AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780036795.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780036795.01.T01 MTR_7g019120 96.575 438 15 0 1 438 1 438 0.0 895
MsG0780036795.01.T01 MTR_6g016880 73.148 432 115 1 1 432 1 431 0.0 698
MsG0780036795.01.T01 MTR_6g016875 53.364 431 181 6 1 427 1 415 2.05e-160 459
MsG0780036795.01.T01 MTR_2g016060 50.140 357 160 9 80 425 56 405 3.11e-119 354
MsG0780036795.01.T01 MTR_7g019140 94.152 171 10 0 1 171 1 171 2.44e-116 337
MsG0780036795.01.T01 MTR_8g099300 41.278 407 227 6 24 420 15 419 1.15e-112 338
MsG0780036795.01.T01 MTR_6g007777 45.152 361 190 5 68 424 105 461 3.09e-109 330
MsG0780036795.01.T01 MTR_8g027900 41.033 368 205 3 57 420 196 555 2.79e-106 326
MsG0780036795.01.T01 MTR_5g035090 40.227 353 196 8 78 421 82 428 6.46e-96 295
MsG0780036795.01.T01 MTR_5g035070 42.898 352 188 7 79 421 87 434 7.26e-96 295
MsG0780036795.01.T01 MTR_8g104970 38.243 387 221 9 47 421 86 466 9.56e-93 288
MsG0780036795.01.T01 MTR_3g109840 40.054 367 199 9 68 421 58 416 1.30e-92 286
MsG0780036795.01.T01 MTR_7g033230 39.155 355 200 8 77 421 262 610 1.58e-90 286
MsG0780036795.01.T01 MTR_7g033230 39.155 355 200 8 77 421 332 680 1.07e-89 286
MsG0780036795.01.T01 MTR_0929s0010 99.219 128 1 0 1 128 1 128 5.99e-89 266
MsG0780036795.01.T01 MTR_5g035150 38.418 354 205 7 77 421 83 432 7.05e-88 275
MsG0780036795.01.T01 MTR_5g035080 38.701 354 199 10 79 421 75 421 8.89e-85 266
MsG0780036795.01.T01 MTR_7g019130 93.600 125 8 0 196 320 1 125 2.54e-83 252
MsG0780036795.01.T01 MTR_1g076690 34.783 368 224 6 67 423 211 573 4.64e-77 251
MsG0780036795.01.T01 MTR_6g061710 33.880 366 226 6 69 423 157 517 6.78e-75 243
MsG0780036795.01.T01 MTR_0929s0020 97.701 87 2 0 196 282 1 87 1.10e-57 184
MsG0780036795.01.T01 MTR_0136s0010 31.605 405 221 13 52 423 131 512 3.44e-54 189
MsG0780036795.01.T01 MTR_5g035140 35.185 270 156 9 173 432 14 274 1.67e-52 177
MsG0780036795.01.T01 MTR_7g093450 31.818 396 229 12 53 432 229 599 3.06e-51 182
MsG0780036795.01.T01 MTR_2g022560 33.242 364 198 13 79 420 97 437 9.87e-49 172
MsG0780036795.01.T01 MTR_7g094750 30.726 358 216 11 79 420 91 432 6.77e-48 170
MsG0780036795.01.T01 MTR_5g033800 32.591 359 209 12 77 420 143 483 8.87e-48 171
MsG0780036795.01.T01 MTR_4g126950 29.744 390 226 13 60 427 90 453 5.32e-47 168
MsG0780036795.01.T01 MTR_8g069790 33.333 360 206 12 78 421 177 518 9.46e-46 166
MsG0780036795.01.T01 MTR_5g071350 31.844 358 208 12 77 416 56 395 1.15e-45 163
MsG0780036795.01.T01 MTR_3g464570 29.310 348 226 8 79 420 43 376 2.49e-44 159
MsG0780036795.01.T01 MTR_1g058380 29.504 383 223 13 62 420 35 394 2.80e-43 157
MsG0780036795.01.T01 MTR_8g093530 29.167 360 216 13 76 423 87 419 8.90e-42 153
MsG0780036795.01.T01 MTR_7g109550 30.056 356 212 11 79 421 137 468 1.51e-41 154
MsG0780036795.01.T01 MTR_3g070900 30.682 352 218 9 79 416 106 445 7.13e-41 151
MsG0780036795.01.T01 MTR_7g070060 30.790 367 222 15 68 416 53 405 1.09e-40 150
MsG0780036795.01.T01 MTR_8g463790 26.559 433 274 11 8 420 1 409 1.22e-40 150
MsG0780036795.01.T01 MTR_4g014440 30.411 365 222 12 70 416 53 403 3.95e-40 148
MsG0780036795.01.T01 MTR_4g121560 28.037 428 262 14 10 420 55 453 7.37e-40 149
MsG0780036795.01.T01 MTR_5g059400 30.447 358 216 10 79 420 175 515 1.01e-39 149
MsG0780036795.01.T01 MTR_1g116130 30.447 358 216 10 79 420 175 515 1.01e-39 149
MsG0780036795.01.T01 MTR_4g125060 26.893 383 242 10 56 420 109 471 3.55e-39 147
MsG0780036795.01.T01 MTR_4g092830 27.397 365 222 8 79 420 48 392 4.08e-39 146
MsG0780036795.01.T01 MTR_5g083260 29.577 355 224 11 79 420 83 424 6.03e-39 145
MsG0780036795.01.T01 MTR_4g125060 27.493 371 221 10 73 420 165 510 1.42e-38 146
MsG0780036795.01.T01 MTR_4g125060 26.804 388 236 10 56 420 177 539 1.93e-38 146
MsG0780036795.01.T01 MTR_3g071650 29.213 356 224 10 79 420 89 430 7.92e-38 142
MsG0780036795.01.T01 MTR_1g050448 28.962 366 224 12 63 420 38 375 1.40e-37 140
MsG0780036795.01.T01 MTR_4g016940 29.775 356 226 10 77 420 84 427 1.50e-37 142
MsG0780036795.01.T01 MTR_2g015720 31.054 351 203 11 79 422 42 360 1.99e-37 140
MsG0780036795.01.T01 MTR_6g016240 26.744 430 266 11 23 427 18 423 2.23e-36 138
MsG0780036795.01.T01 MTR_3g021090 28.329 353 217 10 70 416 22 344 2.73e-36 138
MsG0780036795.01.T01 MTR_3g021060 27.350 351 223 8 70 416 37 359 4.84e-36 136
MsG0780036795.01.T01 MTR_1g112210 29.494 356 205 14 75 416 55 378 1.27e-35 135
MsG0780036795.01.T01 MTR_2g073510 28.532 361 207 10 75 420 29 353 1.96e-35 134
MsG0780036795.01.T01 MTR_3g035830 29.014 355 212 10 70 416 22 344 2.09e-35 134
MsG0780036795.01.T01 MTR_4g087730 28.329 353 217 7 76 422 42 364 3.47e-35 134
MsG0780036795.01.T01 MTR_2g091175 28.448 348 206 9 78 416 49 362 4.83e-35 134
MsG0780036795.01.T01 MTR_1g112210 29.462 353 196 14 75 416 55 365 1.34e-34 132
MsG0780036795.01.T01 MTR_7g068920 30.194 361 218 13 77 420 78 421 1.58e-34 133
MsG0780036795.01.T01 MTR_8g093870 26.531 392 236 11 53 420 109 472 1.81e-34 134
MsG0780036795.01.T01 MTR_5g033800 35.223 247 140 9 77 313 143 379 2.33e-34 132
MsG0780036795.01.T01 MTR_4g014430 29.459 370 228 11 66 420 95 446 4.44e-34 132
MsG0780036795.01.T01 MTR_5g082880 28.767 365 215 13 77 416 163 507 4.53e-34 134
MsG0780036795.01.T01 MTR_4g088030 28.080 349 221 9 72 416 24 346 1.42e-33 129
MsG0780036795.01.T01 MTR_7g094750 27.832 309 198 9 20 314 31 328 4.23e-32 125
MsG0780036795.01.T01 MTR_5g034810 30.027 373 215 14 60 420 14 352 6.99e-32 125
MsG0780036795.01.T01 MTR_4g079700 26.446 363 226 8 66 420 34 363 2.25e-31 123
MsG0780036795.01.T01 MTR_3g049330 28.779 344 211 10 79 416 31 346 5.46e-31 122
MsG0780036795.01.T01 MTR_5g035120 50.000 92 46 0 77 168 73 164 3.54e-29 112
MsG0780036795.01.T01 MTR_1g111010 28.125 352 205 14 77 420 30 341 4.13e-28 114
MsG0780036795.01.T01 MTR_3g090120 24.419 430 263 13 24 420 59 459 1.28e-27 114
MsG0780036795.01.T01 MTR_2g073500 27.635 351 211 10 79 420 29 345 3.12e-27 112
MsG0780036795.01.T01 MTR_7g070060 34.359 195 115 6 68 255 53 241 5.09e-27 110
MsG0780036795.01.T01 MTR_7g070060 28.383 303 186 14 131 416 15 303 8.37e-21 92.8
MsG0780036795.01.T01 MTR_3g464570 25.704 284 191 8 143 420 3 272 5.40e-20 89.7
MsG0780036795.01.T01 MTR_7g117160 32.632 190 80 7 231 419 47 189 3.45e-19 85.5
MsG0780036795.01.T01 MTR_5g069320 26.623 308 143 13 123 413 145 386 2.09e-14 75.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780036795.01.T01 AT5G15900 59.574 423 161 5 3 423 17 431 0.0 530
MsG0780036795.01.T01 AT5G15900 59.762 420 159 5 6 423 1 412 0.0 528
MsG0780036795.01.T01 AT3G02440 59.143 350 139 3 79 426 127 474 1.15e-160 462
MsG0780036795.01.T01 AT3G02440 59.143 350 139 3 79 426 135 482 1.41e-160 462
MsG0780036795.01.T01 AT5G15890 51.716 408 170 6 36 423 125 525 1.20e-157 456
MsG0780036795.01.T01 AT3G28150 42.486 346 194 3 78 421 69 411 6.76e-106 320
MsG0780036795.01.T01 AT1G01430 38.771 423 235 12 22 426 38 454 1.15e-101 311
MsG0780036795.01.T01 AT4G01080 42.149 363 182 8 69 418 81 428 1.31e-98 302
MsG0780036795.01.T01 AT4G23790 35.492 417 259 6 12 420 13 427 5.04e-97 298
MsG0780036795.01.T01 AT4G11090 35.366 410 251 6 24 420 17 425 1.37e-96 297
MsG0780036795.01.T01 AT1G70230 36.879 423 234 9 16 421 6 412 2.29e-93 288
MsG0780036795.01.T01 AT4G25360 33.933 389 237 7 47 423 147 527 4.16e-77 249
MsG0780036795.01.T01 AT4G25360 33.933 389 237 7 47 423 147 527 4.16e-77 249
MsG0780036795.01.T01 AT5G51640 34.271 391 237 9 53 428 113 498 1.30e-76 247
MsG0780036795.01.T01 AT3G06080 32.075 371 217 11 79 431 103 456 2.31e-51 180
MsG0780036795.01.T01 AT1G60790 33.858 381 197 14 75 427 186 539 4.60e-51 181
MsG0780036795.01.T01 AT5G19160 30.464 453 266 15 2 427 22 452 2.07e-50 177
MsG0780036795.01.T01 AT3G12060 32.546 381 218 13 75 434 192 554 2.09e-50 179
MsG0780036795.01.T01 AT5G06700 32.967 364 210 10 73 420 249 594 3.12e-49 177
MsG0780036795.01.T01 AT5G64470 29.775 356 220 8 79 420 55 394 5.41e-49 172
MsG0780036795.01.T01 AT5G64470 29.558 362 219 9 79 420 55 400 1.07e-47 169
MsG0780036795.01.T01 AT5G20590 30.685 365 216 12 76 423 138 482 3.87e-47 169
MsG0780036795.01.T01 AT3G62390 29.974 387 230 11 44 416 108 467 8.65e-47 168
MsG0780036795.01.T01 AT2G14530 29.008 393 228 13 54 420 39 406 1.63e-46 166
MsG0780036795.01.T01 AT5G06230 30.504 377 216 12 68 420 10 364 4.35e-45 161
MsG0780036795.01.T01 AT5G06230 30.504 377 216 12 68 420 51 405 6.14e-45 161
MsG0780036795.01.T01 AT2G30010 31.172 401 238 15 34 420 20 396 1.15e-43 157
MsG0780036795.01.T01 AT2G30010 31.172 401 238 15 34 420 63 439 1.65e-43 158
MsG0780036795.01.T01 AT3G11570 31.124 347 193 12 95 420 98 419 2.63e-42 155
MsG0780036795.01.T01 AT5G64020 29.032 372 214 11 79 420 57 408 6.04e-42 153
MsG0780036795.01.T01 AT5G49340 31.405 363 213 14 76 420 97 441 2.29e-41 153
MsG0780036795.01.T01 AT2G40160 30.337 356 217 11 79 416 77 419 1.33e-39 147
MsG0780036795.01.T01 AT2G40160 30.337 356 217 11 79 416 77 419 1.59e-39 147
MsG0780036795.01.T01 AT2G40150 27.865 384 248 10 47 416 48 416 4.89e-39 145
MsG0780036795.01.T01 AT2G30900 31.421 366 213 13 67 420 26 365 6.05e-39 144
MsG0780036795.01.T01 AT3G55990 28.395 405 243 13 34 416 100 479 8.23e-39 146
MsG0780036795.01.T01 AT2G40320 29.972 357 224 11 77 420 79 422 9.43e-39 145
MsG0780036795.01.T01 AT5G58600 29.444 360 211 12 79 420 66 400 1.20e-37 141
MsG0780036795.01.T01 AT5G19160 30.514 331 194 9 2 313 22 335 1.52e-37 140
MsG0780036795.01.T01 AT1G73140 28.610 374 228 9 60 420 58 405 2.04e-37 141
MsG0780036795.01.T01 AT5G01620 29.917 361 217 13 77 420 108 449 1.29e-36 140
MsG0780036795.01.T01 AT5G01620 29.917 361 217 13 77 420 108 449 1.29e-36 140
MsG0780036795.01.T01 AT5G01620 29.917 361 217 13 77 420 116 457 1.68e-36 139
MsG0780036795.01.T01 AT3G11030 29.132 357 224 11 79 420 106 448 1.84e-36 139
MsG0780036795.01.T01 AT2G34070 27.586 348 221 10 79 422 65 385 2.06e-35 135
MsG0780036795.01.T01 AT1G29050 27.299 348 221 9 79 422 61 380 2.21e-35 135
MsG0780036795.01.T01 AT1G48880 27.295 414 255 16 27 426 64 445 3.53e-35 135
MsG0780036795.01.T01 AT5G64470 29.412 272 168 6 79 336 55 316 5.12e-35 132
MsG0780036795.01.T01 AT5G01360 26.667 360 233 10 77 420 34 378 5.29e-35 134
MsG0780036795.01.T01 AT2G37720 27.200 375 211 13 76 420 140 482 7.70e-35 135
MsG0780036795.01.T01 AT5G01360 26.667 360 233 10 77 420 90 434 1.13e-34 134
MsG0780036795.01.T01 AT5G64470 29.151 271 168 6 79 335 55 315 1.97e-34 130
MsG0780036795.01.T01 AT3G14850 28.000 350 223 8 75 420 30 354 2.73e-34 131
MsG0780036795.01.T01 AT3G06080 33.603 247 144 7 79 314 103 340 3.89e-34 130
MsG0780036795.01.T01 AT2G38320 28.638 426 255 18 8 416 7 400 5.75e-34 132
MsG0780036795.01.T01 AT5G20680 25.316 395 219 12 63 420 102 457 9.31e-33 129
MsG0780036795.01.T01 AT5G20680 25.316 395 219 12 63 420 196 551 1.24e-32 130
MsG0780036795.01.T01 AT5G20680 25.316 395 219 12 63 420 196 551 1.24e-32 130
MsG0780036795.01.T01 AT5G20680 25.316 395 219 12 63 420 196 551 1.24e-32 130
MsG0780036795.01.T01 AT5G20680 25.316 395 219 12 63 420 196 551 1.24e-32 130
MsG0780036795.01.T01 AT5G20680 25.316 395 219 12 63 420 178 533 1.71e-32 129
MsG0780036795.01.T01 AT3G54260 27.056 377 229 11 63 425 35 379 4.30e-32 126
MsG0780036795.01.T01 AT2G42570 29.226 349 211 9 78 420 46 364 1.04e-31 124
MsG0780036795.01.T01 AT1G78710 28.729 362 197 13 78 420 37 356 1.20e-31 124
MsG0780036795.01.T01 AT5G20590 32.129 249 149 8 76 313 138 377 1.09e-29 119
MsG0780036795.01.T01 AT3G62390 28.772 285 172 8 44 315 108 374 1.48e-29 119
MsG0780036795.01.T01 AT2G31110 27.011 348 226 9 75 420 41 362 1.28e-28 116
MsG0780036795.01.T01 AT2G38320 29.321 324 200 13 109 416 7 317 7.47e-28 113
MsG0780036795.01.T01 AT2G40160 31.535 241 153 6 79 313 77 311 1.70e-27 112
MsG0780036795.01.T01 AT5G58600 28.523 298 189 8 24 312 7 289 3.51e-27 110
MsG0780036795.01.T01 AT5G06230 28.938 273 154 9 68 316 51 307 6.21e-27 110
MsG0780036795.01.T01 AT2G30900 34.031 191 110 5 67 250 26 207 5.67e-24 101
MsG0780036795.01.T01 AT1G78710 31.220 205 117 8 78 274 30 218 1.84e-18 85.9
MsG0780036795.01.T01 AT2G31110 29.545 176 115 4 78 253 44 210 7.46e-18 83.6
MsG0780036795.01.T01 AT2G34070 24.549 277 178 10 150 422 2 251 6.10e-14 72.0
MsG0780036795.01.T01 AT3G14850 25.000 276 168 10 150 416 2 247 1.39e-12 67.8

Find 98 sgRNAs with CRISPR-Local

Find 275 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCCATATTTCATACAATTT+TGG 0.163102 7:+14018577 None:intergenic
ATTGCTAGTAATGTTACTTT+TGG 0.238498 7:+14018837 None:intergenic
CACCAAAATTGTATGAAATA+TGG 0.265892 7:-14018579 MsG0780036795.01.T01:CDS
ATGATATAGTTCTCTTGATT+TGG 0.277015 7:+14019017 None:intergenic
TTAAGGGCATAACATTTCTT+AGG 0.279666 7:-14014480 MsG0780036795.01.T01:CDS
AAAATTCTTTAAATTATTGA+TGG 0.302379 7:+14014501 None:intergenic
TGTGTTTCATTGCTTCTAAA+TGG 0.304661 7:+14014391 None:intergenic
AGAGGCCATTGTGAAATTAT+AGG 0.307079 7:+14014804 None:intergenic
TTTGTGTAATATGGTGCTTT+TGG 0.316905 7:+14018627 None:intergenic
CAAGCTATGGAACTTCTCTT+TGG 0.318342 7:-14018885 MsG0780036795.01.T01:CDS
GATGAAGGATTTCTAAATAA+AGG 0.319542 7:+14018774 None:intergenic
AATTGTGAGGGGAAAATCTA+TGG 0.332595 7:-14018472 MsG0780036795.01.T01:CDS
GATGGGCACCCTAGTAAATA+TGG 0.352672 7:-14014238 MsG0780036795.01.T01:CDS
TGTGTGCATTGGTGCTTGCC+TGG 0.353744 7:-14014178 MsG0780036795.01.T01:CDS
CAGATTCTGATTACTTGAAA+TGG 0.357669 7:-14018551 MsG0780036795.01.T01:CDS
TCTAAAGAATCAGATTTAAA+AGG 0.364200 7:-14014757 MsG0780036795.01.T01:CDS
TTTGATTATGTTATTCTCAA+TGG 0.365612 7:-14014661 MsG0780036795.01.T01:CDS
CCATGGTACATGGTTAAATC+AGG 0.371275 7:+14014556 None:intergenic
TGAGAGTGTGATACAATTAC+GGG 0.372576 7:+14014859 None:intergenic
AAGCAATGAAACACAATTAG+AGG 0.374389 7:-14014383 MsG0780036795.01.T01:CDS
TTGAGAGTGTGATACAATTA+CGG 0.374668 7:+14014858 None:intergenic
CATTTCAAGTAATCAGAATC+TGG 0.377243 7:+14018552 None:intergenic
TTAAAAGGTCCAGGTTCAAC+TGG 0.378193 7:-14014742 MsG0780036795.01.T01:CDS
AAGAGTGACAAGAATAGAAA+AGG 0.386231 7:+14018926 None:intergenic
AAACATCACACCAATAATAT+AGG 0.393461 7:+14013983 None:intergenic
TTACAAGCTAGATGAAAATT+CGG 0.397770 7:+14013886 None:intergenic
TTCTTTAGATCTTACCAAAT+GGG 0.400274 7:+14014771 None:intergenic
ATAGGAAGCTCACAACCATT+AGG 0.405943 7:+14018519 None:intergenic
GAAAATGGGTTATGGAATCA+AGG 0.409487 7:-14014436 MsG0780036795.01.T01:CDS
TACAATGTCACATTCTCATT+AGG 0.411907 7:+14014208 None:intergenic
ATGAAGGATTTCTAAATAAA+GGG 0.415418 7:+14018775 None:intergenic
CTTGTTAGATATGTTGAAGA+TGG 0.416171 7:-14014131 MsG0780036795.01.T01:CDS
GGCCAATGTCCATATTTACT+AGG 0.417433 7:+14014229 None:intergenic
TATTTACTAGGGTGCCCATC+TGG 0.431629 7:+14014241 None:intergenic
ATGGTTATAGAAGAGCATTT+AGG 0.434534 7:-14014537 MsG0780036795.01.T01:CDS
ATTCTTTAGATCTTACCAAA+TGG 0.442314 7:+14014770 None:intergenic
AAATGCAGTGGATGGTTGAT+TGG 0.444149 7:+14018731 None:intergenic
AAATCACTCCATGTGTCAAT+TGG 0.450630 7:+14014154 None:intergenic
CAAAGAGAAGTTCCATAGCT+TGG 0.453408 7:+14018886 None:intergenic
CATGATTTGCCTACTATCAA+TGG 0.459246 7:-14018409 MsG0780036795.01.T01:intron
CTAAATGAAGTTCCAAGCTA+TGG 0.465970 7:-14018898 MsG0780036795.01.T01:exon
CCATTGTGAAATTATAGGTT+GGG 0.470799 7:+14014809 None:intergenic
CTAAATAAAGGGTAGGATAG+TGG 0.471242 7:+14018786 None:intergenic
CAAGAATAGAAAAGGGCATA+GGG 0.481517 7:+14018934 None:intergenic
TCTTCAGTGGAGATTACTTA+CGG 0.483769 7:+14013947 None:intergenic
TTACACAAATAAAACATGTT+GGG 0.484375 7:-14018613 MsG0780036795.01.T01:CDS
ACAATTTCAAGAAACTGAAA+AGG 0.484760 7:+14018489 None:intergenic
CTGATTACTTGAAATGGAAG+TGG 0.487031 7:-14018545 MsG0780036795.01.T01:CDS
AACTGAAAAGGATTGAATAT+AGG 0.487467 7:+14018501 None:intergenic
AAGCTAGATGAAAATTCGGC+TGG 0.490718 7:+14013890 None:intergenic
CAGTGGAGATTACTTACGGT+TGG 0.493157 7:+14013951 None:intergenic
CATTGATAGTAGGCAAATCA+TGG 0.493482 7:+14018410 None:intergenic
TTCAGTTTCTTGAAATTGTG+AGG 0.497540 7:-14018485 MsG0780036795.01.T01:CDS
GAATCAGATTTAAAAGGTCC+AGG 0.503947 7:-14014751 MsG0780036795.01.T01:CDS
AAGAATCTGTGGGGCATACA+TGG 0.506563 7:-14013928 MsG0780036795.01.T01:three_prime_UTR
AGAGTGACAAGAATAGAAAA+GGG 0.507306 7:+14018927 None:intergenic
TCGAAGAGTCCAGTTGAACC+TGG 0.509975 7:+14014733 None:intergenic
GCCATTGTGAAATTATAGGT+TGG 0.510891 7:+14014808 None:intergenic
ATTACACAAATAAAACATGT+TGG 0.513699 7:-14018614 MsG0780036795.01.T01:CDS
ACATTGGTTTACAAGATCAA+TGG 0.514035 7:-14014635 MsG0780036795.01.T01:CDS
GCAACAATGTTGAGGCCAGA+TGG 0.516688 7:-14014256 MsG0780036795.01.T01:CDS
CTCCATGTGTCAATTGGTCC+AGG 0.518502 7:+14014160 None:intergenic
GAAGTGTTACCATTGATAGT+AGG 0.518972 7:+14018400 None:intergenic
CAACAATGTTGAGGCCAGAT+GGG 0.527334 7:-14014255 MsG0780036795.01.T01:CDS
GCCAATGTCCATATTTACTA+GGG 0.531584 7:+14014230 None:intergenic
AAATGGAAGTGGAAACCTAA+TGG 0.533698 7:-14018534 MsG0780036795.01.T01:CDS
ATGGGTTATGGAATCAAGGT+GGG 0.542229 7:-14014432 MsG0780036795.01.T01:CDS
AAATCATCAAATGCAGTGGA+TGG 0.547828 7:+14018723 None:intergenic
TCTTTAGATCTTACCAAATG+GGG 0.553732 7:+14014772 None:intergenic
GTTAGATATGTTGAAGATGG+AGG 0.553797 7:-14014128 MsG0780036795.01.T01:CDS
TCAGTTTCTTGAAATTGTGA+GGG 0.555588 7:-14018484 MsG0780036795.01.T01:CDS
ATTTAAATCATCAAATGCAG+TGG 0.560828 7:+14018719 None:intergenic
TAAATGCTCTTCTATAACCA+TGG 0.564995 7:+14014539 None:intergenic
ACAAGAATAGAAAAGGGCAT+AGG 0.566263 7:+14018933 None:intergenic
TCTTCTATAACCATGGTACA+TGG 0.570506 7:+14014546 None:intergenic
TTATTCTCAATGGAGGACAT+TGG 0.571639 7:-14014651 MsG0780036795.01.T01:CDS
AATCTCCACTGAAGAATCTG+TGG 0.574941 7:-14013939 MsG0780036795.01.T01:three_prime_UTR
TGTATAATGATTGTGTGCAT+TGG 0.576508 7:-14014189 MsG0780036795.01.T01:CDS
AGCAATGAAACACAATTAGA+GGG 0.580001 7:-14014382 MsG0780036795.01.T01:CDS
ATCTCCACTGAAGAATCTGT+GGG 0.580350 7:-14013938 MsG0780036795.01.T01:three_prime_UTR
CATGGTACATGGTTAAATCA+GGG 0.583701 7:+14014557 None:intergenic
GATTATGTTATTCTCAATGG+AGG 0.586018 7:-14014658 MsG0780036795.01.T01:CDS
AGGATTTCTAAATAAAGGGT+AGG 0.589350 7:+14018779 None:intergenic
CAGTTTCTTGAAATTGTGAG+GGG 0.593200 7:-14018483 MsG0780036795.01.T01:CDS
GGAGATTACTTACGGTTGGA+CGG 0.594002 7:+14013955 None:intergenic
AGCTAGATGAAAATTCGGCT+GGG 0.594972 7:+14013891 None:intergenic
ACCCTAGTAAATATGGACAT+TGG 0.627120 7:-14014231 MsG0780036795.01.T01:CDS
TTAGATATGTTGAAGATGGA+GGG 0.636258 7:-14014127 MsG0780036795.01.T01:CDS
AATGGGTTATGGAATCAAGG+TGG 0.651885 7:-14014433 MsG0780036795.01.T01:CDS
GCATAGGGGATGAAGACTTG+TGG 0.654321 7:+14018949 None:intergenic
AAAATGATTATTTCATGACG+TGG 0.654793 7:-14014837 MsG0780036795.01.T01:CDS
AAGAATAGAAAAGGGCATAG+GGG 0.658791 7:+14018935 None:intergenic
CAACACAAGCAACAATGTTG+AGG 0.661127 7:-14014264 MsG0780036795.01.T01:CDS
CCTGATTTAACCATGTACCA+TGG 0.663940 7:-14014556 MsG0780036795.01.T01:CDS
CCCAACCTATAATTTCACAA+TGG 0.671699 7:-14014809 MsG0780036795.01.T01:CDS
TGCCTGGACCAATTGACACA+TGG 0.672835 7:-14014162 MsG0780036795.01.T01:CDS
ATGCCCCACAGATTCTTCAG+TGG 0.706493 7:+14013934 None:intergenic
TCTCCACTGAAGAATCTGTG+GGG 0.770861 7:-14013937 MsG0780036795.01.T01:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATATTAATTATTGCTT+AGG + Chr7:14015174-14015193 None:intergenic 10.0%
!! AAAATATTAATTATTGCTTA+GGG + Chr7:14015173-14015192 None:intergenic 10.0%
!! AAAATTCTTTAAATTATTGA+TGG + Chr7:14018299-14018318 None:intergenic 10.0%
!! ACAAATAAAATAAAATCATA+CGG - Chr7:14016348-14016367 MsG0780036795.01.T01:intron 10.0%
!! GATATTAAAAGATAAATTAA+AGG + Chr7:14017646-14017665 None:intergenic 10.0%
!! TTAAATTACAAATTCTAATA+TGG + Chr7:14015948-14015967 None:intergenic 10.0%
!!! AACTATAATTTTTTAATTAG+GGG - Chr7:14017403-14017422 MsG0780036795.01.T01:intron 10.0%
!!! AATAATTTAAAATAAAAGCA+AGG - Chr7:14014698-14014717 MsG0780036795.01.T01:CDS 10.0%
!!! ACAAAATTTATAAATTTTCT+AGG - Chr7:14014926-14014945 MsG0780036795.01.T01:intron 10.0%
!!! ATAATTTAAAATAAAAGCAA+GGG - Chr7:14014699-14014718 MsG0780036795.01.T01:CDS 10.0%
!!! ATTATTTATTAAAGTATTGT+TGG + Chr7:14014684-14014703 None:intergenic 10.0%
!!! CAATAATTTAAAGAATTTTA+AGG - Chr7:14018300-14018319 MsG0780036795.01.T01:intron 10.0%
!!! TATCAATTTTATATGTAATT+TGG - Chr7:14018772-14018791 MsG0780036795.01.T01:CDS 10.0%
!!! TTGCTAATATTTTATATAAT+GGG - Chr7:14016199-14016218 MsG0780036795.01.T01:intron 10.0%
!!! TTTATTTTTTCCTATATTAT+TGG - Chr7:14018804-14018823 MsG0780036795.01.T01:CDS 10.0%
!!! TTTGCTAATATTTTATATAA+TGG - Chr7:14016198-14016217 MsG0780036795.01.T01:intron 10.0%
!! AATAATAAAGATTAAGCAAA+AGG + Chr7:14017904-14017923 None:intergenic 15.0%
!! AGATTTAATCAAGATTTAAT+CGG - Chr7:14017539-14017558 MsG0780036795.01.T01:intron 15.0%
!! ATAAAATAATTTGAAAAGCT+TGG - Chr7:14017137-14017156 MsG0780036795.01.T01:intron 15.0%
!! ATATAAAACTACAAAAAGAT+GGG + Chr7:14016243-14016262 None:intergenic 15.0%
!! ATCTAAATAAAATAATTGAG+TGG + Chr7:14016886-14016905 None:intergenic 15.0%
!! ATTAAATCTTGATTAAATCT+TGG + Chr7:14017539-14017558 None:intergenic 15.0%
!! GATTAAATTTCTTATATTGT+TGG + Chr7:14016746-14016765 None:intergenic 15.0%
!! TATAAAGTAGTAATTAATGA+TGG + Chr7:14015252-14015271 None:intergenic 15.0%
!! TCAAATAAAATTAATGTGAT+GGG + Chr7:14015869-14015888 None:intergenic 15.0%
!! TTGTGTTAATACTAATTATA+AGG + Chr7:14017873-14017892 None:intergenic 15.0%
!! TTTAGATAGATATGTATTAT+TGG - Chr7:14016907-14016926 MsG0780036795.01.T01:intron 15.0%
!!! AAACATTTTTAATGATTTTG+TGG + Chr7:14016658-14016677 None:intergenic 15.0%
!!! ATCTTATGTTTTATTTTTGA+CGG + Chr7:14015551-14015570 None:intergenic 15.0%
!!! TAATATGGTTCAAATTTTTA+CGG + Chr7:14015933-14015952 None:intergenic 15.0%
!!! TAGTATCAAATTTTGAATTA+AGG + Chr7:14014625-14014644 None:intergenic 15.0%
!!! TATATCATGGTTTATATTTT+TGG - Chr7:14017800-14017819 MsG0780036795.01.T01:intron 15.0%
!! AAATAATAAAGTAGGCTAAA+AGG - Chr7:14017081-14017100 MsG0780036795.01.T01:intron 20.0%
!! ACTAATTAACACTAATTATG+TGG + Chr7:14016831-14016850 None:intergenic 20.0%
!! ATGAAGGATTTCTAAATAAA+GGG + Chr7:14014025-14014044 None:intergenic 20.0%
!! ATGGCTTAAAATAATAAAGT+AGG - Chr7:14017073-14017092 MsG0780036795.01.T01:intron 20.0%
!! ATTACACAAATAAAACATGT+TGG - Chr7:14014183-14014202 MsG0780036795.01.T01:CDS 20.0%
!! ATTTATTTACCTAATACGAT+TGG + Chr7:14015760-14015779 None:intergenic 20.0%
!! CTAAACCAAAATAATAGAAA+CGG - Chr7:14016458-14016477 MsG0780036795.01.T01:intron 20.0%
!! GATATAAAACTACAAAAAGA+TGG + Chr7:14016244-14016263 None:intergenic 20.0%
!! GTCAAATAAAATTAATGTGA+TGG + Chr7:14015870-14015889 None:intergenic 20.0%
!! TAGGTAAATAAATCATCAAA+TGG - Chr7:14015767-14015786 MsG0780036795.01.T01:intron 20.0%
!! TATCATACATGTGAAAATAT+GGG - Chr7:14015589-14015608 MsG0780036795.01.T01:intron 20.0%
!! TCTAAAGAATCAGATTTAAA+AGG - Chr7:14018040-14018059 MsG0780036795.01.T01:intron 20.0%
!! TTAAACATTGAAAATGTCAA+AGG + Chr7:14014425-14014444 None:intergenic 20.0%
!! TTACACAAATAAAACATGTT+GGG - Chr7:14014184-14014203 MsG0780036795.01.T01:CDS 20.0%
!! TTGTTGAAATTTCAAAGTAT+AGG - Chr7:14014464-14014483 MsG0780036795.01.T01:CDS 20.0%
!! TTTAAAAGAAGAAAAGCTTA+AGG + Chr7:14017729-14017748 None:intergenic 20.0%
!! TTTGAATTAAGGTAATCTAA+AGG + Chr7:14014614-14014633 None:intergenic 20.0%
!! TTTGATTATGTTATTCTCAA+TGG - Chr7:14018136-14018155 MsG0780036795.01.T01:intron 20.0%
!!! AAGCTTTTCTTCTTTTAAAA+TGG - Chr7:14017730-14017749 MsG0780036795.01.T01:intron 20.0%
!!! AGAGTTTTATATGATTCAAT+TGG - Chr7:14018447-14018466 MsG0780036795.01.T01:CDS 20.0%
!!! CATGTTTTATTTGTGTAATA+TGG + Chr7:14014182-14014201 None:intergenic 20.0%
!!! GCATTTACTTTTATATATCA+TGG - Chr7:14017787-14017806 MsG0780036795.01.T01:intron 20.0%
!!! GCTTAATCTTTATTATTTTC+AGG - Chr7:14017907-14017926 MsG0780036795.01.T01:intron 20.0%
!!! GGTTTTTTTAATGTTTTTCA+AGG + Chr7:14014048-14014067 None:intergenic 20.0%
!!! TAATCTTTATTATTTTCAGG+TGG - Chr7:14017910-14017929 MsG0780036795.01.T01:intron 20.0%
!!! TAATGCAATATTAATTTGCA+TGG - Chr7:14016785-14016804 MsG0780036795.01.T01:intron 20.0%
!!! TATAATTTTTTAATTAGGGG+TGG - Chr7:14017406-14017425 MsG0780036795.01.T01:intron 20.0%
!!! TTAGTGTTAATTAGTTTGAA+AGG - Chr7:14016836-14016855 MsG0780036795.01.T01:intron 20.0%
!!! TTCCATATTTCATACAATTT+TGG + Chr7:14014223-14014242 None:intergenic 20.0%
!!! TTGCTTATTTTTCTACTTTA+AGG + Chr7:14016499-14016518 None:intergenic 20.0%
!!! TTTTGGTAGATTATATTGTA+TGG - Chr7:14017817-14017836 MsG0780036795.01.T01:intron 20.0%
!!! TTTTTCTAGTTTTGAAATCA+TGG + Chr7:14015225-14015244 None:intergenic 20.0%
!!! TTTTTTGTTGTTGAAGTATT+TGG - Chr7:14015192-14015211 MsG0780036795.01.T01:intron 20.0%
!!! TTTTTTTTTCCTTTTCACTT+GGG - Chr7:14017039-14017058 MsG0780036795.01.T01:intron 20.0%
! AAAATGATTATTTCATGACG+TGG - Chr7:14017960-14017979 MsG0780036795.01.T01:intron 25.0%
! AAACATCACACCAATAATAT+AGG + Chr7:14018817-14018836 None:intergenic 25.0%
! AACTGAAAAGGATTGAATAT+AGG + Chr7:14014299-14014318 None:intergenic 25.0%
! ACAATTTCAAGAAACTGAAA+AGG + Chr7:14014311-14014330 None:intergenic 25.0%
! ACACATAAATCAAAGATCTA+GGG + Chr7:14015008-14015027 None:intergenic 25.0%
! ATAAACTTAAGTGCAAGTTT+AGG + Chr7:14016123-14016142 None:intergenic 25.0%
! ATTCTTTAGATCTTACCAAA+TGG + Chr7:14018030-14018049 None:intergenic 25.0%
! ATTTAAATCATCAAATGCAG+TGG + Chr7:14014081-14014100 None:intergenic 25.0%
! CACCAAAATTGTATGAAATA+TGG - Chr7:14014218-14014237 MsG0780036795.01.T01:CDS 25.0%
! GAAAAAGAAGCAAGAAAAAA+GGG - Chr7:14018487-14018506 MsG0780036795.01.T01:CDS 25.0%
! GATATATAAAAGTAAATGCG+TGG + Chr7:14017786-14017805 None:intergenic 25.0%
! GATGAAGGATTTCTAAATAA+AGG + Chr7:14014026-14014045 None:intergenic 25.0%
! GTATCATACATGTGAAAATA+TGG - Chr7:14015588-14015607 MsG0780036795.01.T01:intron 25.0%
! TACACATAAATCAAAGATCT+AGG + Chr7:14015009-14015028 None:intergenic 25.0%
! TACGAGAAACAAAAAATTGT+TGG - Chr7:14018190-14018209 MsG0780036795.01.T01:intron 25.0%
! TGAAAAAGAAGCAAGAAAAA+AGG - Chr7:14018486-14018505 MsG0780036795.01.T01:CDS 25.0%
! TTACAAGCTAGATGAAAATT+CGG + Chr7:14018914-14018933 None:intergenic 25.0%
! TTCTTTAGATCTTACCAAAT+GGG + Chr7:14018029-14018048 None:intergenic 25.0%
!! AGATACAAAGAGTATATTTC+TGG + Chr7:14014535-14014554 None:intergenic 25.0%
!! GAAAAAAGGGTTTGAAATTT+AGG - Chr7:14018500-14018519 MsG0780036795.01.T01:CDS 25.0%
!! GGTGAGATATTTTATGTTTT+CGG + Chr7:14015530-14015549 None:intergenic 25.0%
!! TATTCCTACTAATTTGCATA+TGG - Chr7:14016283-14016302 MsG0780036795.01.T01:intron 25.0%
!!! AAAAAGTGTGACATTTTTAC+AGG - Chr7:14014131-14014150 MsG0780036795.01.T01:CDS 25.0%
!!! ACTTTTGGAATCATTTGTTT+TGG + Chr7:14013948-14013967 None:intergenic 25.0%
!!! ATTGCTAGTAATGTTACTTT+TGG + Chr7:14013963-14013982 None:intergenic 25.0%
!!! ATTTCTTTTGAGAAATAGAG+TGG - Chr7:14014579-14014598 MsG0780036795.01.T01:CDS 25.0%
!!! ATTTTAGGTTCATTCTCATA+TGG + Chr7:14016399-14016418 None:intergenic 25.0%
!!! CACTTTTTTATAGAAGTTGA+AGG + Chr7:14014119-14014138 None:intergenic 25.0%
!!! GTTTTTTTTTCCTTTTCACT+TGG - Chr7:14017038-14017057 MsG0780036795.01.T01:intron 25.0%
!!! TTAATGTTTTTCAAGGATGA+AGG + Chr7:14014041-14014060 None:intergenic 25.0%
!!! TTTATTATTTTCAGGTGGAA+TGG - Chr7:14017915-14017934 MsG0780036795.01.T01:intron 25.0%
AAAAGCTTAAGGAAATGCTT+CGG + Chr7:14017718-14017737 None:intergenic 30.0%
AAATAATAGAAACGGTTGAG+AGG - Chr7:14016466-14016485 MsG0780036795.01.T01:intron 30.0%
AAGAGTGACAAGAATAGAAA+AGG + Chr7:14013874-14013893 None:intergenic 30.0%
AAGCAATGAAACACAATTAG+AGG - Chr7:14018414-14018433 MsG0780036795.01.T01:CDS 30.0%
AATACGATTGGATCGAATTA+TGG + Chr7:14015748-14015767 None:intergenic 30.0%
AATGTCCATATGCATTTCAA+AGG - Chr7:14015817-14015836 MsG0780036795.01.T01:intron 30.0%
AATTATTGCTTAGGGACAAA+AGG + Chr7:14015165-14015184 None:intergenic 30.0%
AGAGTGACAAGAATAGAAAA+GGG + Chr7:14013873-14013892 None:intergenic 30.0%
AGCAATGAAACACAATTAGA+GGG - Chr7:14018415-14018434 MsG0780036795.01.T01:CDS 30.0%
AGGATTTCTAAATAAAGGGT+AGG + Chr7:14014021-14014040 None:intergenic 30.0%
ATAAAGTAGGCTAAAAGGAA+TGG - Chr7:14017086-14017105 MsG0780036795.01.T01:intron 30.0%
ATACGATTGGATCGAATTAT+GGG + Chr7:14015747-14015766 None:intergenic 30.0%
ATCAATGCAAAGGTTTACTA+TGG - Chr7:14016616-14016635 MsG0780036795.01.T01:intron 30.0%
ATCATATTGTGTGTCTTATG+CGG - Chr7:14016953-14016972 MsG0780036795.01.T01:intron 30.0%
ATGGAAGGAAATGAAAACAA+AGG - Chr7:14016804-14016823 MsG0780036795.01.T01:intron 30.0%
ATGGGAAATAAAACACAAGA+TGG - Chr7:14016217-14016236 MsG0780036795.01.T01:intron 30.0%
ATGTAAACAATACTATGTGC+TGG - Chr7:14016986-14017005 MsG0780036795.01.T01:intron 30.0%
ATTATTGCTTAGGGACAAAA+GGG + Chr7:14015164-14015183 None:intergenic 30.0%
CAAACATATAGTATCAACCA+AGG + Chr7:14016315-14016334 None:intergenic 30.0%
CACATAAATCAAAGATCTAG+GGG + Chr7:14015007-14015026 None:intergenic 30.0%
CAGATTCTGATTACTTGAAA+TGG - Chr7:14014246-14014265 MsG0780036795.01.T01:CDS 30.0%
CCATTGTGAAATTATAGGTT+GGG + Chr7:14017991-14018010 None:intergenic 30.0%
CTTGTTAGATATGTTGAAGA+TGG - Chr7:14018666-14018685 MsG0780036795.01.T01:CDS 30.0%
GAGCAATACTAATTTGAAAG+TGG - Chr7:14017209-14017228 MsG0780036795.01.T01:intron 30.0%
GATTATGTTATTCTCAATGG+AGG - Chr7:14018139-14018158 MsG0780036795.01.T01:intron 30.0%
GCTAAAAGGAATGGTTTAAA+AGG - Chr7:14017095-14017114 MsG0780036795.01.T01:intron 30.0%
GGTAGATTATATTGTATGGT+TGG - Chr7:14017821-14017840 MsG0780036795.01.T01:intron 30.0%
TAAATGCTCTTCTATAACCA+TGG + Chr7:14018261-14018280 None:intergenic 30.0%
TAATTCGATCCAATCGTATT+AGG - Chr7:14015748-14015767 MsG0780036795.01.T01:intron 30.0%
TACAATGTCACATTCTCATT+AGG + Chr7:14018592-14018611 None:intergenic 30.0%
TACTACTACTATCAATGCAA+AGG - Chr7:14016606-14016625 MsG0780036795.01.T01:intron 30.0%
TAGTCAAGCATTTGAATTAG+TGG + Chr7:14016021-14016040 None:intergenic 30.0%
TCAAGTCTAGTAATTCAAAG+AGG + Chr7:14016094-14016113 None:intergenic 30.0%
TCAGTTTCTTGAAATTGTGA+GGG - Chr7:14014313-14014332 MsG0780036795.01.T01:CDS 30.0%
TCTTTAGATCTTACCAAATG+GGG + Chr7:14018028-14018047 None:intergenic 30.0%
TGTATAATGATTGTGTGCAT+TGG - Chr7:14018608-14018627 MsG0780036795.01.T01:CDS 30.0%
TGTGTTTCATTGCTTCTAAA+TGG + Chr7:14018409-14018428 None:intergenic 30.0%
TTAAGGTAATCTAAAGGTGA+TGG + Chr7:14014608-14014627 None:intergenic 30.0%
TTACGGTTTATAATTTCACG+TGG + Chr7:14015916-14015935 None:intergenic 30.0%
TTAGATATGTTGAAGATGGA+GGG - Chr7:14018670-14018689 MsG0780036795.01.T01:CDS 30.0%
TTAGCCATATGCAAATTAGT+AGG + Chr7:14016290-14016309 None:intergenic 30.0%
TTCAGTTTCTTGAAATTGTG+AGG - Chr7:14014312-14014331 MsG0780036795.01.T01:CDS 30.0%
! AACCCATTTTCAAAATGTGA+TGG + Chr7:14018352-14018371 None:intergenic 30.0%
! CATTTCAAGTAATCAGAATC+TGG + Chr7:14014248-14014267 None:intergenic 30.0%
! CTCAACCGTTTCTATTATTT+TGG + Chr7:14016466-14016485 None:intergenic 30.0%
! TAATATGGTGCTTTTGGATT+TGG + Chr7:14014167-14014186 None:intergenic 30.0%
! TATTGTTGGCACTGAATTTA+AGG + Chr7:14014670-14014689 None:intergenic 30.0%
! TGAAAGTGGTGTATTTGTTT+TGG - Chr7:14017223-14017242 MsG0780036795.01.T01:intron 30.0%
! TTAAGGGCATAACATTTCTT+AGG - Chr7:14018317-14018336 MsG0780036795.01.T01:intron 30.0%
! TTGAGAGTGTGATACAATTA+CGG + Chr7:14017942-14017961 None:intergenic 30.0%
! TTTGTGTAATATGGTGCTTT+TGG + Chr7:14014173-14014192 None:intergenic 30.0%
!! ACATTGGTTTACAAGATCAA+TGG - Chr7:14018162-14018181 MsG0780036795.01.T01:intron 30.0%
!! AGATTCCTTTGAAATGCATA+TGG + Chr7:14015825-14015844 None:intergenic 30.0%
!! ATGGTTATAGAAGAGCATTT+AGG - Chr7:14018260-14018279 MsG0780036795.01.T01:intron 30.0%
!! CACCATCACATTTTGAAAAT+GGG - Chr7:14018347-14018366 MsG0780036795.01.T01:intron 30.0%
!! GACAAAAGGGGTATAATTTT+AGG + Chr7:14015151-14015170 None:intergenic 30.0%
!! GCAATATTAATTTGCATGGA+AGG - Chr7:14016789-14016808 MsG0780036795.01.T01:intron 30.0%
!! TCACCATCACATTTTGAAAA+TGG - Chr7:14018346-14018365 MsG0780036795.01.T01:intron 30.0%
!! TGAGTTATCCATTTTTCATC+TGG + Chr7:14018106-14018125 None:intergenic 30.0%
!!! CACATTTTGAAAATGGGTTA+TGG - Chr7:14018353-14018372 MsG0780036795.01.T01:intron 30.0%
AAATCACTCCATGTGTCAAT+TGG + Chr7:14018646-14018665 None:intergenic 35.0%
AAATCATCAAATGCAGTGGA+TGG + Chr7:14014077-14014096 None:intergenic 35.0%
AAATGGAAGTGGAAACCTAA+TGG - Chr7:14014263-14014282 MsG0780036795.01.T01:CDS 35.0%
AAGTTTGTAACATGCATGGA+GGG - Chr7:14017016-14017035 MsG0780036795.01.T01:intron 35.0%
AATTGTGAGGGGAAAATCTA+TGG - Chr7:14014325-14014344 MsG0780036795.01.T01:CDS 35.0%
ACAAATTCACCGTTGGATTA+AGG - Chr7:14015972-14015991 MsG0780036795.01.T01:intron 35.0%
ACCCTAGTAAATATGGACAT+TGG - Chr7:14018566-14018585 MsG0780036795.01.T01:CDS 35.0%
AGAGGCCATTGTGAAATTAT+AGG + Chr7:14017996-14018015 None:intergenic 35.0%
AGTCTAGTAATTCAAAGAGG+AGG + Chr7:14016091-14016110 None:intergenic 35.0%
CAGTTTCTTGAAATTGTGAG+GGG - Chr7:14014314-14014333 MsG0780036795.01.T01:CDS 35.0%
CATGGTACATGGTTAAATCA+GGG + Chr7:14018243-14018262 None:intergenic 35.0%
CATTAGGAAGATGGCAAAAT+AGG + Chr7:14015704-14015723 None:intergenic 35.0%
CCCAACCTATAATTTCACAA+TGG - Chr7:14017988-14018007 MsG0780036795.01.T01:intron 35.0%
CTAAATAAAGGGTAGGATAG+TGG + Chr7:14014014-14014033 None:intergenic 35.0%
CTAAATGAAGTTCCAAGCTA+TGG - Chr7:14013899-14013918 MsG0780036795.01.T01:three_prime_UTR 35.0%
CTGATTACTTGAAATGGAAG+TGG - Chr7:14014252-14014271 MsG0780036795.01.T01:CDS 35.0%
GAATCAGATTTAAAAGGTCC+AGG - Chr7:14018046-14018065 MsG0780036795.01.T01:intron 35.0%
GCCAATGTCCATATTTACTA+GGG + Chr7:14018570-14018589 None:intergenic 35.0%
GCCATTGTGAAATTATAGGT+TGG + Chr7:14017992-14018011 None:intergenic 35.0%
GTTAGATATGTTGAAGATGG+AGG - Chr7:14018669-14018688 MsG0780036795.01.T01:CDS 35.0%
TAATGCAACAAATTCACCGT+TGG - Chr7:14015965-14015984 MsG0780036795.01.T01:intron 35.0%
TCTTCAGTGGAGATTACTTA+CGG + Chr7:14018853-14018872 None:intergenic 35.0%
TCTTCTATAACCATGGTACA+TGG + Chr7:14018254-14018273 None:intergenic 35.0%
TGAACCTAAAATTAGCCAAG+AGG - Chr7:14016407-14016426 MsG0780036795.01.T01:intron 35.0%
TTATTCTCAATGGAGGACAT+TGG - Chr7:14018146-14018165 MsG0780036795.01.T01:intron 35.0%
TTATTGCTTAGGGACAAAAG+GGG + Chr7:14015163-14015182 None:intergenic 35.0%
TTCCAAGTTTGTAACATGCA+TGG - Chr7:14017012-14017031 MsG0780036795.01.T01:intron 35.0%
TTGATGAGCCAGATGAAAAA+TGG - Chr7:14018095-14018114 MsG0780036795.01.T01:intron 35.0%
! AAGAATAGAAAAGGGCATAG+GGG + Chr7:14013865-14013884 None:intergenic 35.0%
! ACAAGAATAGAAAAGGGCAT+AGG + Chr7:14013867-14013886 None:intergenic 35.0%
! AGACCAAAGACAAAGACTTT+TGG + Chr7:14015668-14015687 None:intergenic 35.0%
! ATTTCACAATGGCCTCTTTT+TGG - Chr7:14017999-14018018 MsG0780036795.01.T01:intron 35.0%
! ATTTTAGGCTTGGAACACTA+TGG + Chr7:14015136-14015155 None:intergenic 35.0%
! CAAGAATAGAAAAGGGCATA+GGG + Chr7:14013866-14013885 None:intergenic 35.0%
! CATGATTTGCCTACTATCAA+TGG - Chr7:14014388-14014407 MsG0780036795.01.T01:CDS 35.0%
! CATTGATAGTAGGCAAATCA+TGG + Chr7:14014390-14014409 None:intergenic 35.0%
! CTATTTTGCCATCTTCCTAA+TGG - Chr7:14015702-14015721 MsG0780036795.01.T01:intron 35.0%
! GAAGTGTTACCATTGATAGT+AGG + Chr7:14014400-14014419 None:intergenic 35.0%
! GGAAAATCTATGGCTTTTGT+TGG - Chr7:14014335-14014354 MsG0780036795.01.T01:CDS 35.0%
! TGACATTTTTACAGGTGAGT+GGG - Chr7:14014139-14014158 MsG0780036795.01.T01:CDS 35.0%
! TGAGAGTGTGATACAATTAC+GGG + Chr7:14017941-14017960 None:intergenic 35.0%
! TTTTCTGTTCCCAAGTGAAA+AGG + Chr7:14017051-14017070 None:intergenic 35.0%
!! AACTGTTCTAGTTTGTGGTT+TGG + Chr7:14016164-14016183 None:intergenic 35.0%
!! AAGGGGTATAATTTTAGGCT+TGG + Chr7:14015146-14015165 None:intergenic 35.0%
!! ATAATTTCACGTGGTGGATA+AGG + Chr7:14015907-14015926 None:intergenic 35.0%
!! GAAAATGGGTTATGGAATCA+AGG - Chr7:14018361-14018380 MsG0780036795.01.T01:intron 35.0%
!! TCTTTGTCTTTGGTCTTGTT+TGG - Chr7:14015672-14015691 MsG0780036795.01.T01:intron 35.0%
!! TTCTCAACTGTTCTAGTTTG+TGG + Chr7:14016169-14016188 None:intergenic 35.0%
!! TTTTGAGAGCCTTAATCCAA+CGG + Chr7:14015984-14016003 None:intergenic 35.0%
!!! ATTTTTTAATTAGGGGTGGC+AGG - Chr7:14017410-14017429 MsG0780036795.01.T01:intron 35.0%
!!! TGGAACACTATGGCTTTTTT+AGG + Chr7:14015126-14015145 None:intergenic 35.0%
!!! TGGCTCAAGTTTTAGTTTCA+AGG - Chr7:14017157-14017176 MsG0780036795.01.T01:intron 35.0%
AAATGCAGTGGATGGTTGAT+TGG + Chr7:14014069-14014088 None:intergenic 40.0%
AAGCTAGATGAAAATTCGGC+TGG + Chr7:14018910-14018929 None:intergenic 40.0%
AAGGAAATGCTTCGGTTGTT+TGG + Chr7:14017710-14017729 None:intergenic 40.0%
AATCCTAGATGTTACGTGAG+GGG - Chr7:14016859-14016878 MsG0780036795.01.T01:intron 40.0%
AATCTCCACTGAAGAATCTG+TGG - Chr7:14018858-14018877 MsG0780036795.01.T01:CDS 40.0%
AGCTAGATGAAAATTCGGCT+GGG + Chr7:14018909-14018928 None:intergenic 40.0%
AGGTTCTACAGTACCTAGAT+TGG - Chr7:14017177-14017196 MsG0780036795.01.T01:intron 40.0%
ATAGGAAGCTCACAACCATT+AGG + Chr7:14014281-14014300 None:intergenic 40.0%
ATCTCCACTGAAGAATCTGT+GGG - Chr7:14018859-14018878 MsG0780036795.01.T01:CDS 40.0%
CAAAGAGAAGTTCCATAGCT+TGG + Chr7:14013914-14013933 None:intergenic 40.0%
CAACACAAGCAACAATGTTG+AGG - Chr7:14018533-14018552 MsG0780036795.01.T01:CDS 40.0%
CAAGCTATGGAACTTCTCTT+TGG - Chr7:14013912-14013931 MsG0780036795.01.T01:three_prime_UTR 40.0%
CAAGTTTGTAACATGCATGG+AGG - Chr7:14017015-14017034 MsG0780036795.01.T01:intron 40.0%
CCATGGTACATGGTTAAATC+AGG + Chr7:14018244-14018263 None:intergenic 40.0%
CCTGATTTAACCATGTACCA+TGG - Chr7:14018241-14018260 MsG0780036795.01.T01:intron 40.0%
CGGTTTATAATTTCACGTGG+TGG + Chr7:14015913-14015932 None:intergenic 40.0%
CGTTAATAGTTGAAGCCTCT+TGG + Chr7:14016425-14016444 None:intergenic 40.0%
CTCCATGCATGTTACAAACT+TGG + Chr7:14017017-14017036 None:intergenic 40.0%
GAATCCTAGATGTTACGTGA+GGG - Chr7:14016858-14016877 MsG0780036795.01.T01:intron 40.0%
GAGCAAAGACAATATACAGC+TGG + Chr7:14015646-14015665 None:intergenic 40.0%
GCTCCAAAAGTCTTTGTCTT+TGG - Chr7:14015662-14015681 MsG0780036795.01.T01:intron 40.0%
GGCCAATGTCCATATTTACT+AGG + Chr7:14018571-14018590 None:intergenic 40.0%
GGTTCTACAGTACCTAGATT+GGG - Chr7:14017178-14017197 MsG0780036795.01.T01:intron 40.0%
TTAAAAGGTCCAGGTTCAAC+TGG - Chr7:14018055-14018074 MsG0780036795.01.T01:intron 40.0%
TTGGATCGAATTATGGGCTT+AGG + Chr7:14015741-14015760 None:intergenic 40.0%
TTTGCATATGGCTAAGTCCT+TGG - Chr7:14016295-14016314 MsG0780036795.01.T01:intron 40.0%
! ATGGGTTATGGAATCAAGGT+GGG - Chr7:14018365-14018384 MsG0780036795.01.T01:intron 40.0%
! GAAGCCTCTTGGCTAATTTT+AGG + Chr7:14016414-14016433 None:intergenic 40.0%
! GTGACATTTTTACAGGTGAG+TGG - Chr7:14014138-14014157 MsG0780036795.01.T01:CDS 40.0%
!! AATGGGTTATGGAATCAAGG+TGG - Chr7:14018364-14018383 MsG0780036795.01.T01:intron 40.0%
!!! GCTCTCTTTTTTCCCAATCT+AGG + Chr7:14017193-14017212 None:intergenic 40.0%
!!! GTGGTGTATTTGTTTTGGAG+TGG - Chr7:14017228-14017247 MsG0780036795.01.T01:intron 40.0%
AAGAATCTGTGGGGCATACA+TGG - Chr7:14018869-14018888 MsG0780036795.01.T01:CDS 45.0%
CAAATGGGGAGTCCAAAAAG+AGG + Chr7:14018014-14018033 None:intergenic 45.0%
CAACAATGTTGAGGCCAGAT+GGG - Chr7:14018542-14018561 MsG0780036795.01.T01:CDS 45.0%
CAACCATGCCATTAGGAAGA+TGG + Chr7:14015713-14015732 None:intergenic 45.0%
CACTTGGGAACAGAAAAGCA+TGG - Chr7:14017054-14017073 MsG0780036795.01.T01:intron 45.0%
CAGTGGAGATTACTTACGGT+TGG + Chr7:14018849-14018868 None:intergenic 45.0%
CATCTTCCTAATGGCATGGT+TGG - Chr7:14015711-14015730 MsG0780036795.01.T01:intron 45.0%
CTTGATGTGACGACTAGTGT+TGG - Chr7:14016544-14016563 MsG0780036795.01.T01:intron 45.0%
GATGGGCACCCTAGTAAATA+TGG - Chr7:14018559-14018578 MsG0780036795.01.T01:CDS 45.0%
GGAATCCTAGATGTTACGTG+AGG - Chr7:14016857-14016876 MsG0780036795.01.T01:intron 45.0%
GGAGATTACTTACGGTTGGA+CGG + Chr7:14018845-14018864 None:intergenic 45.0%
TCTCCACTGAAGAATCTGTG+GGG - Chr7:14018860-14018879 MsG0780036795.01.T01:CDS 45.0%
TTGCCATCTTCCTAATGGCA+TGG - Chr7:14015707-14015726 MsG0780036795.01.T01:intron 45.0%
! CTCTTTTTGGACTCCCCATT+TGG - Chr7:14018012-14018031 MsG0780036795.01.T01:intron 45.0%
! GCTTTTGTTGGAGACTCAGT+TGG - Chr7:14014347-14014366 MsG0780036795.01.T01:CDS 45.0%
! TATTTACTAGGGTGCCCATC+TGG + Chr7:14018559-14018578 None:intergenic 45.0%
!! ATGTGATGGGCACACTTATC+AGG + Chr7:14015856-14015875 None:intergenic 45.0%
!! TGTGATGGGCACACTTATCA+GGG + Chr7:14015855-14015874 None:intergenic 45.0%
!!! AAAACTATAATTTTTTAATT+AGG - Chr7:14017401-14017420 MsG0780036795.01.T01:intron 5.0%
!!! AAACTATAATTTTTTAATTA+GGG - Chr7:14017402-14017421 MsG0780036795.01.T01:intron 5.0%
!!! AATAATTTAAAGAATTTTAA+GGG - Chr7:14018301-14018320 MsG0780036795.01.T01:intron 5.0%
ATGCCCCACAGATTCTTCAG+TGG + Chr7:14018866-14018885 None:intergenic 50.0%
CTCCATGTGTCAATTGGTCC+AGG + Chr7:14018640-14018659 None:intergenic 50.0%
GCAACAATGTTGAGGCCAGA+TGG - Chr7:14018541-14018560 MsG0780036795.01.T01:CDS 50.0%
GCATAGGGGATGAAGACTTG+TGG + Chr7:14013851-14013870 None:intergenic 50.0%
GGTGAACCAACCATGCCATT+AGG + Chr7:14015720-14015739 None:intergenic 50.0%
TCGAAGAGTCCAGTTGAACC+TGG + Chr7:14018067-14018086 None:intergenic 50.0%
TGCCTGGACCAATTGACACA+TGG - Chr7:14018635-14018654 MsG0780036795.01.T01:CDS 50.0%
GGATAAGGACGTGGAGGACA+GGG + Chr7:14015892-14015911 None:intergenic 55.0%
GGTCCCCTCACGTAACATCT+AGG + Chr7:14016865-14016884 None:intergenic 55.0%
TGGATAAGGACGTGGAGGAC+AGG + Chr7:14015893-14015912 None:intergenic 55.0%
! TGTGTGCATTGGTGCTTGCC+TGG - Chr7:14018619-14018638 MsG0780036795.01.T01:CDS 55.0%
!! TCACGTGGTGGATAAGGACG+TGG + Chr7:14015901-14015920 None:intergenic 55.0%
!! CGTGGTGGATAAGGACGTGG+AGG + Chr7:14015898-14015917 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr7 gene 14013781 14019038 14013781 ID=MsG0780036795.01;Name=MsG0780036795.01
Chr7 mRNA 14013781 14019038 14013781 ID=MsG0780036795.01.T01;Parent=MsG0780036795.01;Name=MsG0780036795.01.T01;_AED=0.47;_eAED=0.47;_QI=122|1|1|1|1|1|2|300|438
Chr7 exon 14013781 14014890 14013781 ID=MsG0780036795.01.T01:exon:2855;Parent=MsG0780036795.01.T01
Chr7 exon 14018410 14019038 14018410 ID=MsG0780036795.01.T01:exon:2854;Parent=MsG0780036795.01.T01
Chr7 five_prime_UTR 14018917 14019038 14018917 ID=MsG0780036795.01.T01:five_prime_utr;Parent=MsG0780036795.01.T01
Chr7 CDS 14018410 14018916 14018410 ID=MsG0780036795.01.T01:cds;Parent=MsG0780036795.01.T01
Chr7 CDS 14014081 14014890 14014081 ID=MsG0780036795.01.T01:cds;Parent=MsG0780036795.01.T01
Chr7 three_prime_UTR 14013781 14014080 14013781 ID=MsG0780036795.01.T01:three_prime_utr;Parent=MsG0780036795.01.T01
Gene Sequence

>MsG0780036795.01.T01

ATGAAGTTCCAAGCTATGGAACTTCTCTTTGGTAAAAACACACCAAAACAAATGATTCCAAAAGTAACATTACTAGCAATTTTTGCAATACTTGTCTTCACTGTCACACCACTATCCTACCCTTTATTTAGAAATCCTTCATCCTTGAAAAACATTAAAAAAACCAATCAACCATCCACTGCATTTGATGATTTAAATGAATCAGCAAGTTTGCCTTCAACTTCTATAAAAAAGTGTGACATTTTTACAGGTGAGTGGGTTCCAAATCCAAAAGCACCATATTACACAAATAAAACATGTTGGGCAATTCATGAACACCAAAATTGTATGAAATATGGAAGACCAGATTCTGATTACTTGAAATGGAAGTGGAAACCTAATGGTTGTGAGCTTCCTATATTCAATCCTTTTCAGTTTCTTGAAATTGTGAGGGGAAAATCTATGGCTTTTGTTGGAGACTCAGTTGGTAGAAATCAGATGCAGTCCATGATTTGCCTACTATCAATGGTGGAATGGCCCGTAATTGTATCACACTCTCAAAATGATTATTTCATGACGTGGCACTACCCAACCTATAATTTCACAATGGCCTCTTTTTGGACTCCCCATTTGGTAAGATCTAAAGAATCAGATTTAAAAGGTCCAGGTTCAACTGGACTCTTCGATCTTTACATTGATGAGCCAGATGAAAAATGGATAACTCAAATTGAAGATTTTGATTATGTTATTCTCAATGGAGGACATTGGTTTACAAGATCAATGGTATTCTACGAGAAACAAAAAATTGTTGGATGTCATTATTGTCTCTTAGAAAATGTCCCTGATTTAACCATGTACCATGGTTATAGAAGAGCATTTAGGACTGCATTTAAAGCCATCAATAATTTAAAGAATTTTAAGGGCATAACATTTCTTAGGACATTTTCACCATCACATTTTGAAAATGGGTTATGGAATCAAGGTGGGAATTGTGTTAGAACTAAGCCATTTAGAAGCAATGAAACACAATTAGAGGGATTTAATTTAGAGTTTTATATGATTCAATTGGAAGAGTTCAAAATTGCTGAAAAAGAAGCAAGAAAAAAGGGTTTGAAATTTAGGTTATATGATACAACACAAGCAACAATGTTGAGGCCAGATGGGCACCCTAGTAAATATGGACATTGGCCTAATGAGAATGTGACATTGTATAATGATTGTGTGCATTGGTGCTTGCCTGGACCAATTGACACATGGAGTGATTTCTTGTTAGATATGTTGAAGATGGAGGGTGTGAGATCAGCTGAAGAAAGAAGACTTCATTTGCACACAAATTGA
Protein sequence

>MsG0780036795.01.T01

MKFQAMELLFGKNTPKQMIPKVTLLAIFAILVFTVTPLSYPLFRNPSSLKNIKKTNQPSTAFDDLNESASLPSTSIKKCDIFTGEWVPNPKAPYYTNKTCWAIHEHQNCMKYGRPDSDYLKWKWKPNGCELPIFNPFQFLEIVRGKSMAFVGDSVGRNQMQSMICLLSMVEWPVIVSHSQNDYFMTWHYPTYNFTMASFWTPHLVRSKESDLKGPGSTGLFDLYIDEPDEKWITQIEDFDYVILNGGHWFTRSMVFYEKQKIVGCHYCLLENVPDLTMYHGYRRAFRTAFKAINNLKNFKGITFLRTFSPSHFENGLWNQGGNCVRTKPFRSNETQLEGFNLEFYMIQLEEFKIAEKEARKKGLKFRLYDTTQATMLRPDGHPSKYGHWPNENVTLYNDCVHWCLPGPIDTWSDFLLDMLKMEGVRSAEERRLHLHTN*