AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780037667.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780037667.01.T01 MTR_2g010250 88.547 358 7 1 28 351 31 388 0.0 635
MsG0780037667.01.T01 MTR_2g010290 90.643 342 14 1 28 351 74 415 0.0 622
MsG0780037667.01.T01 MTR_2g010300 80.645 341 30 2 28 334 31 369 0.0 534
MsG0780037667.01.T01 MTR_2g010330 73.276 348 57 2 38 351 45 390 0.0 519
MsG0780037667.01.T01 MTR_2g010280 78.571 350 39 2 36 351 39 386 0.0 516
MsG0780037667.01.T01 MTR_2g010380 71.264 348 66 1 38 351 45 392 6.72e-174 493
MsG0780037667.01.T01 MTR_2g010320 69.828 348 69 2 38 351 41 386 6.55e-163 465
MsG0780037667.01.T01 MTR_8g098565 64.058 345 86 4 43 351 46 388 1.42e-141 411
MsG0780037667.01.T01 MTR_5g034900 46.900 371 148 3 28 351 32 400 7.46e-116 345
MsG0780037667.01.T01 MTR_8g063280 50.696 359 132 5 28 351 31 379 9.26e-115 342
MsG0780037667.01.T01 MTR_8g063260 48.189 359 141 5 28 351 33 381 3.04e-89 277
MsG0780037667.01.T01 MTR_5g026520 37.433 374 183 8 21 351 24 389 3.67e-78 248
MsG0780037667.01.T01 MTR_1g492820 33.149 362 195 7 24 348 42 393 4.88e-67 220
MsG0780037667.01.T01 MTR_4g131830 31.781 365 194 9 27 349 34 385 1.88e-50 176
MsG0780037667.01.T01 MTR_3g057900 30.168 358 196 11 23 343 30 370 1.10e-34 133
MsG0780037667.01.T01 MTR_3g057970 29.577 355 199 12 23 343 27 364 3.59e-33 129
MsG0780037667.01.T01 MTR_5g016410 28.371 356 211 10 28 349 33 378 1.44e-31 124
MsG0780037667.01.T01 MTR_5g016440 29.178 353 203 9 25 344 30 368 7.51e-31 122
MsG0780037667.01.T01 MTR_4g094775 26.735 389 226 12 6 351 8 380 4.33e-30 120
MsG0780037667.01.T01 MTR_4g104660 25.000 352 212 8 23 336 43 380 6.20e-29 117
MsG0780037667.01.T01 MTR_3g057980 26.190 378 219 11 7 343 12 370 1.18e-28 116
MsG0780037667.01.T01 MTR_3g076560 25.562 356 222 10 27 350 52 396 1.34e-28 116
MsG0780037667.01.T01 MTR_5g070850 25.450 389 231 12 6 350 11 384 2.67e-28 115
MsG0780037667.01.T01 MTR_6g084770 27.446 368 214 11 23 351 33 386 4.39e-28 114
MsG0780037667.01.T01 MTR_2g065360 24.513 359 225 9 25 349 6 352 5.95e-27 111
MsG0780037667.01.T01 MTR_5g070920 25.455 385 231 10 6 348 11 381 1.15e-26 110
MsG0780037667.01.T01 MTR_6g034965 24.784 347 229 7 17 338 26 365 1.70e-26 110
MsG0780037667.01.T01 MTR_5g018980 24.728 368 222 8 23 348 31 385 6.06e-26 108
MsG0780037667.01.T01 MTR_8g020940 26.359 368 216 11 22 349 32 384 9.34e-26 108
MsG0780037667.01.T01 MTR_1g031700 24.409 381 236 10 6 350 14 378 1.40e-25 107
MsG0780037667.01.T01 MTR_5g019010 23.416 363 231 7 23 348 30 382 2.58e-25 107
MsG0780037667.01.T01 MTR_5g070710 24.416 385 236 11 7 350 11 381 2.76e-25 106
MsG0780037667.01.T01 MTR_6g035100 25.073 343 225 5 21 338 30 365 4.18e-25 106
MsG0780037667.01.T01 MTR_7g075610 26.486 370 217 8 22 350 29 384 5.17e-25 105
MsG0780037667.01.T01 MTR_4g104640 24.058 345 211 8 31 336 52 384 6.33e-25 105
MsG0780037667.01.T01 MTR_5g070700 24.679 389 234 12 6 350 11 384 6.89e-25 105
MsG0780037667.01.T01 MTR_5g094550 25.556 360 210 12 28 348 39 379 8.11e-25 105
MsG0780037667.01.T01 MTR_5g470730 24.165 389 238 12 6 351 11 385 2.50e-24 103
MsG0780037667.01.T01 MTR_3g057860 22.928 362 229 8 23 348 34 381 2.92e-24 103
MsG0780037667.01.T01 MTR_5g007460 25.405 370 216 12 23 350 6 357 3.52e-24 103
MsG0780037667.01.T01 MTR_8g020950 24.862 362 218 8 28 349 39 386 5.13e-24 103
MsG0780037667.01.T01 MTR_5g007450 25.210 357 221 11 23 350 39 378 6.26e-24 102
MsG0780037667.01.T01 MTR_5g094540 25.281 356 216 11 28 348 39 379 6.33e-24 102
MsG0780037667.01.T01 MTR_4g102310 23.631 347 213 7 28 336 40 372 9.00e-24 102
MsG0780037667.01.T01 MTR_2g437840 26.289 388 231 10 6 351 6 380 9.62e-24 102
MsG0780037667.01.T01 MTR_5g018990 23.077 364 228 8 24 348 33 383 1.04e-23 102
MsG0780037667.01.T01 MTR_4g095050 26.648 364 216 11 28 351 32 384 1.65e-23 101
MsG0780037667.01.T01 MTR_2g437880 27.215 316 186 8 56 333 58 367 1.70e-23 101
MsG0780037667.01.T01 MTR_5g070690 24.384 365 225 11 23 350 32 382 1.84e-23 101
MsG0780037667.01.T01 MTR_5g070800 24.384 365 225 11 23 350 32 382 1.84e-23 101
MsG0780037667.01.T01 MTR_5g007550 24.650 357 223 11 23 350 39 378 2.08e-23 101
MsG0780037667.01.T01 MTR_4g109470 25.449 334 200 6 54 348 55 378 2.26e-23 101
MsG0780037667.01.T01 MTR_1g103670 25.263 380 234 14 6 350 14 378 2.30e-23 101
MsG0780037667.01.T01 MTR_4g026200 26.471 374 215 12 20 349 19 376 3.09e-23 100
MsG0780037667.01.T01 MTR_3g025260 25.749 334 201 6 54 348 56 381 4.14e-23 100
MsG0780037667.01.T01 MTR_5g056720 30.159 315 186 9 47 349 15 307 5.74e-23 99.4
MsG0780037667.01.T01 MTR_5g094560 26.062 353 207 11 28 343 39 374 6.14e-23 100
MsG0780037667.01.T01 MTR_5g094570 24.719 356 218 11 28 348 39 379 6.50e-23 99.8
MsG0780037667.01.T01 MTR_5g021390 24.384 365 212 11 18 337 36 381 1.02e-22 99.4
MsG0780037667.01.T01 MTR_4g133750 24.793 363 215 12 24 348 35 377 1.16e-22 99.4
MsG0780037667.01.T01 MTR_4g104610 23.387 372 221 10 26 350 28 382 1.53e-22 99.0
MsG0780037667.01.T01 MTR_7g075580 27.164 335 197 8 54 350 58 383 2.63e-22 98.2
MsG0780037667.01.T01 MTR_4g104550 25.140 358 221 12 27 350 29 373 2.90e-22 97.8
MsG0780037667.01.T01 MTR_4g035330 25.648 347 211 9 27 343 31 360 4.49e-22 97.4
MsG0780037667.01.T01 MTR_3g058210 24.432 352 218 9 28 343 38 377 5.89e-22 97.1
MsG0780037667.01.T01 MTR_5g073320 25.000 360 213 10 28 348 39 380 6.20e-22 97.1
MsG0780037667.01.T01 MTR_1g091023 25.205 365 218 14 23 350 31 377 6.43e-22 97.1
MsG0780037667.01.T01 MTR_0608s0010 24.021 383 221 13 6 350 14 364 6.82e-22 95.9
MsG0780037667.01.T01 MTR_3g436540 25.753 365 225 8 19 348 32 385 7.33e-22 97.1
MsG0780037667.01.T01 MTR_8g091690 25.352 355 215 9 19 336 16 357 8.55e-22 96.7
MsG0780037667.01.T01 MTR_8g076290 24.933 373 216 11 25 351 32 386 1.32e-21 96.3
MsG0780037667.01.T01 MTR_4g102280 23.599 339 209 6 49 348 63 390 1.67e-21 95.9
MsG0780037667.01.T01 MTR_5g095290 25.656 343 207 9 28 337 42 369 1.71e-21 95.9
MsG0780037667.01.T01 MTR_7g087520 25.745 369 201 12 28 344 38 385 2.01e-21 95.5
MsG0780037667.01.T01 MTR_1g091010 24.658 365 220 14 23 350 30 376 2.44e-21 95.1
MsG0780037667.01.T01 MTR_8g046240 25.414 362 225 8 23 350 37 387 2.73e-21 95.1
MsG0780037667.01.T01 MTR_5g094660 23.714 350 218 10 28 343 39 373 3.29e-21 94.7
MsG0780037667.01.T01 MTR_7g075390 26.966 356 200 10 22 333 29 368 3.74e-21 94.7
MsG0780037667.01.T01 MTR_3g025230 23.952 334 207 6 54 348 56 381 4.06e-21 94.7
MsG0780037667.01.T01 MTR_5g023680 24.852 338 209 8 28 330 6 333 4.35e-21 94.4
MsG0780037667.01.T01 MTR_5g045250 27.465 284 156 8 91 338 119 388 6.89e-21 94.0
MsG0780037667.01.T01 MTR_0022s0290 22.995 374 220 12 26 349 41 396 8.65e-21 93.6
MsG0780037667.01.T01 MTR_3g058240 25.806 341 201 10 28 330 2 328 1.32e-20 92.8
MsG0780037667.01.T01 MTR_4g077210 22.255 337 220 6 51 350 53 384 1.85e-20 92.8
MsG0780037667.01.T01 MTR_3g058000 24.586 362 216 9 28 348 39 384 2.08e-20 92.4
MsG0780037667.01.T01 MTR_3g024520 23.653 334 208 6 54 348 56 381 2.69e-20 92.4
MsG0780037667.01.T01 MTR_5g094520 24.930 357 216 12 28 348 70 410 2.95e-20 92.0
MsG0780037667.01.T01 MTR_7g092600 26.284 331 198 8 54 348 63 383 3.87e-20 91.7
MsG0780037667.01.T01 MTR_3g057910 23.352 364 225 11 23 348 35 382 5.36e-20 91.3
MsG0780037667.01.T01 MTR_7g075540 26.113 337 196 9 54 350 58 381 6.52e-20 90.9
MsG0780037667.01.T01 MTR_5g045770 25.691 362 221 10 23 348 26 375 8.38e-20 90.9
MsG0780037667.01.T01 MTR_4g025980 23.824 340 209 9 28 330 31 357 8.62e-20 90.5
MsG0780037667.01.T01 MTR_8g020960 24.665 373 228 9 17 349 26 385 1.07e-19 90.5
MsG0780037667.01.T01 MTR_3g077460 24.419 344 195 13 25 350 6 302 1.19e-19 89.7
MsG0780037667.01.T01 MTR_0554s0020 25.000 340 204 10 28 330 38 363 1.38e-19 90.1
MsG0780037667.01.T01 MTR_3g058250 23.894 339 210 7 28 330 36 362 1.51e-19 90.1
MsG0780037667.01.T01 MTR_4g094772 25.575 348 212 10 27 344 34 364 2.00e-19 89.7
MsG0780037667.01.T01 MTR_8g027040 25.000 344 206 12 30 338 87 413 3.42e-19 89.0
MsG0780037667.01.T01 MTR_8g466180 23.760 383 232 10 12 348 12 380 3.63e-19 89.0
MsG0780037667.01.T01 MTR_1g097220 23.647 351 216 11 25 338 59 394 4.17e-19 88.6
MsG0780037667.01.T01 MTR_6g008430 23.333 390 236 12 7 349 23 396 1.19e-18 87.4
MsG0780037667.01.T01 MTR_4g088195 23.229 353 210 13 27 337 35 368 1.21e-18 87.4
MsG0780037667.01.T01 MTR_8g046210 24.928 345 214 8 23 333 37 370 1.49e-18 87.0
MsG0780037667.01.T01 MTR_3g058390 24.633 341 205 9 28 330 36 362 1.77e-18 86.7
MsG0780037667.01.T01 MTR_7g012330 24.496 347 218 10 26 338 33 369 2.12e-18 86.7
MsG0780037667.01.T01 MTR_1g091003 24.722 360 217 14 28 350 35 377 2.86e-18 86.3
MsG0780037667.01.T01 MTR_1g442730 27.434 339 198 9 28 330 35 361 3.33e-18 85.9
MsG0780037667.01.T01 MTR_1g111240 22.393 326 210 6 54 344 90 407 4.31e-18 85.9
MsG0780037667.01.T01 MTR_4g089025 23.120 359 229 7 27 350 53 399 4.89e-18 85.5
MsG0780037667.01.T01 MTR_1g035140 23.647 351 208 9 28 337 38 369 5.31e-18 85.5
MsG0780037667.01.T01 MTR_5g073230 22.969 357 209 11 28 348 42 368 8.92e-18 84.7
MsG0780037667.01.T01 MTR_4g089030 23.035 369 220 12 27 350 49 398 9.31e-18 84.7
MsG0780037667.01.T01 MTR_4g018800 24.119 369 216 10 33 351 51 405 1.73e-17 84.0
MsG0780037667.01.T01 MTR_1g037370 24.590 366 228 11 19 350 24 375 1.88e-17 83.6
MsG0780037667.01.T01 MTR_5g072980 23.919 347 215 10 28 336 34 369 2.60e-17 83.2
MsG0780037667.01.T01 MTR_5g072930 23.919 347 215 10 28 336 34 369 2.60e-17 83.2
MsG0780037667.01.T01 MTR_6g022450 23.611 360 231 9 27 349 38 390 3.14e-17 83.2
MsG0780037667.01.T01 MTR_8g104080 29.902 204 128 9 22 222 32 223 3.97e-17 80.9
MsG0780037667.01.T01 MTR_8g080520 24.571 350 217 11 22 338 62 397 3.99e-17 82.8
MsG0780037667.01.T01 MTR_5g070980 33.129 163 98 4 6 162 11 168 4.44e-17 79.7
MsG0780037667.01.T01 MTR_3g436390 22.284 359 235 9 18 343 26 373 4.48e-17 82.4
MsG0780037667.01.T01 MTR_3g058110 23.662 355 218 9 28 343 39 379 5.06e-17 82.4
MsG0780037667.01.T01 MTR_2g073420 24.317 366 224 13 22 350 40 389 1.31e-16 81.3
MsG0780037667.01.T01 MTR_3g014880 23.836 365 221 8 35 349 47 404 1.42e-16 81.3
MsG0780037667.01.T01 MTR_4g025970 22.865 363 231 11 23 348 26 376 2.01e-16 80.5
MsG0780037667.01.T01 MTR_1g035190 23.324 343 207 10 28 330 21 347 4.02e-16 79.7
MsG0780037667.01.T01 MTR_4g104540 22.257 319 204 8 67 350 3 312 6.19e-16 79.0
MsG0780037667.01.T01 MTR_3g076550 23.279 305 175 7 82 350 88 369 6.26e-16 79.0
MsG0780037667.01.T01 MTR_1g103680 23.684 342 213 13 23 330 32 359 1.12e-15 78.2
MsG0780037667.01.T01 MTR_1g116890 23.118 372 229 10 23 351 31 388 1.29e-15 78.2
MsG0780037667.01.T01 MTR_2g450040 25.344 363 219 11 25 345 36 388 1.51e-15 78.2
MsG0780037667.01.T01 MTR_7g075600 24.843 318 192 9 54 333 58 366 3.20e-15 77.0
MsG0780037667.01.T01 MTR_3g020780 21.096 365 225 12 21 338 29 377 1.87e-14 74.7
MsG0780037667.01.T01 MTR_0638s0020 24.405 336 211 11 25 349 6 309 3.00e-14 73.9
MsG0780037667.01.T01 MTR_4g025950 28.485 165 113 4 23 186 26 186 3.65e-14 72.8
MsG0780037667.01.T01 MTR_4g026070 30.872 149 97 3 19 164 18 163 5.80e-14 72.0
MsG0780037667.01.T01 MTR_8g091680 23.284 335 201 8 37 351 35 333 6.35e-14 72.8
MsG0780037667.01.T01 MTR_8g036185 23.263 331 198 11 54 338 58 378 6.71e-14 73.2
MsG0780037667.01.T01 MTR_8g469300 22.981 322 195 10 57 336 62 372 6.30e-13 70.1
MsG0780037667.01.T01 MTR_4g088400 22.102 371 231 12 25 351 44 400 6.43e-13 70.1
MsG0780037667.01.T01 MTR_4g088425 23.035 369 225 12 23 351 35 384 1.61e-11 65.9
MsG0780037667.01.T01 MTR_6g035115 34.343 99 60 1 253 351 286 379 3.71e-11 64.7
MsG0780037667.01.T01 MTR_0451s0010 29.412 119 79 1 231 349 89 202 5.15e-11 63.5
MsG0780037667.01.T01 MTR_1750s0010 36.782 87 50 1 264 350 1 82 8.67e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780037667.01.T01 AT1G64940 47.541 366 143 3 28 351 34 392 1.48e-116 347
MsG0780037667.01.T01 AT2G12190 48.361 366 140 3 28 351 33 391 1.74e-114 342
MsG0780037667.01.T01 AT1G64950 48.361 366 140 3 28 351 33 391 6.15e-114 340
MsG0780037667.01.T01 AT1G64930 44.536 366 153 4 28 351 33 390 9.97e-107 322
MsG0780037667.01.T01 AT3G03470 45.380 368 163 6 19 351 24 388 1.63e-96 296
MsG0780037667.01.T01 AT1G64900 44.258 357 151 4 34 351 38 385 4.61e-91 281
MsG0780037667.01.T01 AT5G61320 44.798 346 133 6 40 349 44 367 5.32e-89 276
MsG0780037667.01.T01 AT3G10560 33.244 373 203 7 9 348 31 390 2.48e-60 202
MsG0780037667.01.T01 AT5G04630 33.146 356 195 7 28 348 39 386 2.13e-58 197
MsG0780037667.01.T01 AT3G10570 32.849 344 189 6 39 348 55 390 4.21e-58 196
MsG0780037667.01.T01 AT5G04660 32.229 332 180 6 53 348 67 389 1.27e-57 195
MsG0780037667.01.T01 AT1G11600 32.507 363 193 7 28 349 36 387 5.86e-51 177
MsG0780037667.01.T01 AT3G48280 25.843 356 218 10 25 350 29 368 1.14e-29 119
MsG0780037667.01.T01 AT4G37430 27.778 360 212 10 28 350 29 377 1.15e-29 119
MsG0780037667.01.T01 AT5G36220 26.891 357 219 11 27 349 34 382 1.99e-29 118
MsG0780037667.01.T01 AT4G37340 27.855 359 212 11 27 350 31 377 4.63e-29 117
MsG0780037667.01.T01 AT3G26280 27.548 363 212 11 28 350 33 384 5.27e-29 117
MsG0780037667.01.T01 AT3G26280 27.548 363 212 11 28 350 50 401 6.99e-29 117
MsG0780037667.01.T01 AT5G67310 26.761 355 217 11 28 349 43 387 1.01e-28 116
MsG0780037667.01.T01 AT4G37360 27.222 360 213 10 27 350 31 377 7.65e-28 114
MsG0780037667.01.T01 AT4G37320 26.062 353 213 9 27 344 32 371 9.84e-28 114
MsG0780037667.01.T01 AT4G13310 24.167 360 230 9 23 350 29 377 3.98e-27 110
MsG0780037667.01.T01 AT4G13310 24.167 360 230 9 23 350 29 377 1.32e-26 110
MsG0780037667.01.T01 AT3G26200 25.287 348 204 10 28 333 29 362 6.96e-26 108
MsG0780037667.01.T01 AT4G13290 24.363 353 232 10 22 350 29 370 8.48e-26 108
MsG0780037667.01.T01 AT4G12300 25.069 363 220 7 28 351 43 392 1.37e-25 107
MsG0780037667.01.T01 AT5G57220 26.536 358 212 10 28 350 31 372 6.64e-25 105
MsG0780037667.01.T01 AT4G37400 27.217 327 193 9 57 350 58 372 7.17e-25 105
MsG0780037667.01.T01 AT3G53280 26.629 353 205 11 20 332 21 359 8.46e-25 105
MsG0780037667.01.T01 AT4G37330 26.211 351 222 8 27 349 32 373 1.06e-24 105
MsG0780037667.01.T01 AT4G37410 26.197 355 220 9 27 350 31 374 1.07e-24 105
MsG0780037667.01.T01 AT3G48300 24.642 349 219 9 31 350 33 366 1.98e-24 104
MsG0780037667.01.T01 AT3G48300 24.642 349 219 9 31 350 35 368 2.01e-24 104
MsG0780037667.01.T01 AT3G26270 25.000 368 220 12 25 350 30 383 2.64e-24 103
MsG0780037667.01.T01 AT3G48270 23.729 354 225 10 26 350 31 368 3.11e-24 103
MsG0780037667.01.T01 AT3G28740 25.926 324 191 8 64 351 76 386 5.56e-24 103
MsG0780037667.01.T01 AT1G13110 26.389 360 206 11 28 343 33 377 7.80e-24 102
MsG0780037667.01.T01 AT4G13770 26.593 361 213 13 28 349 31 378 1.64e-23 101
MsG0780037667.01.T01 AT3G26190 23.547 344 215 11 28 333 29 362 3.59e-23 100
MsG0780037667.01.T01 AT2G40890 25.410 366 213 11 28 350 28 376 1.02e-22 99.4
MsG0780037667.01.T01 AT1G13090 26.389 360 206 12 28 344 29 372 1.88e-22 98.6
MsG0780037667.01.T01 AT5G35715 26.074 326 188 10 67 350 3 317 2.92e-22 97.8
MsG0780037667.01.T01 AT3G20140 26.437 348 206 11 27 338 43 376 3.52e-22 97.8
MsG0780037667.01.T01 AT5G24950 25.429 350 211 12 27 342 33 366 4.13e-22 97.4
MsG0780037667.01.T01 AT4G12320 23.743 358 219 9 28 344 43 387 4.21e-22 97.8
MsG0780037667.01.T01 AT5G06905 25.634 355 211 11 23 338 27 367 4.46e-22 97.4
MsG0780037667.01.T01 AT5G06900 25.360 347 212 9 27 338 35 369 7.12e-22 97.1
MsG0780037667.01.T01 AT3G48290 24.576 354 222 11 26 350 33 370 1.99e-21 95.5
MsG0780037667.01.T01 AT2G30770 24.719 356 223 10 27 350 34 376 2.63e-21 95.1
MsG0780037667.01.T01 AT1G01280 26.036 338 202 11 49 344 47 378 2.87e-21 95.1
MsG0780037667.01.T01 AT3G20110 26.064 376 222 13 6 337 9 372 3.33e-21 95.1
MsG0780037667.01.T01 AT3G26230 26.902 368 205 12 23 343 23 373 4.48e-21 94.7
MsG0780037667.01.T01 AT4G15330 24.928 349 207 9 26 337 41 371 6.55e-21 94.0
MsG0780037667.01.T01 AT5G07990 23.967 363 226 9 22 348 29 377 7.06e-21 94.0
MsG0780037667.01.T01 AT5G09970 24.496 347 220 8 25 338 67 404 7.26e-21 94.0
MsG0780037667.01.T01 AT4G22690 25.989 354 211 11 36 351 93 433 1.71e-20 93.2
MsG0780037667.01.T01 AT3G48310 21.875 352 231 9 28 350 33 369 2.01e-20 92.4
MsG0780037667.01.T01 AT3G20090 23.750 320 200 7 54 338 68 378 2.50e-20 92.4
MsG0780037667.01.T01 AT3G26330 24.167 360 226 10 22 346 27 374 2.53e-20 92.4
MsG0780037667.01.T01 AT2G23190 23.876 356 231 8 27 351 76 422 3.43e-20 92.0
MsG0780037667.01.T01 AT3G26210 24.085 328 191 9 61 344 62 375 4.29e-20 91.7
MsG0780037667.01.T01 AT4G22710 26.685 356 206 12 36 351 62 402 4.36e-20 91.7
MsG0780037667.01.T01 AT1G50520 25.153 326 200 8 46 336 61 377 4.78e-20 91.7
MsG0780037667.01.T01 AT5G10610 24.044 366 212 11 23 345 29 371 6.64e-20 91.3
MsG0780037667.01.T01 AT3G44250 23.209 349 219 9 20 330 21 358 8.76e-20 90.9
MsG0780037667.01.T01 AT5G10600 24.100 361 222 11 22 345 42 387 1.05e-19 90.5
MsG0780037667.01.T01 AT3G26300 24.157 356 221 9 24 343 29 371 1.41e-19 90.1
MsG0780037667.01.T01 AT2G45560 22.438 361 231 7 28 350 39 388 1.42e-19 90.1
MsG0780037667.01.T01 AT2G45570 23.582 335 205 7 57 350 65 389 2.18e-19 89.7
MsG0780037667.01.T01 AT3G48290 23.421 380 220 11 26 350 33 396 2.26e-19 89.7
MsG0780037667.01.T01 AT1G74110 26.243 362 204 15 25 338 59 405 2.66e-19 89.4
MsG0780037667.01.T01 AT3G26320 24.138 377 234 11 6 346 14 374 5.21e-19 88.6
MsG0780037667.01.T01 AT3G20960 25.538 325 192 10 55 342 67 378 8.58e-19 87.8
MsG0780037667.01.T01 AT1G01190 25.220 341 204 10 30 338 76 397 1.26e-18 87.4
MsG0780037667.01.T01 AT1G01190 25.220 341 204 10 30 338 81 402 1.42e-18 87.4
MsG0780037667.01.T01 AT3G53300 23.547 344 215 12 28 333 29 362 2.18e-18 86.7
MsG0780037667.01.T01 AT4G15360 26.415 371 215 12 6 337 24 375 2.57e-18 86.3
MsG0780037667.01.T01 AT1G33720 24.390 369 219 13 25 350 37 388 4.39e-18 85.9
MsG0780037667.01.T01 AT1G11610 23.315 356 228 8 27 350 34 376 4.57e-18 85.5
MsG0780037667.01.T01 AT3G20950 24.363 353 210 10 26 338 45 380 4.67e-18 85.5
MsG0780037667.01.T01 AT5G25180 23.099 342 219 7 28 336 30 360 4.69e-18 85.5
MsG0780037667.01.T01 AT1G11610 23.315 356 228 8 27 350 34 376 5.40e-18 85.5
MsG0780037667.01.T01 AT4G37310 25.532 376 217 13 23 351 27 386 5.68e-18 85.5
MsG0780037667.01.T01 AT5G44620 23.864 352 208 9 36 344 55 389 6.41e-18 85.1
MsG0780037667.01.T01 AT3G26290 23.768 345 216 8 24 333 42 374 7.83e-18 85.1
MsG0780037667.01.T01 AT3G26290 23.768 345 216 8 24 333 29 361 8.17e-18 84.7
MsG0780037667.01.T01 AT4G36220 22.590 363 217 10 35 349 48 394 9.65e-18 84.7
MsG0780037667.01.T01 AT3G52970 25.069 363 217 11 25 344 35 385 1.02e-17 84.7
MsG0780037667.01.T01 AT5G42580 25.325 308 197 8 54 338 64 361 1.06e-17 84.3
MsG0780037667.01.T01 AT4G15350 22.892 332 201 8 57 348 63 379 1.09e-17 84.3
MsG0780037667.01.T01 AT1G13710 23.077 312 199 8 60 338 81 384 1.20e-17 84.3
MsG0780037667.01.T01 AT1G74550 22.222 315 211 9 61 350 58 363 2.80e-17 83.2
MsG0780037667.01.T01 AT2G42250 22.287 341 224 7 28 336 42 373 3.90e-17 82.8
MsG0780037667.01.T01 AT2G05180 24.691 324 192 7 54 338 66 376 4.27e-17 82.4
MsG0780037667.01.T01 AT3G61040 21.569 357 234 8 28 351 34 377 4.37e-17 82.0
MsG0780037667.01.T01 AT3G61040 21.569 357 234 8 28 351 34 377 5.15e-17 82.4
MsG0780037667.01.T01 AT3G20940 23.720 371 227 10 6 338 25 377 5.33e-17 82.4
MsG0780037667.01.T01 AT5G57260 23.677 359 227 10 25 346 29 377 5.55e-17 82.4
MsG0780037667.01.T01 AT1G74540 22.601 323 206 7 61 350 58 369 5.90e-17 82.4
MsG0780037667.01.T01 AT4G39950 23.177 384 221 15 23 351 50 414 1.85e-16 80.9
MsG0780037667.01.T01 AT4G39950 23.324 373 222 13 28 351 97 454 1.85e-16 80.9
MsG0780037667.01.T01 AT3G48320 21.493 335 219 9 28 333 33 352 2.27e-16 80.5
MsG0780037667.01.T01 AT2G22330 22.632 380 216 12 28 351 59 416 2.98e-16 80.1
MsG0780037667.01.T01 AT2G22330 22.632 380 216 12 28 351 82 439 3.11e-16 80.1
MsG0780037667.01.T01 AT2G14100 22.154 325 198 9 54 338 68 377 3.40e-16 80.1
MsG0780037667.01.T01 AT3G26220 26.437 348 207 9 23 330 25 363 5.76e-16 79.3
MsG0780037667.01.T01 AT3G52970 24.202 376 218 11 25 344 35 399 7.78e-16 79.0
MsG0780037667.01.T01 AT2G46660 24.556 338 211 11 30 338 73 395 8.07e-16 79.0
MsG0780037667.01.T01 AT2G45550 21.212 363 237 7 26 350 37 388 1.04e-15 78.6
MsG0780037667.01.T01 AT5G24960 22.485 338 214 10 27 330 34 357 1.43e-15 77.8
MsG0780037667.01.T01 AT5G47990 22.961 331 207 10 54 348 67 385 1.54e-15 78.2
MsG0780037667.01.T01 AT3G20080 25.581 344 215 12 27 338 43 377 1.90e-15 77.8
MsG0780037667.01.T01 AT3G20080 25.581 344 215 12 27 338 43 377 1.90e-15 77.8
MsG0780037667.01.T01 AT3G20130 22.812 320 202 8 54 338 67 376 1.95e-15 77.8
MsG0780037667.01.T01 AT3G26310 23.262 374 234 13 6 343 14 370 2.36e-15 77.4
MsG0780037667.01.T01 AT5G24960 22.485 338 214 10 27 330 34 357 2.45e-15 77.4
MsG0780037667.01.T01 AT2G30750 24.438 356 224 8 27 350 34 376 2.45e-15 77.4
MsG0780037667.01.T01 AT4G12310 22.024 336 213 7 49 344 63 389 3.04e-15 77.0
MsG0780037667.01.T01 AT3G20120 24.451 319 196 9 54 337 66 374 3.55e-15 77.0
MsG0780037667.01.T01 AT5G04330 20.563 355 230 9 28 342 33 375 4.17e-15 76.6
MsG0780037667.01.T01 AT3G61880 23.164 354 222 10 20 338 57 395 4.62e-15 76.6
MsG0780037667.01.T01 AT3G61880 23.164 354 222 10 20 338 57 395 4.91e-15 76.6
MsG0780037667.01.T01 AT3G32047 21.944 319 205 8 54 338 67 375 7.21e-15 75.9
MsG0780037667.01.T01 AT3G26150 22.222 360 222 11 27 343 31 375 1.61e-14 75.1
MsG0780037667.01.T01 AT3G20960 25.806 279 160 8 100 342 8 275 3.25e-14 73.6
MsG0780037667.01.T01 AT4G15330 25.391 256 143 6 119 337 99 343 1.11e-13 72.4
MsG0780037667.01.T01 AT1G66540 27.899 276 144 10 116 350 3 264 1.77e-13 71.2
MsG0780037667.01.T01 AT5G42590 23.324 343 213 12 23 330 29 356 2.25e-13 71.2
MsG0780037667.01.T01 AT4G15380 23.197 319 204 10 55 342 68 376 2.52e-13 71.2
MsG0780037667.01.T01 AT1G50560 24.843 318 197 10 54 336 68 378 2.82e-13 71.2
MsG0780037667.01.T01 AT3G20120 43.023 86 44 1 252 337 158 238 2.40e-12 67.8
MsG0780037667.01.T01 AT3G20120 43.023 86 44 1 252 337 158 238 2.40e-12 67.8
MsG0780037667.01.T01 AT3G20120 43.023 86 44 1 252 337 158 238 2.40e-12 67.8
MsG0780037667.01.T01 AT2G02580 23.988 346 216 9 23 333 28 361 6.15e-12 67.0
MsG0780037667.01.T01 AT3G26125 30.702 114 68 2 248 350 304 417 1.85e-11 65.5
MsG0780037667.01.T01 AT3G20935 41.573 89 45 2 252 340 123 204 6.60e-11 63.2
MsG0780037667.01.T01 AT1G24540 30.952 126 82 2 231 351 281 406 6.96e-11 63.9
MsG0780037667.01.T01 AT3G20090 22.984 248 148 6 126 338 1 240 9.86e-11 63.2

Find 95 sgRNAs with CRISPR-Local

Find 120 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACAAGCCTCCCCTGCACTTC+TGG 0.187951 7:-30612318 None:intergenic
AGGAACATTATGTTAAATTT+TGG 0.197527 7:+30611973 MsG0780037667.01.T01:CDS
GATTCAATAAACTGAATTTC+TGG 0.227215 7:+30611998 MsG0780037667.01.T01:CDS
CACTAGTTTGCAGTGGATTA+TGG 0.232683 7:+30612278 MsG0780037667.01.T01:CDS
GGAACCAACGGATTCTATTA+AGG 0.266349 7:+30611849 MsG0780037667.01.T01:CDS
GTTGATGTTGTGTTGGTTGC+TGG 0.301099 7:-30611680 None:intergenic
TTCTGAGAACGATTTGAGTT+TGG 0.323857 7:-30611770 None:intergenic
AACAAAATCCTTGTAACTTT+CGG 0.325324 7:-30612021 None:intergenic
GAGGCTTGTGGAGGAGATTC+GGG 0.344078 7:+30612332 MsG0780037667.01.T01:CDS
GGAGGCTTGTGGAGGAGATT+CGG 0.346399 7:+30612331 MsG0780037667.01.T01:CDS
GTATTTGAAGTGTGTGGTTT+TGG 0.357601 7:+30612422 MsG0780037667.01.T01:CDS
AATTGGAAGTTTGTGATGAT+AGG 0.365858 7:-30611460 None:intergenic
GTGTAGAGGGCCGGAGGGAG+GGG 0.365953 7:-30611434 None:intergenic
AGCATGGTCGTTGATGAAAA+TGG 0.366575 7:-30611578 None:intergenic
CAAGCCTCCCCTGCACTTCT+GGG 0.373769 7:-30612317 None:intergenic
CTCAACTTCCGTTTCTCCTC+AGG 0.392147 7:-30612195 None:intergenic
TCAAATCGTTCTCAGAAATT+CGG 0.395015 7:+30611776 MsG0780037667.01.T01:CDS
GTGATGGGTGGTGATGAAAA+TGG 0.396051 7:+30612357 MsG0780037667.01.T01:CDS
GGAGGAGATTCGGGAGGTGA+TGG 0.401832 7:+30612341 MsG0780037667.01.T01:CDS
GGGTACGGTGGTTGTGAAGA+AGG 0.402272 7:-30611414 None:intergenic
TTGGTTGCTGGACAACATTT+TGG 0.403707 7:-30611668 None:intergenic
ATGTGTAGAGGGCCGGAGGG+AGG 0.412508 7:-30611436 None:intergenic
TTTGAGAAAAGGTTCAAGTT+GGG 0.431949 7:-30611500 None:intergenic
TTTCATCAACGACCATGCTC+TGG 0.447065 7:+30611582 MsG0780037667.01.T01:CDS
CCGATATGCACAGTGATGAT+AGG 0.451688 7:-30611544 None:intergenic
GGCCGGAGGGAGGGGTACGG+TGG 0.452701 7:-30611426 None:intergenic
GACGGAGGGTACGCCATGTT+GGG 0.458493 7:-30611717 None:intergenic
AGGAGAGAATGGCTCTGATA+AGG 0.464330 7:-30611394 None:intergenic
CCTATCATCACTGTGCATAT+CGG 0.467994 7:+30611544 MsG0780037667.01.T01:CDS
AGTGATGATAGGACCATGTT+TGG 0.471139 7:-30611533 None:intergenic
GAAGTTGAGTGAGAATGAAA+TGG 0.471918 7:+30612209 MsG0780037667.01.T01:CDS
AGAGAAGGAGGAAGTGAAAG+AGG 0.479510 7:+30612380 MsG0780037667.01.T01:CDS
GAGGAGATTCGGGAGGTGAT+GGG 0.482854 7:+30612342 MsG0780037667.01.T01:CDS
GGTGAAGTACCCAGAAGTGC+AGG 0.489197 7:+30612308 MsG0780037667.01.T01:CDS
TGTGTAGAGGGCCGGAGGGA+GGG 0.491360 7:-30611435 None:intergenic
TCTCAAAACTGCATCAGAAT+CGG 0.493128 7:+30611828 MsG0780037667.01.T01:CDS
ATTTCTGGCCGAAAGTTACA+AGG 0.498788 7:+30612013 MsG0780037667.01.T01:CDS
CGACGGAGGGTACGCCATGT+TGG 0.507594 7:-30611718 None:intergenic
TTGGAAGTAGGAAGAGCTGT+AGG 0.518944 7:-30611649 None:intergenic
GAGGGCCGGAGGGAGGGGTA+CGG 0.519459 7:-30611429 None:intergenic
TCTTTCACCGCGTGTGGCAA+CGG 0.524402 7:-30612477 None:intergenic
AACCACCGTACCCCTCCCTC+CGG 0.525205 7:+30611424 MsG0780037667.01.T01:CDS
CGTTCTCAGAAATTCGGAAG+TGG 0.529374 7:+30611782 MsG0780037667.01.T01:CDS
GTTGCCACACGCGGTGAAAG+AGG 0.531350 7:+30612479 MsG0780037667.01.T01:CDS
GATGAAGCATCTCGGAAGCT+AGG 0.535071 7:-30611744 None:intergenic
GGGTTGAGGCGTCATCCACC+AGG 0.536404 7:+30612447 MsG0780037667.01.T01:CDS
AAGCGGTGTTGATGTTGTGT+TGG 0.536467 7:-30611687 None:intergenic
TAGAGTGGCCTGAGGAGAAA+CGG 0.537603 7:+30612187 MsG0780037667.01.T01:intron
GAGAACGATTTGAGTTTGGA+TGG 0.542895 7:-30611766 None:intergenic
AGGGATGTGTAGAGGGCCGG+AGG 0.544878 7:-30611440 None:intergenic
ATTGGAAGTTTGTGATGATA+GGG 0.549466 7:-30611459 None:intergenic
AGAAGTGCAGGGGAGGCTTG+TGG 0.552108 7:+30612320 MsG0780037667.01.T01:CDS
GGTTGTGAAGAAGGAGAGAA+TGG 0.553440 7:-30611405 None:intergenic
GAAGTTACTTAAGGATCAAG+AGG 0.554302 7:+30612068 MsG0780037667.01.T01:CDS
GATAGGGATGTGTAGAGGGC+CGG 0.554493 7:-30611443 None:intergenic
CTACTTCCACTAGTTTGCAG+TGG 0.563241 7:+30612271 MsG0780037667.01.T01:CDS
AGGAAGACTTGCAGAAACTT+CGG 0.564340 7:+30612400 MsG0780037667.01.T01:CDS
AAAACTCTCCATGCCAAACA+TGG 0.567429 7:+30611520 MsG0780037667.01.T01:CDS
TGTAGGGCGATCAGAGAAGA+TGG 0.570111 7:-30611632 None:intergenic
TGATGAAAATGGAGAGAAGG+AGG 0.573282 7:+30612368 MsG0780037667.01.T01:CDS
TGTGGCAACGGAAATTTCCC+TGG 0.575179 7:-30612465 None:intergenic
ACACGCGGTGAAAGAGGATG+TGG 0.582160 7:+30612485 MsG0780037667.01.T01:CDS
TGCATCAGAATCGGAACCAA+CGG 0.585610 7:+30611837 MsG0780037667.01.T01:CDS
GAGATTCGGGAGGTGATGGG+TGG 0.585951 7:+30612345 MsG0780037667.01.T01:CDS
ACATCCTCTTTCACCGCGTG+TGG 0.587291 7:-30612483 None:intergenic
TGGTGATGAAAATGGAGAGA+AGG 0.590619 7:+30612365 MsG0780037667.01.T01:CDS
TGGAAGTAGGAAGAGCTGTA+GGG 0.592539 7:-30611648 None:intergenic
GTTCTCAGAAATTCGGAAGT+GGG 0.594693 7:+30611783 MsG0780037667.01.T01:CDS
ACTTCGGTATTTGAAGTGTG+TGG 0.600001 7:+30612416 MsG0780037667.01.T01:CDS
TTTGGATGGATGAAGCATCT+CGG 0.600413 7:-30611752 None:intergenic
GTGAAGTACCCAGAAGTGCA+GGG 0.601025 7:+30612309 MsG0780037667.01.T01:CDS
ATAACCTTAATAGAATCCGT+TGG 0.603754 7:-30611853 None:intergenic
CATAATCCACTGCAAACTAG+TGG 0.604191 7:-30612277 None:intergenic
AACATAGCATATTTGAAGTG+TGG 0.608602 7:-30611877 None:intergenic
GGAAGCTAGGTTACGACGGA+GGG 0.613320 7:-30611731 None:intergenic
TGATGATAGGGATGTGTAGA+GGG 0.613902 7:-30611447 None:intergenic
GAACATGGTGAGCCAGAGCA+TGG 0.616363 7:-30611594 None:intergenic
GCAGTGGATTATGGCGAATG+TGG 0.628993 7:+30612287 MsG0780037667.01.T01:CDS
AGTGCAGGGGAGGCTTGTGG+AGG 0.631183 7:+30612323 MsG0780037667.01.T01:CDS
TTTGTTGCGTAACCAATGGG+AGG 0.631893 7:+30612038 MsG0780037667.01.T01:CDS
TGGTCGTTGATGAAAATGGA+AGG 0.632218 7:-30611574 None:intergenic
GGGATGTGTAGAGGGCCGGA+GGG 0.634246 7:-30611439 None:intergenic
TGATAGGACCATGTTTGGCA+TGG 0.635135 7:-30611528 None:intergenic
AGTACCCAGAAGTGCAGGGG+AGG 0.637485 7:+30612313 MsG0780037667.01.T01:CDS
GTGATATTGAGCGTGTACAA+AGG 0.640955 7:+30611953 MsG0780037667.01.T01:CDS
TTTAAATTTAGAGTGGCCTG+AGG 0.641416 7:+30612179 MsG0780037667.01.T01:intron
GTGATGATAGGGATGTGTAG+AGG 0.642345 7:-30611448 None:intergenic
CGGAAGCTAGGTTACGACGG+AGG 0.649330 7:-30611732 None:intergenic
GAAATTTCCGTTGCCACACG+CGG 0.662919 7:+30612470 MsG0780037667.01.T01:CDS
AAATGATGCAGAGAGTAACA+AGG 0.678310 7:-30611370 None:intergenic
TGAAGTACCCAGAAGTGCAG+GGG 0.687304 7:+30612310 MsG0780037667.01.T01:CDS
GGTTGAGGCGTCATCCACCA+GGG 0.702866 7:+30612448 MsG0780037667.01.T01:CDS
TCTCGGAAGCTAGGTTACGA+CGG 0.709312 7:-30611735 None:intergenic
GCTTGTGGAGGAGATTCGGG+AGG 0.721825 7:+30612335 MsG0780037667.01.T01:CDS
GGCAACGGAAATTTCCCTGG+TGG 0.735986 7:-30612462 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AGGAACATTATGTTAAATTT+TGG + Chr7:30611973-30611992 MsG0780037667.01.T01:CDS 20.0%
!!! ATACTCTTTTAAATTTAGAG+TGG + Chr7:30612172-30612191 MsG0780037667.01.T01:intron 20.0%
! AACAAAATCCTTGTAACTTT+CGG - Chr7:30612024-30612043 None:intergenic 25.0%
! GATTCAATAAACTGAATTTC+TGG + Chr7:30611998-30612017 MsG0780037667.01.T01:CDS 25.0%
!!! TTACTTGTTTTCATGTGTTT+TGG + Chr7:30611904-30611923 MsG0780037667.01.T01:CDS 25.0%
AATTGGAAGTTTGTGATGAT+AGG - Chr7:30611463-30611482 None:intergenic 30.0%
ATAACCTTAATAGAATCCGT+TGG - Chr7:30611856-30611875 None:intergenic 30.0%
ATTGGAAGTTTGTGATGATA+GGG - Chr7:30611462-30611481 None:intergenic 30.0%
TCAAATCGTTCTCAGAAATT+CGG + Chr7:30611776-30611795 MsG0780037667.01.T01:CDS 30.0%
! AACATAGCATATTTGAAGTG+TGG - Chr7:30611880-30611899 None:intergenic 30.0%
! CTTTGTTCAGAGTTTTTGAA+CGG + Chr7:30612237-30612256 MsG0780037667.01.T01:CDS 30.0%
! TTTGAGAAAAGGTTCAAGTT+GGG - Chr7:30611503-30611522 None:intergenic 30.0%
!! TTTTGAGAAAAGGTTCAAGT+TGG - Chr7:30611504-30611523 None:intergenic 30.0%
!!! AGATTGATTTTTGGAGCAAT+TGG - Chr7:30611480-30611499 None:intergenic 30.0%
!!! GGAGTTTTTGAAGTTACTTA+AGG + Chr7:30612059-30612078 MsG0780037667.01.T01:CDS 30.0%
AAATGATGCAGAGAGTAACA+AGG - Chr7:30611373-30611392 None:intergenic 35.0%
GAAGTTACTTAAGGATCAAG+AGG + Chr7:30612068-30612087 MsG0780037667.01.T01:CDS 35.0%
GAAGTTGAGTGAGAATGAAA+TGG + Chr7:30612209-30612228 MsG0780037667.01.T01:CDS 35.0%
TCTCAAAACTGCATCAGAAT+CGG + Chr7:30611828-30611847 MsG0780037667.01.T01:CDS 35.0%
! GATTTTGTTGCGTAACCAAT+GGG + Chr7:30612035-30612054 MsG0780037667.01.T01:CDS 35.0%
! TTCTGAGAACGATTTGAGTT+TGG - Chr7:30611773-30611792 None:intergenic 35.0%
! TTTAAATTTAGAGTGGCCTG+AGG + Chr7:30612179-30612198 MsG0780037667.01.T01:intron 35.0%
!! CAAGTTGGGAGATTGATTTT+TGG - Chr7:30611489-30611508 None:intergenic 35.0%
!! GTATTTGAAGTGTGTGGTTT+TGG + Chr7:30612422-30612441 MsG0780037667.01.T01:CDS 35.0%
!!! AACATCAACACCGCTTTTTA+TGG + Chr7:30611694-30611713 MsG0780037667.01.T01:CDS 35.0%
!!! ATTCTGATGCAGTTTTGAGA+CGG - Chr7:30611828-30611847 None:intergenic 35.0%
AAAACTCTCCATGCCAAACA+TGG + Chr7:30611520-30611539 MsG0780037667.01.T01:CDS 40.0%
ACTTCAAAAACTCCTCCCAT+TGG - Chr7:30612053-30612072 None:intergenic 40.0%
AGGAAGACTTGCAGAAACTT+CGG + Chr7:30612400-30612419 MsG0780037667.01.T01:CDS 40.0%
AGTGATGATAGGACCATGTT+TGG - Chr7:30611536-30611555 None:intergenic 40.0%
CATAATCCACTGCAAACTAG+TGG - Chr7:30612280-30612299 None:intergenic 40.0%
CCTATCATCACTGTGCATAT+CGG + Chr7:30611544-30611563 MsG0780037667.01.T01:CDS 40.0%
GTGATATTGAGCGTGTACAA+AGG + Chr7:30611953-30611972 MsG0780037667.01.T01:CDS 40.0%
GTTCTCAGAAATTCGGAAGT+GGG + Chr7:30611783-30611802 MsG0780037667.01.T01:CDS 40.0%
TAAGAGCGAGGAAACAGTTA+AGG + Chr7:30612109-30612128 MsG0780037667.01.T01:intron 40.0%
TGATGAAAATGGAGAGAAGG+AGG + Chr7:30612368-30612387 MsG0780037667.01.T01:CDS 40.0%
TGATGATAGGGATGTGTAGA+GGG - Chr7:30611450-30611469 None:intergenic 40.0%
! ACTTCGGTATTTGAAGTGTG+TGG + Chr7:30612416-30612435 MsG0780037667.01.T01:CDS 40.0%
! AGCATGGTCGTTGATGAAAA+TGG - Chr7:30611581-30611600 None:intergenic 40.0%
! GAGAACGATTTGAGTTTGGA+TGG - Chr7:30611769-30611788 None:intergenic 40.0%
! GGAACCAACGGATTCTATTA+AGG + Chr7:30611849-30611868 MsG0780037667.01.T01:CDS 40.0%
! GGATTTTGTTGCGTAACCAA+TGG + Chr7:30612034-30612053 MsG0780037667.01.T01:CDS 40.0%
! GTTCAGAGTTTTTGAACGGT+GGG + Chr7:30612241-30612260 MsG0780037667.01.T01:CDS 40.0%
! TGGTCGTTGATGAAAATGGA+AGG - Chr7:30611577-30611596 None:intergenic 40.0%
! TGGTGATGAAAATGGAGAGA+AGG + Chr7:30612365-30612384 MsG0780037667.01.T01:CDS 40.0%
! TGTTCAGAGTTTTTGAACGG+TGG + Chr7:30612240-30612259 MsG0780037667.01.T01:CDS 40.0%
! TTGGTTGCTGGACAACATTT+TGG - Chr7:30611671-30611690 None:intergenic 40.0%
! TTTGGATGGATGAAGCATCT+CGG - Chr7:30611755-30611774 None:intergenic 40.0%
!! ATTTCTGGCCGAAAGTTACA+AGG + Chr7:30612013-30612032 MsG0780037667.01.T01:CDS 40.0%
!! CACTAGTTTGCAGTGGATTA+TGG + Chr7:30612278-30612297 MsG0780037667.01.T01:CDS 40.0%
!! CTGGACAACATTTTGGAAGT+AGG - Chr7:30611664-30611683 None:intergenic 40.0%
!!! CTGAGTTTTGAACGAGAACA+TGG - Chr7:30611612-30611631 None:intergenic 40.0%
!!! GCATGGAGAGTTTTGAGAAA+AGG - Chr7:30611514-30611533 None:intergenic 40.0%
!!! TGAAGTGTGTGGTTTTGGAA+GGG + Chr7:30612427-30612446 MsG0780037667.01.T01:CDS 40.0%
!!! TTGAAGTGTGTGGTTTTGGA+AGG + Chr7:30612426-30612445 MsG0780037667.01.T01:CDS 40.0%
AGAGAAGGAGGAAGTGAAAG+AGG + Chr7:30612380-30612399 MsG0780037667.01.T01:CDS 45.0%
CCATGTTGGGCCATAAAAAG+CGG - Chr7:30611707-30611726 None:intergenic 45.0%
CCGATATGCACAGTGATGAT+AGG - Chr7:30611547-30611566 None:intergenic 45.0%
CGTTCTCAGAAATTCGGAAG+TGG + Chr7:30611782-30611801 MsG0780037667.01.T01:CDS 45.0%
GGTTGTGAAGAAGGAGAGAA+TGG - Chr7:30611408-30611427 None:intergenic 45.0%
GTGATGATAGGGATGTGTAG+AGG - Chr7:30611451-30611470 None:intergenic 45.0%
TGATAGGACCATGTTTGGCA+TGG - Chr7:30611531-30611550 None:intergenic 45.0%
TGCATCAGAATCGGAACCAA+CGG + Chr7:30611837-30611856 MsG0780037667.01.T01:CDS 45.0%
TGGAAGTAGGAAGAGCTGTA+GGG - Chr7:30611651-30611670 None:intergenic 45.0%
TGTTTCCTCGCTCTTATCAG+CGG - Chr7:30612105-30612124 None:intergenic 45.0%
TTGGAAGTAGGAAGAGCTGT+AGG - Chr7:30611652-30611671 None:intergenic 45.0%
TTTCATCAACGACCATGCTC+TGG + Chr7:30611582-30611601 MsG0780037667.01.T01:CDS 45.0%
TTTGTTGCGTAACCAATGGG+AGG + Chr7:30612038-30612057 MsG0780037667.01.T01:CDS 45.0%
! CTACTTCCACTAGTTTGCAG+TGG + Chr7:30612271-30612290 MsG0780037667.01.T01:CDS 45.0%
!! AAGCGGTGTTGATGTTGTGT+TGG - Chr7:30611690-30611709 None:intergenic 45.0%
!! AGGAGAGAATGGCTCTGATA+AGG - Chr7:30611397-30611416 None:intergenic 45.0%
!! GTGATGGGTGGTGATGAAAA+TGG + Chr7:30612357-30612376 MsG0780037667.01.T01:CDS 45.0%
!! GTTGATGTTGTGTTGGTTGC+TGG - Chr7:30611683-30611702 None:intergenic 45.0%
CTCAACTTCCGTTTCTCCTC+AGG - Chr7:30612198-30612217 None:intergenic 50.0%
GAAATTTCCGTTGCCACACG+CGG + Chr7:30612470-30612489 MsG0780037667.01.T01:CDS 50.0%
TAGAGTGGCCTGAGGAGAAA+CGG + Chr7:30612187-30612206 MsG0780037667.01.T01:intron 50.0%
TCTCGGAAGCTAGGTTACGA+CGG - Chr7:30611738-30611757 None:intergenic 50.0%
TGTAGGGCGATCAGAGAAGA+TGG - Chr7:30611635-30611654 None:intergenic 50.0%
TGTGGCAACGGAAATTTCCC+TGG - Chr7:30612468-30612487 None:intergenic 50.0%
! GATGAAGCATCTCGGAAGCT+AGG - Chr7:30611747-30611766 None:intergenic 50.0%
! GTGAAGTACCCAGAAGTGCA+GGG + Chr7:30612309-30612328 MsG0780037667.01.T01:CDS 50.0%
! TGAAGTACCCAGAAGTGCAG+GGG + Chr7:30612310-30612329 MsG0780037667.01.T01:CDS 50.0%
!! GCAGTGGATTATGGCGAATG+TGG + Chr7:30612287-30612306 MsG0780037667.01.T01:CDS 50.0%
!!! CCGCTTTTTATGGCCCAACA+TGG + Chr7:30611704-30611723 MsG0780037667.01.T01:CDS 50.0%
!!! GTGTGGTTTTGGAAGGGTTG+AGG + Chr7:30612433-30612452 MsG0780037667.01.T01:CDS 50.0%
ACACGCGGTGAAAGAGGATG+TGG + Chr7:30612485-30612504 MsG0780037667.01.T01:CDS 55.0%
ACATCCTCTTTCACCGCGTG+TGG - Chr7:30612486-30612505 None:intergenic 55.0%
GAACATGGTGAGCCAGAGCA+TGG - Chr7:30611597-30611616 None:intergenic 55.0%
GAGGAGATTCGGGAGGTGAT+GGG + Chr7:30612342-30612361 MsG0780037667.01.T01:CDS 55.0%
GAGGCTTGTGGAGGAGATTC+GGG + Chr7:30612332-30612351 MsG0780037667.01.T01:CDS 55.0%
GATAGGGATGTGTAGAGGGC+CGG - Chr7:30611446-30611465 None:intergenic 55.0%
GGAAGCTAGGTTACGACGGA+GGG - Chr7:30611734-30611753 None:intergenic 55.0%
GGAGGCTTGTGGAGGAGATT+CGG + Chr7:30612331-30612350 MsG0780037667.01.T01:CDS 55.0%
GGCAACGGAAATTTCCCTGG+TGG - Chr7:30612465-30612484 None:intergenic 55.0%
GGGTACGGTGGTTGTGAAGA+AGG - Chr7:30611417-30611436 None:intergenic 55.0%
TCTTTCACCGCGTGTGGCAA+CGG - Chr7:30612480-30612499 None:intergenic 55.0%
TGCTTCCGCTGATAAGAGCG+AGG + Chr7:30612097-30612116 MsG0780037667.01.T01:intron 55.0%
! GGTGAAGTACCCAGAAGTGC+AGG + Chr7:30612308-30612327 MsG0780037667.01.T01:CDS 55.0%
ACAAGCCTCCCCTGCACTTC+TGG - Chr7:30612321-30612340 None:intergenic 60.0%
CAAGCCTCCCCTGCACTTCT+GGG - Chr7:30612320-30612339 None:intergenic 60.0%
CGGAAGCTAGGTTACGACGG+AGG - Chr7:30611735-30611754 None:intergenic 60.0%
GCTTGTGGAGGAGATTCGGG+AGG + Chr7:30612335-30612354 MsG0780037667.01.T01:CDS 60.0%
GGAGGAGATTCGGGAGGTGA+TGG + Chr7:30612341-30612360 MsG0780037667.01.T01:CDS 60.0%
GTTGCCACACGCGGTGAAAG+AGG + Chr7:30612479-30612498 MsG0780037667.01.T01:CDS 60.0%
! AGAAGTGCAGGGGAGGCTTG+TGG + Chr7:30612320-30612339 MsG0780037667.01.T01:CDS 60.0%
! AGTACCCAGAAGTGCAGGGG+AGG + Chr7:30612313-30612332 MsG0780037667.01.T01:CDS 60.0%
! GACGGAGGGTACGCCATGTT+GGG - Chr7:30611720-30611739 None:intergenic 60.0%
! GGTTGAGGCGTCATCCACCA+GGG + Chr7:30612448-30612467 MsG0780037667.01.T01:CDS 60.0%
!! GAGATTCGGGAGGTGATGGG+TGG + Chr7:30612345-30612364 MsG0780037667.01.T01:CDS 60.0%
AACCACCGTACCCCTCCCTC+CGG + Chr7:30611424-30611443 MsG0780037667.01.T01:CDS 65.0%
AGGGATGTGTAGAGGGCCGG+AGG - Chr7:30611443-30611462 None:intergenic 65.0%
AGTGCAGGGGAGGCTTGTGG+AGG + Chr7:30612323-30612342 MsG0780037667.01.T01:CDS 65.0%
ATGTGTAGAGGGCCGGAGGG+AGG - Chr7:30611439-30611458 None:intergenic 65.0%
GGGATGTGTAGAGGGCCGGA+GGG - Chr7:30611442-30611461 None:intergenic 65.0%
TGTGTAGAGGGCCGGAGGGA+GGG - Chr7:30611438-30611457 None:intergenic 65.0%
! CGACGGAGGGTACGCCATGT+TGG - Chr7:30611721-30611740 None:intergenic 65.0%
! GGGTTGAGGCGTCATCCACC+AGG + Chr7:30612447-30612466 MsG0780037667.01.T01:CDS 65.0%
GTGTAGAGGGCCGGAGGGAG+GGG - Chr7:30611437-30611456 None:intergenic 70.0%
GAGGGCCGGAGGGAGGGGTA+CGG - Chr7:30611432-30611451 None:intergenic 75.0%
!! GGCCGGAGGGAGGGGTACGG+TGG - Chr7:30611429-30611448 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
Chr7 gene 30611358 30612512 30611358 ID=MsG0780037667.01;Name=MsG0780037667.01
Chr7 mRNA 30611358 30612512 30611358 ID=MsG0780037667.01.T01;Parent=MsG0780037667.01;Name=MsG0780037667.01.T01;_AED=0.49;_eAED=0.49;_QI=0|0|0|1|1|1|2|0|351
Chr7 exon 30611358 30612092 30611358 ID=MsG0780037667.01.T01:exon:1705;Parent=MsG0780037667.01.T01
Chr7 exon 30612192 30612512 30612192 ID=MsG0780037667.01.T01:exon:1704;Parent=MsG0780037667.01.T01
Chr7 CDS 30611358 30612092 30611358 ID=MsG0780037667.01.T01:cds;Parent=MsG0780037667.01.T01
Chr7 CDS 30612192 30612512 30612192 ID=MsG0780037667.01.T01:cds;Parent=MsG0780037667.01.T01
Gene Sequence

>MsG0780037667.01.T01

ATGGTTCATCGTCCTTGTTACTCTCTGCATCATTTTCCTTATCAGAGCCATTCTCTCCTTCTTCACAACCACCGTACCCCTCCCTCCGGCCCTCTACACATCCCTATCATCACAAACTTCCAATTGCTCCAAAAATCAATCTCCCAACTTGAACCTTTTCTCAAAACTCTCCATGCCAAACATGGTCCTATCATCACTGTGCATATCGGTTCTCGACCTTCCATTTTCATCAACGACCATGCTCTGGCTCACCATGTTCTCGTTCAAAACTCAGCCATCTTCTCTGATCGCCCTACAGCTCTTCCTACTTCCAAAATGTTGTCCAGCAACCAACACAACATCAACACCGCTTTTTATGGCCCAACATGGCGTACCCTCCGTCGTAACCTAGCTTCCGAGATGCTTCATCCATCCAAACTCAAATCGTTCTCAGAAATTCGGAAGTGGGTCTTACGCACTCTCATCAACCGTCTCAAAACTGCATCAGAATCGGAACCAACGGATTCTATTAAGGTTATGCCACACTTCAAATATGCTATGTTCTCTTTACTTGTTTTCATGTGTTTTGGTGAAAGAGTTAACAATGAGAAAATCAGTGATATTGAGCGTGTACAAAGGAACATTATGTTAAATTTTGGCAGATTCAATAAACTGAATTTCTGGCCGAAAGTTACAAGGATTTTGTTGCGTAACCAATGGGAGGAGTTTTTGAAGTTACTTAAGGATCAAGAGGATTGGCCTGAGGAGAAACGGAAGTTGAGTGAGAATGAAATGGTTAATCTTTGTTCAGAGTTTTTGAACGGTGGGACAGACACTACTTCCACTAGTTTGCAGTGGATTATGGCGAATGTGGTGAAGTACCCAGAAGTGCAGGGGAGGCTTGTGGAGGAGATTCGGGAGGTGATGGGTGGTGATGAAAATGGAGAGAAGGAGGAAGTGAAAGAGGAAGACTTGCAGAAACTTCGGTATTTGAAGTGTGTGGTTTTGGAAGGGTTGAGGCGTCATCCACCAGGGAAATTTCCGTTGCCACACGCGGTGAAAGAGGATGTGGTTTGA
Protein sequence

>MsG0780037667.01.T01

MVHRPCYSLHHFPYQSHSLLLHNHRTPPSGPLHIPIITNFQLLQKSISQLEPFLKTLHAKHGPIITVHIGSRPSIFINDHALAHHVLVQNSAIFSDRPTALPTSKMLSSNQHNINTAFYGPTWRTLRRNLASEMLHPSKLKSFSEIRKWVLRTLINRLKTASESEPTDSIKVMPHFKYAMFSLLVFMCFGERVNNEKISDIERVQRNIMLNFGRFNKLNFWPKVTRILLRNQWEEFLKLLKDQEDWPEEKRKLSENEMVNLCSEFLNGGTDTTSTSLQWIMANVVKYPEVQGRLVEEIREVMGGDENGEKEEVKEEDLQKLRYLKCVVLEGLRRHPPGKFPLPHAVKEDVV*