AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680035643.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680035643.01.T01 MTR_6g086340 93.474 475 22 1 4 469 26 500 0.0 892
MsG0680035643.01.T01 MTR_6g086300 78.526 475 93 2 4 469 28 502 0.0 759
MsG0680035643.01.T01 MTR_6g086300 78.526 475 93 2 4 469 28 502 0.0 759
MsG0680035643.01.T01 MTR_8g083530 73.474 475 117 1 4 469 29 503 0.0 732
MsG0680035643.01.T01 MTR_8g083520 74.249 466 96 2 4 469 20 461 0.0 726
MsG0680035643.01.T01 MTR_8g083520 74.568 405 79 2 65 469 1 381 0.0 636
MsG0680035643.01.T01 MTR_4g107040 54.105 475 209 1 4 469 70 544 0.0 541
MsG0680035643.01.T01 MTR_3g078170 54.316 475 208 1 4 469 68 542 0.0 533
MsG0680035643.01.T01 MTR_8g064170 54.526 475 207 1 4 469 67 541 0.0 533
MsG0680035643.01.T01 MTR_8g064170 50.526 475 194 2 4 469 67 509 3.83e-168 483
MsG0680035643.01.T01 MTR_8g083530 69.279 319 89 1 4 313 29 347 7.61e-161 460
MsG0680035643.01.T01 MTR_3g078170 52.699 389 175 1 4 383 68 456 8.51e-143 417
MsG0680035643.01.T01 MTR_3g078170 52.342 363 164 1 4 357 68 430 1.31e-130 385
MsG0680035643.01.T01 MTR_3g078170 52.342 363 164 1 4 357 68 430 2.23e-130 385
MsG0680035643.01.T01 MTR_3g078550 40.928 474 260 6 13 468 23 494 6.18e-110 335
MsG0680035643.01.T01 MTR_3g078550 41.485 458 248 6 29 468 9 464 4.35e-107 326
MsG0680035643.01.T01 MTR_3g078490 40.084 474 264 6 13 468 53 524 9.21e-107 327
MsG0680035643.01.T01 MTR_4g106510 40.795 478 255 8 13 468 23 494 1.61e-104 320
MsG0680035643.01.T01 MTR_2g067660 34.934 458 284 5 12 459 61 514 2.98e-90 284
MsG0680035643.01.T01 MTR_1690s0010 39.118 340 191 6 4 331 15 350 2.04e-64 212
MsG0680035643.01.T01 MTR_3g078490 38.629 321 179 5 13 317 23 341 1.93e-56 191
MsG0680035643.01.T01 MTR_2g009750 32.000 475 296 12 4 459 21 487 3.67e-55 192
MsG0680035643.01.T01 MTR_4g093170 31.789 475 297 12 4 459 48 514 4.54e-55 192
MsG0680035643.01.T01 MTR_2g009750 31.857 474 297 12 4 459 20 485 1.27e-54 190
MsG0680035643.01.T01 MTR_2g009750 31.857 474 297 12 4 459 21 486 1.40e-54 190
MsG0680035643.01.T01 MTR_1g014320 28.632 475 306 12 12 464 30 493 5.20e-51 181
MsG0680035643.01.T01 MTR_2g034160 28.059 474 310 12 10 459 61 527 1.82e-50 181
MsG0680035643.01.T01 MTR_4g131180 29.114 474 304 12 12 467 30 489 7.25e-50 177
MsG0680035643.01.T01 MTR_4g131180 29.206 428 275 10 12 422 30 446 2.32e-47 170
MsG0680035643.01.T01 MTR_2g042330 27.010 485 327 14 2 466 21 498 1.65e-46 169
MsG0680035643.01.T01 MTR_1399s0020 26.923 364 219 5 98 457 15 335 3.25e-30 120
MsG0680035643.01.T01 MTR_8g076480 29.118 340 222 10 132 459 106 438 4.17e-26 111
MsG0680035643.01.T01 MTR_2g097950 26.744 430 257 15 70 464 51 457 1.94e-24 106
MsG0680035643.01.T01 MTR_2g097950 26.794 418 237 15 70 464 51 422 5.93e-24 104
MsG0680035643.01.T01 MTR_8g094600 27.168 346 231 9 134 466 168 505 1.95e-23 103
MsG0680035643.01.T01 MTR_1g029840 28.462 390 240 16 88 459 77 445 4.68e-23 102
MsG0680035643.01.T01 MTR_1g029840 28.462 390 240 16 88 459 77 445 5.33e-23 102
MsG0680035643.01.T01 MTR_3g088150 26.923 338 228 10 134 459 117 447 2.93e-21 96.7
MsG0680035643.01.T01 MTR_1222s0010 29.560 318 188 16 134 430 105 407 8.09e-20 93.2
MsG0680035643.01.T01 MTR_1314s0010 26.513 347 224 10 135 460 1 337 8.62e-19 87.8
MsG0680035643.01.T01 MTR_4g065040 27.152 302 200 9 134 422 104 398 1.54e-16 82.4
MsG0680035643.01.T01 MTR_1g071870 69.048 42 13 0 411 452 227 268 2.93e-13 72.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680035643.01.T01 AT3G24503 67.017 476 147 2 4 469 26 501 0.0 671
MsG0680035643.01.T01 AT3G48000 53.684 475 211 1 4 469 64 538 0.0 536
MsG0680035643.01.T01 AT1G23800 53.895 475 210 1 4 469 60 534 0.0 528
MsG0680035643.01.T01 AT3G48170 42.300 487 253 9 4 468 14 494 9.73e-125 372
MsG0680035643.01.T01 AT1G74920 41.719 477 252 7 13 468 23 494 1.57e-119 359
MsG0680035643.01.T01 AT1G74920 41.509 477 248 8 13 468 23 489 2.22e-117 353
MsG0680035643.01.T01 AT1G23800 51.852 324 147 1 4 318 60 383 2.15e-110 332
MsG0680035643.01.T01 AT1G79440 36.105 457 278 5 13 459 68 520 3.71e-88 279
MsG0680035643.01.T01 AT2G14170 32.842 475 292 12 4 459 11 477 1.02e-61 209
MsG0680035643.01.T01 AT2G14170 32.842 475 292 12 4 459 120 586 2.13e-60 208
MsG0680035643.01.T01 AT2G14170 33.563 435 265 10 4 422 120 546 6.52e-60 206
MsG0680035643.01.T01 AT2G24270 30.372 484 288 15 12 465 30 494 7.16e-52 183
MsG0680035643.01.T01 AT2G24270 30.372 484 288 15 12 465 30 494 7.16e-52 183
MsG0680035643.01.T01 AT2G24270 30.372 484 288 15 12 465 30 494 1.01e-51 182
MsG0680035643.01.T01 AT2G24270 30.372 484 288 15 12 465 70 534 1.44e-51 183
MsG0680035643.01.T01 AT1G54100 27.699 491 316 16 2 466 20 497 9.38e-48 172
MsG0680035643.01.T01 AT1G54100 27.699 491 316 16 2 466 20 497 9.38e-48 172
MsG0680035643.01.T01 AT3G66658 28.178 472 306 13 13 459 64 527 9.89e-47 170
MsG0680035643.01.T01 AT3G66658 28.000 475 309 13 10 459 61 527 2.47e-46 170
MsG0680035643.01.T01 AT1G44170 29.204 339 219 11 134 459 111 441 1.14e-26 112
MsG0680035643.01.T01 AT1G44170 29.204 339 219 11 134 459 111 441 1.14e-26 112
MsG0680035643.01.T01 AT1G44170 29.204 339 219 11 134 459 48 378 1.35e-26 111
MsG0680035643.01.T01 AT4G36250 26.906 446 276 17 31 446 2 427 1.73e-21 97.4
MsG0680035643.01.T01 AT4G34240 29.394 330 204 11 134 446 32 349 3.33e-20 92.8
MsG0680035643.01.T01 AT4G34240 29.394 330 204 11 134 446 174 491 8.88e-20 92.4
MsG0680035643.01.T01 AT4G34240 29.394 330 204 11 134 446 159 476 9.46e-20 92.4

Find 107 sgRNAs with CRISPR-Local

Find 254 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGGTAGCTTCTGCTATTT+TGG 0.126135 6:-109872713 None:intergenic
CCTCTTGGTTCTGCTCAATT+AGG 0.146809 6:-109874015 None:intergenic
GTAATCACTTCTTCTGTTCT+TGG 0.154923 6:-109872691 None:intergenic
TTTGATATTGATTGCCCTTT+TGG 0.202054 6:+109876436 MsG0680035643.01.T01:CDS
GCTGTTGATCTTGCTCTATT+TGG 0.206043 6:+109875157 MsG0680035643.01.T01:CDS
CCCTGCTGCTAGGCCATATT+TGG 0.222361 6:-109876329 None:intergenic
TGGGGTCCTTGTTGAACTTT+AGG 0.227903 6:-109875395 None:intergenic
CTCTTGGTTCTGCTCAATTA+GGG 0.242841 6:-109874014 None:intergenic
AGGGATTGTGACAAAGAATT+TGG 0.263862 6:+109876348 MsG0680035643.01.T01:CDS
ATAGCACAAGATGAAATATT+TGG 0.265938 6:+109875861 MsG0680035643.01.T01:CDS
AAGCCTGTATCACTTGAATT+AGG 0.271049 6:+109875089 MsG0680035643.01.T01:CDS
ATTCATCGTAAATCCCTTCT+TGG 0.275084 6:-109875316 None:intergenic
TGAAATATTTGGACCTGTTA+TGG 0.283168 6:+109875872 MsG0680035643.01.T01:CDS
AGTGGATATGGAAGAGATTA+TGG 0.289197 6:+109876472 MsG0680035643.01.T01:CDS
AGCAATATCAACATCTTCTT+TGG 0.291243 6:-109872731 None:intergenic
ATAGGAGAGAGCAAAGATTA+TGG 0.291747 6:+109873979 MsG0680035643.01.T01:intron
CACTTCTCCATGAACTTTAT+CGG 0.292029 6:-109874143 None:intergenic
TGATATACTTATATGCATAT+TGG 0.297647 6:+109872622 None:intergenic
ATTCTTTCCATGTTTAATAT+AGG 0.304720 6:-109875644 None:intergenic
GAGAAGTGTTCAAAACTTCT+AGG 0.308999 6:+109874158 MsG0680035643.01.T01:CDS
TGCTAAGGCTGCTCCTTGTT+TGG 0.309023 6:+109874264 MsG0680035643.01.T01:CDS
GGGTATAAGATGAGTGGATA+TGG 0.326692 6:+109876460 MsG0680035643.01.T01:CDS
AAGGCCAACAATACCAAATA+TGG 0.331879 6:+109876316 MsG0680035643.01.T01:CDS
GAAGGAGCCACATTATTAAC+TGG 0.343248 6:+109875667 MsG0680035643.01.T01:CDS
CGTAGGATATTGGCTGCTTC+AGG 0.356504 6:-109874103 None:intergenic
CTCAATGTACTGCCAGGATT+TGG 0.358680 6:+109874849 MsG0680035643.01.T01:CDS
TAGGCCATATTTGGTATTGT+TGG 0.360370 6:-109876320 None:intergenic
GTGTTTGCTCAGCAGGCTTA+AGG 0.360744 6:-109874306 None:intergenic
TTTGGCTGCTGGTTGTACTA+TGG 0.362514 6:+109874282 MsG0680035643.01.T01:CDS
AACTGTTATGTTCTTTGCTA+AGG 0.366049 6:+109874249 MsG0680035643.01.T01:CDS
GAGCAAAGATTATGGTGAAA+TGG 0.367613 6:+109873987 MsG0680035643.01.T01:CDS
CTTCTTAATTCCTTCCTCAA+TGG 0.367868 6:-109876296 None:intergenic
CAATTCGTGCAGGTATCATT+TGG 0.382886 6:+109876395 MsG0680035643.01.T01:CDS
TTTACAGGTTCAACTGAAAC+AGG 0.388979 6:+109875029 MsG0680035643.01.T01:CDS
CCTCCTAATTCAAGTGATAC+AGG 0.389241 6:-109875092 None:intergenic
CCAGGATTTGGTTCAACTGC+TGG 0.389889 6:+109874861 MsG0680035643.01.T01:CDS
GAGAGAGGTGTTTGCTCAGC+AGG 0.397287 6:-109874313 None:intergenic
GCTGCTCCTTGTTTGGCTGC+TGG 0.401272 6:+109874271 MsG0680035643.01.T01:CDS
CCAATGCTGCTATTTCCTCT+TGG 0.405103 6:-109874030 None:intergenic
GGCATAGTAACGTAGGATAT+TGG 0.407458 6:-109874113 None:intergenic
ATGGAACCTATTGGTGTTGT+TGG 0.410360 6:+109874202 MsG0680035643.01.T01:CDS
AGCCATGGAGAATTGTAAAT+AGG 0.411898 6:-109876541 None:intergenic
ACCAAATATGGCCTAGCAGC+AGG 0.412685 6:+109876328 MsG0680035643.01.T01:CDS
TGTTGAACTTTAGGATCAAA+AGG 0.414657 6:-109875386 None:intergenic
GCAAGAGAAGCATTTGATAA+TGG 0.419949 6:+109872763 MsG0680035643.01.T01:CDS
AGCAAAGATTATGGTGAAAT+GGG 0.429763 6:+109873988 MsG0680035643.01.T01:CDS
AACTTAGAAAGTGCCATAAC+AGG 0.431254 6:-109875885 None:intergenic
ATGTGTCCAACAACACCAAT+AGG 0.433262 6:-109874208 None:intergenic
TCTTCACATGTATACCTTGA+TGG 0.444983 6:+109874183 MsG0680035643.01.T01:CDS
CTCATCTTATACCCTCCAAA+AGG 0.454556 6:-109876451 None:intergenic
CCAAGAGGAAATAGCAGCAT+TGG 0.454749 6:+109874030 MsG0680035643.01.T01:CDS
CCAGCAGTTGAACCAAATCC+TGG 0.484916 6:-109874861 None:intergenic
GCATCATCGAAAATTAAAAC+AGG 0.485279 6:-109875122 None:intergenic
TGAGAAGAAAGTGCTTGAAA+AGG 0.490397 6:+109875340 MsG0680035643.01.T01:CDS
AGATGAAAGTTTCAAAGCCA+TGG 0.490561 6:-109876556 None:intergenic
AGCTGCAATAACCTCACATA+TGG 0.491405 6:+109874884 MsG0680035643.01.T01:CDS
AATTATATACCTTGTTGTGA+AGG 0.491939 6:-109875183 None:intergenic
GGTGCAGCCGATAAAGTTCA+TGG 0.492690 6:+109874136 MsG0680035643.01.T01:CDS
GCAGCATTGGATACAATTGA+TGG 0.494635 6:+109874043 MsG0680035643.01.T01:CDS
TTGTCACAATCCCTGCTGCT+AGG 0.495961 6:-109876339 None:intergenic
AGTACATTGAGCACTCCATC+TGG 0.505876 6:-109874837 None:intergenic
ATTAAACATGGAAAGAATGA+AGG 0.512041 6:+109875649 MsG0680035643.01.T01:CDS
GTTGAACTTTAGGATCAAAA+GGG 0.516357 6:-109875385 None:intergenic
AACAGGCCGTCGAGTAATGC+AGG 0.517213 6:+109875046 MsG0680035643.01.T01:CDS
GGTCCATGGCCACGTATGCC+TGG 0.518148 6:+109872784 MsG0680035643.01.T01:CDS
ATCTAGGCTGGTATTCCAGA+TGG 0.526428 6:+109874822 MsG0680035643.01.T01:intron
CTCCTATTTACAATTCTCCA+TGG 0.530023 6:+109876539 MsG0680035643.01.T01:CDS
TAGCAAAGAACATAACAGTT+GGG 0.536617 6:-109874246 None:intergenic
ATTCTTTCCTATATTAAACA+TGG 0.538136 6:+109875637 MsG0680035643.01.T01:CDS
ATATGGAAGAGATTATGGAT+TGG 0.550655 6:+109876477 MsG0680035643.01.T01:CDS
TATACCTTGATGGAACCTAT+TGG 0.551777 6:+109874193 MsG0680035643.01.T01:CDS
GTCTCAAGGTCAATTCGTGC+AGG 0.552820 6:+109876385 MsG0680035643.01.T01:CDS
GCACCAGGCATACGTGGCCA+TGG 0.554932 6:-109872787 None:intergenic
GGAGTGCTCAATGTACTGCC+AGG 0.556694 6:+109874843 MsG0680035643.01.T01:CDS
AATATCCTACGTTACTATGC+CGG 0.563081 6:+109874115 MsG0680035643.01.T01:CDS
AAAAGGGCAATCAATATCAA+AGG 0.565522 6:-109876434 None:intergenic
TTGTTGGACACATTATACCT+TGG 0.569907 6:+109874218 MsG0680035643.01.T01:CDS
TAAATATTGAAGGACCATTG+AGG 0.573357 6:+109876282 MsG0680035643.01.T01:intron
ATGAACTTTATCGGCTGCAC+CGG 0.573497 6:-109874134 None:intergenic
GGTAAGCAAGTGGGAAACAA+AGG 0.576032 6:+109875691 MsG0680035643.01.T01:CDS
TTAGCAAAGAACATAACAGT+TGG 0.580072 6:-109874247 None:intergenic
AGATTTGAACTTACAGCACC+AGG 0.585736 6:-109872802 None:intergenic
TTTGGAGGGTATAAGATGAG+TGG 0.586902 6:+109876454 MsG0680035643.01.T01:CDS
TCATCTTATACCCTCCAAAA+GGG 0.587155 6:-109876450 None:intergenic
AAGGAGCCACATTATTAACT+GGG 0.587465 6:+109875668 MsG0680035643.01.T01:CDS
ATAACAGTTGGGAAATTCCA+AGG 0.594259 6:-109874235 None:intergenic
CCAAATATGGCCTAGCAGCA+GGG 0.595334 6:+109876329 MsG0680035643.01.T01:CDS
ATGGAGGGAAACTATACAGT+TGG 0.597500 6:+109874062 MsG0680035643.01.T01:CDS
ATTTGGAATCCTTCACAACA+AGG 0.600817 6:+109875174 MsG0680035643.01.T01:CDS
GTAGAAATATACCGTAACAT+TGG 0.602026 6:-109875740 None:intergenic
CCTGTATCACTTGAATTAGG+AGG 0.611734 6:+109875092 MsG0680035643.01.T01:CDS
TATTGAAGGACCATTGAGGA+AGG 0.617304 6:+109876286 MsG0680035643.01.T01:intron
AACACCAATAGGTTCCATCA+AGG 0.617496 6:-109874197 None:intergenic
CATTGAGGAAGGAATTAAGA+AGG 0.621050 6:+109876297 MsG0680035643.01.T01:CDS
TGCATCAATGTCCATATGTG+AGG 0.622090 6:-109874895 None:intergenic
AAGCATTTGATAATGGTCCA+TGG 0.623184 6:+109872770 MsG0680035643.01.T01:CDS
CTTACAGCACCAGGCATACG+TGG 0.623863 6:-109872793 None:intergenic
CTGCAGCCTGCATTACTCGA+CGG 0.627078 6:-109875052 None:intergenic
GCATTGGATACAATTGATGG+AGG 0.635584 6:+109874046 MsG0680035643.01.T01:CDS
GTACAACCAGCAGCCAAACA+AGG 0.643727 6:-109874277 None:intergenic
CATTGGATACAATTGATGGA+GGG 0.663451 6:+109874047 MsG0680035643.01.T01:CDS
TTTGATCCTAAAGTTCAACA+AGG 0.667873 6:+109875389 MsG0680035643.01.T01:CDS
ATATTGCAAATACAGTCTCA+AGG 0.673016 6:+109876371 MsG0680035643.01.T01:CDS
CCTAATTGAGCAGAACCAAG+AGG 0.679930 6:+109874015 MsG0680035643.01.T01:CDS
CTGCACCGGCATAGTAACGT+AGG 0.699221 6:-109874120 None:intergenic
AGGAGCCACATTATTAACTG+GGG 0.700677 6:+109875669 MsG0680035643.01.T01:CDS
GGAGCCACATTATTAACTGG+GGG 0.710041 6:+109875670 MsG0680035643.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAAATATTATAGAAAATTG+CGG + Chr6:109875985-109876004 MsG0680035643.01.T01:intron 10.0%
!! TTATTTATAAATGTAATCAA+AGG - Chr6:109873090-109873109 None:intergenic 10.0%
!!! TTTTTTGTTGAAATAAAAAA+AGG + Chr6:109872646-109872665 MsG0680035643.01.T01:CDS 10.0%
!! AAAAAATAAAGTGAATATTG+AGG + Chr6:109873635-109873654 MsG0680035643.01.T01:intron 15.0%
!! AAAAGTTTAAAAGTAGAAAT+AGG - Chr6:109874735-109874754 None:intergenic 15.0%
!! AATGTTGAATTAAATATTGA+AGG + Chr6:109876272-109876291 MsG0680035643.01.T01:intron 15.0%
!! ATATTTCATAAATTATTGCA+AGG + Chr6:109873492-109873511 MsG0680035643.01.T01:intron 15.0%
!! ATTTGAACAATAAATTTGAA+TGG - Chr6:109873037-109873056 None:intergenic 15.0%
!! CAATATTTAATTCAACATTT+AGG - Chr6:109876271-109876290 None:intergenic 15.0%
!!! AATTTTTTGAAAATTTGTGT+AGG + Chr6:109875827-109875846 MsG0680035643.01.T01:intron 15.0%
!!! ATCTTTTAAAACTAAGTTTA+GGG - Chr6:109876233-109876252 None:intergenic 15.0%
!!! ATTTTCTTAAATTGAACATA+TGG - Chr6:109874708-109874727 None:intergenic 15.0%
!!! TATCTTTTAAAACTAAGTTT+AGG - Chr6:109876234-109876253 None:intergenic 15.0%
!! ATTCTTTCCATGTTTAATAT+AGG - Chr6:109875647-109875666 None:intergenic 20.0%
!! ATTCTTTCCTATATTAAACA+TGG + Chr6:109875637-109875656 MsG0680035643.01.T01:CDS 20.0%
!! ATTTGACATCATATTAAGAT+TGG - Chr6:109874579-109874598 None:intergenic 20.0%
!! TAAGGAATGTATAAAATAAG+TGG + Chr6:109873673-109873692 MsG0680035643.01.T01:intron 20.0%
!! TATTAAATAACTGATGTATC+TGG + Chr6:109873128-109873147 MsG0680035643.01.T01:intron 20.0%
!! TTAAAGAAAATTTATCGAGT+TGG + Chr6:109874373-109874392 MsG0680035643.01.T01:intron 20.0%
!! TTCACAAAATAATTTCATGT+GGG + Chr6:109873268-109873287 MsG0680035643.01.T01:intron 20.0%
!! TTGTAAAATTGTCATTGTTA+AGG - Chr6:109873355-109873374 None:intergenic 20.0%
!! TTTCACAAAATAATTTCATG+TGG + Chr6:109873267-109873286 MsG0680035643.01.T01:intron 20.0%
!!! ACATATTTTCATACATGTAT+TGG - Chr6:109874683-109874702 None:intergenic 20.0%
!!! GAATTGATTTTTGACATTTT+TGG + Chr6:109872933-109872952 MsG0680035643.01.T01:intron 20.0%
!!! TAATACTTTTTTTCCAACAT+TGG + Chr6:109872859-109872878 MsG0680035643.01.T01:intron 20.0%
!!! TACTATTTTTACCAATGTTA+CGG + Chr6:109875729-109875748 MsG0680035643.01.T01:CDS 20.0%
!!! TGTTACACAAACTTTAAAAT+AGG - Chr6:109872831-109872850 None:intergenic 20.0%
! AAAATTGTCATTGTTAAGGT+TGG - Chr6:109873351-109873370 None:intergenic 25.0%
! AGGAAGACAAAAAATATGTA+AGG + Chr6:109873655-109873674 MsG0680035643.01.T01:intron 25.0%
! ATAGCACAAGATGAAATATT+TGG + Chr6:109875861-109875880 MsG0680035643.01.T01:CDS 25.0%
! ATATAATCCGAAATGTTGTA+AGG + Chr6:109873821-109873840 MsG0680035643.01.T01:intron 25.0%
! ATTAAACATGGAAAGAATGA+AGG + Chr6:109875649-109875668 MsG0680035643.01.T01:CDS 25.0%
! CATTACATTTCACAAAAACT+AGG + Chr6:109874966-109874985 MsG0680035643.01.T01:intron 25.0%
! GAAATTCAAATCAAGCAATT+TGG + Chr6:109874474-109874493 MsG0680035643.01.T01:intron 25.0%
! GCTTTATAATTAGAATCAGA+AGG + Chr6:109875543-109875562 MsG0680035643.01.T01:intron 25.0%
! GTAACATTGGTAAAAATAGT+AGG - Chr6:109875730-109875749 None:intergenic 25.0%
! GTTTAAAAAAAGTTTGTGAC+CGG - Chr6:109876211-109876230 None:intergenic 25.0%
! TAAGAGATTGAGTTTATGTT+AGG + Chr6:109873302-109873321 MsG0680035643.01.T01:intron 25.0%
! TGAGTTTATGTTAGGAATTA+CGG + Chr6:109873310-109873329 MsG0680035643.01.T01:intron 25.0%
! TGTGTAACACATTTACAATA+AGG - Chr6:109875460-109875479 None:intergenic 25.0%
!! AATTATATACCTTGTTGTGA+AGG - Chr6:109875186-109875205 None:intergenic 25.0%
!! AATTGCTTGATTTGAATTTC+CGG - Chr6:109874474-109874493 None:intergenic 25.0%
!! AGTAACTCTTTGTAATTTTC+AGG + Chr6:109875259-109875278 MsG0680035643.01.T01:intron 25.0%
!! ATTTAAAACCATGTCTAAGA+TGG - Chr6:109875941-109875960 None:intergenic 25.0%
!! CAACATGCATTAATTTGATA+TGG + Chr6:109873942-109873961 MsG0680035643.01.T01:intron 25.0%
!! GGTATATAATTTTACCTTCA+AGG + Chr6:109875195-109875214 MsG0680035643.01.T01:intron 25.0%
!! GTAACTCTTTGTAATTTTCA+GGG + Chr6:109875260-109875279 MsG0680035643.01.T01:intron 25.0%
!! TTCAAAAAATTTTTACGCCA+TGG + Chr6:109874928-109874947 MsG0680035643.01.T01:intron 25.0%
!! TTTTCTTATGCACTCTTAAA+GGG - Chr6:109873613-109873632 None:intergenic 25.0%
!!! ACATATGGTTTCATTTTTCT+TGG - Chr6:109875770-109875789 None:intergenic 25.0%
!!! ATCATTGATTTGAGATTAGA+TGG - Chr6:109875497-109875516 None:intergenic 25.0%
!!! GGATTTTAAAATCCGAAAAA+TGG + Chr6:109873754-109873773 MsG0680035643.01.T01:intron 25.0%
!!! GGATTTTAAAATCCGAAATA+GGG - Chr6:109873748-109873767 None:intergenic 25.0%
!!! TTGACATTTTTGGTTGTTAT+CGG + Chr6:109872943-109872962 MsG0680035643.01.T01:intron 25.0%
AAAAATGGAGAGTTTATGGA+GGG + Chr6:109873769-109873788 MsG0680035643.01.T01:intron 30.0%
AAAAGGGCAATCAATATCAA+AGG - Chr6:109876437-109876456 None:intergenic 30.0%
AACTCAATCTCTTATAGAAG+TGG - Chr6:109873296-109873315 None:intergenic 30.0%
AACTGTTATGTTCTTTGCTA+AGG + Chr6:109874249-109874268 MsG0680035643.01.T01:CDS 30.0%
AAGGTGATCACAATAAAAGA+GGG + Chr6:109873571-109873590 MsG0680035643.01.T01:intron 30.0%
ACATTAGATACCAAGGATTA+GGG - Chr6:109874635-109874654 None:intergenic 30.0%
ACTCAATCTCTTATAGAAGT+GGG - Chr6:109873295-109873314 None:intergenic 30.0%
AGACAAGCCTTCAATATAAA+GGG + Chr6:109876152-109876171 MsG0680035643.01.T01:intron 30.0%
AGATCAAATCTACTCGAAAA+CGG - Chr6:109873378-109873397 None:intergenic 30.0%
AGCAAAGATTATGGTGAAAT+GGG + Chr6:109873988-109874007 MsG0680035643.01.T01:CDS 30.0%
AGCAATATCAACATCTTCTT+TGG - Chr6:109872734-109872753 None:intergenic 30.0%
AGCGTAAAAAAACGAATTTG+TGG + Chr6:109873409-109873428 MsG0680035643.01.T01:intron 30.0%
ATATGGAAGAGATTATGGAT+TGG + Chr6:109876477-109876496 MsG0680035643.01.T01:CDS 30.0%
ATATTGCAAATACAGTCTCA+AGG + Chr6:109876371-109876390 MsG0680035643.01.T01:CDS 30.0%
ATGCCTTCAATATAAAGTGT+CGG - Chr6:109876054-109876073 None:intergenic 30.0%
ATTGCTTATAATGTCACAAG+AGG + Chr6:109873202-109873221 MsG0680035643.01.T01:intron 30.0%
CATAAACACATTAGATACCA+AGG - Chr6:109874642-109874661 None:intergenic 30.0%
CATATTAGTATCCTTACTTG+GGG - Chr6:109875416-109875435 None:intergenic 30.0%
GCATATTAGTATCCTTACTT+GGG - Chr6:109875417-109875436 None:intergenic 30.0%
GCATCATCGAAAATTAAAAC+AGG - Chr6:109875125-109875144 None:intergenic 30.0%
GTAGAAATATACCGTAACAT+TGG - Chr6:109875743-109875762 None:intergenic 30.0%
TAAATATTGAAGGACCATTG+AGG + Chr6:109876282-109876301 MsG0680035643.01.T01:intron 30.0%
TACAATATTGTGTGTGTTGT+CGG - Chr6:109876086-109876105 None:intergenic 30.0%
TAGCAAAGAACATAACAGTT+GGG - Chr6:109874249-109874268 None:intergenic 30.0%
TATATGAGTAGTCATCTAGT+TGG + Chr6:109873539-109873558 MsG0680035643.01.T01:intron 30.0%
TCAGTTATGAGAATGACATA+TGG - Chr6:109875785-109875804 None:intergenic 30.0%
TGAAATATTTGGACCTGTTA+TGG + Chr6:109875872-109875891 MsG0680035643.01.T01:CDS 30.0%
TGCATATTAGTATCCTTACT+TGG - Chr6:109875418-109875437 None:intergenic 30.0%
TTAGCAAAGAACATAACAGT+TGG - Chr6:109874250-109874269 None:intergenic 30.0%
TTCGGATTATATAACTCGAA+AGG - Chr6:109873813-109873832 None:intergenic 30.0%
TTGCTTATAATGTCACAAGA+GGG + Chr6:109873203-109873222 MsG0680035643.01.T01:intron 30.0%
TTTGATCCTAAAGTTCAACA+AGG + Chr6:109875389-109875408 MsG0680035643.01.T01:CDS 30.0%
! AACGAATTTGTGGATTTTCT+TGG + Chr6:109873419-109873438 MsG0680035643.01.T01:intron 30.0%
! ATTTTCTTTGCAGACTAGTA+AGG + Chr6:109875600-109875619 MsG0680035643.01.T01:intron 30.0%
! CTTTTCTTATGCACTCTTAA+AGG - Chr6:109873614-109873633 None:intergenic 30.0%
! TGACAACTACTAATTTTTGC+TGG + Chr6:109874992-109875011 MsG0680035643.01.T01:intron 30.0%
! TGCATCTTTAACTTAATCCA+TGG - Chr6:109874948-109874967 None:intergenic 30.0%
! TGTTACAAGATTTTCCTTGA+AGG - Chr6:109875212-109875231 None:intergenic 30.0%
! TTGAATCCGATTTTCAAAGT+CGG + Chr6:109874541-109874560 MsG0680035643.01.T01:intron 30.0%
! TTTCTTTCTCCTTTTCATCT+AGG + Chr6:109874806-109874825 MsG0680035643.01.T01:intron 30.0%
!! GTTGAACTTTAGGATCAAAA+GGG - Chr6:109875388-109875407 None:intergenic 30.0%
!! TCCATAAACTCTCCATTTTT+CGG - Chr6:109873769-109873788 None:intergenic 30.0%
!! TGTTGAACTTTAGGATCAAA+AGG - Chr6:109875389-109875408 None:intergenic 30.0%
!! TTTGATATTGATTGCCCTTT+TGG + Chr6:109876436-109876455 MsG0680035643.01.T01:CDS 30.0%
!!! CGGATTTTAAAATCCGAAAT+AGG - Chr6:109873749-109873768 None:intergenic 30.0%
!!! CTAATTTTTGCTGGTTTTAC+AGG + Chr6:109875001-109875020 MsG0680035643.01.T01:intron 30.0%
!!! TTTTTTTGCTCATCTTGCTA+AGG + Chr6:109874342-109874361 MsG0680035643.01.T01:CDS 30.0%
AACCAAACATACACCAATGT+TGG - Chr6:109872875-109872894 None:intergenic 35.0%
AAGCCTGTATCACTTGAATT+AGG + Chr6:109875089-109875108 MsG0680035643.01.T01:CDS 35.0%
AAGCCTTCAATATAAAGGGT+CGG + Chr6:109876156-109876175 MsG0680035643.01.T01:intron 35.0%
AAGGAGCCACATTATTAACT+GGG + Chr6:109875668-109875687 MsG0680035643.01.T01:CDS 35.0%
AAGGCCAACAATACCAAATA+TGG + Chr6:109876316-109876335 MsG0680035643.01.T01:CDS 35.0%
AATATCCTACGTTACTATGC+CGG + Chr6:109874115-109874134 MsG0680035643.01.T01:CDS 35.0%
ACAATATTGTGTGTGTTGTC+GGG - Chr6:109876085-109876104 None:intergenic 35.0%
AGCCATGGAGAATTGTAAAT+AGG - Chr6:109876544-109876563 None:intergenic 35.0%
AGGGATTGTGACAAAGAATT+TGG + Chr6:109876348-109876367 MsG0680035643.01.T01:CDS 35.0%
AGTGGATATGGAAGAGATTA+TGG + Chr6:109876472-109876491 MsG0680035643.01.T01:CDS 35.0%
ATAACAGTTGGGAAATTCCA+AGG - Chr6:109874238-109874257 None:intergenic 35.0%
ATAGGAGAGAGCAAAGATTA+TGG + Chr6:109873979-109873998 MsG0680035643.01.T01:intron 35.0%
ATGGTCATGAACTGTTTGAT+AGG + Chr6:109873961-109873980 MsG0680035643.01.T01:intron 35.0%
ATTCATCGTAAATCCCTTCT+TGG - Chr6:109875319-109875338 None:intergenic 35.0%
CAAGGTGATCACAATAAAAG+AGG + Chr6:109873570-109873589 MsG0680035643.01.T01:intron 35.0%
CACATTAGATACCAAGGATT+AGG - Chr6:109874636-109874655 None:intergenic 35.0%
CACTTCTCCATGAACTTTAT+CGG - Chr6:109874146-109874165 None:intergenic 35.0%
CAGACAAGCCTTCAATATAA+AGG + Chr6:109876151-109876170 MsG0680035643.01.T01:intron 35.0%
CATTGAGGAAGGAATTAAGA+AGG + Chr6:109876297-109876316 MsG0680035643.01.T01:CDS 35.0%
CATTGGATACAATTGATGGA+GGG + Chr6:109874047-109874066 MsG0680035643.01.T01:CDS 35.0%
CTCCTATTTACAATTCTCCA+TGG + Chr6:109876539-109876558 MsG0680035643.01.T01:CDS 35.0%
CTTAGCAAATGTTCTCAACT+AGG + Chr6:109873916-109873935 MsG0680035643.01.T01:intron 35.0%
CTTCTTAATTCCTTCCTCAA+TGG - Chr6:109876299-109876318 None:intergenic 35.0%
GAAAAATGGAGAGTTTATGG+AGG + Chr6:109873768-109873787 MsG0680035643.01.T01:intron 35.0%
GAGCAAAGATTATGGTGAAA+TGG + Chr6:109873987-109874006 MsG0680035643.01.T01:CDS 35.0%
GCAAAAAAAAGTGATGAGAG+AGG - Chr6:109874331-109874350 None:intergenic 35.0%
GCTTGAAAAGGCGAAAAATT+GGG + Chr6:109875352-109875371 MsG0680035643.01.T01:CDS 35.0%
GTAATCACTTCTTCTGTTCT+TGG - Chr6:109872694-109872713 None:intergenic 35.0%
TAGGCCATATTTGGTATTGT+TGG - Chr6:109876323-109876342 None:intergenic 35.0%
TATACCTTGATGGAACCTAT+TGG + Chr6:109874193-109874212 MsG0680035643.01.T01:CDS 35.0%
TCATCTTATACCCTCCAAAA+GGG - Chr6:109876453-109876472 None:intergenic 35.0%
TCCGAAAAATGGAGAGTTTA+TGG + Chr6:109873765-109873784 MsG0680035643.01.T01:intron 35.0%
TCGGATTCAAAATACCAAGT+CGG - Chr6:109874531-109874550 None:intergenic 35.0%
TCTTCACATGTATACCTTGA+TGG + Chr6:109874183-109874202 MsG0680035643.01.T01:CDS 35.0%
TGCTTGAAAAGGCGAAAAAT+TGG + Chr6:109875351-109875370 MsG0680035643.01.T01:CDS 35.0%
TGGACATTGATGCAGTAATT+TGG + Chr6:109874904-109874923 MsG0680035643.01.T01:intron 35.0%
TTAGGAATTACGGTGAGTAT+TGG + Chr6:109873320-109873339 MsG0680035643.01.T01:intron 35.0%
TTCCAACATTGGTGTATGTT+TGG + Chr6:109872870-109872889 MsG0680035643.01.T01:intron 35.0%
TTGTTGGACACATTATACCT+TGG + Chr6:109874218-109874237 MsG0680035643.01.T01:CDS 35.0%
TTTACAGGTTCAACTGAAAC+AGG + Chr6:109875029-109875048 MsG0680035643.01.T01:CDS 35.0%
! ATTTGGAATCCTTCACAACA+AGG + Chr6:109875174-109875193 MsG0680035643.01.T01:CDS 35.0%
! CACTTTCCGACTTTGAAAAT+CGG - Chr6:109874550-109874569 None:intergenic 35.0%
! CTAGATGTTTTGTCCAAGAA+GGG + Chr6:109875303-109875322 MsG0680035643.01.T01:intron 35.0%
! CTCTTTTATTGTGATCACCT+TGG - Chr6:109873572-109873591 None:intergenic 35.0%
! GTTTTACAGGTCAGTTTTAC+AGG + Chr6:109875014-109875033 MsG0680035643.01.T01:intron 35.0%
! TCTAGATGTTTTGTCCAAGA+AGG + Chr6:109875302-109875321 MsG0680035643.01.T01:intron 35.0%
! TGTGCAAATGAGAAGTATGT+TGG - Chr6:109875578-109875597 None:intergenic 35.0%
!! AACTTAGAAAGTGCCATAAC+AGG - Chr6:109875888-109875907 None:intergenic 35.0%
!! AAGCATTTGATAATGGTCCA+TGG + Chr6:109872770-109872789 MsG0680035643.01.T01:CDS 35.0%
!! ATATTGATTGCCCTTTTGGA+GGG + Chr6:109876440-109876459 MsG0680035643.01.T01:CDS 35.0%
!! GAGAAGTGTTCAAAACTTCT+AGG + Chr6:109874158-109874177 MsG0680035643.01.T01:CDS 35.0%
!! GCAAGAGAAGCATTTGATAA+TGG + Chr6:109872763-109872782 MsG0680035643.01.T01:CDS 35.0%
!! TGAGAAGAAAGTGCTTGAAA+AGG + Chr6:109875340-109875359 MsG0680035643.01.T01:CDS 35.0%
!! TTTGGTAGCTTCTGCTATTT+TGG - Chr6:109872716-109872735 None:intergenic 35.0%
!!! ATTCGTTTTTTTACGCTTCG+AGG - Chr6:109873406-109873425 None:intergenic 35.0%
!!! TTCGTTTTTTTACGCTTCGA+GGG - Chr6:109873405-109873424 None:intergenic 35.0%
AACACCAATAGGTTCCATCA+AGG - Chr6:109874200-109874219 None:intergenic 40.0%
ACCTCACACGCTATGAATTA+AGG - Chr6:109874421-109874440 None:intergenic 40.0%
ACTTCTTAGGCACCCTATTT+CGG + Chr6:109873733-109873752 MsG0680035643.01.T01:intron 40.0%
AGATTTGAACTTACAGCACC+AGG - Chr6:109872805-109872824 None:intergenic 40.0%
AGCTGCAATAACCTCACATA+TGG + Chr6:109874884-109874903 MsG0680035643.01.T01:CDS 40.0%
AGGAGCCACATTATTAACTG+GGG + Chr6:109875669-109875688 MsG0680035643.01.T01:CDS 40.0%
ATGGAGGGAAACTATACAGT+TGG + Chr6:109874062-109874081 MsG0680035643.01.T01:CDS 40.0%
ATGTGTCCAACAACACCAAT+AGG - Chr6:109874211-109874230 None:intergenic 40.0%
CAATTCGTGCAGGTATCATT+TGG + Chr6:109876395-109876414 MsG0680035643.01.T01:CDS 40.0%
CCACCGACACTTTATATTGA+AGG + Chr6:109876048-109876067 MsG0680035643.01.T01:intron 40.0%
CCTCCTAATTCAAGTGATAC+AGG - Chr6:109875095-109875114 None:intergenic 40.0%
CCTGTATCACTTGAATTAGG+AGG + Chr6:109875092-109875111 MsG0680035643.01.T01:CDS 40.0%
CTCATCTTATACCCTCCAAA+AGG - Chr6:109876454-109876473 None:intergenic 40.0%
CTTACCCCCAGTTAATAATG+TGG - Chr6:109875677-109875696 None:intergenic 40.0%
GAAGGAGCCACATTATTAAC+TGG + Chr6:109875667-109875686 MsG0680035643.01.T01:CDS 40.0%
GAATACCAGCCTAGATGAAA+AGG - Chr6:109874818-109874837 None:intergenic 40.0%
GCATTGGATACAATTGATGG+AGG + Chr6:109874046-109874065 MsG0680035643.01.T01:CDS 40.0%
GCTGTTGATCTTGCTCTATT+TGG + Chr6:109875157-109875176 MsG0680035643.01.T01:CDS 40.0%
GGCATAGTAACGTAGGATAT+TGG - Chr6:109874116-109874135 None:intergenic 40.0%
GGGTATAAGATGAGTGGATA+TGG + Chr6:109876460-109876479 MsG0680035643.01.T01:CDS 40.0%
TATTGAAGGACCATTGAGGA+AGG + Chr6:109876286-109876305 MsG0680035643.01.T01:intron 40.0%
TCCTTAATTCATAGCGTGTG+AGG + Chr6:109874417-109874436 MsG0680035643.01.T01:intron 40.0%
TGACCGACCCTTTATATTGA+AGG - Chr6:109876162-109876181 None:intergenic 40.0%
TGCATCAATGTCCATATGTG+AGG - Chr6:109874898-109874917 None:intergenic 40.0%
TTGGACTGTCCAATCAAGTT+AGG + Chr6:109874493-109874512 MsG0680035643.01.T01:intron 40.0%
! AATAGGGTGCCTAAGAAGTT+TGG - Chr6:109873732-109873751 None:intergenic 40.0%
! CGAAAGGTGTAAAAACGTTC+AGG - Chr6:109873797-109873816 None:intergenic 40.0%
! GCAGCATTGGATACAATTGA+TGG + Chr6:109874043-109874062 MsG0680035643.01.T01:CDS 40.0%
! TTTCTCCTTTTCATCTAGGC+TGG + Chr6:109874810-109874829 MsG0680035643.01.T01:intron 40.0%
! TTTGGAGGGTATAAGATGAG+TGG + Chr6:109876454-109876473 MsG0680035643.01.T01:CDS 40.0%
! TTTTGCTCATCTTGCTAAGG+AGG + Chr6:109874345-109874364 MsG0680035643.01.T01:CDS 40.0%
!! ATGGAACCTATTGGTGTTGT+TGG + Chr6:109874202-109874221 MsG0680035643.01.T01:CDS 40.0%
!! CCTTCAATATAAAGTGTCGG+TGG - Chr6:109876051-109876070 None:intergenic 40.0%
!! CTCTTGGTTCTGCTCAATTA+GGG - Chr6:109874017-109874036 None:intergenic 40.0%
!! GATATTGATTGCCCTTTTGG+AGG + Chr6:109876439-109876458 MsG0680035643.01.T01:CDS 40.0%
!!! ATCTAGTTGGCTTTTGTCCA+AGG + Chr6:109873552-109873571 MsG0680035643.01.T01:intron 40.0%
!!! GATTTTGATTCGTTGCTGAC+CGG + Chr6:109874452-109874471 MsG0680035643.01.T01:intron 40.0%
AAGGCGAAAAATTGGGTCGT+TGG + Chr6:109875359-109875378 MsG0680035643.01.T01:CDS 45.0%
AGTACATTGAGCACTCCATC+TGG - Chr6:109874840-109874859 None:intergenic 45.0%
ATCTAGGCTGGTATTCCAGA+TGG + Chr6:109874822-109874841 MsG0680035643.01.T01:intron 45.0%
ATTAACTGGGGGTAAGCAAG+TGG + Chr6:109875681-109875700 MsG0680035643.01.T01:CDS 45.0%
CCAAGAGGAAATAGCAGCAT+TGG + Chr6:109874030-109874049 MsG0680035643.01.T01:CDS 45.0%
CCTAATTGAGCAGAACCAAG+AGG + Chr6:109874015-109874034 MsG0680035643.01.T01:CDS 45.0%
CGATGTTGTGGCTCAAATTC+CGG + Chr6:109876189-109876208 MsG0680035643.01.T01:intron 45.0%
CTCAATGTACTGCCAGGATT+TGG + Chr6:109874849-109874868 MsG0680035643.01.T01:CDS 45.0%
CTCATCTTGCTAAGGAGGTA+AGG + Chr6:109874350-109874369 MsG0680035643.01.T01:intron 45.0%
GAATTTGAGCCACAACATCG+TGG - Chr6:109876189-109876208 None:intergenic 45.0%
GGAGCCACATTATTAACTGG+GGG + Chr6:109875670-109875689 MsG0680035643.01.T01:CDS 45.0%
GGTAAGCAAGTGGGAAACAA+AGG + Chr6:109875691-109875710 MsG0680035643.01.T01:CDS 45.0%
GGTCAATAACCACGATGTTG+TGG + Chr6:109876177-109876196 MsG0680035643.01.T01:intron 45.0%
GTGAGCTCTCCTAACTTGAT+TGG - Chr6:109874505-109874524 None:intergenic 45.0%
TGGGGTCCTTGTTGAACTTT+AGG - Chr6:109875398-109875417 None:intergenic 45.0%
TTAACTGGGGGTAAGCAAGT+GGG + Chr6:109875682-109875701 MsG0680035643.01.T01:CDS 45.0%
TTCAACAAGGACCCCAAGTA+AGG + Chr6:109875402-109875421 MsG0680035643.01.T01:intron 45.0%
TTGCGCGCCTTACAACATTT+CGG - Chr6:109873831-109873850 None:intergenic 45.0%
! ATGAACTTTATCGGCTGCAC+CGG - Chr6:109874137-109874156 None:intergenic 45.0%
! CGTTTTCGCCATCTTAGACA+TGG + Chr6:109875930-109875949 MsG0680035643.01.T01:intron 45.0%
! TTTGGCTGCTGGTTGTACTA+TGG + Chr6:109874282-109874301 MsG0680035643.01.T01:CDS 45.0%
!! CCAATGCTGCTATTTCCTCT+TGG - Chr6:109874033-109874052 None:intergenic 45.0%
!! CCTCTTGGTTCTGCTCAATT+AGG - Chr6:109874018-109874037 None:intergenic 45.0%
ACCAAATATGGCCTAGCAGC+AGG + Chr6:109876328-109876347 MsG0680035643.01.T01:CDS 50.0%
ATGATTTCCGTGACTGCAGG+GGG + Chr6:109874601-109874620 MsG0680035643.01.T01:intron 50.0%
CATGATTTCCGTGACTGCAG+GGG + Chr6:109874600-109874619 MsG0680035643.01.T01:intron 50.0%
CCAAATATGGCCTAGCAGCA+GGG + Chr6:109876329-109876348 MsG0680035643.01.T01:CDS 50.0%
CCAGCAGTTGAACCAAATCC+TGG - Chr6:109874864-109874883 None:intergenic 50.0%
GCATGATTTCCGTGACTGCA+GGG + Chr6:109874599-109874618 MsG0680035643.01.T01:intron 50.0%
GCCTAAGAAGTTTGGAGGGT+GGG - Chr6:109873724-109873743 None:intergenic 50.0%
GCGCAAGAAGCTTGAAGTGT+GGG + Chr6:109873845-109873864 MsG0680035643.01.T01:intron 50.0%
GGGATCTGAACCCTAATCCT+TGG + Chr6:109874622-109874641 MsG0680035643.01.T01:intron 50.0%
GGGTGCCTAAGAAGTTTGGA+GGG - Chr6:109873728-109873747 None:intergenic 50.0%
GGTGCAGCCGATAAAGTTCA+TGG + Chr6:109874136-109874155 MsG0680035643.01.T01:CDS 50.0%
GTACAACCAGCAGCCAAACA+AGG - Chr6:109874280-109874299 None:intergenic 50.0%
GTCTCAAGGTCAATTCGTGC+AGG + Chr6:109876385-109876404 MsG0680035643.01.T01:CDS 50.0%
GTGTTTGCTCAGCAGGCTTA+AGG - Chr6:109874309-109874328 None:intergenic 50.0%
TCCCACCCTCCAAACTTCTT+AGG + Chr6:109873720-109873739 MsG0680035643.01.T01:intron 50.0%
TGCATGATTTCCGTGACTGC+AGG + Chr6:109874598-109874617 MsG0680035643.01.T01:intron 50.0%
TGCCTAAGAAGTTTGGAGGG+TGG - Chr6:109873725-109873744 None:intergenic 50.0%
TGCTAAGGCTGCTCCTTGTT+TGG + Chr6:109874264-109874283 MsG0680035643.01.T01:CDS 50.0%
TTGTCACAATCCCTGCTGCT+AGG - Chr6:109876342-109876361 None:intergenic 50.0%
! AGGGTGCCTAAGAAGTTTGG+AGG - Chr6:109873729-109873748 None:intergenic 50.0%
! CCAGGATTTGGTTCAACTGC+TGG + Chr6:109874861-109874880 MsG0680035643.01.T01:CDS 50.0%
! CGTAGGATATTGGCTGCTTC+AGG - Chr6:109874106-109874125 None:intergenic 50.0%
AACAGGCCGTCGAGTAATGC+AGG + Chr6:109875046-109875065 MsG0680035643.01.T01:CDS 55.0%
CCCTGCTGCTAGGCCATATT+TGG - Chr6:109876332-109876351 None:intergenic 55.0%
CGCGCAAGAAGCTTGAAGTG+TGG + Chr6:109873844-109873863 MsG0680035643.01.T01:intron 55.0%
CTGCAGCCTGCATTACTCGA+CGG - Chr6:109875055-109875074 None:intergenic 55.0%
CTTACAGCACCAGGCATACG+TGG - Chr6:109872796-109872815 None:intergenic 55.0%
TGATTTCCGTGACTGCAGGG+GGG + Chr6:109874602-109874621 MsG0680035643.01.T01:intron 55.0%
! CTGCACCGGCATAGTAACGT+AGG - Chr6:109874123-109874142 None:intergenic 55.0%
! GGAGTGCTCAATGTACTGCC+AGG + Chr6:109874843-109874862 MsG0680035643.01.T01:CDS 55.0%
!! GAGAGAGGTGTTTGCTCAGC+AGG - Chr6:109874316-109874335 None:intergenic 55.0%
GCGTGTGAGGTGTATCTGCG+AGG + Chr6:109874430-109874449 MsG0680035643.01.T01:intron 60.0%
GGAGAGCTCACGTTCCGACT+TGG + Chr6:109874514-109874533 MsG0680035643.01.T01:intron 60.0%
TCAGATCCCCCCTGCAGTCA+CGG - Chr6:109874611-109874630 None:intergenic 60.0%
! GCTGCTCCTTGTTTGGCTGC+TGG + Chr6:109874271-109874290 MsG0680035643.01.T01:CDS 60.0%
GCACCAGGCATACGTGGCCA+TGG - Chr6:109872790-109872809 None:intergenic 65.0%
GGTCCATGGCCACGTATGCC+TGG + Chr6:109872784-109872803 MsG0680035643.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr6 gene 109872634 109876567 109872634 ID=MsG0680035643.01;Name=MsG0680035643.01
Chr6 mRNA 109872634 109876567 109872634 ID=MsG0680035643.01.T01;Parent=MsG0680035643.01;Name=MsG0680035643.01.T01;_AED=0.34;_eAED=0.34;_QI=0|0|0|1|1|1|8|0|469
Chr6 exon 109872634 109872810 109872634 ID=MsG0680035643.01.T01:exon:8700;Parent=MsG0680035643.01.T01
Chr6 exon 109873983 109874366 109873983 ID=MsG0680035643.01.T01:exon:8701;Parent=MsG0680035643.01.T01
Chr6 exon 109874828 109874917 109874828 ID=MsG0680035643.01.T01:exon:8702;Parent=MsG0680035643.01.T01
Chr6 exon 109875023 109875195 109875023 ID=MsG0680035643.01.T01:exon:8703;Parent=MsG0680035643.01.T01
Chr6 exon 109875307 109875418 109875307 ID=MsG0680035643.01.T01:exon:8704;Parent=MsG0680035643.01.T01
Chr6 exon 109875613 109875750 109875613 ID=MsG0680035643.01.T01:exon:8705;Parent=MsG0680035643.01.T01
Chr6 exon 109875849 109875910 109875849 ID=MsG0680035643.01.T01:exon:8706;Parent=MsG0680035643.01.T01
Chr6 exon 109876294 109876567 109876294 ID=MsG0680035643.01.T01:exon:8707;Parent=MsG0680035643.01.T01
Chr6 CDS 109872634 109872810 109872634 ID=MsG0680035643.01.T01:cds;Parent=MsG0680035643.01.T01
Chr6 CDS 109873983 109874366 109873983 ID=MsG0680035643.01.T01:cds;Parent=MsG0680035643.01.T01
Chr6 CDS 109874828 109874917 109874828 ID=MsG0680035643.01.T01:cds;Parent=MsG0680035643.01.T01
Chr6 CDS 109875023 109875195 109875023 ID=MsG0680035643.01.T01:cds;Parent=MsG0680035643.01.T01
Chr6 CDS 109875307 109875418 109875307 ID=MsG0680035643.01.T01:cds;Parent=MsG0680035643.01.T01
Chr6 CDS 109875613 109875750 109875613 ID=MsG0680035643.01.T01:cds;Parent=MsG0680035643.01.T01
Chr6 CDS 109875849 109875910 109875849 ID=MsG0680035643.01.T01:cds;Parent=MsG0680035643.01.T01
Chr6 CDS 109876294 109876567 109876294 ID=MsG0680035643.01.T01:cds;Parent=MsG0680035643.01.T01
Gene Sequence

>MsG0680035643.01.T01

ATGCATATTGGATTTTTTGTTGAAATAAAAAAAGGAAAAACTTTTGAGACTGTTGATCCAAGAACAGAAGAAGTGATTACCAAAATAGCAGAAGCTACCAAAGAAGATGTTGATATTGCTGTGAAAGCTGCAAGAGAAGCATTTGATAATGGTCCATGGCCACGTATGCCTGGTGCTGAGAGAGCAAAGATTATGGTGAAATGGGCAACCCTAATTGAGCAGAACCAAGAGGAAATAGCAGCATTGGATACAATTGATGGAGGGAAACTATACAGTTGGTGTAAGACAATAGATGTACCTGAAGCAGCCAATATCCTACGTTACTATGCCGGTGCAGCCGATAAAGTTCATGGAGAAGTGTTCAAAACTTCTAGGAATCTTCACATGTATACCTTGATGGAACCTATTGGTGTTGTTGGACACATTATACCTTGGAATTTCCCAACTGTTATGTTCTTTGCTAAGGCTGCTCCTTGTTTGGCTGCTGGTTGTACTATGGTCCTTAAGCCTGCTGAGCAAACACCTCTCTCATCACTTTTTTTTGCTCATCTTGCTAAGGAGGCTGGTATTCCAGATGGAGTGCTCAATGTACTGCCAGGATTTGGTTCAACTGCTGGAGCTGCAATAACCTCACATATGGACATTGATGCAGTCAGTTTTACAGGTTCAACTGAAACAGGCCGTCGAGTAATGCAGGCTGCAGCAATGAGCAATTTGAAGCCTGTATCACTTGAATTAGGAGGCAAGTCGCCTGTTTTAATTTTCGATGATGCTGATGTTGATAAGCTGTTGATCTTGCTCTATTTGGAATCCTTCACAACAAGATGTTTTGTCCAAGAAGGGATTTACGATGAATTTGAGAAGAAAGTGCTTGAAAAGGCGAAAAATTGGGTCGTTGGTGACCCTTTTGATCCTAAAGTTCAACAAGGACCCCAAACTAGTAAGGCGCAATTTGATAAAATTCTTTCCTATATTAAACATGGAAAGAATGAAGGAGCCACATTATTAACTGGGGGTAAGCAAGTGGGAAACAAAGGATACTACATCGAGCCTACTATTTTTACCAATGTTACGGATGACATGTTAATAGCACAAGATGAAATATTTGGACCTGTTATGGCACTTTCTAAGTTCAAGACCATTGAGGAAGGAATTAAGAAGGCCAACAATACCAAATATGGCCTAGCAGCAGGGATTGTGACAAAGAATTTGGATATTGCAAATACAGTCTCAAGGTCAATTCGTGCAGGTATCATTTGGATCAATTGCTATTTTGCCTTTGATATTGATTGCCCTTTTGGAGGGTATAAGATGAGTGGATATGGAAGAGATTATGGATTGGAAGCACTTCACAAGTATCTTCAAGTTAAATCTGTTGCAACTCCTATTTACAATTCTCCATGGCTTTGA
Protein sequence

>MsG0680035643.01.T01

MHIGFFVEIKKGKTFETVDPRTEEVITKIAEATKEDVDIAVKAAREAFDNGPWPRMPGAERAKIMVKWATLIEQNQEEIAALDTIDGGKLYSWCKTIDVPEAANILRYYAGAADKVHGEVFKTSRNLHMYTLMEPIGVVGHIIPWNFPTVMFFAKAAPCLAAGCTMVLKPAEQTPLSSLFFAHLAKEAGIPDGVLNVLPGFGSTAGAAITSHMDIDAVSFTGSTETGRRVMQAAAMSNLKPVSLELGGKSPVLIFDDADVDKLLILLYLESFTTRCFVQEGIYDEFEKKVLEKAKNWVVGDPFDPKVQQGPQTSKAQFDKILSYIKHGKNEGATLLTGGKQVGNKGYYIEPTIFTNVTDDMLIAQDEIFGPVMALSKFKTIEEGIKKANNTKYGLAAGIVTKNLDIANTVSRSIRAGIIWINCYFAFDIDCPFGGYKMSGYGRDYGLEALHKYLQVKSVATPIYNSPWL*