86501567-86501586 MsG0680034373.01.T01:CDS 25.0%
! ACACTCGATAAAAAAAGAAA+AGG - Chr6:86505373-86505392 None:intergenic 25.0%
! ACCTTAGTTTACAAAAAAAC+AGG + Chr6:86505280-86505299 MsG0680034373.01.T01:intron 25.0%
! AGAAGTTTCATATAATGAGA+AGG + Chr6:86501719-86501738 MsG0680034373.01.T01:CDS 25.0%
! ATAAGTAAATGAAAAGGTAG+AGG - Chr6:86502095-86502114 None:intergenic 25.0%
! ATAATATTGACCAGATACAT+TGG + Chr6:86500351-86500370 MsG0680034373.01.T01:intron 25.0%
! ATACAAAAGTTCAAAGGATA+AGG - Chr6:86505819-86505838 None:intergenic 25.0%
! ATACCAGAACTTACATATAA+TGG - Chr6:86503129-86503148 None:intergenic 25.0%
! ATATCTTTAATCCAAAGTGT+CGG + Chr6:86500002-86500021 MsG0680034373.01.T01:intron 25.0%
! ATGAAACACTAGAAGTAAAA+GGG + Chr6:86505180-86505199 MsG0680034373.01.T01:intron 25.0%
! ATTAACTGGGAATAACTTTA+TGG + Chr6:86504286-86504305 MsG0680034373.01.T01:intron 25.0%
! ATTAGTCAACAATTGTTCAT+GGG + Chr6:86502317-86502336 MsG0680034373.01.T01:intron 25.0%
! ATTGAATTATTTCCATGACA+TGG - Chr6:86500099-86500118 None:intergenic 25.0%
! CAATTAAATAAGTTCCAAGA+GGG - Chr6:86505524-86505543 None:intergenic 25.0%
! CATAGAACAAAAACTAAGTT+AGG - Chr6:86506538-86506557 None:intergenic 25.0%
! CATGATACCATCTTAAAAAT+AGG + Chr6:86498173-86498192 MsG0680034373.01.T01:intron 25.0%
! CCAATATACAGAAATTATGT+AGG + Chr6:86504885-86504904 MsG0680034373.01.T01:intron 25.0%
! CCTACATAATTTCTGTATAT+TGG - Chr6:86504888-86504907 None:intergenic 25.0%
! CGGTAATAAATATGAGAAAA+TGG + Chr6:86499951-86499970 MsG0680034373.01.T01:intron 25.0%
! CTTAAGTAAAAGTCTCAAAA+CGG + Chr6:86504857-86504876 MsG0680034373.01.T01:intron 25.0%
! GAAGAATAAACCTTGAATAA+CGG - Chr6:86499512-86499531 None:intergenic 25.0%
! GATAGTCATAATGATACAAA+AGG + Chr6:86501216-86501235 MsG0680034373.01.T01:CDS 25.0%
! GCTAGAAGAAAATATAGATT+GGG + Chr6:86507718-86507737 MsG0680034373.01.T01:CDS 25.0%
! GTCAATGTATATATCTAATG+TGG + Chr6:86502569-86502588 MsG0680034373.01.T01:intron 25.0%
! TAAAAATAGGAACTAATTGG+AGG + Chr6:86498186-86498205 MsG0680034373.01.T01:intron 25.0%
! TACAAAAGTTCAAAGGATAA+GGG - Chr6:86505818-86505837 None:intergenic 25.0%
! TATATGAACTATTTGGGAAA+TGG + Chr6:86498423-86498442 MsG0680034373.01.T01:intron 25.0%
! TATTCAATGAACCAAAAAAG+TGG + Chr6:86500375-86500394 MsG0680034373.01.T01:intron 25.0%
! TCACACAAAACGTTATAAAA+TGG - Chr6:86503702-86503721 None:intergenic 25.0%
! TCACATGTTACATATAAAGT+TGG + Chr6:86503168-86503187 MsG0680034373.01.T01:CDS 25.0%
! TCACTAACAGAAAAATTTGA+CGG + Chr6:86498982-86499001 MsG0680034373.01.T01:intron 25.0%
! TCAGACTATATGAACTATTT+GGG + Chr6:86498417-86498436 MsG0680034373.01.T01:intron 25.0%
! TGAGAATCATTTGAAGATAA+CGG - Chr6:86501060-86501079 None:intergenic 25.0%
! TGCTAGAAGAAAATATAGAT+TGG + Chr6:86507717-86507736 MsG0680034373.01.T01:CDS 25.0%
! TGTAAAGGATAACACAAAAA+TGG + Chr6:86505320-86505339 MsG0680034373.01.T01:intron 25.0%
! TTCAGTATACAAAAGTTCAA+AGG - Chr6:86505825-86505844 None:intergenic 25.0%
! TTGTAATTGAAACTGCAAAA+AGG - Chr6:86505253-86505272 None:intergenic 25.0%
! TTTAAAAAATTCCACAAGCT+AGG - Chr6:86506716-86506735 None:intergenic 25.0%
! TTTCATAGCCTAAAATATGT+AGG + Chr6:86502343-86502362 MsG0680034373.01.T01:intron 25.0%
!! AAGATTGCCTGTTTAATTTA+TGG + Chr6:86507216-86507235 MsG0680034373.01.T01:intron 25.0%
!! ATTGTTTGCCTTTAAGAAAA+AGG + Chr6:86498882-86498901 MsG0680034373.01.T01:intron 25.0%
!! ATTTGAAATTGGTTCTTCAT+AGG + Chr6:86497407-86497426 MsG0680034373.01.T01:intron 25.0%
!! CTTTGTATCATGTTTTATAC+AGG + Chr6:86498525-86498544 MsG0680034373.01.T01:intron 25.0%
!! TATTTCTCAATTTTCATGAG+AGG + Chr6:86502242-86502261 MsG0680034373.01.T01:intron 25.0%
!! TGACGAAACTTAAATTTTAG+GGG + Chr6:86499056-86499075 MsG0680034373.01.T01:intron 25.0%
!! TTCATATAGTCTGAGATTTA+AGG - Chr6:86498411-86498430 None:intergenic 25.0%
!! TTGTAAATTCATGAAAGTGT+AGG + Chr6:86504707-86504726 MsG0680034373.01.T01:intron 25.0%
!! TTGTTCTTCCTACATATTTT+AGG - Chr6:86502354-86502373 None:intergenic 25.0%
!!! AAAAAGTGGTTTTTTGCTTA+TGG - Chr6:86500408-86500389 None:intergenic 25.0%
!!! AAAGTTTTGTTAATTTCAGG+GGG + Chr6:86499029-86499048 MsG0680034373.01.T01:intron 25.0%
!!! ACCTGTTTTTTTGTAAACTA+AGG - Chr6:86505284-86505303 None:intergenic 25.0%
!!! AGCTATTAATTTTGGAGTTT+GGG - Chr6:86498841-86498860 None:intergenic 25.0%
!!! ATAAGCAAAAAACCACTTTT+TGG + Chr6:86500299-86500318 MsG0680034373.01.T01:intron 25.0%
!!! ATGTAATTTTGTTTGATCAG+AGG + Chr6:86497757-86497776 MsG0680034373.01.T01:intron 25.0%
!!! CTTTTTTATATTTAGGTCAG+AGG + Chr6:86503865-86503884 MsG0680034373.01.T01:intron 25.0%
!!! GGGTTTGATTTTATATTCAT+TGG + Chr6:86499787-86499806 MsG0680034373.01.T01:intron 25.0%
!!! TAAGCAAAAAACCACTTTTT+GGG + Chr6:86500300-86500319 MsG0680034373.01.T01:intron 25.0%
!!! TAAGCAAAAAACCACTTTTT+TGG - Chr6:86500319-86500300 None:intergenic 25.0%
!!! TAGCTATTAATTTTGGAGTT+TGG - Chr6:86498842-86498861 None:intergenic 25.0%
!!! TCAGACTGTTTTTATTTCTT+TGG + Chr6:86506002-86506021 MsG0680034373.01.T01:intron 25.0%
!!! TCTTTTCTTATATTTGAGAC+CGG + Chr6:86498375-86498394 MsG0680034373.01.T01:intron 25.0%
!!! TGGTTTTTTGCTTACAAATT+GGG + Chr6:86500395-86500414 MsG0680034373.01.T01:intron 25.0%
!!! TTATAGATTCTGTTTTTCTG+AGG + Chr6:86499697-86499716 MsG0680034373.01.T01:intron 25.0%
!!! TTTTTAAGATGGTATCATGA+AGG - Chr6:86498172-86498191 None:intergenic 25.0%
!!! TTTTTTTTTTTGCTGACCAA+GGG - Chr6:86504203-86504222 None:intergenic 25.0%
!!! TTTTTTTTTTTTGCTGACCA+AGG - Chr6:86504204-86504223 None:intergenic 25.0%
AAAAACAAAAACCTAGCTTG+TGG + Chr6:86506702-86506721 MsG0680034373.01.T01:intron 30.0%
AAAATACCCTTCATTGTCTT+GGG - Chr6:86502069-86502088 None:intergenic 30.0%
AAACCTGCAAAATAAGTGAA+AGG - Chr6:86502811-86502830 None:intergenic 30.0%
AAATGGTGAAAAAGCTGATT+CGG + Chr6:86507475-86507494 MsG0680034373.01.T01:CDS 30.0%
AACACTTGATATACAATCAG+AGG - Chr6:86497718-86497737 None:intergenic 30.0%
AACCAATGAGCTAAATAAAG+CGG - Chr6:86502929-86502948 None:intergenic 30.0%
AAGATAGAAAAAGAAACGAC+GGG + Chr6:86501490-86501509 MsG0680034373.01.T01:CDS 30.0%
AAGCTACAAAAACAAAACTG+TGG - Chr6:86506803-86506822 None:intergenic 30.0%
AAGGCATAAGATAAAACCAA+AGG - Chr6:86503657-86503676 None:intergenic 30.0%
AAGTTATACTCAAGCATCAA+AGG - Chr6:86504664-86504683 None:intergenic 30.0%
ACACTAATAACAGTGAAACT+TGG - Chr6:86507161-86507180 None:intergenic 30.0%
AGAAAGCAAAGTAAGAACAA+AGG - Chr6:86503439-86503458 None:intergenic 30.0%
AGCAATGTTCATATGCAAAA+AGG - Chr6:86500739-86500758 None:intergenic 30.0%
AGGGATAATAAAATTGTTGC+TGG - Chr6:86499135-86499154 None:intergenic 30.0%
ATATCAGTGACTGAAATGAA+GGG - Chr6:86505615-86505634 None:intergenic 30.0%
ATGTGATAAACTGAATGAAG+AGG - Chr6:86501036-86501055 None:intergenic 30.0%
ATTGGGTAGAACTGTTTAAT+TGG + Chr6:86499805-86499824 MsG0680034373.01.T01:intron 30.0%
CAAAGAATAATGCAGTATAG+AGG - Chr6:86502662-86502681 None:intergenic 30.0%
CAACAAAGTTTGATCTTACT+TGG - Chr6:86503335-86503354 None:intergenic 30.0%
CAATATATCTTTGAATCCTC+TGG + Chr6:86500115-86500134 MsG0680034373.01.T01:intron 30.0%
CAATTAGTAGTGCTTATTTG+TGG + Chr6:86503054-86503073 MsG0680034373.01.T01:intron 30.0%
CACATAAGTGCAAAACTTTA+GGG + Chr6:86498937-86498956 MsG0680034373.01.T01:intron 30.0%
CATGAAACACTAGAAGTAAA+AGG + Chr6:86505179-86505198 MsG0680034373.01.T01:intron 30.0%
CATGCTTTCATGAATTAGTT+TGG + Chr6:86502889-86502908 MsG0680034373.01.T01:intron 30.0%
CATGTATGAAAAGAAGATAG+AGG + Chr6:86505458-86505477 MsG0680034373.01.T01:intron 30.0%
CATTAGCAGTGAGAAAAATT+GGG + Chr6:86506245-86506264 MsG0680034373.01.T01:intron 30.0%
CATTAGTCAACAATTGTTCA+TGG + Chr6:86502316-86502335 MsG0680034373.01.T01:intron 30.0%
CATTGAATAACCAATGTATC+TGG - Chr6:86500364-86500383 None:intergenic 30.0%
CTAAACTAACCTATCCAAAT+TGG - Chr6:86500216-86500235 None:intergenic 30.0%
CTACTCAATGAACCTAAAAA+AGG - Chr6:86498291-86498310 None:intergenic 30.0%
CTCAGACTATATGAACTATT+TGG + Chr6:86498416-86498435 MsG0680034373.01.T01:intron 30.0%
CTGAAAACAGAAATTCTAAG+AGG - Chr6:86497636-86497655 None:intergenic 30.0%
GAAAAAAATGACTAGAGCTT+AGG - Chr6:86506436-86506455 None:intergenic 30.0%
GAGAAACAAAGTCACAATTA+AGG - Chr6:86498614-86498633 None:intergenic 30.0%
GATAAAAACAAAGAGAGAGA+AGG - Chr6:86498009-86498028 None:intergenic 30.0%
GGTATGTTTAAGAAGATTCT+TGG + Chr6:86506972-86506991 MsG0680034373.01.T01:intron 30.0%
GTTATCTTCAAATGATTCTC+AGG + Chr6:86501059-86501078 MsG0680034373.01.T01:CDS 30.0%
GTTCTTACTTTGCTTTCTTT+CGG + Chr6:86503441-86503460 MsG0680034373.01.T01:intron 30.0%
TAACATTTATTGTGTCCAAG+TGG + Chr6:86504254-86504273 MsG0680034373.01.T01:intron 30.0%
TAATAGGACATACAATCTTG+CGG - Chr6:86504140-86504159 None:intergenic 30.0%
TAGATTGGGAAGATATTCTA+TGG + Chr6:86507732-86507751 MsG0680034373.01.T01:CDS 30.0%
TAGGGAACAATAAAAAGCTT+TGG + Chr6:86504904-86504923 MsG0680034373.01.T01:intron 30.0%
TATTCAATGAACCCAAAAAG+TGG - Chr6:86500314-86500333 None:intergenic 30.0%
TATTTCCATGTGACATATGT+CGG - Chr6:86501359-86501378 None:intergenic 30.0%
TCATATAATGAGAAGGAAGT+TGG + Chr6:86501726-86501745 MsG0680034373.01.T01:CDS 30.0%
TCATTAGCAGTGAGAAAAAT+TGG + Chr6:86506244-86506263 MsG0680034373.01.T01:intron 30.0%
TCTCTCCATCAAAATTCAAA+AGG - Chr6:86505005-86505024 None:intergenic 30.0%
TCTTTCACACCTCTATATAA+AGG + Chr6:86497517-86497536 MsG0680034373.01.T01:intron 30.0%
TGATAACAGGATAGAATCAA+GGG + Chr6:86501101-86501120 MsG0680034373.01.T01:CDS 30.0%
TGCATAAACAAACACAACAA+AGG - Chr6:86500711-86500730 None:intergenic 30.0%
TGTCCATTATATGTAAGTTC+TGG + Chr6:86503123-86503142 MsG0680034373.01.T01:intron 30.0%
TGTTGTGTTTGTTTATGCAA+TGG + Chr6:86500712-86500731 MsG0680034373.01.T01:intron 30.0%
TGTTTGCTTAAGAGAAGTTT+GGG + Chr6:86503522-86503541 MsG0680034373.01.T01:intron 30.0%
TTAAGATTTGCATTCATGCA+AGG - Chr6:86503676-86503695 None:intergenic 30.0%
TTCAAAATATCTCTGTGACT+TGG + Chr6:86500251-86500270 MsG0680034373.01.T01:intron 30.0%
TTCACATTGCATCATATTAG+AGG + Chr6:86498224-86498243 MsG0680034373.01.T01:intron 30.0%
TTGAGCTACTGAACAAAATA+TGG - Chr6:86502846-86502865 None:intergenic 30.0%
TTGGGTAGAACTGTTTAATT+GGG + Chr6:86499806-86499825 MsG0680034373.01.T01:intron 30.0%
TTGTGAAGGTAGAGTAAAAA+AGG + Chr6:86505781-86505800 MsG0680034373.01.T01:intron 30.0%
TTGTTTGCTTAAGAGAAGTT+TGG + Chr6:86503521-86503540 MsG0680034373.01.T01:intron 30.0%
TTTATCGAGTGTTATCAATG+AGG + Chr6:86505381-86505400 MsG0680034373.01.T01:intron 30.0%
TTTGCATATGAACATTGCTT+TGG + Chr6:86500740-86500759 MsG0680034373.01.T01:intron 30.0%
! AAATCAAAGCATCAAAGAAG+AGG - Chr6:86502718-86502737 None:intergenic 30.0%
! AAATTATGATAGTGTGTGTG+TGG + Chr6:86499867-86499886 MsG0680034373.01.T01:intron 30.0%
! AACGTTTTGTGTGATTATCA+TGG + Chr6:86503708-86503727 MsG0680034373.01.T01:intron 30.0%
! AATGGGAATGGATTTGAAAT+TGG + Chr6:86497396-86497415 MsG0680034373.01.T01:intron 30.0%
! AGTGGTCTTAAAGTATTAAC+TGG + Chr6:86504272-86504291 MsG0680034373.01.T01:intron 30.0%
! CTCTATCTTCTTTTCATACA+TGG - Chr6:86505460-86505479 None:intergenic 30.0%
! CTCTTAGAATTTCTGTTTTC+AGG + Chr6:86497634-86497653 MsG0680034373.01.T01:intron 30.0%
! GAGGTACTTGTATCATAAAA+AGG + Chr6:86505477-86505496 MsG0680034373.01.T01:intron 30.0%
! GATTTTCAGAAATCTAGTCT+TGG + Chr6:86505092-86505111 MsG0680034373.01.T01:intron 30.0%
! GTGGTCTTAAAGTATTAACT+GGG + Chr6:86504273-86504292 MsG0680034373.01.T01:intron 30.0%
! TACTCAACATATTTCTACTC+AGG - Chr6:86504498-86504517 None:intergenic 30.0%
! TATGTAAGTTCTGGTATTTC+AGG + Chr6:86503132-86503151 MsG0680034373.01.T01:intron 30.0%
!! AATGGATTAGTGCATTTCAA+GGG + Chr6:86507817-86507836 MsG0680034373.01.T01:exon 30.0%
!! ACTTGGTGTTTGAACTTTAT+AGG + Chr6:86505409-86505428 MsG0680034373.01.T01:intron 30.0%
!! ATCTTGTTATTGTCTTGTGA+AGG + Chr6:86498577-86498596 MsG0680034373.01.T01:intron 30.0%
!! ATTTGATGATGACTATGTTG+AGG + Chr6:86500637-86500656 MsG0680034373.01.T01:intron 30.0%
!! GATTGATGGTTTTACATTGT+CGG - Chr6:86500077-86500096 None:intergenic 30.0%
!! GTTAATACTTTAAGACCACT+TGG - Chr6:86504272-86504291 None:intergenic 30.0%
!! GTTTTATTACAGAAAGCATG+CGG + Chr6:86503945-86503964 MsG0680034373.01.T01:intron 30.0%
!! TGTGCTTGTTGGAATTTTTA+AGG + Chr6:86506281-86506300 MsG0680034373.01.T01:intron 30.0%
!! TTTGAAGCTATGTTCTGTTT+TGG + Chr6:86506738-86506757 MsG0680034373.01.T01:intron 30.0%
!! TTTTTGCTTATGGTAGTGAT+TGG - Chr6:86500290-86500309 None:intergenic 30.0%
!!! CATTTTTAGTGAAATCTCCT+TGG + Chr6:86497914-86497933 MsG0680034373.01.T01:intron 30.0%
!!! CGTCGTATTATTTAGTTTTG+AGG + Chr6:86500837-86500856 MsG0680034373.01.T01:CDS 30.0%
!!! GTGGTTTTTTGCTTACAAAT+TGG + Chr6:86500394-86500413 MsG0680034373.01.T01:intron 30.0%
!!! TTCAGTAGCTCAAAGTTTTT+TGG + Chr6:86502853-86502872 MsG0680034373.01.T01:intron 30.0%
!!! TTCTTTGGTTTTCAGAAAAG+TGG + Chr6:86506017-86506036 MsG0680034373.01.T01:intron 30.0%
AAAACCATCAATCCATGTCA+TGG + Chr6:86500084-86500103 MsG0680034373.01.T01:intron 35.0%
AAAAGAAAAGGACCTGAAAG+CGG - Chr6:86505361-86505380 None:intergenic 35.0%
AAAAGATATGGTGATTCTCC+TGG + Chr6:86501318-86501337 MsG0680034373.01.T01:CDS 35.0%
AAACACAAAGATGTTGACAG+CGG + Chr6:86501801-86501820 MsG0680034373.01.T01:CDS 35.0%
AAAGACTCGAAAGATTTCAG+GGG + Chr6:86501294-86501313 MsG0680034373.01.T01:CDS 35.0%
AAAGGAATATGCCCTTTCAA+GGG + Chr6:86507781-86507800 MsG0680034373.01.T01:CDS 35.0%
AAAGGAGTGAGTAGATTTGA+AGG - Chr6:86502974-86502993 None:intergenic 35.0%
AAAGGATAAGGGATTTCACA+AGG - Chr6:86505807-86505826 None:intergenic 35.0%
AAGGTGAGAAAAACACAAGA+GGG - Chr6:86498153-86498172 None:intergenic 35.0%
ACAGTGAAACTTGGATCAAA+TGG - Chr6:86507152-86507171 None:intergenic 35.0%
ACTTCTTTGCTTTGGTCAAT+TGG + Chr6:86500497-86500516 MsG0680034373.01.T01:intron 35.0%
AGAATTGAACATGAGACCTT+GGG - Chr6:86500185-86500204 None:intergenic 35.0%
AGATCAAGAAGCAGAAAAGT+TGG + Chr6:86501614-86501633 MsG0680034373.01.T01:CDS 35.0%
AGGTGATATTAAGACAGAGA+AGG + Chr6:86501236-86501255 MsG0680034373.01.T01:CDS 35.0%
ATAGGAACTAATTGGAGGTT+TGG + Chr6:86498191-86498210 MsG0680034373.01.T01:intron 35.0%
ATCCAATTGGAACTGATAAC+AGG + Chr6:86501088-86501107 MsG0680034373.01.T01:CDS 35.0%
ATCCTGTTATCAGTTCCAAT+TGG - Chr6:86501093-86501112 None:intergenic 35.0%
ATGAAGAGGGAATCAATGAA+TGG + Chr6:86501687-86501706 MsG0680034373.01.T01:CDS 35.0%
ATGCAGAAAGAAAACAGTGT+TGG + Chr6:86507847-86507866 MsG0680034373.01.T01:three_prime_UTR 35.0%
ATTTCCATGTGACATATGTC+GGG - Chr6:86501358-86501377 None:intergenic 35.0%
CAACTATGTTCCTTCACAAT+GGG + Chr6:86497379-86497398 MsG0680034373.01.T01:intron 35.0%
CAATAGCTGATGTGTAAGTA+TGG - Chr6:86506067-86506086 None:intergenic 35.0%
CACCTATTCTGAACATTACA+AGG - Chr6:86502381-86502400 None:intergenic 35.0%
CATATCAGGCAAAAGATCAT+TGG + Chr6:86497438-86497457 MsG0680034373.01.T01:intron 35.0%
CATATCAGTGACTGAAATGA+AGG - Chr6:86505616-86505635 None:intergenic 35.0%
CTAAAAAGGATCCATGATGT+CGG + Chr6:86507243-86507262 MsG0680034373.01.T01:intron 35.0%
CTAACAGAAAAATTTGACGG+AGG + Chr6:86498985-86499004 MsG0680034373.01.T01:intron 35.0%
CTACTCTAGATGCTTGTATT+GGG + Chr6:86505874-86505893 MsG0680034373.01.T01:intron 35.0%
CTATGAATCAGAATACATCG+CGG + Chr6:86506553-86506572 MsG0680034373.01.T01:intron 35.0%
CTGATAACAGGATAGAATCA+AGG + Chr6:86501100-86501119 MsG0680034373.01.T01:CDS 35.0%
GAAAATACCCTTCATTGTCT+TGG - Chr6:86502070-86502089 None:intergenic 35.0%
GAAAGACTCGAAAGATTTCA+GGG + Chr6:86501293-86501312 MsG0680034373.01.T01:CDS 35.0%
GAAGACTTAGAGTTTGGTAA+TGG + Chr6:86497543-86497562 MsG0680034373.01.T01:intron 35.0%
GACCTTGTAATGTTCAGAAT+AGG + Chr6:86502376-86502395 MsG0680034373.01.T01:intron 35.0%
GATACTATACTTGATCCTGA+TGG - Chr6:86506858-86506877 None:intergenic 35.0%
GATGCTGAACATTACAACTA+TGG - Chr6:86501977-86501996 None:intergenic 35.0%
GATTTCAGGGGAAAAAGATA+TGG + Chr6:86501306-86501325 MsG0680034373.01.T01:CDS 35.0%
GCACATAAGTGCAAAACTTT+AGG + Chr6:86498936-86498955 MsG0680034373.01.T01:intron 35.0%
GTCTTCACTCCTTTATATAG+AGG - Chr6:86497529-86497548 None:intergenic 35.0%
GTTCATTTGCAATCAAAAGC+TGG - Chr6:86503971-86503990 None:intergenic 35.0%
TCACAATTGACGTATTTCGT+TGG + Chr6:86507504-86507523 MsG0680034373.01.T01:CDS 35.0%
TCTACTCTAGATGCTTGTAT+TGG + Chr6:86505873-86505892 MsG0680034373.01.T01:intron 35.0%
TCTCTTCCATCAACATATTC+TGG - Chr6:86504812-86504831 None:intergenic 35.0%
TCTTTGTGTTTCTTCTGTTC+TGG - Chr6:86501792-86501811 None:intergenic 35.0%
TGAATGCAGAACAATTTCAG+CGG - Chr6:86497609-86497628 None:intergenic 35.0%
TGATTGCAAATGAACAGTGT+TGG + Chr6:86503976-86503995 MsG0680034373.01.T01:intron 35.0%
TGCAGAAAGAAAACAGTGTT+GGG + Chr6:86507848-86507867 MsG0680034373.01.T01:three_prime_UTR 35.0%
TTATCAATGAGGTTGAGACT+TGG + Chr6:86505392-86505411 MsG0680034373.01.T01:intron 35.0%
TTCGAGTCTTTCCAATTCAA+GGG - Chr6:86501285-86501304 None:intergenic 35.0%
TTCTGCTTCTTGATCTTCTT+TGG - Chr6:86501610-86501629 None:intergenic 35.0%
TTGCTGACAAAGGACTAAAA+AGG + Chr6:86506885-86506904 MsG0680034373.01.T01:CDS 35.0%
! AAAATATCTCTGTGACTTGG+CGG + Chr6:86500254-86500273 MsG0680034373.01.T01:intron 35.0%
! AAAGCTGAAAGCTCTAATGA+TGG + Chr6:86503258-86503277 MsG0680034373.01.T01:CDS 35.0%
! ATTTCCATGACATGGATTGA+TGG - Chr6:86500091-86500110 None:intergenic 35.0%
! CAATGATCTTTTGCCTGATA+TGG - Chr6:86497440-86497459 None:intergenic 35.0%
! GTCATTTGGTGAAGATTTGA+AGG + Chr6:86497228-86497247 MsG0680034373.01.T01:CDS 35.0%
! GTTGCTTTCATTAGTTTCGA+TGG + Chr6:86500924-86500943 MsG0680034373.01.T01:CDS 35.0%
! TAGATAAGTGCCTTCGTTTT+TGG + Chr6:86503363-86503382 MsG0680034373.01.T01:intron 35.0%
! TATGTCTCTTTGTTTCCTTG+AGG - Chr6:86504603-86504622 None:intergenic 35.0%
! TCAGATTTAAAGCGCTTATC+AGG - Chr6:86501894-86501913 None:intergenic 35.0%
! TTCAAAAGAGCACATGAAGA+GGG + Chr6:86501674-86501693 MsG0680034373.01.T01:CDS 35.0%
! TTCTTATATTTGAGACCGGA+GGG + Chr6:86498379-86498398 MsG0680034373.01.T01:intron 35.0%
! TTCTTATATTTGAGACCGGA+GGG - Chr6:86498398-86498379 None:intergenic 35.0%
! TTGTTATTGTCTTGTGAAGG+TGG + Chr6:86498580-86498599 MsG0680034373.01.T01:intron 35.0%
! TTTCAAAAGAGCACATGAAG+AGG + Chr6:86501673-86501692 MsG0680034373.01.T01:CDS 35.0%
! TTTCGAGTCTTTCCAATTCA+AGG - Chr6:86501286-86501305 None:intergenic 35.0%
! TTTCTTATATTTGAGACCGG+AGG + Chr6:86498378-86498397 MsG0680034373.01.T01:intron 35.0%
! TTTCTTATATTTGAGACCGG+AGG - Chr6:86498397-86498378 None:intergenic 35.0%
! TTTTTACTGCTTTCTGTTGC+TGG + Chr6:86503408-86503427 MsG0680034373.01.T01:intron 35.0%
!! ACATGAAATTAGTACTGACG+TGG + Chr6:86504009-86504028 MsG0680034373.01.T01:intron 35.0%
!! AGATAAGTGCCTTCGTTTTT+GGG + Chr6:86503364-86503383 MsG0680034373.01.T01:intron 35.0%
!! ATGGATTAGTGCATTTCAAG+GGG + Chr6:86507818-86507837 MsG0680034373.01.T01:exon 35.0%
!! CAATGGATTAGTGCATTTCA+AGG + Chr6:86507816-86507835 MsG0680034373.01.T01:exon 35.0%
!! GAATTTTGATGGAGAGAAGA+TGG + Chr6:86505008-86505027 MsG0680034373.01.T01:intron 35.0%
!! GCTTGTTGGAATTTTTAAGG+TGG + Chr6:86506284-86506303 MsG0680034373.01.T01:intron 35.0%
!! TTGATGGTGAAACTAGAGAT+AGG + Chr6:86501832-86501851 MsG0680034373.01.T01:CDS 35.0%
!!! ATCAGCTTTTTCACCATTTG+TGG - Chr6:86507474-86507493 None:intergenic 35.0%
!!! ATTTTTCAAGACCGACATCA+TGG - Chr6:86507257-86507276 None:intergenic 35.0%
!!! CACTTATTTTGCAGGTTTCA+AGG + Chr6:86502813-86502832 MsG0680034373.01.T01:intron 35.0%
!!! CTTCCTTTCACTTATTTTGC+AGG + Chr6:86502805-86502824 MsG0680034373.01.T01:intron 35.0%
!!! GGTGGCTAGATAGATTTTTT+TGG + Chr6:86500034-86500053 MsG0680034373.01.T01:intron 35.0%
!!! GTCTACTTTTTTGCGAGTTA+AGG + Chr6:86502272-86502291 MsG0680034373.01.T01:intron 35.0%
!!! GTTGTAGTTTTAGAGTTGAG+CGG + Chr6:86505751-86505770 MsG0680034373.01.T01:CDS 35.0%
!!! TTTGGTTTTCAGAAAAGTGG+TGG + Chr6:86506020-86506039 MsG0680034373.01.T01:intron 35.0%
AAATGCGAATGCGAATGCAT+TGG - Chr6:86499634-86499653 None:intergenic 40.0%
AACACAAAGATGTTGACAGC+GGG + Chr6:86501802-86501821 MsG0680034373.01.T01:CDS 40.0%
AACAGAAATGGGAACCTCAT+AGG - Chr6:86505216-86505235 None:intergenic 40.0%
AACCTATCCAAATTGGCACT+AGG - Chr6:86500209-86500228 None:intergenic 40.0%
AACGAGAGAGAATGCATTTC+AGG + Chr6:86505036-86505055 MsG0680034373.01.T01:intron 40.0%
AAGACAGAGAAGGTCACATT+TGG + Chr6:86501246-86501265 MsG0680034373.01.T01:CDS 40.0%
AATACAGCCTCTATAGCTAC+AGG - Chr6:86507993-86508012 None:intergenic 40.0%
AATACCTCTACATGTTCGAG+AGG - Chr6:86507587-86507606 None:intergenic 40.0%
AATGCAATGCAACGGTCATT+TGG + Chr6:86497214-86497233 MsG0680034373.01.T01:CDS 40.0%
AATTCTCCCTAGTGCCAATT+TGG + Chr6:86500199-86500218 MsG0680034373.01.T01:intron 40.0%
ACACTGATACATGTAGACAC+CGG + Chr6:86499931-86499950 MsG0680034373.01.T01:intron 40.0%
ACAGAAAAATTTGACGGAGG+TGG + Chr6:86498988-86499007 MsG0680034373.01.T01:intron 40.0%
ACATGAAATGCACCCTTGAA+AGG - Chr6:86507796-86507815 None:intergenic 40.0%
ACCTATCCAAATTGGCACTA+GGG - Chr6:86500208-86500227 None:intergenic 40.0%
ACCTCACATGCTATGAATTG+TGG + Chr6:86504551-86504570 MsG0680034373.01.T01:intron 40.0%
ACGAGGTTGCAATGAAAAGA+TGG - Chr6:86505854-86505873 None:intergenic 40.0%
ACGATACATCAGACTTCAAG+AGG - Chr6:86507308-86507327 None:intergenic 40.0%
ACTGACAAGCAAGGGTTATT+TGG + Chr6:86500813-86500832 MsG0680034373.01.T01:CDS 40.0%
AGAAGCAGAAAAGTTGGAGA+AGG + Chr6:86501620-86501639 MsG0680034373.01.T01:CDS 40.0%
AGAATCCAACCGCAAAAGAT+AGG + Chr6:86501400-86501419 MsG0680034373.01.T01:CDS 40.0%
AGAGAAGGTCACATTTGGTT+TGG + Chr6:86501251-86501270 MsG0680034373.01.T01:CDS 40.0%
AGCAGTGAGAAAAATTGGGT+TGG + Chr6:86506249-86506268 MsG0680034373.01.T01:intron 40.0%
AGGAGTGAAGACTTAGAGTT+TGG + Chr6:86497537-86497556 MsG0680034373.01.T01:intron 40.0%
AGGTGAGAAAAACACAAGAG+GGG - Chr6:86498152-86498171 None:intergenic 40.0%
AGTTCAGAACTAAGATGCAG+CGG - Chr6:86498031-86498050 None:intergenic 40.0%
AGTTTGGGCATCACATAAAC+AGG - Chr6:86506223-86506242 None:intergenic 40.0%
ATAAACCTTGAATAACGGCG+AGG - Chr6:86499507-86499526 None:intergenic 40.0%
ATACAGCCTCTATAGCTACA+GGG - Chr6:86507992-86508011 None:intergenic 40.0%
ATCAGCATTGTTGCTGACAA+AGG + Chr6:86506875-86506894 MsG0680034373.01.T01:CDS 40.0%
ATGACTATCCCTTTCATGTC+TGG - Chr6:86501205-86501224 None:intergenic 40.0%
ATGGTCCCACTCTTGAAATT+CGG + Chr6:86503277-86503296 MsG0680034373.01.T01:CDS 40.0%
ATGGTGAAACTAGAGATAGG+AGG + Chr6:86501835-86501854 MsG0680034373.01.T01:CDS 40.0%
ATGTTCCTTCACAATGGGAA+TGG + Chr6:86497384-86497403 MsG0680034373.01.T01:intron 40.0%
ATGTTTCTTATTCCCCCTCT+TGG + Chr6:86506767-86506786 MsG0680034373.01.T01:intron 40.0%
CAAATCCATTCCCATTGTGA+AGG - Chr6:86497392-86497411 None:intergenic 40.0%
CAACTAAAAGCTGCATACCA+GGG - Chr6:86506630-86506649 None:intergenic 40.0%
CAGTAACTGCAAACCAAGAA+TGG - Chr6:86500797-86500816 None:intergenic 40.0%
CATAGGACATCAACCATATC+AGG + Chr6:86497424-86497443 MsG0680034373.01.T01:intron 40.0%
CATCACATGCATACCACAAA+TGG + Chr6:86507458-86507477 MsG0680034373.01.T01:CDS 40.0%
CATGAAATGCACCCTTGAAA+GGG - Chr6:86507795-86507814 None:intergenic 40.0%
CTAAAACAAGCCAAGAACCT+TGG - Chr6:86498487-86498506 None:intergenic 40.0%
CTAGAAATTGTGCAGAGTGA+AGG - Chr6:86499554-86499573 None:intergenic 40.0%
CTAGAGATAGGAGGAAAGAA+CGG + Chr6:86501844-86501863 MsG0680034373.01.T01:CDS 40.0%
CTCACTGCTAATGACAGTTT+GGG - Chr6:86506238-86506257 None:intergenic 40.0%
CTTCACTCTGCACAATTTCT+AGG + Chr6:86499552-86499571 MsG0680034373.01.T01:intron 40.0%
GAAAGGAATATGCCCTTTCA+AGG + Chr6:86507780-86507799 MsG0680034373.01.T01:CDS 40.0%
GAACATCTGTGTACAAAGAC+AGG - Chr6:86505929-86505948 None:intergenic 40.0%
GAACGGGACAATGATTTAGA+AGG + Chr6:86501861-86501880 MsG0680034373.01.T01:CDS 40.0%
GAAGCTATACTCAAGCATCA+AGG - Chr6:86504744-86504763 None:intergenic 40.0%
GAAGGTGAGAAAAACACAAG+AGG - Chr6:86498154-86498173 None:intergenic 40.0%
GAATCCAACCGCAAAAGATA+GGG + Chr6:86501401-86501420 MsG0680034373.01.T01:CDS 40.0%
GACTTTCCTATATCTGTGTC+AGG - Chr6:86507431-86507450 None:intergenic 40.0%
GAGAATTGAACATGAGACCT+TGG - Chr6:86500186-86500205 None:intergenic 40.0%
GAGGCTGTATTGAAATTCTC+AGG + Chr6:86508002-86508021 MsG0680034373.01.T01:three_prime_UTR 40.0%
GAGGGAATCAATGAATGGAA+TGG + Chr6:86501692-86501711 MsG0680034373.01.T01:CDS 40.0%
GATAGAATCAAGGGATCTGA+AGG + Chr6:86501110-86501129 MsG0680034373.01.T01:CDS 40.0%
GATATTCTATGGTCTCAAGC+TGG + Chr6:86507743-86507762 MsG0680034373.01.T01:CDS 40.0%
GCAACTATGTTCCTTCACAA+TGG + Chr6:86497378-86497397 MsG0680034373.01.T01:intron 40.0%
GCATCTACATCAAGATTCAG+AGG + Chr6:86500891-86500910 MsG0680034373.01.T01:CDS 40.0%
GCTGTTGAACTTCTTTGCTT+TGG + Chr6:86500489-86500508 MsG0680034373.01.T01:intron 40.0%
GGAAAGACTCGAAAGATTTC+AGG + Chr6:86501292-86501311 MsG0680034373.01.T01:CDS 40.0%
GGAAATACACCAACAGAAGT+CGG + Chr6:86501372-86501391 MsG0680034373.01.T01:CDS 40.0%
GGAGAAAAATGTGTGCTTGT+TGG + Chr6:86506270-86506289 MsG0680034373.01.T01:intron 40.0%
GGTATCCGAATTTCAAGAGT+GGG - Chr6:86503285-86503304 None:intergenic 40.0%
GGTTCTGTTTGTGCTAGATT+TGG - Chr6:86506517-86506536 None:intergenic 40.0%
GTAATGTTCAGCATCGTAAG+AGG + Chr6:86501982-86502001 MsG0680034373.01.T01:CDS 40.0%
GTGTCTACATGTATCAGTGT+CGG - Chr6:86499931-86499950 None:intergenic 40.0%
GTTTGGGAATTTCAGTTCAG+TGG + Chr6:86503538-86503557 MsG0680034373.01.T01:intron 40.0%
TAAGCCTGGTAAACTCAAAG+TGG + Chr6:86498657-86498676 MsG0680034373.01.T01:CDS 40.0%
TAGAGATAGGAGGAAAGAAC+GGG + Chr6:86501845-86501864 MsG0680034373.01.T01:CDS 40.0%
TATCTTTGAATCCTCTGGGT+TGG + Chr6:86500120-86500139 MsG0680034373.01.T01:intron 40.0%
TATGACTCAGATCTTGTTGC+TGG + Chr6:86503919-86503938 MsG0680034373.01.T01:CDS 40.0%
TATTCCCCCTCTTGGATAAA+GGG + Chr6:86506775-86506794 MsG0680034373.01.T01:intron 40.0%
TATTTCCACATTCTGCCCAA+AGG - Chr6:86503758-86503777 None:intergenic 40.0%
TCCAAAACGAGCTTCAAGAT+TGG - Chr6:86502039-86502058 None:intergenic 40.0%
TCCTTGAGGTTCAACTACTT+GGG - Chr6:86504589-86504608 None:intergenic 40.0%
TCGAGTCTTTCCAATTCAAG+GGG - Chr6:86501284-86501303 None:intergenic 40.0%
TCTATCAACAGGATGCTTCA+AGG - Chr6:86502687-86502706 None:intergenic 40.0%
TCTCACTGCTAATGACAGTT+TGG - Chr6:86506239-86506258 None:intergenic 40.0%
TCTGCGTCTTCTTTCACTAA+TGG + Chr6:86507115-86507134 MsG0680034373.01.T01:intron 40.0%
TGAGAATCTTGTACACTCTC+TGG - Chr6:86500422-86500441 None:intergenic 40.0%
TGGTATCCGAATTTCAAGAG+TGG - Chr6:86503286-86503305 None:intergenic 40.0%
TGGTGAAGATTTGAAGGCTT+TGG + Chr6:86497234-86497253 MsG0680034373.01.T01:CDS 40.0%
TGTAGGCCAGAATATGTTGA+TGG + Chr6:86504803-86504822 MsG0680034373.01.T01:intron 40.0%
TTACTTTGTATTCGGGTGAC+TGG + Chr6:86504956-86504975 MsG0680034373.01.T01:intron 40.0%
TTATTCCCCCTCTTGGATAA+AGG + Chr6:86506774-86506793 MsG0680034373.01.T01:intron 40.0%
TTCAGTTCAGTGGCTTATGA+TGG + Chr6:86503548-86503567 MsG0680034373.01.T01:intron 40.0%
TTCCTTGAGGTTCAACTACT+TGG - Chr6:86504590-86504609 None:intergenic 40.0%
TTGAAGAAGTCTCTCCAACT+CGG - Chr6:86500870-86500889 None:intergenic 40.0%
TTGCAGTTACTGACAAGCAA+GGG + Chr6:86500805-86500824 MsG0680034373.01.T01:intron 40.0%
TTGTGAAGGAACATAGTTGC+AGG - Chr6:86497378-86497397 None:intergenic 40.0%
TTTGCAGTTACTGACAAGCA+AGG + Chr6:86500804-86500823 MsG0680034373.01.T01:intron 40.0%
! AAATCTCCTTGGAAGTGCAA+GGG + Chr6:86497925-86497944 MsG0680034373.01.T01:intron 40.0%
! AACGACTCTTTTTGATGTGC+TGG + Chr6:86497479-86497498 MsG0680034373.01.T01:intron 40.0%
! AAGGGTGCATTTCATGTCAA+TGG + Chr6:86507799-86507818 MsG0680034373.01.T01:CDS 40.0%
! ACTTTGAGTTTACCAGGCTT+AGG - Chr6:86498658-86498677 None:intergenic 40.0%
! AGAACTGATCAAGTTGTGGA+AGG + Chr6:86503203-86503222 MsG0680034373.01.T01:CDS 40.0%
! AGATATGAGCTCTGTTTTGC+TGG + Chr6:86507368-86507387 MsG0680034373.01.T01:intron 40.0%
! AGGAATCGACTTCTATCAAC+AGG - Chr6:86502698-86502717 None:intergenic 40.0%
! ATTGACTCTTCCCTTCCTTT+GGG + Chr6:86503740-86503759 MsG0680034373.01.T01:intron 40.0%
! CAAAGAGTCCCTATCTTTTG+CGG - Chr6:86501412-86501431 None:intergenic 40.0%
! CTGATCAGTGTTTTCAGCTT+AGG + Chr6:86498080-86498099 MsG0680034373.01.T01:intron 40.0%
! CTGTTTTGCTGGAGAGAAAA+TGG + Chr6:86507379-86507398 MsG0680034373.01.T01:CDS 40.0%
! GAACAATTTCAGCGGAGTTT+TGG - Chr6:86497601-86497620 None:intergenic 40.0%
! GACATGCACATCACTCATTT+TGG - Chr6:86506998-86507017 None:intergenic 40.0%
! GCGAGTTAAGGCATTTCATA+GGG + Chr6:86502284-86502303 MsG0680034373.01.T01:intron 40.0%
! TACTGACGTGGCAATTTTGT+TGG + Chr6:86504021-86504040 MsG0680034373.01.T01:intron 40.0%
! TCGCTATTCTGTTTCTTCCA+TGG + Chr6:86507281-86507300 MsG0680034373.01.T01:intron 40.0%
! TCTGGTATTTCAGGTAAAGC+AGG + Chr6:86503141-86503160 MsG0680034373.01.T01:intron 40.0%
! TCTTTTGAATGTCCCGTGTT+GGG + Chr6:86503003-86503022 MsG0680034373.01.T01:intron 40.0%
! TGCGAGTTAAGGCATTTCAT+AGG + Chr6:86502283-86502302 MsG0680034373.01.T01:intron 40.0%
! TGCTAGAACTGATCAAGTTG+TGG + Chr6:86503199-86503218 MsG0680034373.01.T01:CDS 40.0%
! TGCTTATGGTAGTGATTGGA+GGG - Chr6:86500286-86500305 None:intergenic 40.0%
! TTCTTTTGAATGTCCCGTGT+TGG + Chr6:86503002-86503021 MsG0680034373.01.T01:intron 40.0%
! TTGCTTATGGTAGTGATTGG+AGG - Chr6:86500287-86500306 None:intergenic 40.0%
! TTTGAGGTTTATGACCGAGT+TGG + Chr6:86500853-86500872 MsG0680034373.01.T01:CDS 40.0%
!! AATGAGAAGGAAGTTGGTGA+TGG + Chr6:86501732-86501751 MsG0680034373.01.T01:CDS 40.0%
!! CACCGCTTTATTTAGCTCAT+TGG + Chr6:86502924-86502943 MsG0680034373.01.T01:intron 40.0%
!! GATAAGTGCCTTCGTTTTTG+GGG + Chr6:86503365-86503384 MsG0680034373.01.T01:intron 40.0%
!! TATTGACTCTTCCCTTCCTT+TGG + Chr6:86503739-86503758 MsG0680034373.01.T01:intron 40.0%
!! TGGATTAGTGCATTTCAAGG+GGG + Chr6:86507819-86507838 MsG0680034373.01.T01:exon 40.0%
!! TGTTGATTCTGTGCAATGTC+AGG + Chr6:86505672-86505691 MsG0680034373.01.T01:intron 40.0%
AAAAGGACCTGAAAGCGGTT+CGG - Chr6:86505356-86505375 None:intergenic 45.0%
AAGAGTTGCGCACATGCATT+AGG + Chr6:86504105-86504124 MsG0680034373.01.T01:CDS 45.0%
AAGCGAGCAGATGTATAGAG+TGG - Chr6:86506911-86506930 None:intergenic 45.0%
ACATCAAGATTGGGGAGACA+AGG + Chr6:86501515-86501534 MsG0680034373.01.T01:CDS 45.0%
ACATCTGCTCGCTTGAAGAA+GGG + Chr6:86506917-86506936 MsG0680034373.01.T01:CDS 45.0%
ACCCAAGTAGTTGAACCTCA+AGG + Chr6:86504585-86504604 MsG0680034373.01.T01:intron 45.0%
ACGACGGGAAACATCAAGAT+TGG + Chr6:86501505-86501524 MsG0680034373.01.T01:CDS 45.0%
AGACTGGGAATGCAATGCAA+CGG + Chr6:86497206-86497225 MsG0680034373.01.T01:CDS 45.0%
AGAGTTGCGCACATGCATTA+GGG + Chr6:86504106-86504125 MsG0680034373.01.T01:CDS 45.0%
AGATATGGTGATTCTCCTGG+TGG + Chr6:86501321-86501340 MsG0680034373.01.T01:CDS 45.0%
ATCAGACTTCAAGAGGACCA+TGG - Chr6:86507301-86507320 None:intergenic 45.0%
CAAGCATCAAGGATGCATTC+TGG - Chr6:86504733-86504752 None:intergenic 45.0%
CACTGATCAGAAGCAAAGTG+AGG - Chr6:86498070-86498089 None:intergenic 45.0%
CAGTTGCCTGACACAGATAT+AGG + Chr6:86507422-86507441 MsG0680034373.01.T01:CDS 45.0%
CCAACTAAAAGCTGCATACC+AGG - Chr6:86506631-86506650 None:intergenic 45.0%
CCAAGAATGGAGACTATGTC+AGG - Chr6:86500784-86500803 None:intergenic 45.0%
CCTGACATAGTCTCCATTCT+TGG + Chr6:86500781-86500800 MsG0680034373.01.T01:intron 45.0%
CGACGGGAAACATCAAGATT+GGG + Chr6:86501506-86501525 MsG0680034373.01.T01:CDS 45.0%
CGCAAAAGATAGGGACTCTT+TGG + Chr6:86501410-86501429 MsG0680034373.01.T01:CDS 45.0%
CTCAACAGCCATTGGTACAA+GGG - Chr6:86506096-86506115 None:intergenic 45.0%
GAAGGGAGAAGTTCTGTATC+TGG + Chr6:86506934-86506953 MsG0680034373.01.T01:CDS 45.0%
GAAGTGTGAGTTATGCTCCA+AGG + Chr6:86498467-86498486 MsG0680034373.01.T01:intron 45.0%
GACGGGAAACATCAAGATTG+GGG + Chr6:86501507-86501526 MsG0680034373.01.T01:CDS 45.0%
GAGTTATGCTCCAAGGTTCT+TGG + Chr6:86498474-86498493 MsG0680034373.01.T01:intron 45.0%
GATATGGTGATTCTCCTGGT+GGG + Chr6:86501322-86501341 MsG0680034373.01.T01:CDS 45.0%
GATTCCCGACATATGTCACA+TGG + Chr6:86501351-86501370 MsG0680034373.01.T01:CDS 45.0%
GCCACAATTCATAGCATGTG+AGG - Chr6:86504555-86504574 None:intergenic 45.0%
GCGAAGACATTTCGTGTTGA+AGG + Chr6:86500988-86501007 MsG0680034373.01.T01:CDS 45.0%
GCTGATGTGTAAGTATGGCA+TGG - Chr6:86506062-86506081 None:intergenic 45.0%
GCTTAGCATGAGTAGCAATG+AGG - Chr6:86498636-86498655 None:intergenic 45.0%
GGTGAGAAAAACACAAGAGG+GGG - Chr6:86498151-86498170 None:intergenic 45.0%
GGTGAGTGTGAATTCTCTCA+GGG + Chr6:86498678-86498697 MsG0680034373.01.T01:intron 45.0%
GTAGCAGTAACATTCTCAGC+TGG - Chr6:86503306-86503325 None:intergenic 45.0%
GTCTTCACTCTCTTTCTCTC+CGG - Chr6:86501955-86501974 None:intergenic 45.0%
GTGACATAGGTCAGGATTCT+CGG + Chr6:86500962-86500981 MsG0680034373.01.T01:CDS 45.0%
GTGAGAAAAACACAAGAGGG+GGG - Chr6:86498150-86498169 None:intergenic 45.0%
TACACCAACAGAAGTCGGAA+AGG + Chr6:86501377-86501396 MsG0680034373.01.T01:CDS 45.0%
TACATCTGCTCGCTTGAAGA+AGG + Chr6:86506916-86506935 MsG0680034373.01.T01:CDS 45.0%
TACCATGTCCCCAAAAACGA+AGG - Chr6:86503376-86503395 None:intergenic 45.0%
TAGAGATATCCGTAGCGAGA+AGG + Chr6:86501137-86501156 MsG0680034373.01.T01:CDS 45.0%
TAGGACATACAATCTTGCGG+AGG - Chr6:86504137-86504156 None:intergenic 45.0%
TATGGTCTCAAGCTGGTGTT+TGG + Chr6:86507750-86507769 MsG0680034373.01.T01:CDS 45.0%
TCCCTAGTGCCAATTTGGAT+AGG + Chr6:86500204-86500223 MsG0680034373.01.T01:intron 45.0%
TCTCAGGCAGATCATCCAAT+TGG + Chr6:86501075-86501094 MsG0680034373.01.T01:CDS 45.0%
TCTGAGAAGCAGTCAGAAGA+TGG + Chr6:86501909-86501928 MsG0680034373.01.T01:CDS 45.0%
TGACATAGGTCAGGATTCTC+GGG + Chr6:86500963-86500982 MsG0680034373.01.T01:CDS 45.0%
TGAGAAAAACACAAGAGGGG+GGG - Chr6:86498149-86498168 None:intergenic 45.0%
TGGACAGTTCTCATGCATAC+CGG + Chr6:86504041-86504060 MsG0680034373.01.T01:intron 45.0%
TGGTGAGTGTGAATTCTCTC+AGG + Chr6:86498677-86498696 MsG0680034373.01.T01:intron 45.0%
TGGTGTTTGGATTGCAGGAA+AGG + Chr6:86507763-86507782 MsG0680034373.01.T01:CDS 45.0%
TGTTGTCTTGTCTTGTAGCG+TGG - Chr6:86497336-86497355 None:intergenic 45.0%
TTCTCCTTTCCGACTTCTGT+TGG - Chr6:86501384-86501403 None:intergenic 45.0%
TTGAACATGAGACCTTGGGA+AGG - Chr6:86500181-86500200 None:intergenic 45.0%
TTGCTTGTGTGCTTGAGCAT+AGG + Chr6:86497784-86497803 MsG0680034373.01.T01:intron 45.0%
TTGGAAGCTCATGAGACTGT+TGG + Chr6:86501429-86501448 MsG0680034373.01.T01:CDS 45.0%
TTGGAGTATACTCCTTCCCA+AGG + Chr6:86500166-86500185 MsG0680034373.01.T01:intron 45.0%
TTGTAAGAAGCCTCTACCTC+AGG + Chr6:86507532-86507551 MsG0680034373.01.T01:CDS 45.0%
TTGTACCAATGGCTGTTGAG+CGG + Chr6:86506096-86506115 MsG0680034373.01.T01:CDS 45.0%
TTTCCACTGCTACACTTTCG+AGG + Chr6:86503627-86503646 MsG0680034373.01.T01:intron 45.0%
! AATCTCCTTGGAAGTGCAAG+GGG + Chr6:86497926-86497945 MsG0680034373.01.T01:intron 45.0%
! ACAAGCATCTAGAGTAGACG+AGG - Chr6:86505871-86505890 None:intergenic 45.0%
! CAGTCAGAAGATGGATTTGC+TGG + Chr6:86501918-86501937 MsG0680034373.01.T01:CDS 45.0%
! CCTGGTATGCAGCTTTTAGT+TGG + Chr6:86506628-86506647 MsG0680034373.01.T01:intron 45.0%
! CTCACCACTTTGAGTTTACC+AGG - Chr6:86498664-86498683 None:intergenic 45.0%
! GAAATCTCCTTGGAAGTGCA+AGG + Chr6:86497924-86497943 MsG0680034373.01.T01:intron 45.0%
! GATTTAAGGTCTACTCCCTC+CGG - Chr6:86498397-86498416 None:intergenic 45.0%
! GCCAATCTTGAAGCTCGTTT+TGG + Chr6:86502035-86502054 MsG0680034373.01.T01:CDS 45.0%
! GGAACGCACATTGTTTCTCA+GGG - Chr6:86505709-86505728 None:intergenic 45.0%
! GGGAACCTCATAGGCTTTAA+AGG - Chr6:86505207-86505226 None:intergenic 45.0%
! TTGGGAAGGAGTATACTCCA+AGG - Chr6:86500167-86500186 None:intergenic 45.0%
!! AGAAGATGGATTTGCTGGTG+AGG + Chr6:86501923-86501942 MsG0680034373.01.T01:CDS 45.0%
!! AGGGACCTTTAAAGCCTATG+AGG + Chr6:86505199-86505218 MsG0680034373.01.T01:intron 45.0%
!! ATAAGTTCCAAGAGGGTGCT+TGG - Chr6:86505517-86505536 None:intergenic 45.0%
!! TACTGGTTCCTTCCACAATC+CGG - Chr6:86497965-86497984 None:intergenic 45.0%
!! TGCAGCTTTTAGTTGGCACT+TGG + Chr6:86506635-86506654 MsG0680034373.01.T01:intron 45.0%
!! ATTTGAAAAAAAAAATATAA+TGG - Chr6:86502136-86502155 None:intergenic 5.0%
!!! ATTTTAAAAAAAAAAACTAT+GGG + Chr6:86498765-86498784 MsG0680034373.01.T01:intron 5.0%
!!! TATAATAAATTGTTTTTTTA+GGG - Chr6:86499154-86499173 None:intergenic 5.0%
!!! TATTTTAAAAAAAAAAACTA+TGG + Chr6:86498764-86498783 MsG0680034373.01.T01:intron 5.0%
!!! TTTTTTTAAAATAAAAAATG+GGG - Chr6:86498757-86498776 None:intergenic 5.0%
AACAGCCATTGGTACAAGGG+TGG - Chr6:86506093-86506112 None:intergenic 50.0%
ACACTTTCGAGGTCTGCCTT+TGG + Chr6:86503638-86503657 MsG0680034373.01.T01:intron 50.0%
ACAGCCATTGGTACAAGGGT+GGG - Chr6:86506092-86506111 None:intergenic 50.0%
ACTCATGCTAAGCCTAAGCC+TGG + Chr6:86498643-86498662 MsG0680034373.01.T01:CDS 50.0%
ACTGGACTACTTCCGGATTG+TGG + Chr6:86497950-86497969 MsG0680034373.01.T01:intron 50.0%
AGAAAAACACAAGAGGGGGG+GGG - Chr6:86498147-86498166 None:intergenic 50.0%
AGCCTCTATAGCTACAGGGA+GGG - Chr6:86507988-86508007 None:intergenic 50.0%
AGGAAAATGCGTACTCCCTC+CGG + Chr6:86498244-86498263 MsG0680034373.01.T01:intron 50.0%
CAAGCTGGTGTTTGGATTGC+AGG + Chr6:86507758-86507777 MsG0680034373.01.T01:CDS 50.0%
CCACATTCTGCCCAAAGGAA+GGG - Chr6:86503753-86503772 None:intergenic 50.0%
CGAGCAGATGACAGCAACAA+GGG + Chr6:86501177-86501196 MsG0680034373.01.T01:CDS 50.0%
CGGGTGACTGGAATGACATT+TGG + Chr6:86504968-86504987 MsG0680034373.01.T01:intron 50.0%
CTCTACATGTTCGAGAGGCA+GGG - Chr6:86507582-86507601 None:intergenic 50.0%
GAATCCTGACCTATGTCACG+AGG - Chr6:86500961-86500980 None:intergenic 50.0%
GACACACATCCTTCTCGCTA+CGG - Chr6:86501149-86501168 None:intergenic 50.0%
GACAGCGGGAAAACTGTTGA+TGG + Chr6:86501816-86501835 MsG0680034373.01.T01:CDS 50.0%
GACTACTTCCGGATTGTGGA+AGG + Chr6:86497954-86497973 MsG0680034373.01.T01:intron 50.0%
GAGAAAAACACAAGAGGGGG+GGG - Chr6:86498148-86498167 None:intergenic 50.0%
GCATGTGCGCAACTCTTGTA+TGG - Chr6:86504102-86504121 None:intergenic 50.0%
GCTCAACAGCCATTGGTACA+AGG - Chr6:86506097-86506116 None:intergenic 50.0%
GCTTCAAGATTGGCGACTAG+AGG - Chr6:86502029-86502048 None:intergenic 50.0%
GGTAACACAGTTTCGCGCTT+AGG - Chr6:86501771-86501790 None:intergenic 50.0%
GTGGCACCCTTTATCCAAGA+GGG - Chr6:86506784-86506803 None:intergenic 50.0%
GTTGAAACCGAACCGCTTTC+AGG + Chr6:86505346-86505365 MsG0680034373.01.T01:intron 50.0%
TATTGCACCAAGCACCCTCT+TGG + Chr6:86505507-86505526 MsG0680034373.01.T01:intron 50.0%
TCCACATTCTGCCCAAAGGA+AGG - Chr6:86503754-86503773 None:intergenic 50.0%
TCGAGCAGATGACAGCAACA+AGG + Chr6:86501176-86501195 MsG0680034373.01.T01:CDS 50.0%
TCGTGTTGAAGGTCGTGATG+CGG + Chr6:86500999-86501018 MsG0680034373.01.T01:CDS 50.0%
TCTACATGTTCGAGAGGCAG+GGG - Chr6:86507581-86507600 None:intergenic 50.0%
TGAGCGGGCAATAACTACCA+GGG + Chr6:86506112-86506131 MsG0680034373.01.T01:CDS 50.0%
TGATTCTCCTGGTGGGAGTT+TGG + Chr6:86501329-86501348 MsG0680034373.01.T01:CDS 50.0%
TGGCACCCTTTATCCAAGAG+GGG - Chr6:86506783-86506802 None:intergenic 50.0%
TGGTTAGCAGCCCCTTGAAT+TGG + Chr6:86501271-86501290 MsG0680034373.01.T01:CDS 50.0%
TGTACCAATGGCTGTTGAGC+GGG + Chr6:86506097-86506116 MsG0680034373.01.T01:CDS 50.0%
TGTGGCACCCTTTATCCAAG+AGG - Chr6:86506785-86506804 None:intergenic 50.0%
TTGAGCGGGCAATAACTACC+AGG + Chr6:86506111-86506130 MsG0680034373.01.T01:CDS 50.0%
TTTGAATGTCCCGTGTTGGG+TGG + Chr6:86503006-86503025 MsG0680034373.01.T01:intron 50.0%
TTTGCTGGTGAGGAAGAGAC+CGG + Chr6:86501933-86501952 MsG0680034373.01.T01:CDS 50.0%
! ACGCACATTGTTTCTCAGGG+TGG - Chr6:86505706-86505725 None:intergenic 50.0%
! AGACCTCGAAAGTGTAGCAG+TGG - Chr6:86503633-86503652 None:intergenic 50.0%
! ATCTCCTTGGAAGTGCAAGG+GGG + Chr6:86497927-86497946 MsG0680034373.01.T01:intron 50.0%
! ATCTGGAGTCACACTCATGC+AGG + Chr6:86506951-86506970 MsG0680034373.01.T01:CDS 50.0%
! CTGCAGAGTAGTGGAGATAG+TGG - Chr6:86497310-86497329 None:intergenic 50.0%
! GAGTCCCTATCTTTTGCGGT+TGG - Chr6:86501408-86501427 None:intergenic 50.0%
! GGGAACGCACATTGTTTCTC+AGG - Chr6:86505710-86505729 None:intergenic 50.0%
!! AAGTGTCGGTGCTACATAGG+TGG + Chr6:86500016-86500035 MsG0680034373.01.T01:intron 50.0%
!! ACAAGGGCACCAGACATGAA+AGG + Chr6:86501193-86501212 MsG0680034373.01.T01:CDS 50.0%
!! ATCAGTGTCGGTGTCATGCT+CGG - Chr6:86499919-86499938 None:intergenic 50.0%
!! CAAGGGCACCAGACATGAAA+GGG + Chr6:86501194-86501213 MsG0680034373.01.T01:CDS 50.0%
!! CCAAAGTGTCGGTGCTACAT+AGG + Chr6:86500013-86500032 MsG0680034373.01.T01:intron 50.0%
!! CCTATGTAGCACCGACACTT+TGG - Chr6:86500016-86500035 None:intergenic 50.0%
!! GTGGTATTGGCTTGTGACCT+TGG + Chr6:86500147-86500166 MsG0680034373.01.T01:intron 50.0%
!! TGAGCGGTGTTGCATTGTGA+AGG + Chr6:86505767-86505786 MsG0680034373.01.T01:CDS 50.0%
!! TGCCTTCGTTTTTGGGGACA+TGG + Chr6:86503371-86503390 MsG0680034373.01.T01:intron 50.0%
!! TTTGAATCCTCTGGGTTGGC+CGG + Chr6:86500124-86500143 MsG0680034373.01.T01:intron 50.0%
AAAAACACAAGAGGGGGGGG+GGG - Chr6:86498145-86498164 None:intergenic 55.0%
AACTACCAGGGCTGCAGCTT+CGG + Chr6:86506124-86506143 MsG0680034373.01.T01:CDS 55.0%
AAGGGGGACTGGACTACTTC+CGG + Chr6:86497943-86497962 MsG0680034373.01.T01:intron 55.0%
AATGTGCGTTCCCGAGCTTG+GGG + Chr6:86505717-86505736 MsG0680034373.01.T01:CDS 55.0%
ACAACCTCTGCAATGAGCCC+TGG + Chr6:86506610-86506629 MsG0680034373.01.T01:CDS 55.0%
ACAATGTGCGTTCCCGAGCT+TGG + Chr6:86505715-86505734 MsG0680034373.01.T01:CDS 55.0%
ACACATCAGTCCCCCATAGC+TGG - Chr6:86503894-86503913 None:intergenic 55.0%
ACCCTTCATTGTCTTGGGCG+TGG - Chr6:86502064-86502083 None:intergenic 55.0%
ACTGTGCGCATCACTTCCTG+AGG - Chr6:86507551-86507570 None:intergenic 55.0%
ATTGCCCGCTCAACAGCCAT+TGG - Chr6:86506104-86506123 None:intergenic 55.0%
CAATGTGCGTTCCCGAGCTT+GGG + Chr6:86505716-86505735 MsG0680034373.01.T01:CDS 55.0%
CACATCAGTCCCCCATAGCT+GGG - Chr6:86503893-86503912 None:intergenic 55.0%
CACCACGTTCCTCGTGACAT+AGG + Chr6:86500949-86500968 MsG0680034373.01.T01:CDS 55.0%
CACTGTTGGGCGACAGTAAC+CGG - Chr6:86504063-86504082 None:intergenic 55.0%
CAGCCTCTATAGCTACAGGG+AGG - Chr6:86507989-86508008 None:intergenic 55.0%
CAGGAAGTGATGCGCACAGT+TGG + Chr6:86507551-86507570 MsG0680034373.01.T01:CDS 55.0%
CATACCAGGGCTCATTGCAG+AGG - Chr6:86506617-86506636 None:intergenic 55.0%
CATAGGTCAGGATTCTCGGG+TGG + Chr6:86500966-86500985 MsG0680034373.01.T01:CDS 55.0%
CCCACGCCCAAGACAATGAA+GGG + Chr6:86502060-86502079 MsG0680034373.01.T01:CDS 55.0%
CCCTTCATTGTCTTGGGCGT+GGG - Chr6:86502063-86502082 None:intergenic 55.0%
CCCTTCCTTTGGGCAGAATG+TGG + Chr6:86503750-86503769 MsG0680034373.01.T01:intron 55.0%
CCTCTACATGTTCGAGAGGC+AGG - Chr6:86507583-86507602 None:intergenic 55.0%
CCTGCCTCTCGAACATGTAG+AGG + Chr6:86507580-86507599 MsG0680034373.01.T01:CDS 55.0%
CCTTCATTGTCTTGGGCGTG+GGG - Chr6:86502062-86502081 None:intergenic 55.0%
CGCATCACTTCCTGAGGTAG+AGG - Chr6:86507545-86507564 None:intergenic 55.0%
CGTTCCTCGTGACATAGGTC+AGG + Chr6:86500954-86500973 MsG0680034373.01.T01:CDS 55.0%
CTACATGTTCGAGAGGCAGG+GGG - Chr6:86507580-86507599 None:intergenic 55.0%
CTATGTCACGAGGAACGTGG+TGG - Chr6:86500951-86500970 None:intergenic 55.0%
GAAAAACACAAGAGGGGGGG+GGG - Chr6:86498146-86498165 None:intergenic 55.0%
GACCTATGTCACGAGGAACG+TGG - Chr6:86500954-86500973 None:intergenic 55.0%
GCCTCTATAGCTACAGGGAG+GGG - Chr6:86507987-86508006 None:intergenic 55.0%
GGCACCCTTTATCCAAGAGG+GGG - Chr6:86506782-86506801 None:intergenic 55.0%
GGTCACAAGCCAATACCACC+CGG - Chr6:86500146-86500165 None:intergenic 55.0%
GTGTCAGGCAACTGAGTTGC+TGG - Chr6:86507416-86507435 None:intergenic 55.0%
TAATACCCCGCCACCCAACA+CGG - Chr6:86503019-86503038 None:intergenic 55.0%
TCCCCTCCCTGTAGCTATAG+AGG + Chr6:86507983-86508002 MsG0680034373.01.T01:three_prime_UTR 55.0%
TGAGCCCACCCTTGTACCAA+TGG + Chr6:86506085-86506104 MsG0680034373.01.T01:CDS 55.0%
! AGTTGAAGCACCCCAAGCTC+GGG - Chr6:86505730-86505749 None:intergenic 55.0%
! CAGTTGAAGCACCCCAAGCT+CGG - Chr6:86505731-86505750 None:intergenic 55.0%
!! TTGAATCCTCTGGGTTGGCC+GGG + Chr6:86500125-86500144 MsG0680034373.01.T01:intron 55.0%
AAAACACAAGAGGGGGGGGG+GGG - Chr6:86498144-86498163 None:intergenic 60.0%
AACAGTGTCTCGTCCTCCCG+CGG + Chr6:86504076-86504095 MsG0680034373.01.T01:CDS 60.0%
AACTCTTGTATGGCCGCGGG+AGG - Chr6:86504092-86504111 None:intergenic 60.0%
AATACCCCGCCACCCAACAC+GGG - Chr6:86503018-86503037 None:intergenic 60.0%
AATGTCCCGTGTTGGGTGGC+GGG + Chr6:86503010-86503029 MsG0680034373.01.T01:intron 60.0%
ACAAACCGAAGCTGCAGCCC+TGG - Chr6:86506132-86506151 None:intergenic 60.0%
ACGCGCCTCGCCGTTATTCA+AGG + Chr6:86499499-86499518 MsG0680034373.01.T01:intron 60.0%
CAGTCCCCCTTGCACTTCCA+AGG - Chr6:86497934-86497953 None:intergenic 60.0%
CCCCACGCCCAAGACAATGA+AGG + Chr6:86502059-86502078 MsG0680034373.01.T01:CDS 60.0%
CGCAACTCTTGTATGGCCGC+GGG - Chr6:86504095-86504114 None:intergenic 60.0%
CGGGAATCCAAACTCCCACC+AGG - Chr6:86501339-86501358 None:intergenic 60.0%
CGGGAGGACGAGACACTGTT+GGG - Chr6:86504076-86504095 None:intergenic 60.0%
GAATGTCCCGTGTTGGGTGG+CGG + Chr6:86503009-86503028 MsG0680034373.01.T01:intron 60.0%
GCGCAACTCTTGTATGGCCG+CGG - Chr6:86504096-86504115 None:intergenic 60.0%
GCGTGGACACTGCAGAGTAG+TGG - Chr6:86497319-86497338 None:intergenic 60.0%
! CGAGCTTGGGGTGCTTCAAC+TGG + Chr6:86505729-86505748 MsG0680034373.01.T01:CDS 60.0%
! CTTGGAAGTGCAAGGGGGAC+TGG + Chr6:86497932-86497951 MsG0680034373.01.T01:intron 60.0%
!! AGGTCAGAGGTGCCCAGCTA+TGG + Chr6:86503878-86503897 MsG0680034373.01.T01:intron 60.0%
!! GGTCAGAGGTGCCCAGCTAT+GGG + Chr6:86503879-86503898 MsG0680034373.01.T01:intron 60.0%
!! GTCAGAGGTGCCCAGCTATG+GGG + Chr6:86503880-86503899 MsG0680034373.01.T01:CDS 60.0%
!! TCAGAGGTGCCCAGCTATGG+GGG + Chr6:86503881-86503900 MsG0680034373.01.T01:CDS 60.0%
AAACACAAGAGGGGGGGGGG+GGG - Chr6:86498143-86498162 None:intergenic 65.0%
ATACCACCCGGCCAACCCAG+AGG - Chr6:86500134-86500153 None:intergenic 65.0%
ATGTCCCGTGTTGGGTGGCG+GGG + Chr6:86503011-86503030 MsG0680034373.01.T01:intron 65.0%
GCGGGAGGACGAGACACTGT+TGG - Chr6:86504077-86504096 None:intergenic 65.0%
!! AATCCTCTGGGTTGGCCGGG+TGG + Chr6:86500128-86500147 MsG0680034373.01.T01:intron 65.0%
!! CTGGGTTGGCCGGGTGGTAT+TGG + Chr6:86500134-86500153 MsG0680034373.01.T01:intron 65.0%
AACACAAGAGGGGGGGGGGG+GGG - Chr6:86498142-86498161 None:intergenic 70.0%
ACACAAGAGGGGGGGGGGGG+GGG - Chr6:86498141-86498160 None:intergenic 75.0%
! ACAAGAGGGGGGGGGGGGGG+GGG - Chr6:86498139-86498158 None:intergenic 80.0%
! CACAAGAGGGGGGGGGGGGG+GGG - Chr6:86498140-86498159 None:intergenic 80.0%
! AAGAGGGGGGGGGGGGGGGG+GGG - Chr6:86498137-86498156 None:intergenic 85.0%
! CAAGAGGGGGGGGGGGGGGG+GGG - Chr6:86498138-86498157 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
Chr6 gene 86497199 86508050 86497199 ID=MsG0680034373.01;Name=MsG0680034373.01
Chr6 mRNA 86497199 86508050 86497199 ID=MsG0680034373.01.T01;Parent=MsG0680034373.01;Name=MsG0680034373.01.T01;_AED=0.37;_eAED=0.37;_QI=0|0.66|0.69|0.76|1|1|13|224|835
Chr6 exon 86497199 86497274 86497199 ID=MsG0680034373.01.T01:exon:7310;Parent=MsG0680034373.01.T01
Chr6 exon 86498599 86498678 86498599 ID=MsG0680034373.01.T01:exon:7311;Parent=MsG0680034373.01.T01
Chr6 exon 86500811 86502081 86500811 ID=MsG0680034373.01.T01:exon:7312;Parent=MsG0680034373.01.T01
Chr6 exon 86502827 86502834 86502827 ID=MsG0680034373.01.T01:exon:7313;Parent=MsG0680034373.01.T01
Chr6 exon 86503154 86503335 86503154 ID=MsG0680034373.01.T01:exon:7314;Parent=MsG0680034373.01.T01
Chr6 exon 86503880 86503940 86503880 ID=MsG0680034373.01.T01:exon:7315;Parent=MsG0680034373.01.T01
Chr6 exon 86504048 86504146 86504048 ID=MsG0680034373.01.T01:exon:7316;Parent=MsG0680034373.01.T01
Chr6 exon 86505694 86505788 86505694 ID=MsG0680034373.01.T01:exon:7317;Parent=MsG0680034373.01.T01
Chr6 exon 86506032 86506145 86506032 ID=MsG0680034373.01.T01:exon:7318;Parent=MsG0680034373.01.T01
Chr6 exon 86506564 86506631 86506564 ID=MsG0680034373.01.T01:exon:7319;Parent=MsG0680034373.01.T01
Chr6 exon 86506862 86506972 86506862 ID=MsG0680034373.01.T01:exon:7320;Parent=MsG0680034373.01.T01
Chr6 exon 86507370 86507601 86507370 ID=MsG0680034373.01.T01:exon:7321;Parent=MsG0680034373.01.T01
Chr6 exon 86507716 86508050 86507716 ID=MsG0680034373.01.T01:exon:7322;Parent=MsG0680034373.01.T01
Chr6 CDS 86497199 86497274 86497199 ID=MsG0680034373.01.T01:cds;Parent=MsG0680034373.01.T01
Chr6 CDS 86498599 86498678 86498599 ID=MsG0680034373.01.T01:cds;Parent=MsG0680034373.01.T01
Chr6 CDS 86500811 86502081 86500811 ID=MsG0680034373.01.T01:cds;Parent=MsG0680034373.01.T01
Chr6 CDS 86502827 86502834 86502827 ID=MsG0680034373.01.T01:cds;Parent=MsG0680034373.01.T01
Chr6 CDS 86503154 86503335 86503154 ID=MsG0680034373.01.T01:cds;Parent=MsG0680034373.01.T01
Chr6 CDS 86503880 86503940 86503880 ID=MsG0680034373.01.T01:cds;Parent=MsG0680034373.01.T01
Chr6 CDS 86504048 86504146 86504048 ID=MsG0680034373.01.T01:cds;Parent=MsG0680034373.01.T01
Chr6 CDS 86505694 86505788 86505694 ID=MsG0680034373.01.T01:cds;Parent=MsG0680034373.01.T01
Chr6 CDS 86506032 86506145 86506032 ID=MsG0680034373.01.T01:cds;Parent=MsG0680034373.01.T01
Chr6 CDS 86506564 86506631 86506564 ID=MsG0680034373.01.T01:cds;Parent=MsG0680034373.01.T01
Chr6 CDS 86506862 86506972 86506862 ID=MsG0680034373.01.T01:cds;Parent=MsG0680034373.01.T01
Chr6 CDS 86507370 86507601 86507370 ID=MsG0680034373.01.T01:cds;Parent=MsG0680034373.01.T01
Chr6 CDS 86507716 86507826 86507716 ID=MsG0680034373.01.T01:cds;Parent=MsG0680034373.01.T01
Chr6 three_prime_UTR 86507827 86508050 86507827 ID=MsG0680034373.01.T01:three_prime_utr;Parent=MsG0680034373.01.T01
Gene Sequence

>MsG0680034373.01.T01

ATGCAGAAGACTGGGAATGCAATGCAACGGTCATTTGGTGAAGATTTGAAGGCTTTGGATGCTTATCTTCAAAAGCGTGGTGCACACTCCTTAATTGTGACTTTGTTTCTCCTCATTGCTACTCATGCTAAGCCTAAGCCTGGTAAACTCAAAGTGTTACTGACAAGCAAGGGTTATTTGGTCGTCGTATTATTTAGTTTTGAGGTTTATGACCGAGTTGGAGAGACTTCTTCAAAGCATCTACATCAAGATTCAGAGGTACTTTCAAAGTTGCTTTCATTAGTTTCGATGGACCACCACGTTCCTCGTGACATAGGTCAGGATTCTCGGGTGGCGAAGACATTTCGTGTTGAAGGTCGTGATGCGGATAGAAGATCTCCTCTTCATTCAGTTTATCACATGCCGTTATCTTCAAATGATTCTCAGGCAGATCATCCAATTGGAACTGATAACAGGATAGAATCAAGGGATCTGAAGGATAATAGAGATATCCGTAGCGAGAAGGATGTGTGTCTTGAAAGTCGAGCAGATGACAGCAACAAGGGCACCAGACATGAAAGGGATAGTCATAATGATACAAAAGGTGATATTAAGACAGAGAAGGTCACATTTGGTTTGGTTAGCAGCCCCTTGAATTGGAAAGACTCGAAAGATTTCAGGGGAAAAAGATATGGTGATTCTCCTGGTGGGAGTTTGGATTCCCGACATATGTCACATGGAAATACACCAACAGAAGTCGGAAAGGAGAATCCAACCGCAAAAGATAGGGACTCTTTGGAAGCTCATGAGACTGTTGGTGAAAACAGAATTGATTCTAAAAGTGAAGATAGATTTAAAGATAGAAAAAGAAACGACGGGAAACATCAAGATTGGGGAGACAAGGAAAAAGACAGAAGTGATCGCAGAAACAGTACACAAGTTAACAATAACATTGGTGAAAACAAAGAATCTGCCAAAGAAGATCAAGAAGCAGAAAAGTTGGAGAAGGAGAAGAAAGATATTCCAAAAAACAGAGAAATTTCAAAAGAGCACATGAAGAGGGAATCAATGAATGGAATGGAGAAAGAAGTTTCATATAATGAGAAGGAAGTTGGTGATGGATCAGTAAAAATTCCTAAGCGCGAAACTGTGTTACCAGAACAGAAGAAACACAAAGATGTTGACAGCGGGAAAACTGTTGATGGTGAAACTAGAGATAGGAGGAAAGAACGGGACAATGATTTAGAAGGAGATCGACCTGATAAGCGCTTTAAATCTGAGAAGCAGTCAGAAGATGGATTTGCTGGTGAGGAAGAGACCGGAGAGAAAGAGAGTGAAGACCATAGTTGTAATGTTCAGCATCGTAAGAGGATACAAAGATCGAGAGCTAGTCCTCTAGTCGCCAATCTTGAAGCTCGTTTTGGACCCCACGCCCAAGACAATGAAGGGTTTCAAGGTAAAGCAGGAGTATCACATGTTACATATAAAGTTGGTGAAAGTGTGCTAGAACTGATCAAGTTGTGGAAGGAATACGAATCATCTCAATCTCAAGTTGAAAAAAAAGCTGAAAGCTCTAATGATGGTCCCACTCTTGAAATTCGGATACCAGCTGAGAATGTTACTGCTACAAATCACCAAGTCAGAGGTGCCCAGCTATGGGGGACTGATGTGTACACATATGACTCAGATCTTGTTGCTGTTCTCATGCATACCGGTTACTGTCGCCCAACAGTGTCTCGTCCTCCCGCGGCCATACAAGAGTTGCGCACATGCATTAGGGTGCTACCTCCGCAAGATTGCTATATATCCACCCTGAGAAACAATGTGCGTTCCCGAGCTTGGGGTGCTTCAACTGGTTGTAGTTTTAGAGTTGAGCGGTGTTGCATTGTGAAGAAAAGTGGTGGAACTATTGATCTTGAACCATGCCATACTTACACATCAGCTATTGAGCCCACCCTTGTACCAATGGCTGTTGAGCGGGCAATAACTACCAGGGCTGCAGCTTCGAATACATCGCGGAAACAAAGATTTGTAAGAGAAGTCACTATTCAGTACAACCTCTGCAATGAGCCCTGGATCAAGTATAGTATCAGCATTGTTGCTGACAAAGGACTAAAAAGGCCACTCTATACATCTGCTCGCTTGAAGAAGGGAGAAGTTCTGTATCTGGAGTCACACTCATGCAGATATGAGCTCTGTTTTGCTGGAGAGAAAATGGTAAAAGATATACCAGCAACTCAGTTGCCTGACACAGATATAGGAAAGTCTCAAAATCATCACATGCATACCACAAATGGTGAAAAAGCTGATTCGGATAATGTCACAATTGACGTATTTCGTTGGTCTCGTTGTAAGAAGCCTCTACCTCAGGAAGTGATGCGCACAGTTGGCATCCCCCTGCCTCTCGAACATGTAGAGGTGCTAGAAGAAAATATAGATTGGGAAGATATTCTATGGTCTCAAGCTGGTGTTTGGATTGCAGGAAAGGAATATGCCCTTTCAAGGGTGCATTTCATGTCAATGGATTAG
Protein sequence

>MsG0680034373.01.T01

MQKTGNAMQRSFGEDLKALDAYLQKRGAHSLIVTLFLLIATHAKPKPGKLKVLLTSKGYLVVVLFSFEVYDRVGETSSKHLHQDSEVLSKLLSLVSMDHHVPRDIGQDSRVAKTFRVEGRDADRRSPLHSVYHMPLSSNDSQADHPIGTDNRIESRDLKDNRDIRSEKDVCLESRADDSNKGTRHERDSHNDTKGDIKTEKVTFGLVSSPLNWKDSKDFRGKRYGDSPGGSLDSRHMSHGNTPTEVGKENPTAKDRDSLEAHETVGENRIDSKSEDRFKDRKRNDGKHQDWGDKEKDRSDRRNSTQVNNNIGENKESAKEDQEAEKLEKEKKDIPKNREISKEHMKRESMNGMEKEVSYNEKEVGDGSVKIPKRETVLPEQKKHKDVDSGKTVDGETRDRRKERDNDLEGDRPDKRFKSEKQSEDGFAGEEETGEKESEDHSCNVQHRKRIQRSRASPLVANLEARFGPHAQDNEGFQGKAGVSHVTYKVGESVLELIKLWKEYESSQSQVEKKAESSNDGPTLEIRIPAENVTATNHQVRGAQLWGTDVYTYDSDLVAVLMHTGYCRPTVSRPPAAIQELRTCIRVLPPQDCYISTLRNNVRSRAWGASTGCSFRVERCCIVKKSGGTIDLEPCHTYTSAIEPTLVPMAVERAITTRAAASNTSRKQRFVREVTIQYNLCNEPWIKYSISIVADKGLKRPLYTSARLKKGEVLYLESHSCRYELCFAGEKMVKDIPATQLPDTDIGKSQNHHMHTTNGEKADSDNVTIDVFRWSRCKKPLPQEVMRTVGIPLPLEHVEVLEENIDWEDILWSQAGVWIAGKEYALSRVHFMSMD*