AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780036024.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780036024.01.T01 MTR_7g025530 69.355 124 32 3 131 248 542 665 1.25e-42 154
MsG0780036024.01.T01 MTR_7g025580 65.649 131 39 3 124 248 542 672 4.63e-42 152
MsG0780036024.01.T01 MTR_5g034890 49.697 165 64 6 97 245 394 555 4.55e-37 137
MsG0780036024.01.T01 MTR_4g133410 58.065 124 50 2 130 251 263 386 5.41e-35 129
MsG0780036024.01.T01 MTR_4g133410 58.065 124 50 2 130 251 397 520 2.77e-34 129
MsG0780036024.01.T01 MTR_7g025525 63.542 96 30 2 158 248 8 103 1.09e-30 110
MsG0780036024.01.T01 MTR_4g081220 62.887 97 36 0 130 226 708 804 1.42e-30 120
MsG0780036024.01.T01 MTR_7g007510 43.651 126 63 4 98 216 543 667 6.20e-12 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780036024.01.T01 AT4G21880 35.897 117 75 0 125 241 660 776 4.76e-17 80.9
MsG0780036024.01.T01 AT4G21880 35.897 117 75 0 125 241 704 820 5.01e-17 80.5
MsG0780036024.01.T01 AT4G04790 39.216 102 62 0 125 226 684 785 9.36e-17 79.7
MsG0780036024.01.T01 AT4G04790 39.216 102 62 0 125 226 547 648 9.47e-17 79.7
MsG0780036024.01.T01 AT4G04790 39.216 102 62 0 125 226 680 781 1.04e-16 79.7

Find 198 sgRNAs with CRISPR-Local

Find 439 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCACTGCACTTGGACATTT+TGG 0.117998 7:-1464854 None:intergenic
CACTATTTACTTTAAGTAAT+TGG 0.119089 7:+1462517 MsG0780036024.01.T01:five_prime_UTR
TCCTAATGATTGAATATATT+TGG 0.156393 7:-1464673 None:intergenic
TTATCCTTATGGGATTATTT+TGG 0.165373 7:+1468593 MsG0780036024.01.T01:three_prime_UTR
CTAACCCAACCTTACAAAAT+TGG 0.166119 7:+1463370 MsG0780036024.01.T01:five_prime_UTR
CTATGGTTTATGAATAAAAT+TGG 0.184391 7:+1463606 MsG0780036024.01.T01:five_prime_UTR
AGATTTGAACAATGCTAATT+TGG 0.214433 7:+1468110 MsG0780036024.01.T01:CDS
TTTAGGCTCTTTATCCTTAT+GGG 0.219688 7:+1468583 MsG0780036024.01.T01:three_prime_UTR
TAAGTTCGTCACCTCTAATT+TGG 0.221138 7:-1464925 None:intergenic
TTATGAATAAAATTGGAATT+AGG 0.225756 7:+1463613 MsG0780036024.01.T01:five_prime_UTR
AAGAGAAATGGAAGATTTAC+TGG 0.228366 7:+1466449 MsG0780036024.01.T01:CDS
GGGTCCACACATTTGCAATT+TGG 0.242362 7:+1467994 MsG0780036024.01.T01:CDS
ATGATAAATATTAGAAATTA+AGG 0.249513 7:+1463067 MsG0780036024.01.T01:five_prime_UTR
GGTGGGCTTGATAGGTATTA+TGG 0.266875 7:+1463453 MsG0780036024.01.T01:five_prime_UTR
TACTATAAAATTTAATTGTT+CGG 0.276431 7:-1467800 None:intergenic
ATATTTGGCTTTGTAGCATT+TGG 0.283715 7:+1462810 MsG0780036024.01.T01:five_prime_UTR
ACTATAAAATTTAATTGTTC+GGG 0.286017 7:-1467799 None:intergenic
CAAAATTGGTTTGTAAAGTT+AGG 0.296038 7:+1463384 MsG0780036024.01.T01:five_prime_UTR
TCTTCTAGTTCTAGTGTAAC+TGG 0.297794 7:-1464262 None:intergenic
AGAACTCACATCAAGTAGTA+TGG 0.299815 7:+1463483 MsG0780036024.01.T01:five_prime_UTR
CATTTAGCATTCCAAATTAG+AGG 0.301349 7:+1464914 MsG0780036024.01.T01:five_prime_UTR
CCAATATGGGTGGGCTTGAT+AGG 0.302204 7:+1463445 MsG0780036024.01.T01:five_prime_UTR
ATAATAGTGAGGGAAATATT+TGG 0.310430 7:+1462795 MsG0780036024.01.T01:intron
CCAGTGCATGGTTCGTCAAT+AGG 0.316808 7:+1464123 MsG0780036024.01.T01:five_prime_UTR
TGGAAAGAATATGCACTTCT+TGG 0.320680 7:+1468135 MsG0780036024.01.T01:CDS
GCAATTTGGATTGGACTTGC+TGG 0.332582 7:+1468008 MsG0780036024.01.T01:CDS
TTTAAGTAGTTGATAGGTTT+AGG 0.335216 7:+1463522 MsG0780036024.01.T01:five_prime_UTR
ACCAAATATATTCAATCATT+AGG 0.337343 7:+1464672 MsG0780036024.01.T01:five_prime_UTR
ATCATGGAGTTTGCGGGATA+AGG 0.338847 7:-1463922 None:intergenic
TAGAATGTATCACGCACTTT+TGG 0.340525 7:+1468267 MsG0780036024.01.T01:intron
CAAGCAGTGCGAACCAACTA+TGG 0.342271 7:-1468500 None:intergenic
CTCACGTAGCTATCTATATA+AGG 0.343357 7:-1468165 None:intergenic
TCATGGAGTTTGCGGGATAA+GGG 0.345273 7:-1463921 None:intergenic
GCTAAACGGGCCGGGCTGGC+GGG 0.348901 7:-1468435 None:intergenic
GAAGAATTTAAGTAGTTGAT+AGG 0.351541 7:+1463516 MsG0780036024.01.T01:five_prime_UTR
AATATTAAAGAAACAGTATC+TGG 0.353506 7:-1464645 None:intergenic
TATGTTTGTAGGCGATAGTT+AGG 0.354561 7:-1463246 None:intergenic
GAAGGACAGCTTCGTCAAAA+TGG 0.355175 7:+1468366 MsG0780036024.01.T01:CDS
CCTATCAAGCCCACCCATAT+TGG 0.355276 7:-1463445 None:intergenic
AAAACGGGGCAGGCACGGGC+AGG 0.356088 7:+1468532 MsG0780036024.01.T01:three_prime_UTR
CGGGGCAGGCACGGGCAGGG+CGG 0.357893 7:+1468536 MsG0780036024.01.T01:three_prime_UTR
TTCTTTCTGACTTGCTGATC+CGG 0.360506 7:+1462615 MsG0780036024.01.T01:five_prime_UTR
TGAACAATGCTAATTTGGTT+TGG 0.363463 7:+1468115 MsG0780036024.01.T01:CDS
GGGGCAGGCACGGGCAGGGC+GGG 0.364146 7:+1468537 MsG0780036024.01.T01:three_prime_UTR
ATTACACTAGATATGTTTGT+AGG 0.365631 7:-1463257 None:intergenic
ATCAAAATCAATTTCACGAT+TGG 0.371432 7:+1464377 MsG0780036024.01.T01:five_prime_UTR
ATGGAAGATTTACTGGCTTT+CGG 0.372863 7:+1466456 MsG0780036024.01.T01:CDS
ATTGTTCAAATCTCTTGATA+TGG 0.377004 7:-1468100 None:intergenic
GTATATTGATGATTGGTGAT+AGG 0.377261 7:+1463316 MsG0780036024.01.T01:five_prime_UTR
CACACATTTGCAATTTGGAT+TGG 0.379956 7:+1467999 MsG0780036024.01.T01:CDS
TATTTGGCTTTGTAGCATTT+GGG 0.384374 7:+1462811 MsG0780036024.01.T01:five_prime_UTR
GACATCCTGCATGTGGTCTA+TGG 0.390027 7:-1463220 None:intergenic
TCACGAATCATAGGACAAAA+TGG 0.398415 7:-1462552 None:intergenic
AACGGGCCGGGCTGGCGGGT+TGG 0.398642 7:-1468431 None:intergenic
TTTGAACTTTCTTCCATAGT+TGG 0.401484 7:+1468487 MsG0780036024.01.T01:three_prime_UTR
TTACTTTAAGTAATTGGATC+TGG 0.403500 7:+1462523 MsG0780036024.01.T01:five_prime_UTR
GGAATTAGGTTATAAAGATA+AGG 0.405599 7:+1463627 MsG0780036024.01.T01:five_prime_UTR
CAGTGCATGGTTCGTCAATA+GGG 0.406043 7:+1464124 MsG0780036024.01.T01:five_prime_UTR
GAGAAGGGTGAGGATAGATA+TGG 0.406484 7:+1463132 MsG0780036024.01.T01:five_prime_UTR
GGCTAAACGGGCCGGGCTGG+CGG 0.407954 7:-1468436 None:intergenic
TCCGCTACATGGAGCAGAAA+TGG 0.411595 7:-1462422 None:intergenic
GCAGGCTAAACGGGCCGGGC+TGG 0.412432 7:-1468439 None:intergenic
CAGCATGGCGGCTTTCTCTC+AGG 0.413298 7:-1462652 None:intergenic
TCAAAATCAATTTCACGATT+GGG 0.414365 7:+1464378 MsG0780036024.01.T01:five_prime_UTR
TCCCGCAGGTTCGTGTGAGC+TGG 0.419728 7:+1462592 MsG0780036024.01.T01:five_prime_UTR
GTCCAAGTGCAGTGATGATC+TGG 0.420065 7:+1464861 MsG0780036024.01.T01:intron
ACGGCGATGGCGACTTAAGA+TGG 0.421072 7:-1466417 None:intergenic
ATCTAAAATGTGTTAATAAG+TGG 0.421100 7:-1463412 None:intergenic
CTTTATTCATTGCTAGATCA+AGG 0.421216 7:-1463189 None:intergenic
ATGGGAATCGTTTGTACATT+CGG 0.425052 7:-1462469 None:intergenic
GGTTCGTCAATAGGGTTGGC+GGG 0.430110 7:+1464132 MsG0780036024.01.T01:five_prime_UTR
GAGAAAGCTTCAGCTGTAGA+AGG 0.431524 7:+1462389 None:intergenic
GTGACCGCAAGGACAGATTT+CGG 0.431999 7:+1464599 MsG0780036024.01.T01:five_prime_UTR
TACCGTGACTTTAAAAGTTG+TGG 0.435390 7:+1463558 MsG0780036024.01.T01:five_prime_UTR
GCATACATAACAATAATTAG+AGG 0.435469 7:-1462851 None:intergenic
TCAATTATATACTTGAGAAC+TGG 0.438289 7:-1464298 None:intergenic
TCCTTCGGTTAGGAAGCTTC+AGG 0.439567 7:+1463947 MsG0780036024.01.T01:five_prime_UTR
AGGCTTTATGCCTTCCAGTC+AGG 0.439696 7:+1465559 MsG0780036024.01.T01:CDS
GGAGGCTGCACGTTGGATAA+TGG 0.442542 7:+1462674 MsG0780036024.01.T01:five_prime_UTR
GAATTAGGTTATAAAGATAA+GGG 0.443123 7:+1463628 MsG0780036024.01.T01:five_prime_UTR
GACGCGAACTTACAAGTTGC+TGG 0.445450 7:-1462495 None:intergenic
AGGAGCATCATGGAGTTTGC+GGG 0.446925 7:-1463928 None:intergenic
CTATCAAGACATTCTATTGA+AGG 0.455095 7:-1468060 None:intergenic
ATTAGAAATTAAGGTGAAGT+GGG 0.458237 7:+1463076 MsG0780036024.01.T01:five_prime_UTR
CAAGTATATAATTGACTGGT+AGG 0.459744 7:+1464306 MsG0780036024.01.T01:five_prime_UTR
TACAGATTGCATTTCCTGAC+TGG 0.461997 7:-1465573 None:intergenic
TGACTTTAAAAGTTGTGGAT+TGG 0.463160 7:+1463563 MsG0780036024.01.T01:five_prime_UTR
TTGTACATTCGGAACGAAGA+AGG 0.464490 7:-1462458 None:intergenic
ATGAATTGTATATTGATGAT+TGG 0.466307 7:+1463309 MsG0780036024.01.T01:five_prime_UTR
GGGTGAGGATAGATATGGTA+TGG 0.468631 7:+1463137 MsG0780036024.01.T01:five_prime_UTR
ATCCAGATCATCACTGCACT+TGG 0.469479 7:-1464863 None:intergenic
TATGACATGTGATGTGGATA+AGG 0.469824 7:+1464405 MsG0780036024.01.T01:five_prime_UTR
GTCCTATGATTCGTGAGCTT+AGG 0.472626 7:+1462559 MsG0780036024.01.T01:five_prime_UTR
ATCCTAAGCTCACGAATCAT+AGG 0.473063 7:-1462561 None:intergenic
CAAACTCCATGATGCTCCTT+CGG 0.473822 7:+1463932 MsG0780036024.01.T01:five_prime_UTR
GATACGTAGGGGTGGCAAAA+CGG 0.476483 7:+1468406 MsG0780036024.01.T01:exon
CGTTACGATTTCAAGAGAAA+TGG 0.477363 7:+1466437 MsG0780036024.01.T01:CDS
TTGATATGGCACAAACAGAT+AGG 0.478108 7:-1468086 None:intergenic
AAGGAGCATCATGGAGTTTG+CGG 0.481975 7:-1463929 None:intergenic
CTGAGAGAAAGCCGCCATGC+TGG 0.483425 7:+1462653 MsG0780036024.01.T01:five_prime_UTR
TTCACAAGCATCGCGGATCA+TGG 0.486090 7:-1464441 None:intergenic
ATGACATGTGATGTGGATAA+GGG 0.487485 7:+1464406 MsG0780036024.01.T01:five_prime_UTR
TCAGGCAAACGCAAAGCATC+CGG 0.490982 7:-1462634 None:intergenic
ACGGATCCAACCCGCCAGCC+CGG 0.495259 7:+1468425 MsG0780036024.01.T01:three_prime_UTR
TATATAATTGACTGGTAGGT+TGG 0.495408 7:+1464310 MsG0780036024.01.T01:five_prime_UTR
TTCGTTATGATTCCAGTGCA+TGG 0.497478 7:+1464111 MsG0780036024.01.T01:five_prime_UTR
ATGTTTGTAGGCGATAGTTA+GGG 0.498052 7:-1463245 None:intergenic
AAGTGCAGGTGTCCGCTACA+TGG 0.498179 7:-1462433 None:intergenic
TCCTTCAGAGCGGAAACAAT+AGG 0.498583 7:-1468349 None:intergenic
TATATTGATGATTGGTGATA+GGG 0.499043 7:+1463317 MsG0780036024.01.T01:five_prime_UTR
TCCTATTGTTTCCGCTCTGA+AGG 0.500152 7:+1468348 MsG0780036024.01.T01:CDS
TCTTGAAATCGTAACGGCGA+TGG 0.500165 7:-1466430 None:intergenic
TAAGGTGAAGTGGGGTCCAT+GGG 0.505282 7:+1463085 MsG0780036024.01.T01:five_prime_UTR
TGGTTCGTCAATAGGGTTGG+CGG 0.505721 7:+1464131 MsG0780036024.01.T01:five_prime_UTR
TAGAGAAGGGCTAGGTCGAC+CGG 0.505924 7:+1464181 MsG0780036024.01.T01:five_prime_UTR
AAACGGGGCAGGCACGGGCA+GGG 0.508377 7:+1468533 MsG0780036024.01.T01:three_prime_UTR
AACAAACAATGGTATCTAAG+AGG 0.508965 7:+1463163 MsG0780036024.01.T01:five_prime_UTR
TTGTTGTTGTTGCTCATCAA+TGG 0.511522 7:-1464045 None:intergenic
ACAACCAAAATAATCCCATA+AGG 0.511818 7:-1468597 None:intergenic
TGTCGTCTTCGATCCTCCCA+TGG 0.514760 7:-1463101 None:intergenic
TTAAGGTGAAGTGGGGTCCA+TGG 0.515614 7:+1463084 MsG0780036024.01.T01:five_prime_UTR
ACTTACAAGTTGCTGGCCGA+TGG 0.518244 7:-1462488 None:intergenic
AGTTTGCGGGATAAGGGGAT+AGG 0.518584 7:-1463915 None:intergenic
GATCTAGCAATGAATAAAGA+TGG 0.522416 7:+1463193 MsG0780036024.01.T01:five_prime_UTR
AAATAGCAGGCTAAACGGGC+CGG 0.524500 7:-1468444 None:intergenic
CCTATTGACGAACCATGCAC+TGG 0.525606 7:-1464123 None:intergenic
TAGGATGCTGATTGTCCCGC+AGG 0.527422 7:+1462578 MsG0780036024.01.T01:five_prime_UTR
TAGCGAAATGCATTTATCTC+CGG 0.528257 7:-1464200 None:intergenic
ACAATAGGAGAGAAATAACT+TGG 0.528810 7:-1468334 None:intergenic
GAACGAAGAAGGCGAAGTGC+AGG 0.535721 7:-1462447 None:intergenic
TCCATGATGCTCCTTCGGTT+AGG 0.536196 7:+1463937 MsG0780036024.01.T01:five_prime_UTR
TATTAGAAATTAAGGTGAAG+TGG 0.539963 7:+1463075 MsG0780036024.01.T01:five_prime_UTR
CTTACAAGTTGCTGGCCGAT+GGG 0.545876 7:-1462487 None:intergenic
GACGACAGAGGTAGAGAGAA+GGG 0.547423 7:+1463117 MsG0780036024.01.T01:five_prime_UTR
AATAGCAGGCTAAACGGGCC+GGG 0.552732 7:-1468443 None:intergenic
CATGGAGTTTGCGGGATAAG+GGG 0.554493 7:-1463920 None:intergenic
AAAGAGATTGAGAATTTGCA+TGG 0.557143 7:+1465241 MsG0780036024.01.T01:five_prime_UTR
AGTGAAACTGCTGATAGAGA+AGG 0.557494 7:+1464167 MsG0780036024.01.T01:five_prime_UTR
ATATTTCAAAATTAGATCAA+AGG 0.559314 7:-1467971 None:intergenic
GAACTCACATCAAGTAGTAT+GGG 0.559480 7:+1463484 MsG0780036024.01.T01:five_prime_UTR
TTCTCAAGTATATAATTGAC+TGG 0.561099 7:+1464302 MsG0780036024.01.T01:five_prime_UTR
TGTGATAAAATGTGTGAAGC+AGG 0.566153 7:+1465539 MsG0780036024.01.T01:CDS
GCATGGTTCGTCAATAGGGT+TGG 0.570661 7:+1464128 MsG0780036024.01.T01:five_prime_UTR
CATGAGCAAACTGATAGCTA+TGG 0.570872 7:+1463589 MsG0780036024.01.T01:five_prime_UTR
TCCTGAAGCTTCCTAACCGA+AGG 0.572068 7:-1463948 None:intergenic
AGAGAAAGCCGCCATGCTGG+AGG 0.573199 7:+1462656 MsG0780036024.01.T01:five_prime_UTR
AGACGACAGAGGTAGAGAGA+AGG 0.574718 7:+1463116 MsG0780036024.01.T01:five_prime_UTR
TCCATTTCTGCTCCATGTAG+CGG 0.577164 7:+1462421 MsG0780036024.01.T01:five_prime_UTR
ACCAGCTCACACGAACCTGC+GGG 0.582141 7:-1462593 None:intergenic
CATTTCTCTTGAAATCGTAA+CGG 0.582450 7:-1466436 None:intergenic
TCCTAACCGAAGGAGCATCA+TGG 0.584313 7:-1463938 None:intergenic
GACATTCTATTGAAGGAGCA+AGG 0.586247 7:-1468053 None:intergenic
GGTGAAGTGGGGTCCATGGG+AGG 0.587188 7:+1463088 MsG0780036024.01.T01:five_prime_UTR
GATTGCATTTCCTGACTGGA+AGG 0.588975 7:-1465569 None:intergenic
CAATCCAAATTGCAAATGTG+TGG 0.592711 7:-1467998 None:intergenic
GTGAAACTGCTGATAGAGAA+GGG 0.593466 7:+1464168 MsG0780036024.01.T01:five_prime_UTR
GTTTGCGGGATAAGGGGATA+GGG 0.594528 7:-1463914 None:intergenic
ATTTGTCGTAATAATAGTGA+GGG 0.599024 7:+1462785 MsG0780036024.01.T01:intron
GAACTAGAAGAAGAAACATA+CGG 0.604179 7:+1464274 MsG0780036024.01.T01:five_prime_UTR
CATCATTGATCTGCACTGCA+AGG 0.605146 7:-1463796 None:intergenic
GTATTGCTGTGGTCAGAACA+AGG 0.607270 7:+1465310 MsG0780036024.01.T01:CDS
AACCAGCTCACACGAACCTG+CGG 0.607876 7:-1462594 None:intergenic
GTTCGTCAATAGGGTTGGCG+GGG 0.611039 7:+1464133 MsG0780036024.01.T01:five_prime_UTR
AAATATATTCAATCATTAGG+AGG 0.611646 7:+1464675 MsG0780036024.01.T01:five_prime_UTR
GGATATTATGACATGTGATG+TGG 0.611956 7:+1464399 MsG0780036024.01.T01:five_prime_UTR
ACTGCTGATAGAGAAGGGCT+AGG 0.614243 7:+1464173 MsG0780036024.01.T01:five_prime_UTR
CAGAGGTAGAGAGAAGGGTG+AGG 0.615625 7:+1463122 MsG0780036024.01.T01:five_prime_UTR
CTTCTATCACTTACAGTCTG+TGG 0.618990 7:-1462708 None:intergenic
CCATGCTGGAGGCTGCACGT+TGG 0.619960 7:+1462667 MsG0780036024.01.T01:five_prime_UTR
TGGTATGGACAAACAAACAA+TGG 0.620743 7:+1463152 MsG0780036024.01.T01:five_prime_UTR
CCAACGTGCAGCCTCCAGCA+TGG 0.624549 7:-1462667 None:intergenic
TACTAACAAGGAAACAATCG+TGG 0.629927 7:+1463994 MsG0780036024.01.T01:five_prime_UTR
AAAACCGTGGCTTTGTACAG+AGG 0.632429 7:+1464019 MsG0780036024.01.T01:five_prime_UTR
GTCTACCATAGACCACATGC+AGG 0.643872 7:+1463215 MsG0780036024.01.T01:five_prime_UTR
GTACACGTATCCGATACGTA+GGG 0.646964 7:+1468394 MsG0780036024.01.T01:CDS
AGCAGATCTGTGATCTCCCG+AGG 0.648202 7:-1468290 None:intergenic
GTAACCTCTGTACAAAGCCA+CGG 0.651438 7:-1464023 None:intergenic
TCTTTGTGAAAGTGACCGCA+AGG 0.652375 7:+1464588 MsG0780036024.01.T01:five_prime_UTR
GACGAAGCTGTCCTTCAGAG+CGG 0.656120 7:-1468359 None:intergenic
GGAATCATAACGAACAAGAG+TGG 0.658844 7:-1464102 None:intergenic
GCACTGCAAGGAGTGAAGCA+AGG 0.662293 7:-1463784 None:intergenic
TAGGGTAGACATCCTGCATG+TGG 0.667420 7:-1463227 None:intergenic
AATGTACAAACGATTCCCAT+CGG 0.677156 7:+1462472 MsG0780036024.01.T01:five_prime_UTR
AACAATCGTGGATAAAACCG+TGG 0.677928 7:+1464006 MsG0780036024.01.T01:five_prime_UTR
GTGGATAAGGGTTAATGACG+AGG 0.682278 7:+1464418 MsG0780036024.01.T01:five_prime_UTR
TGCTTGTGAATACATACTAG+CGG 0.682461 7:+1464454 MsG0780036024.01.T01:five_prime_UTR
TTAGAAATTAAGGTGAAGTG+GGG 0.685587 7:+1463077 MsG0780036024.01.T01:five_prime_UTR
CTTATATAGATAGCTACGTG+AGG 0.687285 7:+1468166 MsG0780036024.01.T01:CDS
ACGTGCAGCCTCCAGCATGG+CGG 0.691409 7:-1462664 None:intergenic
TGTACACGTATCCGATACGT+AGG 0.694997 7:+1468393 MsG0780036024.01.T01:CDS
CGACGCTTCAATGAGACGAG+AGG 0.695680 7:+1463971 MsG0780036024.01.T01:five_prime_UTR
GGGAGGATCGAAGACGACAG+AGG 0.696944 7:+1463105 MsG0780036024.01.T01:five_prime_UTR
ACGTATCCGATACGTAGGGG+TGG 0.698369 7:+1468398 MsG0780036024.01.T01:exon
GCATCCGAAATCTGTCCTTG+CGG 0.702733 7:-1464603 None:intergenic
TGAGACGAGAGGTACTAACA+AGG 0.724075 7:+1463982 MsG0780036024.01.T01:five_prime_UTR
TACACGTATCCGATACGTAG+GGG 0.737006 7:+1468395 MsG0780036024.01.T01:CDS
GTATGTATTCACAAGCATCG+CGG 0.765407 7:-1464448 None:intergenic
GGAAACATAACTGATTTACG+CGG 0.790778 7:+1464475 MsG0780036024.01.T01:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTTATAATTTTTATTTT+TGG + Chr7:1462976-1462995 MsG0780036024.01.T01:five_prime_UTR 0.0%
!! AAAGAAAGAAAAAAAAAATA+GGG - Chr7:1465659-1465678 None:intergenic 10.0%
!! ATAAAATCATACTTTAATAT+TGG - Chr7:1467184-1467203 None:intergenic 10.0%
!! ATGATAAATATTAGAAATTA+AGG + Chr7:1463067-1463086 MsG0780036024.01.T01:five_prime_UTR 10.0%
!! GAATGAAAAAAATAATATAA+AGG - Chr7:1468203-1468222 None:intergenic 10.0%
!! TAAAATCATACTTTAATATT+GGG - Chr7:1467183-1467202 None:intergenic 10.0%
!! TACTATAAAATTTAATTGTT+CGG - Chr7:1467803-1467822 None:intergenic 10.0%
!! TTTAAAAAAATTATATGGTA+AGG - Chr7:1466153-1466172 None:intergenic 10.0%
!!! ACATTTTCTTATATATTTTT+TGG + Chr7:1465193-1465212 MsG0780036024.01.T01:intron 10.0%
!!! ATATAATTTTTTTAAACAAG+AGG + Chr7:1466157-1466176 MsG0780036024.01.T01:intron 10.0%
!!! TCTTGTTTAAAAAAATTATA+TGG - Chr7:1466158-1466177 None:intergenic 10.0%
!!! TTATAAGAATTACATTTTTT+TGG + Chr7:1467894-1467913 MsG0780036024.01.T01:intron 10.0%
!!! TTTTCTTTTCTATTTTATTA+CGG + Chr7:1464734-1464753 MsG0780036024.01.T01:five_prime_UTR 10.0%
!! ACTATAAAATTTAATTGTTC+GGG - Chr7:1467802-1467821 None:intergenic 15.0%
!! ATATTTCAAAATTAGATCAA+AGG - Chr7:1467974-1467993 None:intergenic 15.0%
!! ATTCAATATACAATTATTAG+TGG + Chr7:1467677-1467696 MsG0780036024.01.T01:intron 15.0%
!! CAAAGAAAGAAAAAAAAAAT+AGG - Chr7:1465660-1465679 None:intergenic 15.0%
!! GCATACATTAAAAAATAAAA+AGG - Chr7:1466518-1466537 None:intergenic 15.0%
!! TTATGAATAAAATTGGAATT+AGG + Chr7:1463613-1463632 MsG0780036024.01.T01:five_prime_UTR 15.0%
!!! AATTTCTTTTAGAATACTTA+GGG + Chr7:1464075-1464094 MsG0780036024.01.T01:five_prime_UTR 15.0%
!!! ATAACGATAAATTTGTTTTT+TGG + Chr7:1462931-1462950 MsG0780036024.01.T01:five_prime_UTR 15.0%
!!! CGTTTTTCTTTTATTTTTTT+AGG + Chr7:1468566-1468585 MsG0780036024.01.T01:three_prime_UTR 15.0%
!!! TAATAAGATTTGTTTTATGT+TGG + Chr7:1468628-1468647 MsG0780036024.01.T01:three_prime_UTR 15.0%
!!! TATATTTTTTGGTAATTTCA+AGG + Chr7:1465204-1465223 MsG0780036024.01.T01:intron 15.0%
!!! TTGATCTAATTTTGAAATAT+GGG + Chr7:1467974-1467993 MsG0780036024.01.T01:CDS 15.0%
!!! TTTGATCTAATTTTGAAATA+TGG + Chr7:1467973-1467992 MsG0780036024.01.T01:CDS 15.0%
!! AAATATATTCAATCATTAGG+AGG + Chr7:1464675-1464694 MsG0780036024.01.T01:five_prime_UTR 20.0%
!! AATATTAAAGAAACAGTATC+TGG - Chr7:1464648-1464667 None:intergenic 20.0%
!! ACCAAATATATTCAATCATT+AGG + Chr7:1464672-1464691 MsG0780036024.01.T01:five_prime_UTR 20.0%
!! ACTATAAATGCTTGATATTT+GGG + Chr7:1467429-1467448 MsG0780036024.01.T01:intron 20.0%
!! ATTACGACAAATTTATTCAA+CGG - Chr7:1462777-1462796 None:intergenic 20.0%
!! ATTTCCAATAATCATAACTT+TGG + Chr7:1467327-1467346 MsG0780036024.01.T01:intron 20.0%
!! CACTATTTACTTTAAGTAAT+TGG + Chr7:1462517-1462536 MsG0780036024.01.T01:five_prime_UTR 20.0%
!! CATAACTATAAAATACTGTT+AGG + Chr7:1467573-1467592 MsG0780036024.01.T01:intron 20.0%
!! CTATGGTTTATGAATAAAAT+TGG + Chr7:1463606-1463625 MsG0780036024.01.T01:five_prime_UTR 20.0%
!! GAAAAACTATAAGAATTGTT+AGG + Chr7:1465917-1465936 MsG0780036024.01.T01:intron 20.0%
!! GAATTAGGTTATAAAGATAA+GGG + Chr7:1463628-1463647 MsG0780036024.01.T01:five_prime_UTR 20.0%
!! TAAAAAAGATGGTAGAAAAT+AGG + Chr7:1465794-1465813 MsG0780036024.01.T01:intron 20.0%
!! TCAAAACACAATAACATAAA+TGG - Chr7:1464762-1464781 None:intergenic 20.0%
!! TCCTAATGATTGAATATATT+TGG - Chr7:1464676-1464695 None:intergenic 20.0%
!! TCGATTCAATACAAAATTTA+AGG + Chr7:1467143-1467162 MsG0780036024.01.T01:intron 20.0%
!! TTGATATTTGGGTATTAATT+TGG + Chr7:1467440-1467459 MsG0780036024.01.T01:intron 20.0%
!! TTTAAAAAACTTGTAGTACA+AGG + Chr7:1463279-1463298 MsG0780036024.01.T01:five_prime_UTR 20.0%
!! TTTCCAATAATCATAACTTT+GGG + Chr7:1467328-1467347 MsG0780036024.01.T01:intron 20.0%
!! TTTGAAAACTGAAATTCTAA+AGG - Chr7:1464804-1464823 None:intergenic 20.0%
!!! AATAACCTTAGTTTTTTGAA+GGG - Chr7:1463835-1463854 None:intergenic 20.0%
!!! ACAATTCTTATAGTTTTTCT+AGG - Chr7:1465916-1465935 None:intergenic 20.0%
!!! ACATAGGTTATTGTTTTTTT+AGG - Chr7:1463025-1463044 None:intergenic 20.0%
!!! ACATGTGTATTTTAGAAATT+GGG + Chr7:1463340-1463359 MsG0780036024.01.T01:five_prime_UTR 20.0%
!!! ATATCAATGATTCAAGTTAA+AGG + Chr7:1467372-1467391 MsG0780036024.01.T01:intron 20.0%
!!! ATCTAAAATGTGTTAATAAG+TGG - Chr7:1463415-1463434 None:intergenic 20.0%
!!! ATGAATTGTATATTGATGAT+TGG + Chr7:1463309-1463328 MsG0780036024.01.T01:five_prime_UTR 20.0%
!!! CATAGGTTATTGTTTTTTTA+GGG - Chr7:1463024-1463043 None:intergenic 20.0%
!!! CTAACAGTATTTTATAGTTA+TGG - Chr7:1467575-1467594 None:intergenic 20.0%
!!! GAATTTCTTTTAGAATACTT+AGG + Chr7:1464074-1464093 MsG0780036024.01.T01:five_prime_UTR 20.0%
!!! GTTTTCATTAATATAGATCT+TGG - Chr7:1464520-1464539 None:intergenic 20.0%
!!! TAATAACCTTAGTTTTTTGA+AGG - Chr7:1463836-1463855 None:intergenic 20.0%
!!! TATCAATGATTCAAGTTAAA+GGG + Chr7:1467373-1467392 MsG0780036024.01.T01:intron 20.0%
!!! TATGTAAGTGTAAAGTTTTA+GGG - Chr7:1466249-1466268 None:intergenic 20.0%
!!! TCGTTTTATAAAGAATACAT+AGG - Chr7:1463041-1463060 None:intergenic 20.0%
!!! TTATGTAAGTGTAAAGTTTT+AGG - Chr7:1466250-1466269 None:intergenic 20.0%
!!! TTTAACTTGAATCATTGATA+TGG - Chr7:1467373-1467392 None:intergenic 20.0%
!!! TTTTTCTTTTTAACTTATGC+AGG + Chr7:1465498-1465517 MsG0780036024.01.T01:intron 20.0%
! AATTGTTAGGAAAGATTTAG+AGG + Chr7:1465930-1465949 MsG0780036024.01.T01:intron 25.0%
! AATTTGTCGTAATAATAGTG+AGG + Chr7:1462784-1462803 MsG0780036024.01.T01:intron 25.0%
! ACATAAATAGTGAAGTAACT+AGG + Chr7:1466315-1466334 MsG0780036024.01.T01:intron 25.0%
! ACCAATATGAGAATGAATAA+AGG - Chr7:1465347-1465366 None:intergenic 25.0%
! AGAAGATAGAATTTGATCTA+AGG - Chr7:1465437-1465456 None:intergenic 25.0%
! AGATTTGAACAATGCTAATT+TGG + Chr7:1468110-1468129 MsG0780036024.01.T01:CDS 25.0%
! ATAATAGTGAGGGAAATATT+TGG + Chr7:1462795-1462814 MsG0780036024.01.T01:intron 25.0%
! ATCAAAATCAATTTCACGAT+TGG + Chr7:1464377-1464396 MsG0780036024.01.T01:five_prime_UTR 25.0%
! ATTACACTAGATATGTTTGT+AGG - Chr7:1463260-1463279 None:intergenic 25.0%
! ATTAGAAATTAAGGTGAAGT+GGG + Chr7:1463076-1463095 MsG0780036024.01.T01:five_prime_UTR 25.0%
! ATTGTTCAAATCTCTTGATA+TGG - Chr7:1468103-1468122 None:intergenic 25.0%
! ATTTGTCGTAATAATAGTGA+GGG + Chr7:1462785-1462804 MsG0780036024.01.T01:intron 25.0%
! CAATATACAATTATTAGTGG+AGG + Chr7:1467680-1467699 MsG0780036024.01.T01:intron 25.0%
! CACTATAAATGCTTGATATT+TGG + Chr7:1467428-1467447 MsG0780036024.01.T01:intron 25.0%
! CATAAATAGTGAAGTAACTA+GGG + Chr7:1466316-1466335 MsG0780036024.01.T01:intron 25.0%
! GAAGAATTTAAGTAGTTGAT+AGG + Chr7:1463516-1463535 MsG0780036024.01.T01:five_prime_UTR 25.0%
! GAAGATAGAATTTGATCTAA+GGG - Chr7:1465436-1465455 None:intergenic 25.0%
! GATCTAATAAAAAAAGAGGT+TGG + Chr7:1468030-1468049 MsG0780036024.01.T01:CDS 25.0%
! GATGTGTTATGTAATTTACA+CGG + Chr7:1467039-1467058 MsG0780036024.01.T01:intron 25.0%
! GCATACATAACAATAATTAG+AGG - Chr7:1462854-1462873 None:intergenic 25.0%
! GGAATTAGGTTATAAAGATA+AGG + Chr7:1463627-1463646 MsG0780036024.01.T01:five_prime_UTR 25.0%
! GTAGCATATAGTAAAAAAGA+TGG + Chr7:1465783-1465802 MsG0780036024.01.T01:intron 25.0%
! TATTAGAAATTAAGGTGAAG+TGG + Chr7:1463075-1463094 MsG0780036024.01.T01:five_prime_UTR 25.0%
! TCAAAATCAATTTCACGATT+GGG + Chr7:1464378-1464397 MsG0780036024.01.T01:five_prime_UTR 25.0%
! TCAATTATATACTTGAGAAC+TGG - Chr7:1464301-1464320 None:intergenic 25.0%
! TCCTTTATTCATTCTCATAT+TGG + Chr7:1465343-1465362 MsG0780036024.01.T01:intron 25.0%
! TTACTTTAAGTAATTGGATC+TGG + Chr7:1462523-1462542 MsG0780036024.01.T01:five_prime_UTR 25.0%
! TTCTCAAGTATATAATTGAC+TGG + Chr7:1464302-1464321 MsG0780036024.01.T01:five_prime_UTR 25.0%
!! AATTCTCAATCTCTTTTATG+AGG - Chr7:1465237-1465256 None:intergenic 25.0%
!! ACAATGATTGATGAGTTTTA+AGG - Chr7:1467008-1467027 None:intergenic 25.0%
!! ACGAAAATTTTCTATTCTCT+GGG - Chr7:1467827-1467846 None:intergenic 25.0%
!! AGAAACTAATCAAGATTTTC+AGG + Chr7:1465609-1465628 MsG0780036024.01.T01:CDS 25.0%
!! AGATCATATTTTGTCCAATA+TGG + Chr7:1463431-1463450 MsG0780036024.01.T01:five_prime_UTR 25.0%
!! ATCAATGATTCAAGTTAAAG+GGG + Chr7:1467374-1467393 MsG0780036024.01.T01:intron 25.0%
!! ATTGCAAAACTTGTTTATGA+TGG - Chr7:1465061-1465080 None:intergenic 25.0%
!! CATAACCATTAAACTTTTCA+GGG + Chr7:1467757-1467776 MsG0780036024.01.T01:intron 25.0%
!! CTTTACAAACCAATTTTGTA+AGG - Chr7:1463382-1463401 None:intergenic 25.0%
!! GATCATATTTTGTCCAATAT+GGG + Chr7:1463432-1463451 MsG0780036024.01.T01:five_prime_UTR 25.0%
!! TATATTGATGATTGGTGATA+GGG + Chr7:1463317-1463336 MsG0780036024.01.T01:five_prime_UTR 25.0%
!! TATTTGATCAACCTTGATTT+TGG - Chr7:1466392-1466411 None:intergenic 25.0%
!! TTATCCTTATGGGATTATTT+TGG + Chr7:1468593-1468612 MsG0780036024.01.T01:three_prime_UTR 25.0%
!! TTGCAAAACTTGTTTATGAT+GGG - Chr7:1465060-1465079 None:intergenic 25.0%
!! TTTTCCCATTTCTGTAATTT+CGG + Chr7:1466286-1466305 MsG0780036024.01.T01:intron 25.0%
!!! ATAGATCCCTAATTTTTTGA+CGG + Chr7:1463689-1463708 MsG0780036024.01.T01:five_prime_UTR 25.0%
!!! ATGAGTTTTAAGGTTTAAAG+TGG - Chr7:1466998-1467017 None:intergenic 25.0%
!!! CAAAATTGGTTTGTAAAGTT+AGG + Chr7:1463384-1463403 MsG0780036024.01.T01:five_prime_UTR 25.0%
!!! GACATGTGTATTTTAGAAAT+TGG + Chr7:1463339-1463358 MsG0780036024.01.T01:five_prime_UTR 25.0%
!!! TAAGATTTGTTTTATGTTGG+TGG + Chr7:1468631-1468650 MsG0780036024.01.T01:three_prime_UTR 25.0%
!!! TTTAAGTAGTTGATAGGTTT+AGG + Chr7:1463522-1463541 MsG0780036024.01.T01:five_prime_UTR 25.0%
AAAGAGATTGAGAATTTGCA+TGG + Chr7:1465241-1465260 MsG0780036024.01.T01:five_prime_UTR 30.0%
AAAGTAACATCATAAGGAGA+AGG - Chr7:1468240-1468259 None:intergenic 30.0%
AACAAACAATGGTATCTAAG+AGG + Chr7:1463163-1463182 MsG0780036024.01.T01:five_prime_UTR 30.0%
AACGGAAATTATTACGACAA+AGG - Chr7:1462759-1462778 None:intergenic 30.0%
AAGAGAAATGGAAGATTTAC+TGG + Chr7:1466449-1466468 MsG0780036024.01.T01:CDS 30.0%
ACAACCAAAATAATCCCATA+AGG - Chr7:1468600-1468619 None:intergenic 30.0%
ACAATAGGAGAGAAATAACT+TGG - Chr7:1468337-1468356 None:intergenic 30.0%
ACGGAAATTATTACGACAAA+GGG - Chr7:1462758-1462777 None:intergenic 30.0%
AGCCATAAAGTAACATCATA+AGG - Chr7:1468246-1468265 None:intergenic 30.0%
ATAATCATAACTTTGGGCAA+AGG + Chr7:1467334-1467353 MsG0780036024.01.T01:intron 30.0%
ATCACATCACATATCATCAA+GGG - Chr7:1464976-1464995 None:intergenic 30.0%
ATGTAAAACTCAAAACGCAT+GGG - Chr7:1467736-1467755 None:intergenic 30.0%
ATTTCCCGAAATTACAGAAA+TGG - Chr7:1466294-1466313 None:intergenic 30.0%
CAACATATTGTGCAAAGAAA+TGG - Chr7:1465697-1465716 None:intergenic 30.0%
CAAGTATATAATTGACTGGT+AGG + Chr7:1464306-1464325 MsG0780036024.01.T01:five_prime_UTR 30.0%
CATTTAGCATTCCAAATTAG+AGG + Chr7:1464914-1464933 MsG0780036024.01.T01:five_prime_UTR 30.0%
CATTTCTCTTGAAATCGTAA+CGG - Chr7:1466439-1466458 None:intergenic 30.0%
CTATCAAGACATTCTATTGA+AGG - Chr7:1468063-1468082 None:intergenic 30.0%
CTCATGCATTAAAGAATTGA+TGG - Chr7:1467539-1467558 None:intergenic 30.0%
CTTGTAGTATTATGAAGAGA+TGG + Chr7:1466607-1466626 MsG0780036024.01.T01:intron 30.0%
CTTTATTCATTGCTAGATCA+AGG - Chr7:1463192-1463211 None:intergenic 30.0%
GAAATTACAGAAATGGGAAA+AGG - Chr7:1466287-1466306 None:intergenic 30.0%
GAACTAGAAGAAGAAACATA+CGG + Chr7:1464274-1464293 MsG0780036024.01.T01:five_prime_UTR 30.0%
GAATCCTTATTCAAGTCATA+AGG - Chr7:1467870-1467889 None:intergenic 30.0%
GAGTTGTTTACACATTTCAA+TGG - Chr7:1467249-1467268 None:intergenic 30.0%
GATCTAGCAATGAATAAAGA+TGG + Chr7:1463193-1463212 MsG0780036024.01.T01:five_prime_UTR 30.0%
GCTGGATCTAATAAAAAAAG+AGG + Chr7:1468026-1468045 MsG0780036024.01.T01:CDS 30.0%
GTCAAAAAATTAGGGATCTA+TGG - Chr7:1463690-1463709 None:intergenic 30.0%
GTGTTTATCATAACCATATC+TGG - Chr7:1465970-1465989 None:intergenic 30.0%
GTTTCCTTATGACTTGAATA+AGG + Chr7:1467863-1467882 MsG0780036024.01.T01:intron 30.0%
TAATCATAACTTTGGGCAAA+GGG + Chr7:1467335-1467354 MsG0780036024.01.T01:intron 30.0%
TATATAATTGACTGGTAGGT+TGG + Chr7:1464310-1464329 MsG0780036024.01.T01:five_prime_UTR 30.0%
TATCACATCACATATCATCA+AGG - Chr7:1464977-1464996 None:intergenic 30.0%
TCAATCATTGTACACACTTT+AGG + Chr7:1467017-1467036 MsG0780036024.01.T01:intron 30.0%
TCTTTCTACAGTTTCTCTTT+CGG + Chr7:1466738-1466757 MsG0780036024.01.T01:intron 30.0%
TGAAATGTGTAAACAACTCA+AGG + Chr7:1467250-1467269 MsG0780036024.01.T01:intron 30.0%
TGAACAATGCTAATTTGGTT+TGG + Chr7:1468115-1468134 MsG0780036024.01.T01:CDS 30.0%
TGAATTTGAGAAAGCAAAAC+AGG + Chr7:1466695-1466714 MsG0780036024.01.T01:intron 30.0%
TTAATGCATGAGTGAATTGT+TGG + Chr7:1467547-1467566 MsG0780036024.01.T01:intron 30.0%
TTAGAAATTAAGGTGAAGTG+GGG + Chr7:1463077-1463096 MsG0780036024.01.T01:five_prime_UTR 30.0%
TTGAACCCTGAAAAGTTTAA+TGG - Chr7:1467765-1467784 None:intergenic 30.0%
TTGCCCAAAGTTATGATTAT+TGG - Chr7:1467334-1467353 None:intergenic 30.0%
TTTAGGCTCTTTATCCTTAT+GGG + Chr7:1468583-1468602 MsG0780036024.01.T01:three_prime_UTR 30.0%
TTTCCCATTTCTGTAATTTC+GGG + Chr7:1466287-1466306 MsG0780036024.01.T01:intron 30.0%
TTTCCCGAAATTACAGAAAT+GGG - Chr7:1466293-1466312 None:intergenic 30.0%
TTTGAACTTTCTTCCATAGT+TGG + Chr7:1468487-1468506 MsG0780036024.01.T01:three_prime_UTR 30.0%
! AATTTTGTAAGGTTGGGTTA+GGG - Chr7:1463371-1463390 None:intergenic 30.0%
! ACAAACCAATTTTGTAAGGT+TGG - Chr7:1463378-1463397 None:intergenic 30.0%
! ATATTTTGTCCAATATGGGT+GGG + Chr7:1463436-1463455 MsG0780036024.01.T01:five_prime_UTR 30.0%
! CAAACCAATTTTGTAAGGTT+GGG - Chr7:1463377-1463396 None:intergenic 30.0%
! CACGAAAATTTTCTATTCTC+TGG - Chr7:1467828-1467847 None:intergenic 30.0%
! CTGCTTGATTCGATAAAAAA+CGG + Chr7:1468516-1468535 MsG0780036024.01.T01:three_prime_UTR 30.0%
! CTTTTCCCTTCAAAAAACTA+AGG + Chr7:1463827-1463846 MsG0780036024.01.T01:five_prime_UTR 30.0%
! GATTTAGAGTAAGAGAATGA+GGG - Chr7:1467514-1467533 None:intergenic 30.0%
! GCATAACCATTAAACTTTTC+AGG + Chr7:1467756-1467775 MsG0780036024.01.T01:intron 30.0%
! GTATATTGATGATTGGTGAT+AGG + Chr7:1463316-1463335 MsG0780036024.01.T01:five_prime_UTR 30.0%
! TCATGTTTTGTGAATTTGCA+AGG - Chr7:1463755-1463774 None:intergenic 30.0%
! TGACTTTAAAAGTTGTGGAT+TGG + Chr7:1463563-1463582 MsG0780036024.01.T01:five_prime_UTR 30.0%
! TGATTTAGAGTAAGAGAATG+AGG - Chr7:1467515-1467534 None:intergenic 30.0%
! TGCTTGATTCGATAAAAAAC+GGG + Chr7:1468517-1468536 MsG0780036024.01.T01:three_prime_UTR 30.0%
! TGTTATAGTTTTCCTTCTCA+TGG - Chr7:1465402-1465421 None:intergenic 30.0%
! TTTTAGGCTCTTTATCCTTA+TGG + Chr7:1468582-1468601 MsG0780036024.01.T01:three_prime_UTR 30.0%
! TTTTGTATTGAATCGAGTAC+CGG - Chr7:1467139-1467158 None:intergenic 30.0%
!! ATATTTGGCTTTGTAGCATT+TGG + Chr7:1462810-1462829 MsG0780036024.01.T01:five_prime_UTR 30.0%
!! CTCCTTATGATGTTACTTTA+TGG + Chr7:1468241-1468260 MsG0780036024.01.T01:intron 30.0%
!! GTGTATTTTAGAAATTGGGT+TGG + Chr7:1463344-1463363 MsG0780036024.01.T01:five_prime_UTR 30.0%
!! TATTTGGCTTTGTAGCATTT+GGG + Chr7:1462811-1462830 MsG0780036024.01.T01:five_prime_UTR 30.0%
!!! ATCCACAACTTTTAAAGTCA+CGG - Chr7:1463563-1463582 None:intergenic 30.0%
!!! CTTAGTTTTTTGAAGGGAAA+AGG - Chr7:1463829-1463848 None:intergenic 30.0%
!!! GTTTTAAGGTTTAAAGTGGA+AGG - Chr7:1466994-1467013 None:intergenic 30.0%
!!! TATGGGATTATTTTGGTTGT+TGG + Chr7:1468600-1468619 MsG0780036024.01.T01:three_prime_UTR 30.0%
!!! TTCTTTTTAACTTATGCAGG+TGG + Chr7:1465501-1465520 MsG0780036024.01.T01:intron 30.0%
AAATATGCTCCAGCATATGT+AGG + Chr7:1466087-1466106 MsG0780036024.01.T01:intron 35.0%
AACAACAATCAAGCCTTAAG+TGG - Chr7:1466022-1466041 None:intergenic 35.0%
AAGCTGCATATGCATGAATA+AGG - Chr7:1466671-1466690 None:intergenic 35.0%
AATATGCTCCAGCATATGTA+GGG + Chr7:1466088-1466107 MsG0780036024.01.T01:intron 35.0%
AATCATAACTTTGGGCAAAG+GGG + Chr7:1467336-1467355 MsG0780036024.01.T01:intron 35.0%
AATGTACAAACGATTCCCAT+CGG + Chr7:1462472-1462491 MsG0780036024.01.T01:five_prime_UTR 35.0%
ACACCATTAGAGAGAGATTT+GGG + Chr7:1465760-1465779 MsG0780036024.01.T01:intron 35.0%
AGAACTCACATCAAGTAGTA+TGG + Chr7:1463483-1463502 MsG0780036024.01.T01:five_prime_UTR 35.0%
AGATGGTAGAAAATAGGCTA+AGG + Chr7:1465800-1465819 MsG0780036024.01.T01:intron 35.0%
AGATTTAGAGGTTAACGAGT+TGG + Chr7:1465942-1465961 MsG0780036024.01.T01:intron 35.0%
AGCTGTTTAGTATCATGGTA+AGG + Chr7:1466946-1466965 MsG0780036024.01.T01:intron 35.0%
ATATGTGATGTGATACTGCA+AGG + Chr7:1464982-1465001 MsG0780036024.01.T01:intron 35.0%
ATCAAACCTAAAGGTTAGTG+TGG + Chr7:1467706-1467725 MsG0780036024.01.T01:intron 35.0%
ATGACATGTGATGTGGATAA+GGG + Chr7:1464406-1464425 MsG0780036024.01.T01:five_prime_UTR 35.0%
ATGGGAATCGTTTGTACATT+CGG - Chr7:1462472-1462491 None:intergenic 35.0%
ATGTTTGTAGGCGATAGTTA+GGG - Chr7:1463248-1463267 None:intergenic 35.0%
ATTCATGCATATGCAGCTTA+CGG + Chr7:1466672-1466691 MsG0780036024.01.T01:intron 35.0%
CAATATGTCATGCTTCATAC+AGG - Chr7:1467933-1467952 None:intergenic 35.0%
CAATCCAAATTGCAAATGTG+TGG - Chr7:1468001-1468020 None:intergenic 35.0%
CACACATTTGCAATTTGGAT+TGG + Chr7:1467999-1468018 MsG0780036024.01.T01:CDS 35.0%
CATGTAAAACTCAAAACGCA+TGG - Chr7:1467737-1467756 None:intergenic 35.0%
CCATGATACTAAACAGCTTT+AGG - Chr7:1466944-1466963 None:intergenic 35.0%
CCTAAAGCTGTTTAGTATCA+TGG + Chr7:1466941-1466960 MsG0780036024.01.T01:intron 35.0%
CGGAAATTATTACGACAAAG+GGG - Chr7:1462757-1462776 None:intergenic 35.0%
CGTTACGATTTCAAGAGAAA+TGG + Chr7:1466437-1466456 MsG0780036024.01.T01:CDS 35.0%
CTAAAAATAGCAGGCTAAAC+GGG - Chr7:1468451-1468470 None:intergenic 35.0%
CTAACCCAACCTTACAAAAT+TGG + Chr7:1463370-1463389 MsG0780036024.01.T01:five_prime_UTR 35.0%
CTAGAACAACCTGTAATGTT+AGG - Chr7:1466794-1466813 None:intergenic 35.0%
CTCACGTAGCTATCTATATA+AGG - Chr7:1468168-1468187 None:intergenic 35.0%
CTGTATGAAGCATGACATAT+TGG + Chr7:1467931-1467950 MsG0780036024.01.T01:intron 35.0%
CTTATATAGATAGCTACGTG+AGG + Chr7:1468166-1468185 MsG0780036024.01.T01:CDS 35.0%
GAACTCACATCAAGTAGTAT+GGG + Chr7:1463484-1463503 MsG0780036024.01.T01:five_prime_UTR 35.0%
GAATCGCCGTCAAAAAATTA+GGG - Chr7:1463698-1463717 None:intergenic 35.0%
GCTAAAAATAGCAGGCTAAA+CGG - Chr7:1468452-1468471 None:intergenic 35.0%
GCTGTATACAATACACCAAA+TGG - Chr7:1466131-1466150 None:intergenic 35.0%
GGATATTATGACATGTGATG+TGG + Chr7:1464399-1464418 MsG0780036024.01.T01:five_prime_UTR 35.0%
GTAGTACAAAAAGTAGCAGA+TGG + Chr7:1465859-1465878 MsG0780036024.01.T01:intron 35.0%
TAAGTTCGTCACCTCTAATT+TGG - Chr7:1464928-1464947 None:intergenic 35.0%
TACTAACAAGGAAACAATCG+TGG + Chr7:1463994-1464013 MsG0780036024.01.T01:five_prime_UTR 35.0%
TAGCGAAATGCATTTATCTC+CGG - Chr7:1464203-1464222 None:intergenic 35.0%
TATGACATGTGATGTGGATA+AGG + Chr7:1464405-1464424 MsG0780036024.01.T01:five_prime_UTR 35.0%
TATGTTTGTAGGCGATAGTT+AGG - Chr7:1463249-1463268 None:intergenic 35.0%
TATTGGTCGCATGTATGTAT+AGG + Chr7:1467948-1467967 MsG0780036024.01.T01:intron 35.0%
TCACGAATCATAGGACAAAA+TGG - Chr7:1462555-1462574 None:intergenic 35.0%
TGAATCGCCGTCAAAAAATT+AGG - Chr7:1463699-1463718 None:intergenic 35.0%
TGCTTGTGAATACATACTAG+CGG + Chr7:1464454-1464473 MsG0780036024.01.T01:five_prime_UTR 35.0%
TGGAAAGAATATGCACTTCT+TGG + Chr7:1468135-1468154 MsG0780036024.01.T01:CDS 35.0%
TGGTATGGACAAACAAACAA+TGG + Chr7:1463152-1463171 MsG0780036024.01.T01:five_prime_UTR 35.0%
TGTAAAACTCAAAACGCATG+GGG - Chr7:1467735-1467754 None:intergenic 35.0%
TGTGATAAAATGTGTGAAGC+AGG + Chr7:1465539-1465558 MsG0780036024.01.T01:CDS 35.0%
TTGATATGGCACAAACAGAT+AGG - Chr7:1468089-1468108 None:intergenic 35.0%
TTGGAGGAAATCAAGAAAGT+TGG + Chr7:1466906-1466925 MsG0780036024.01.T01:intron 35.0%
! AAGTAGCTTTTCATACGTAG+AGG - Chr7:1465288-1465307 None:intergenic 35.0%
! CAATTTTGTAAGGTTGGGTT+AGG - Chr7:1463372-1463391 None:intergenic 35.0%
! CATATTTTGTCCAATATGGG+TGG + Chr7:1463435-1463454 MsG0780036024.01.T01:five_prime_UTR 35.0%
! GCTTGATTCGATAAAAAACG+GGG + Chr7:1468518-1468537 MsG0780036024.01.T01:three_prime_UTR 35.0%
! GGAAACATAACTGATTTACG+CGG + Chr7:1464475-1464494 MsG0780036024.01.T01:five_prime_UTR 35.0%
! GGTGTTTTCTCTCATATGAA+GGG + Chr7:1467395-1467414 MsG0780036024.01.T01:intron 35.0%
! TACCGTGACTTTAAAAGTTG+TGG + Chr7:1463558-1463577 MsG0780036024.01.T01:five_prime_UTR 35.0%
! TAGAATGTATCACGCACTTT+TGG + Chr7:1468267-1468286 MsG0780036024.01.T01:intron 35.0%
! TGCTTTTAGTATCGCTTTCT+TGG - Chr7:1465131-1465150 None:intergenic 35.0%
! TTGTTGTTGTTGCTCATCAA+TGG - Chr7:1464048-1464067 None:intergenic 35.0%
! TTTTAGTATCGCTTTCTTGG+TGG - Chr7:1465128-1465147 None:intergenic 35.0%
!! ATGGAAGATTTACTGGCTTT+CGG + Chr7:1466456-1466475 MsG0780036024.01.T01:CDS 35.0%
!! TCTTCTAGTTCTAGTGTAAC+TGG - Chr7:1464265-1464284 None:intergenic 35.0%
!!! AAGCTACTTTTGTATTGCTG+TGG + Chr7:1465299-1465318 MsG0780036024.01.T01:CDS 35.0%
!!! CTTTTAAAGTCACGGTATTG+AGG - Chr7:1463555-1463574 None:intergenic 35.0%
!!! GTTTAGCCTGCTATTTTTAG+CGG + Chr7:1468451-1468470 MsG0780036024.01.T01:three_prime_UTR 35.0%
!!! TGTTGCAGAAAGCTACTTTT+TGG + Chr7:1464564-1464583 MsG0780036024.01.T01:intron 35.0%
!!! TTTAGCCTGCTATTTTTAGC+GGG + Chr7:1468452-1468471 MsG0780036024.01.T01:three_prime_UTR 35.0%
AAAAAGTAGCAGATGGAGGA+GGG + Chr7:1465866-1465885 MsG0780036024.01.T01:intron 40.0%
AACAATCGTGGATAAAACCG+TGG + Chr7:1464006-1464025 MsG0780036024.01.T01:five_prime_UTR 40.0%
AACAGCTATGTCCTTTGACA+AGG - Chr7:1466769-1466788 None:intergenic 40.0%
AAGGTTGCAAAATGGTTCTC+CGG + Chr7:1467117-1467136 MsG0780036024.01.T01:intron 40.0%
AATATGTTGCGTTGGATGAG+TGG + Chr7:1465708-1465727 MsG0780036024.01.T01:intron 40.0%
AATCAAGCCTTAAGTGGAGT+GGG - Chr7:1466016-1466035 None:intergenic 40.0%
AATGTAACCCACTCCACTTA+AGG + Chr7:1466006-1466025 MsG0780036024.01.T01:intron 40.0%
ACAAAACTTCTTCTGCGAAG+TGG - Chr7:1466646-1466665 None:intergenic 40.0%
AGCTGTTGTCCTAACATTAC+AGG + Chr7:1466782-1466801 MsG0780036024.01.T01:intron 40.0%
AGGAACTCATTGTATCCTGA+AGG + Chr7:1467630-1467649 MsG0780036024.01.T01:intron 40.0%
AGTGAAACTGCTGATAGAGA+AGG + Chr7:1464167-1464186 MsG0780036024.01.T01:five_prime_UTR 40.0%
ATACTGTTAGGAGATACGCT+TGG + Chr7:1467585-1467604 MsG0780036024.01.T01:intron 40.0%
ATATAGATAGCTACGTGAGG+TGG + Chr7:1468169-1468188 MsG0780036024.01.T01:intron 40.0%
ATCCTAAGCTCACGAATCAT+AGG - Chr7:1462564-1462583 None:intergenic 40.0%
ATGTAATTTACACGGCGAGT+TGG + Chr7:1467047-1467066 MsG0780036024.01.T01:intron 40.0%
CACCATTAGAGAGAGATTTG+GGG + Chr7:1465761-1465780 MsG0780036024.01.T01:intron 40.0%
CATGAGCAAACTGATAGCTA+TGG + Chr7:1463589-1463608 MsG0780036024.01.T01:five_prime_UTR 40.0%
CTTCTATCACTTACAGTCTG+TGG - Chr7:1462711-1462730 None:intergenic 40.0%
CTTTGCACAATATGTTGCGT+TGG + Chr7:1465700-1465719 MsG0780036024.01.T01:intron 40.0%
GAACTCATTGTATCCTGAAG+GGG + Chr7:1467632-1467651 MsG0780036024.01.T01:intron 40.0%
GACACCATTAGAGAGAGATT+TGG + Chr7:1465759-1465778 MsG0780036024.01.T01:intron 40.0%
GACATTCTATTGAAGGAGCA+AGG - Chr7:1468056-1468075 None:intergenic 40.0%
GGAACTCATTGTATCCTGAA+GGG + Chr7:1467631-1467650 MsG0780036024.01.T01:intron 40.0%
GGAATCATAACGAACAAGAG+TGG - Chr7:1464105-1464124 None:intergenic 40.0%
GTACAAAAAGTAGCAGATGG+AGG + Chr7:1465862-1465881 MsG0780036024.01.T01:intron 40.0%
GTGAAACTGCTGATAGAGAA+GGG + Chr7:1464168-1464187 MsG0780036024.01.T01:five_prime_UTR 40.0%
TACAGATTGCATTTCCTGAC+TGG - Chr7:1465576-1465595 None:intergenic 40.0%
TACCCCAAATCTCTCTCTAA+TGG - Chr7:1465766-1465785 None:intergenic 40.0%
TATAGATAGCTACGTGAGGT+GGG + Chr7:1468170-1468189 MsG0780036024.01.T01:intron 40.0%
TCATAGAGTCATCCATGAGA+AGG + Chr7:1465387-1465406 MsG0780036024.01.T01:intron 40.0%
TCCTCCAACAAAACAATGCT+CGG - Chr7:1466894-1466913 None:intergenic 40.0%
TGGTAGAAAATAGGCTAAGG+TGG + Chr7:1465803-1465822 MsG0780036024.01.T01:intron 40.0%
TGGTTGTGCAATACACATCA+AGG + Chr7:1467610-1467629 MsG0780036024.01.T01:intron 40.0%
TTCGTTATGATTCCAGTGCA+TGG + Chr7:1464111-1464130 MsG0780036024.01.T01:five_prime_UTR 40.0%
TTGGGTTCAAGGTTGCAAAA+TGG + Chr7:1467109-1467128 MsG0780036024.01.T01:intron 40.0%
TTGTACATTCGGAACGAAGA+AGG - Chr7:1462461-1462480 None:intergenic 40.0%
! AAAGCAACTTTTCTGCTGCT+TGG - Chr7:1464713-1464732 None:intergenic 40.0%
! ATCACTGCACTTGGACATTT+TGG - Chr7:1464857-1464876 None:intergenic 40.0%
! GGGTGTTTTCTCTCATATGA+AGG + Chr7:1467394-1467413 MsG0780036024.01.T01:intron 40.0%
! GTATGTATTCACAAGCATCG+CGG - Chr7:1464451-1464470 None:intergenic 40.0%
! TAACGAGTTGGATCCAGATA+TGG + Chr7:1465954-1465973 MsG0780036024.01.T01:intron 40.0%
! TTCTTGGTGGCAGTAAACAT+GGG - Chr7:1465115-1465134 None:intergenic 40.0%
! TTTCTTGGTGGCAGTAAACA+TGG - Chr7:1465116-1465135 None:intergenic 40.0%
! TTTTCATACGTAGAGGATGC+AGG - Chr7:1465281-1465300 None:intergenic 40.0%
!! TTCTTTCTGACTTGCTGATC+CGG + Chr7:1462615-1462634 MsG0780036024.01.T01:five_prime_UTR 40.0%
!! TTGTCCGAGCATTGTTTTGT+TGG + Chr7:1466887-1466906 MsG0780036024.01.T01:intron 40.0%
!!! TGTAAAGTTTTAGGGAGCCT+TGG - Chr7:1466241-1466260 None:intergenic 40.0%
ACAACTTTACCGTTGCTCCA+AGG + Chr7:1466221-1466240 MsG0780036024.01.T01:intron 45.0%
AGCATATGTAGGGACCAAGA+AGG + Chr7:1466098-1466117 MsG0780036024.01.T01:intron 45.0%
ATCATGGAGTTTGCGGGATA+AGG - Chr7:1463925-1463944 None:intergenic 45.0%
ATCCAGATCATCACTGCACT+TGG - Chr7:1464866-1464885 None:intergenic 45.0%
ATGACCAACAAATCCCCTTC+AGG - Chr7:1467648-1467667 None:intergenic 45.0%
CAAAAAGTAGCAGATGGAGG+AGG + Chr7:1465865-1465884 MsG0780036024.01.T01:intron 45.0%
CAAACTCCATGATGCTCCTT+CGG + Chr7:1463932-1463951 MsG0780036024.01.T01:five_prime_UTR 45.0%
CAATCAAGCCTTAAGTGGAG+TGG - Chr7:1466017-1466036 None:intergenic 45.0%
CAGTGCATGGTTCGTCAATA+GGG + Chr7:1464124-1464143 MsG0780036024.01.T01:five_prime_UTR 45.0%
CATATGTAGGGACCAAGAAG+GGG + Chr7:1466100-1466119 MsG0780036024.01.T01:intron 45.0%
CATCATTGATCTGCACTGCA+AGG - Chr7:1463799-1463818 None:intergenic 45.0%
CTCAACCCGCTAAAAATAGC+AGG - Chr7:1468460-1468479 None:intergenic 45.0%
GAAGGACAGCTTCGTCAAAA+TGG + Chr7:1468366-1468385 MsG0780036024.01.T01:CDS 45.0%
GAGAAGGGTGAGGATAGATA+TGG + Chr7:1463132-1463151 MsG0780036024.01.T01:five_prime_UTR 45.0%
GATCAACGCATACAGTGAAG+TGG + Chr7:1466813-1466832 MsG0780036024.01.T01:intron 45.0%
GATGAGTGGTAAGACTAGAC+AGG + Chr7:1465722-1465741 MsG0780036024.01.T01:intron 45.0%
GATTCGATAAAAAACGGGGC+AGG + Chr7:1468522-1468541 MsG0780036024.01.T01:three_prime_UTR 45.0%
GATTGCATTTCCTGACTGGA+AGG - Chr7:1465572-1465591 None:intergenic 45.0%
GCATATGTAGGGACCAAGAA+GGG + Chr7:1466099-1466118 MsG0780036024.01.T01:intron 45.0%
GGGTCCACACATTTGCAATT+TGG + Chr7:1467994-1468013 MsG0780036024.01.T01:CDS 45.0%
GGGTGAGGATAGATATGGTA+TGG + Chr7:1463137-1463156 MsG0780036024.01.T01:five_prime_UTR 45.0%
GTAACCTCTGTACAAAGCCA+CGG - Chr7:1464026-1464045 None:intergenic 45.0%
GTACACGTATCCGATACGTA+GGG + Chr7:1468394-1468413 MsG0780036024.01.T01:CDS 45.0%
GTATCCTGAAGGGGATTTGT+TGG + Chr7:1467641-1467660 MsG0780036024.01.T01:intron 45.0%
GTATTGCTGTGGTCAGAACA+AGG + Chr7:1465310-1465329 MsG0780036024.01.T01:CDS 45.0%
GTCCTATGATTCGTGAGCTT+AGG + Chr7:1462559-1462578 MsG0780036024.01.T01:five_prime_UTR 45.0%
GTGGATAAGGGTTAATGACG+AGG + Chr7:1464418-1464437 MsG0780036024.01.T01:five_prime_UTR 45.0%
TACACGTATCCGATACGTAG+GGG + Chr7:1468395-1468414 MsG0780036024.01.T01:CDS 45.0%
TCATGGAGTTTGCGGGATAA+GGG - Chr7:1463924-1463943 None:intergenic 45.0%
TCCATTTCTGCTCCATGTAG+CGG + Chr7:1462421-1462440 MsG0780036024.01.T01:five_prime_UTR 45.0%
TCCTATTGTTTCCGCTCTGA+AGG + Chr7:1468348-1468367 MsG0780036024.01.T01:CDS 45.0%
TCCTTCAGAGCGGAAACAAT+AGG - Chr7:1468352-1468371 None:intergenic 45.0%
TCTTGAAATCGTAACGGCGA+TGG - Chr7:1466433-1466452 None:intergenic 45.0%
TCTTTGTGAAAGTGACCGCA+AGG + Chr7:1464588-1464607 MsG0780036024.01.T01:five_prime_UTR 45.0%
TGGAGGCGAATCAAACCTAA+AGG + Chr7:1467697-1467716 MsG0780036024.01.T01:intron 45.0%
TGTACACGTATCCGATACGT+AGG + Chr7:1468393-1468412 MsG0780036024.01.T01:CDS 45.0%
TTCTTGGTCCCTACATATGC+TGG - Chr7:1466099-1466118 None:intergenic 45.0%
TTTCGGAGTGACCTTGTCAA+AGG + Chr7:1466755-1466774 MsG0780036024.01.T01:intron 45.0%
! GCAATTTGGATTGGACTTGC+TGG + Chr7:1468008-1468027 MsG0780036024.01.T01:CDS 45.0%
! GGTGGGCTTGATAGGTATTA+TGG + Chr7:1463453-1463472 MsG0780036024.01.T01:five_prime_UTR 45.0%
!! AAAACCGTGGCTTTGTACAG+AGG + Chr7:1464019-1464038 MsG0780036024.01.T01:five_prime_UTR 45.0%
!! AAGGAGCATCATGGAGTTTG+CGG - Chr7:1463932-1463951 None:intergenic 45.0%
!! TCCGAGCATTGTTTTGTTGG+AGG + Chr7:1466890-1466909 MsG0780036024.01.T01:intron 45.0%
!! TGAGACGAGAGGTACTAACA+AGG + Chr7:1463982-1464001 MsG0780036024.01.T01:five_prime_UTR 45.0%
AAATAGCAGGCTAAACGGGC+CGG - Chr7:1468447-1468466 None:intergenic 50.0%
ACTGCTGATAGAGAAGGGCT+AGG + Chr7:1464173-1464192 MsG0780036024.01.T01:five_prime_UTR 50.0%
ACTTACAAGTTGCTGGCCGA+TGG - Chr7:1462491-1462510 None:intergenic 50.0%
AGACGACAGAGGTAGAGAGA+AGG + Chr7:1463116-1463135 MsG0780036024.01.T01:five_prime_UTR 50.0%
AGAGGGTCTTCTCCTATGCA+CGG + Chr7:1467070-1467089 MsG0780036024.01.T01:intron 50.0%
AGTGGCGAAGATTGGGTTCA+AGG + Chr7:1467098-1467117 MsG0780036024.01.T01:intron 50.0%
AGTTTGCGGGATAAGGGGAT+AGG - Chr7:1463918-1463937 None:intergenic 50.0%
ATAAAAAACGGGGCAGGCAC+GGG + Chr7:1468528-1468547 MsG0780036024.01.T01:three_prime_UTR 50.0%
CAAATGGCATGACCCCTTCT+TGG - Chr7:1466115-1466134 None:intergenic 50.0%
CAAGAAGGGGTCATGCCATT+TGG + Chr7:1466113-1466132 MsG0780036024.01.T01:intron 50.0%
CAAGCAGTGCGAACCAACTA+TGG - Chr7:1468503-1468522 None:intergenic 50.0%
CATGGAGTTTGCGGGATAAG+GGG - Chr7:1463923-1463942 None:intergenic 50.0%
CCAGTGCATGGTTCGTCAAT+AGG + Chr7:1464123-1464142 MsG0780036024.01.T01:five_prime_UTR 50.0%
CCTATCAAGCCCACCCATAT+TGG - Chr7:1463448-1463467 None:intergenic 50.0%
CCTATTGACGAACCATGCAC+TGG - Chr7:1464126-1464145 None:intergenic 50.0%
CTTACAAGTTGCTGGCCGAT+GGG - Chr7:1462490-1462509 None:intergenic 50.0%
GACATCCTGCATGTGGTCTA+TGG - Chr7:1463223-1463242 None:intergenic 50.0%
GACGACAGAGGTAGAGAGAA+GGG + Chr7:1463117-1463136 MsG0780036024.01.T01:five_prime_UTR 50.0%
GACGCGAACTTACAAGTTGC+TGG - Chr7:1462498-1462517 None:intergenic 50.0%
GATAAAAAACGGGGCAGGCA+CGG + Chr7:1468527-1468546 MsG0780036024.01.T01:three_prime_UTR 50.0%
GATACGTAGGGGTGGCAAAA+CGG + Chr7:1468406-1468425 MsG0780036024.01.T01:exon 50.0%
GCATCCGAAATCTGTCCTTG+CGG - Chr7:1464606-1464625 None:intergenic 50.0%
GCATGGTTCGTCAATAGGGT+TGG + Chr7:1464128-1464147 MsG0780036024.01.T01:five_prime_UTR 50.0%
GGAGTTGAGTGGCGAAGATT+GGG + Chr7:1467091-1467110 MsG0780036024.01.T01:intron 50.0%
GGGTTGCCACACTAACCTTT+AGG - Chr7:1467715-1467734 None:intergenic 50.0%
GTCCAAGTGCAGTGATGATC+TGG + Chr7:1464861-1464880 MsG0780036024.01.T01:intron 50.0%
GTCTACCATAGACCACATGC+AGG + Chr7:1463215-1463234 MsG0780036024.01.T01:five_prime_UTR 50.0%
GTCTCATCTCTTGCATCGCA+CGG + Chr7:1466860-1466879 MsG0780036024.01.T01:intron 50.0%
GTGACCGCAAGGACAGATTT+CGG + Chr7:1464599-1464618 MsG0780036024.01.T01:five_prime_UTR 50.0%
GTTTGCGGGATAAGGGGATA+GGG - Chr7:1463917-1463936 None:intergenic 50.0%
TAAGGTGAAGTGGGGTCCAT+GGG + Chr7:1463085-1463104 MsG0780036024.01.T01:five_prime_UTR 50.0%
TAGGGTAGACATCCTGCATG+TGG - Chr7:1463230-1463249 None:intergenic 50.0%
TCCATGATGCTCCTTCGGTT+AGG + Chr7:1463937-1463956 MsG0780036024.01.T01:five_prime_UTR 50.0%
TCCGCTACATGGAGCAGAAA+TGG - Chr7:1462425-1462444 None:intergenic 50.0%
TCCTGAAGCTTCCTAACCGA+AGG - Chr7:1463951-1463970 None:intergenic 50.0%
TCCTTCGGTTAGGAAGCTTC+AGG + Chr7:1463947-1463966 MsG0780036024.01.T01:five_prime_UTR 50.0%
TCTCATCTCTTGCATCGCAC+GGG + Chr7:1466861-1466880 MsG0780036024.01.T01:intron 50.0%
TGGTTCGTCAATAGGGTTGG+CGG + Chr7:1464131-1464150 MsG0780036024.01.T01:five_prime_UTR 50.0%
TTAAGGTGAAGTGGGGTCCA+TGG + Chr7:1463084-1463103 MsG0780036024.01.T01:five_prime_UTR 50.0%
TTTAGGGAGCCTTGGAGCAA+CGG - Chr7:1466233-1466252 None:intergenic 50.0%
! AGGCTTTATGCCTTCCAGTC+AGG + Chr7:1465559-1465578 MsG0780036024.01.T01:CDS 50.0%
! ATTTACACGGCGAGTTGGAG+AGG + Chr7:1467052-1467071 MsG0780036024.01.T01:intron 50.0%
! CCAATATGGGTGGGCTTGAT+AGG + Chr7:1463445-1463464 MsG0780036024.01.T01:five_prime_UTR 50.0%
! GTATCACGCACTTTTGGCCT+CGG + Chr7:1468273-1468292 MsG0780036024.01.T01:CDS 50.0%
! GTTAGGAGATACGCTTGGTG+TGG + Chr7:1467590-1467609 MsG0780036024.01.T01:intron 50.0%
! GTTTTGCCACCCCTACGTAT+CGG - Chr7:1468407-1468426 None:intergenic 50.0%
! TATCACGCACTTTTGGCCTC+GGG + Chr7:1468274-1468293 MsG0780036024.01.T01:CDS 50.0%
! TCAGGCAAACGCAAAGCATC+CGG - Chr7:1462637-1462656 None:intergenic 50.0%
! TTCACAAGCATCGCGGATCA+TGG - Chr7:1464444-1464463 None:intergenic 50.0%
! TTTACACGGCGAGTTGGAGA+GGG + Chr7:1467053-1467072 MsG0780036024.01.T01:intron 50.0%
!! AGGAGCATCATGGAGTTTGC+GGG - Chr7:1463931-1463950 None:intergenic 50.0%
!! TCCTAACCGAAGGAGCATCA+TGG - Chr7:1463941-1463960 None:intergenic 50.0%
AACCAGCTCACACGAACCTG+CGG - Chr7:1462597-1462616 None:intergenic 55.0%
AAGTAGCAGATGGAGGAGGG+TGG + Chr7:1465869-1465888 MsG0780036024.01.T01:intron 55.0%
AAGTGCAGGTGTCCGCTACA+TGG - Chr7:1462436-1462455 None:intergenic 55.0%
AATAGCAGGCTAAACGGGCC+GGG - Chr7:1468446-1468465 None:intergenic 55.0%
ACGGCGATGGCGACTTAAGA+TGG - Chr7:1466420-1466439 None:intergenic 55.0%
ACGTATCCGATACGTAGGGG+TGG + Chr7:1468398-1468417 MsG0780036024.01.T01:exon 55.0%
AGCAGATCTGTGATCTCCCG+AGG - Chr7:1468293-1468312 None:intergenic 55.0%
AGTAGCAGATGGAGGAGGGT+GGG + Chr7:1465870-1465889 MsG0780036024.01.T01:intron 55.0%
CAGAGGTAGAGAGAAGGGTG+AGG + Chr7:1463122-1463141 MsG0780036024.01.T01:five_prime_UTR 55.0%
CGACGCTTCAATGAGACGAG+AGG + Chr7:1463971-1463990 MsG0780036024.01.T01:five_prime_UTR 55.0%
CGGAGTTGAGTGGCGAAGAT+TGG + Chr7:1467090-1467109 MsG0780036024.01.T01:intron 55.0%
CTCCTATGCACGGAGTTGAG+TGG + Chr7:1467080-1467099 MsG0780036024.01.T01:intron 55.0%
GAACGAAGAAGGCGAAGTGC+AGG - Chr7:1462450-1462469 None:intergenic 55.0%
GACGAAGCTGTCCTTCAGAG+CGG - Chr7:1468362-1468381 None:intergenic 55.0%
GAGGAGGGTGGGATCAAAAG+AGG + Chr7:1465881-1465900 MsG0780036024.01.T01:intron 55.0%
GCACTGCAAGGAGTGAAGCA+AGG - Chr7:1463787-1463806 None:intergenic 55.0%
GGAGGCTGCACGTTGGATAA+TGG + Chr7:1462674-1462693 MsG0780036024.01.T01:five_prime_UTR 55.0%
TAGAGAAGGGCTAGGTCGAC+CGG + Chr7:1464181-1464200 MsG0780036024.01.T01:five_prime_UTR 55.0%
TGTCGTCTTCGATCCTCCCA+TGG - Chr7:1463104-1463123 None:intergenic 55.0%
! GGTTCGTCAATAGGGTTGGC+GGG + Chr7:1464132-1464151 MsG0780036024.01.T01:five_prime_UTR 55.0%
! GTTCGTCAATAGGGTTGGCG+GGG + Chr7:1464133-1464152 MsG0780036024.01.T01:five_prime_UTR 55.0%
! TAGGATGCTGATTGTCCCGC+AGG + Chr7:1462578-1462597 MsG0780036024.01.T01:five_prime_UTR 55.0%
ACCAGCTCACACGAACCTGC+GGG - Chr7:1462596-1462615 None:intergenic 60.0%
AGAGAAAGCCGCCATGCTGG+AGG + Chr7:1462656-1462675 MsG0780036024.01.T01:five_prime_UTR 60.0%
CAGCATGGCGGCTTTCTCTC+AGG - Chr7:1462655-1462674 None:intergenic 60.0%
CGCCACTCAACTCCGTGCAT+AGG - Chr7:1467085-1467104 None:intergenic 60.0%
CTGAGAGAAAGCCGCCATGC+TGG + Chr7:1462653-1462672 MsG0780036024.01.T01:five_prime_UTR 60.0%
GGGAGGATCGAAGACGACAG+AGG + Chr7:1463105-1463124 MsG0780036024.01.T01:five_prime_UTR 60.0%
ACGTGCAGCCTCCAGCATGG+CGG - Chr7:1462667-1462686 None:intergenic 65.0%
CCAACGTGCAGCCTCCAGCA+TGG - Chr7:1462670-1462689 None:intergenic 65.0%
CCATGCTGGAGGCTGCACGT+TGG + Chr7:1462667-1462686 MsG0780036024.01.T01:five_prime_UTR 65.0%
GGTGAAGTGGGGTCCATGGG+AGG + Chr7:1463088-1463107 MsG0780036024.01.T01:five_prime_UTR 65.0%
TCCCGCAGGTTCGTGTGAGC+TGG + Chr7:1462592-1462611 MsG0780036024.01.T01:five_prime_UTR 65.0%
AAAACGGGGCAGGCACGGGC+AGG + Chr7:1468532-1468551 MsG0780036024.01.T01:three_prime_UTR 70.0%
AAACGGGGCAGGCACGGGCA+GGG + Chr7:1468533-1468552 MsG0780036024.01.T01:three_prime_UTR 70.0%
ACGGATCCAACCCGCCAGCC+CGG + Chr7:1468425-1468444 MsG0780036024.01.T01:three_prime_UTR 70.0%
GCAGGCTAAACGGGCCGGGC+TGG - Chr7:1468442-1468461 None:intergenic 75.0%
! GGCTAAACGGGCCGGGCTGG+CGG - Chr7:1468439-1468458 None:intergenic 75.0%
!! GCTAAACGGGCCGGGCTGGC+GGG - Chr7:1468438-1468457 None:intergenic 75.0%
!!! AACGGGCCGGGCTGGCGGGT+TGG - Chr7:1468434-1468453 None:intergenic 80.0%
! CGGGGCAGGCACGGGCAGGG+CGG + Chr7:1468536-1468555 MsG0780036024.01.T01:three_prime_UTR 85.0%
! GGGGCAGGCACGGGCAGGGC+GGG + Chr7:1468537-1468556 MsG0780036024.01.T01:three_prime_UTR 85.0%
Chromosome Type Strat End Strand Name
Chr7 gene 1462391 1468729 1462391 ID=MsG0780036024.01;Name=MsG0780036024.01
Chr7 mRNA 1462391 1468729 1462391 ID=MsG0780036024.01.T01;Parent=MsG0780036024.01;Name=MsG0780036024.01.T01;_AED=0.49;_eAED=0.50;_QI=2352|0.55|0.6|1|0.22|0.3|10|315|251
Chr7 exon 1462391 1462730 1462391 ID=MsG0780036024.01.T01:exon:6515;Parent=MsG0780036024.01.T01
Chr7 exon 1462800 1464496 1462800 ID=MsG0780036024.01.T01:exon:6516;Parent=MsG0780036024.01.T01
Chr7 exon 1464572 1464755 1464572 ID=MsG0780036024.01.T01:exon:6517;Parent=MsG0780036024.01.T01
Chr7 exon 1464873 1464935 1464873 ID=MsG0780036024.01.T01:exon:6518;Parent=MsG0780036024.01.T01
Chr7 exon 1465226 1465331 1465226 ID=MsG0780036024.01.T01:exon:6519;Parent=MsG0780036024.01.T01
Chr7 exon 1465520 1465644 1465520 ID=MsG0780036024.01.T01:exon:6520;Parent=MsG0780036024.01.T01
Chr7 exon 1466350 1466504 1466350 ID=MsG0780036024.01.T01:exon:6521;Parent=MsG0780036024.01.T01
Chr7 exon 1467778 1467852 1467778 ID=MsG0780036024.01.T01:exon:6522;Parent=MsG0780036024.01.T01
Chr7 exon 1467970 1468187 1467970 ID=MsG0780036024.01.T01:exon:6523;Parent=MsG0780036024.01.T01
Chr7 exon 1468270 1468729 1468270 ID=MsG0780036024.01.T01:exon:6524;Parent=MsG0780036024.01.T01
Chr7 five_prime_UTR 1462391 1462730 1462391 ID=MsG0780036024.01.T01:five_prime_utr;Parent=MsG0780036024.01.T01
Chr7 five_prime_UTR 1462800 1464496 1462800 ID=MsG0780036024.01.T01:five_prime_utr;Parent=MsG0780036024.01.T01
Chr7 five_prime_UTR 1464572 1464755 1464572 ID=MsG0780036024.01.T01:five_prime_utr;Parent=MsG0780036024.01.T01
Chr7 five_prime_UTR 1464873 1464935 1464873 ID=MsG0780036024.01.T01:five_prime_utr;Parent=MsG0780036024.01.T01
Chr7 five_prime_UTR 1465226 1465293 1465226 ID=MsG0780036024.01.T01:five_prime_utr;Parent=MsG0780036024.01.T01
Chr7 CDS 1465294 1465331 1465294 ID=MsG0780036024.01.T01:cds;Parent=MsG0780036024.01.T01
Chr7 CDS 1465520 1465644 1465520 ID=MsG0780036024.01.T01:cds;Parent=MsG0780036024.01.T01
Chr7 CDS 1466350 1466504 1466350 ID=MsG0780036024.01.T01:cds;Parent=MsG0780036024.01.T01
Chr7 CDS 1467778 1467852 1467778 ID=MsG0780036024.01.T01:cds;Parent=MsG0780036024.01.T01
Chr7 CDS 1467970 1468187 1467970 ID=MsG0780036024.01.T01:cds;Parent=MsG0780036024.01.T01
Chr7 CDS 1468270 1468414 1468270 ID=MsG0780036024.01.T01:cds;Parent=MsG0780036024.01.T01
Chr7 three_prime_UTR 1468415 1468729 1468415 ID=MsG0780036024.01.T01:three_prime_utr;Parent=MsG0780036024.01.T01
Chr7 mRNA 1464551 1464979 1464551 ID=MsG0780036024.01.T02;Parent=MsG0780036024.01;Name=MsG0780036024.01.T02;_AED=0.50;_eAED=1.00;_QI=0|0|0|1|0|0|2|0|74
Chr7 exon 1464551 1464625 1464551 ID=MsG0780036024.01.T02:exon:6525;Parent=MsG0780036024.01.T02
Chr7 exon 1464830 1464979 1464830 ID=MsG0780036024.01.T02:exon:6526;Parent=MsG0780036024.01.T02
Chr7 CDS 1464551 1464625 1464551 ID=MsG0780036024.01.T02:cds;Parent=MsG0780036024.01.T02
Chr7 CDS 1464830 1464979 1464830 ID=MsG0780036024.01.T02:cds;Parent=MsG0780036024.01.T02
Gene Sequence

>MsG0780036024.01.T01

ATGAAAAGCTACTTTTGTATTGCTGTGGTCAGAACAAGGTGGATGCAGCTATTATGTTGTGATAAAATGTGTGAAGCAGGCTTTATGCCTTCCAGTCAGGAAATGCAATCTGTATTAGAGACTGCTCAGAAACTAATCAAGATTTTCAGGTATTATATCTTACTGAAGCATTCTTTATTATTTGTCTTGTTTCATTTTCTATTGAAAATCAAGGTTGATCAAATATATTTCCATCTTAAGTCGCCATCGCCGTTACGATTTCAAGAGAAATGGAAGATTTACTGGCTTTCGGTACACTTTAGTGTAGTGATGAAAGATGGTTCAAGTGTAGCAGCTTCTCCCGAACAATTAAATTTTATAGTAGCCCAGAGAATAGAAAATTTTCGTGATGAAGCCTTTGATCTAATTTTGAAATATGGGTCCACACATTTGCAATTTGGATTGGACTTGCTGGATCTAATAAAAAAAGAGGTTGGCCTTGCTCCTTCAATAGAATGTCTTGATAGTCTCCTATCTGTTTGTGCCATATCAAGAGATTTGAACAATGCTAATTTGGTTTGGAAAGAATATGCACTTCTTGGTTATCAGCCTTATATAGATAGCTACGTGAGAATGTATCACGCACTTTTGGCCTCGGGAGATCACAGATCTGCTGACAGTATACTCGATGAAATTCCAAGTTATTTCTCTCCTATTGTTTCCGCTCTGAAGGACAGCTTCGTCAAAATGGATGATGTACACGTATCCGATACGTAG

>MsG0780036024.01.T02

ATGTATTCAATCTTGTTGCAGAAAGCTACTTTTTGGCTCTTTGTGAAAGTGACCGCAAGGACAGATTTCGGATGCAAACATTACAAATGCTGTTATTCTCCAAAATGTCCAAGTGCAGTGATGATCTGGATGAAATTTCAAACTACATTGCTGCTTATGCATTTAGCATTCCAAATTAGAGGTGACGAACTTATCATGAATGCTATTGTACGTAAACACCCTTGA
Protein sequence

>MsG0780036024.01.T01

MKSYFCIAVVRTRWMQLLCCDKMCEAGFMPSSQEMQSVLETAQKLIKIFRYYILLKHSLLFVLFHFLLKIKVDQIYFHLKSPSPLRFQEKWKIYWLSVHFSVVMKDGSSVAASPEQLNFIVAQRIENFRDEAFDLILKYGSTHLQFGLDLLDLIKKEVGLAPSIECLDSLLSVCAISRDLNNANLVWKEYALLGYQPYIDSYVRMYHALLASGDHRSADSILDEIPSYFSPIVSALKDSFVKMDDVHVSDT*

>MsG0780036024.01.T02

MYSILLQKATFWLFVKVTARTDFGCKHYKCCYSPKCPSAVMIWMKFQTTLLLMHLAFQIRGDELIMNAIVRKHP*