Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780038191.01.T01 | RHN46368.1 | 77.941 | 476 | 105 | 0 | 1 | 476 | 375 | 850 | 0 | 789 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780038191.01.T01 | A0A396H0U1 | 77.941 | 476 | 105 | 0 | 1 | 476 | 375 | 850 | 0.0 | 789 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0380013896.01 | MsG0780038191.01 | 0.812536 | 4.036131e-51 | 2.572978e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780038191.01.T01 | MTR_0143s0020 | 78.151 | 476 | 104 | 0 | 1 | 476 | 1 | 476 | 0.0 | 784 |
| MsG0780038191.01.T01 | MTR_5g470710 | 77.941 | 476 | 105 | 0 | 1 | 476 | 1 | 476 | 0.0 | 782 |
| MsG0780038191.01.T01 | MTR_3g457840 | 77.731 | 476 | 106 | 0 | 1 | 476 | 1 | 476 | 0.0 | 782 |
| MsG0780038191.01.T01 | MTR_7g081465 | 78.151 | 476 | 104 | 0 | 1 | 476 | 1 | 476 | 0.0 | 780 |
| MsG0780038191.01.T01 | MTR_0038s0010 | 78.151 | 476 | 104 | 0 | 1 | 476 | 1 | 476 | 0.0 | 780 |
| MsG0780038191.01.T01 | MTR_2g435990 | 77.521 | 476 | 107 | 0 | 1 | 476 | 1 | 476 | 0.0 | 778 |
| MsG0780038191.01.T01 | MTR_3g049113 | 77.101 | 476 | 109 | 0 | 1 | 476 | 1 | 476 | 0.0 | 778 |
| MsG0780038191.01.T01 | MTR_6g014055 | 77.731 | 476 | 106 | 0 | 1 | 476 | 1 | 476 | 0.0 | 777 |
| MsG0780038191.01.T01 | MTR_5g423980 | 78.151 | 476 | 104 | 0 | 1 | 476 | 1 | 476 | 0.0 | 777 |
| MsG0780038191.01.T01 | MTR_0350s0030 | 77.731 | 476 | 106 | 0 | 1 | 476 | 1 | 476 | 0.0 | 777 |
| MsG0780038191.01.T01 | MTR_3g026088 | 77.521 | 476 | 107 | 0 | 1 | 476 | 1 | 476 | 0.0 | 777 |
| MsG0780038191.01.T01 | MTR_4g465410 | 78.151 | 476 | 104 | 0 | 1 | 476 | 1 | 476 | 0.0 | 776 |
| MsG0780038191.01.T01 | MTR_4g016445 | 77.731 | 476 | 106 | 0 | 1 | 476 | 1 | 476 | 0.0 | 776 |
| MsG0780038191.01.T01 | MTR_6g074695 | 77.521 | 476 | 107 | 0 | 1 | 476 | 1 | 476 | 0.0 | 775 |
| MsG0780038191.01.T01 | MTR_0143s0050 | 78.033 | 478 | 103 | 1 | 1 | 476 | 1 | 478 | 0.0 | 775 |
| MsG0780038191.01.T01 | MTR_2g038655 | 77.521 | 476 | 107 | 0 | 1 | 476 | 1 | 476 | 0.0 | 775 |
| MsG0780038191.01.T01 | MTR_6g046375 | 77.941 | 476 | 105 | 0 | 1 | 476 | 1 | 476 | 0.0 | 774 |
| MsG0780038191.01.T01 | MTR_0089s0050 | 78.587 | 467 | 100 | 0 | 1 | 467 | 108 | 574 | 0.0 | 774 |
| MsG0780038191.01.T01 | MTR_8g047030 | 77.101 | 476 | 109 | 0 | 1 | 476 | 1 | 476 | 0.0 | 774 |
| MsG0780038191.01.T01 | MTR_5g071147 | 77.311 | 476 | 108 | 0 | 1 | 476 | 1 | 476 | 0.0 | 773 |
| MsG0780038191.01.T01 | MTR_3g026875 | 77.615 | 478 | 105 | 1 | 1 | 476 | 1 | 478 | 0.0 | 773 |
| MsG0780038191.01.T01 | MTR_4g044687 | 79.498 | 478 | 96 | 1 | 1 | 476 | 1 | 478 | 0.0 | 773 |
| MsG0780038191.01.T01 | MTR_0029s0020 | 77.824 | 478 | 104 | 1 | 1 | 476 | 1 | 478 | 0.0 | 772 |
| MsG0780038191.01.T01 | MTR_7g071103 | 77.311 | 476 | 108 | 0 | 1 | 476 | 1 | 476 | 0.0 | 772 |
| MsG0780038191.01.T01 | MTR_3g451310 | 77.521 | 476 | 107 | 0 | 1 | 476 | 1 | 476 | 0.0 | 772 |
| MsG0780038191.01.T01 | MTR_4g039657 | 77.521 | 476 | 107 | 0 | 1 | 476 | 1 | 476 | 0.0 | 771 |
| MsG0780038191.01.T01 | MTR_5g078975 | 77.311 | 476 | 108 | 0 | 1 | 476 | 1 | 476 | 0.0 | 770 |
| MsG0780038191.01.T01 | MTR_0089s0130 | 77.197 | 478 | 107 | 1 | 1 | 476 | 1 | 478 | 0.0 | 769 |
| MsG0780038191.01.T01 | MTR_0237s0060 | 76.891 | 476 | 110 | 0 | 1 | 476 | 1 | 476 | 0.0 | 769 |
| MsG0780038191.01.T01 | MTR_8g442840 | 77.197 | 478 | 107 | 1 | 1 | 476 | 1 | 478 | 0.0 | 769 |
| MsG0780038191.01.T01 | MTR_7g046515 | 78.959 | 461 | 97 | 0 | 1 | 461 | 1 | 461 | 0.0 | 768 |
| MsG0780038191.01.T01 | MTR_6g065615 | 77.197 | 478 | 107 | 1 | 1 | 476 | 1 | 478 | 0.0 | 766 |
| MsG0780038191.01.T01 | MTR_6g072867 | 76.987 | 478 | 108 | 1 | 1 | 476 | 1 | 478 | 0.0 | 764 |
| MsG0780038191.01.T01 | MTR_5g060015 | 77.731 | 476 | 104 | 1 | 3 | 476 | 26 | 501 | 0.0 | 763 |
| MsG0780038191.01.T01 | MTR_0089s0070 | 76.987 | 478 | 108 | 1 | 1 | 476 | 1 | 478 | 0.0 | 762 |
| MsG0780038191.01.T01 | MTR_2g090930 | 77.521 | 476 | 107 | 0 | 1 | 476 | 1 | 476 | 0.0 | 759 |
| MsG0780038191.01.T01 | MTR_5g015985 | 77.941 | 476 | 105 | 0 | 1 | 476 | 1 | 476 | 0.0 | 758 |
| MsG0780038191.01.T01 | MTR_5g059485 | 77.311 | 476 | 108 | 0 | 1 | 476 | 1 | 476 | 0.0 | 754 |
| MsG0780038191.01.T01 | MTR_4g043765 | 78.728 | 456 | 97 | 0 | 1 | 456 | 1 | 456 | 0.0 | 753 |
| MsG0780038191.01.T01 | MTR_0336s0030 | 77.311 | 476 | 108 | 0 | 1 | 476 | 1 | 476 | 0.0 | 752 |
| MsG0780038191.01.T01 | MTR_5g095335 | 78.097 | 452 | 99 | 0 | 1 | 452 | 1 | 452 | 0.0 | 748 |
| MsG0780038191.01.T01 | MTR_8g009322 | 76.360 | 478 | 101 | 2 | 1 | 476 | 1 | 468 | 0.0 | 746 |
| MsG0780038191.01.T01 | MTR_7g071873 | 75.630 | 476 | 103 | 2 | 1 | 476 | 1 | 463 | 0.0 | 744 |
| MsG0780038191.01.T01 | MTR_3g026893 | 76.356 | 461 | 98 | 1 | 1 | 461 | 1 | 450 | 0.0 | 730 |
| MsG0780038191.01.T01 | MTR_7g010875 | 72.899 | 476 | 103 | 1 | 1 | 476 | 1 | 450 | 0.0 | 709 |
| MsG0780038191.01.T01 | MTR_6g057540 | 73.109 | 476 | 103 | 2 | 1 | 476 | 24 | 474 | 0.0 | 706 |
| MsG0780038191.01.T01 | MTR_1g051570 | 74.620 | 461 | 92 | 1 | 1 | 461 | 1 | 436 | 0.0 | 704 |
| MsG0780038191.01.T01 | MTR_4g044730 | 73.109 | 476 | 100 | 3 | 3 | 476 | 38 | 487 | 0.0 | 701 |
| MsG0780038191.01.T01 | MTR_0109s0050 | 71.548 | 478 | 108 | 2 | 1 | 476 | 1 | 452 | 0.0 | 689 |
| MsG0780038191.01.T01 | MTR_0124s0070 | 78.606 | 416 | 87 | 1 | 63 | 476 | 7 | 422 | 0.0 | 678 |
| MsG0780038191.01.T01 | MTR_6g072855 | 72.594 | 478 | 111 | 4 | 1 | 476 | 12 | 471 | 0.0 | 677 |
| MsG0780038191.01.T01 | MTR_6g466430 | 69.456 | 478 | 121 | 3 | 1 | 476 | 1 | 455 | 0.0 | 668 |
| MsG0780038191.01.T01 | MTR_4g040010 | 70.502 | 478 | 88 | 4 | 1 | 476 | 25 | 451 | 0.0 | 668 |
| MsG0780038191.01.T01 | MTR_2g065338 | 77.945 | 399 | 88 | 0 | 1 | 399 | 1 | 399 | 0.0 | 648 |
| MsG0780038191.01.T01 | MTR_6g463770 | 66.387 | 476 | 98 | 5 | 1 | 476 | 1 | 414 | 0.0 | 608 |
| MsG0780038191.01.T01 | MTR_7g070985 | 79.479 | 307 | 63 | 0 | 170 | 476 | 1 | 307 | 0.0 | 523 |
| MsG0780038191.01.T01 | MTR_8g051925 | 67.204 | 372 | 69 | 1 | 105 | 476 | 11 | 329 | 2.26e-180 | 508 |
| MsG0780038191.01.T01 | MTR_8g052425 | 71.429 | 343 | 97 | 1 | 1 | 343 | 1 | 342 | 2.05e-177 | 501 |
| MsG0780038191.01.T01 | MTR_5g041255 | 76.897 | 290 | 65 | 1 | 1 | 290 | 1 | 288 | 1.14e-160 | 464 |
| MsG0780038191.01.T01 | MTR_0159s0050 | 77.381 | 252 | 57 | 0 | 1 | 252 | 1 | 252 | 6.69e-140 | 402 |
| MsG0780038191.01.T01 | MTR_3g047715 | 46.171 | 444 | 236 | 2 | 4 | 445 | 8 | 450 | 4.65e-137 | 403 |
| MsG0780038191.01.T01 | MTR_2g082450 | 44.541 | 458 | 249 | 3 | 5 | 457 | 9 | 466 | 8.43e-135 | 397 |
| MsG0780038191.01.T01 | MTR_3g022320 | 43.167 | 461 | 258 | 2 | 1 | 457 | 1 | 461 | 1.92e-133 | 394 |
| MsG0780038191.01.T01 | MTR_6g074500 | 44.541 | 458 | 249 | 3 | 5 | 457 | 9 | 466 | 9.57e-133 | 392 |
| MsG0780038191.01.T01 | MTR_3g013580 | 45.721 | 444 | 235 | 3 | 4 | 443 | 6 | 447 | 1.13e-132 | 392 |
| MsG0780038191.01.T01 | MTR_5g011880 | 42.950 | 461 | 259 | 2 | 1 | 457 | 1 | 461 | 2.19e-132 | 391 |
| MsG0780038191.01.T01 | MTR_8g038320 | 42.733 | 461 | 260 | 2 | 1 | 457 | 1 | 461 | 4.10e-132 | 390 |
| MsG0780038191.01.T01 | MTR_2g049380 | 46.188 | 446 | 231 | 3 | 3 | 443 | 7 | 448 | 7.37e-132 | 390 |
| MsG0780038191.01.T01 | MTR_3g060990 | 42.516 | 461 | 261 | 2 | 1 | 457 | 1 | 461 | 1.32e-131 | 389 |
| MsG0780038191.01.T01 | MTR_5g005270 | 42.827 | 467 | 251 | 4 | 1 | 457 | 1 | 461 | 2.23e-131 | 389 |
| MsG0780038191.01.T01 | MTR_3g058020 | 42.733 | 461 | 260 | 2 | 1 | 457 | 1 | 461 | 2.23e-131 | 389 |
| MsG0780038191.01.T01 | MTR_3g034870 | 42.516 | 461 | 261 | 2 | 1 | 457 | 1 | 461 | 3.67e-131 | 388 |
| MsG0780038191.01.T01 | MTR_0047s0160 | 42.612 | 467 | 252 | 4 | 1 | 457 | 1 | 461 | 5.14e-131 | 387 |
| MsG0780038191.01.T01 | MTR_5g046540 | 43.886 | 458 | 252 | 3 | 5 | 457 | 9 | 466 | 5.84e-131 | 388 |
| MsG0780038191.01.T01 | MTR_3g018710 | 42.672 | 464 | 256 | 4 | 1 | 457 | 1 | 461 | 6.45e-131 | 387 |
| MsG0780038191.01.T01 | MTR_1g053435 | 42.457 | 464 | 257 | 4 | 1 | 457 | 1 | 461 | 2.40e-130 | 386 |
| MsG0780038191.01.T01 | MTR_7g010390 | 42.516 | 461 | 261 | 2 | 1 | 457 | 1 | 461 | 4.22e-130 | 385 |
| MsG0780038191.01.T01 | MTR_4g054440 | 42.612 | 467 | 252 | 4 | 1 | 457 | 1 | 461 | 5.77e-130 | 385 |
| MsG0780038191.01.T01 | MTR_4g031710 | 42.733 | 461 | 259 | 3 | 1 | 457 | 1 | 460 | 3.53e-129 | 383 |
| MsG0780038191.01.T01 | MTR_3g015377 | 43.177 | 447 | 250 | 2 | 1 | 443 | 1 | 447 | 1.28e-128 | 382 |
| MsG0780038191.01.T01 | MTR_0046s0100 | 43.202 | 456 | 254 | 3 | 5 | 456 | 38 | 492 | 5.07e-127 | 378 |
| MsG0780038191.01.T01 | MTR_3g091160 | 43.573 | 459 | 252 | 4 | 4 | 457 | 6 | 462 | 5.17e-127 | 377 |
| MsG0780038191.01.T01 | MTR_3g051650 | 43.573 | 459 | 252 | 4 | 4 | 457 | 6 | 462 | 9.19e-127 | 377 |
| MsG0780038191.01.T01 | MTR_7g006680 | 43.043 | 460 | 255 | 4 | 3 | 457 | 5 | 462 | 6.98e-126 | 374 |
| MsG0780038191.01.T01 | MTR_7g046110 | 43.778 | 450 | 242 | 3 | 4 | 449 | 6 | 448 | 9.66e-126 | 374 |
| MsG0780038191.01.T01 | MTR_0014s0420 | 45.249 | 442 | 239 | 2 | 4 | 443 | 8 | 448 | 2.88e-125 | 373 |
| MsG0780038191.01.T01 | MTR_5g080530 | 43.556 | 450 | 243 | 3 | 4 | 449 | 6 | 448 | 4.45e-125 | 372 |
| MsG0780038191.01.T01 | MTR_0866s0010 | 45.176 | 425 | 224 | 3 | 24 | 443 | 2 | 422 | 3.16e-122 | 371 |
| MsG0780038191.01.T01 | MTR_5g028560 | 44.045 | 445 | 245 | 2 | 3 | 443 | 5 | 449 | 1.67e-121 | 363 |
| MsG0780038191.01.T01 | MTR_7g077015 | 43.255 | 467 | 245 | 7 | 3 | 457 | 7 | 465 | 4.98e-121 | 362 |
| MsG0780038191.01.T01 | MTR_7g028120 | 44.144 | 444 | 244 | 2 | 4 | 443 | 6 | 449 | 9.46e-121 | 361 |
| MsG0780038191.01.T01 | MTR_7g079940 | 43.694 | 444 | 246 | 2 | 4 | 443 | 6 | 449 | 1.77e-120 | 361 |
| MsG0780038191.01.T01 | MTR_4g009470 | 44.027 | 452 | 239 | 5 | 3 | 445 | 7 | 453 | 1.84e-120 | 361 |
| MsG0780038191.01.T01 | MTR_3g046487 | 70.079 | 254 | 47 | 1 | 1 | 254 | 1 | 225 | 3.06e-120 | 351 |
| MsG0780038191.01.T01 | MTR_5g036210 | 43.694 | 444 | 246 | 2 | 4 | 443 | 6 | 449 | 6.22e-120 | 359 |
| MsG0780038191.01.T01 | MTR_1g018990 | 43.694 | 444 | 246 | 2 | 4 | 443 | 6 | 449 | 1.04e-119 | 358 |
| MsG0780038191.01.T01 | MTR_3g100770 | 43.694 | 444 | 246 | 2 | 4 | 443 | 6 | 449 | 1.24e-119 | 358 |
| MsG0780038191.01.T01 | MTR_0029s0060 | 43.624 | 447 | 248 | 2 | 3 | 445 | 5 | 451 | 1.26e-119 | 358 |
| MsG0780038191.01.T01 | MTR_3g082580 | 43.694 | 444 | 246 | 2 | 4 | 443 | 6 | 449 | 1.30e-119 | 358 |
| MsG0780038191.01.T01 | MTR_6g027000 | 43.694 | 444 | 246 | 2 | 4 | 443 | 6 | 449 | 1.88e-119 | 358 |
| MsG0780038191.01.T01 | MTR_5g040810 | 43.468 | 444 | 247 | 2 | 4 | 443 | 6 | 449 | 9.11e-119 | 356 |
| MsG0780038191.01.T01 | MTR_5g015640 | 43.243 | 444 | 248 | 2 | 4 | 443 | 6 | 449 | 2.39e-117 | 353 |
| MsG0780038191.01.T01 | MTR_5g074255 | 43.468 | 444 | 247 | 2 | 4 | 443 | 6 | 449 | 2.50e-117 | 353 |
| MsG0780038191.01.T01 | MTR_5g084310 | 43.820 | 445 | 246 | 2 | 3 | 443 | 5 | 449 | 2.24e-116 | 350 |
| MsG0780038191.01.T01 | MTR_5g085650 | 43.820 | 445 | 246 | 2 | 3 | 443 | 5 | 449 | 2.24e-116 | 350 |
| MsG0780038191.01.T01 | MTR_8g054530 | 41.048 | 458 | 239 | 4 | 5 | 457 | 9 | 440 | 2.50e-114 | 344 |
| MsG0780038191.01.T01 | MTR_6g471550 | 43.653 | 449 | 241 | 4 | 3 | 443 | 7 | 451 | 2.54e-114 | 345 |
| MsG0780038191.01.T01 | MTR_3g023410 | 42.762 | 449 | 245 | 4 | 3 | 443 | 7 | 451 | 3.20e-110 | 335 |
| MsG0780038191.01.T01 | MTR_6g061790 | 42.984 | 449 | 242 | 5 | 4 | 443 | 8 | 451 | 5.55e-110 | 334 |
| MsG0780038191.01.T01 | MTR_3g452070 | 44.693 | 358 | 196 | 1 | 3 | 358 | 7 | 364 | 1.05e-105 | 320 |
| MsG0780038191.01.T01 | MTR_3g046447 | 68.860 | 228 | 44 | 2 | 251 | 476 | 15 | 217 | 1.65e-104 | 310 |
| MsG0780038191.01.T01 | MTR_7g045955 | 37.687 | 467 | 236 | 4 | 1 | 459 | 1 | 420 | 1.68e-104 | 318 |
| MsG0780038191.01.T01 | MTR_3g047220 | 46.296 | 378 | 175 | 7 | 3 | 371 | 7 | 365 | 1.42e-103 | 316 |
| MsG0780038191.01.T01 | MTR_3g020590 | 40.315 | 444 | 239 | 3 | 4 | 443 | 6 | 427 | 2.44e-102 | 313 |
| MsG0780038191.01.T01 | MTR_3g067340 | 38.964 | 444 | 216 | 4 | 4 | 443 | 48 | 440 | 1.53e-101 | 312 |
| MsG0780038191.01.T01 | MTR_1g036610 | 46.467 | 368 | 185 | 4 | 3 | 362 | 7 | 370 | 1.67e-101 | 311 |
| MsG0780038191.01.T01 | MTR_3g451910 | 47.688 | 346 | 176 | 3 | 3 | 345 | 24 | 367 | 6.75e-101 | 309 |
| MsG0780038191.01.T01 | MTR_6g445330 | 76.596 | 188 | 42 | 1 | 290 | 475 | 1 | 188 | 1.19e-98 | 295 |
| MsG0780038191.01.T01 | MTR_3g067475 | 41.972 | 355 | 175 | 3 | 71 | 421 | 2 | 329 | 1.55e-96 | 294 |
| MsG0780038191.01.T01 | MTR_5g086900 | 39.819 | 442 | 220 | 6 | 4 | 443 | 8 | 405 | 6.26e-93 | 288 |
| MsG0780038191.01.T01 | MTR_7g035370 | 35.256 | 468 | 258 | 4 | 4 | 469 | 49 | 473 | 6.13e-92 | 287 |
| MsG0780038191.01.T01 | MTR_0632s0030 | 45.687 | 313 | 168 | 1 | 147 | 457 | 7 | 319 | 6.34e-92 | 282 |
| MsG0780038191.01.T01 | MTR_3g448820 | 76.744 | 172 | 40 | 0 | 1 | 172 | 1 | 172 | 1.49e-87 | 266 |
| MsG0780038191.01.T01 | MTR_0418s0010 | 73.410 | 173 | 46 | 0 | 1 | 173 | 1 | 173 | 3.44e-84 | 257 |
| MsG0780038191.01.T01 | MTR_4g049270 | 39.206 | 403 | 196 | 8 | 4 | 401 | 8 | 366 | 4.54e-83 | 265 |
| MsG0780038191.01.T01 | MTR_6g464470 | 60.435 | 230 | 75 | 3 | 1 | 218 | 1 | 226 | 1.28e-79 | 254 |
| MsG0780038191.01.T01 | MTR_8g470910 | 43.450 | 313 | 146 | 2 | 147 | 457 | 7 | 290 | 3.49e-78 | 246 |
| MsG0780038191.01.T01 | MTR_0260s0010 | 70.950 | 179 | 52 | 0 | 1 | 179 | 1 | 179 | 4.95e-75 | 251 |
| MsG0780038191.01.T01 | MTR_8g466900 | 41.007 | 278 | 114 | 3 | 35 | 312 | 2 | 229 | 5.56e-64 | 208 |
| MsG0780038191.01.T01 | MTR_0048s0010 | 31.059 | 425 | 191 | 8 | 24 | 443 | 2 | 329 | 3.25e-49 | 172 |
| MsG0780038191.01.T01 | MTR_0782s0010 | 33.942 | 274 | 139 | 3 | 170 | 443 | 1 | 232 | 4.62e-47 | 164 |
| MsG0780038191.01.T01 | MTR_6g072130 | 30.203 | 394 | 212 | 12 | 22 | 370 | 33 | 408 | 3.24e-45 | 166 |
| MsG0780038191.01.T01 | MTR_5g081070 | 31.594 | 345 | 203 | 8 | 25 | 358 | 19 | 341 | 3.60e-44 | 159 |
| MsG0780038191.01.T01 | MTR_6g073790 | 69.811 | 106 | 32 | 0 | 1 | 106 | 9 | 114 | 6.80e-43 | 149 |
| MsG0780038191.01.T01 | MTR_6g084020 | 31.378 | 341 | 183 | 9 | 22 | 336 | 14 | 329 | 1.13e-40 | 149 |
| MsG0780038191.01.T01 | MTR_0094s0100 | 34.722 | 216 | 121 | 2 | 237 | 451 | 1 | 197 | 1.26e-35 | 132 |
| MsG0780038191.01.T01 | MTR_3g053450 | 42.208 | 154 | 77 | 2 | 146 | 294 | 3 | 149 | 3.60e-31 | 118 |
| MsG0780038191.01.T01 | MTR_6g034655 | 73.529 | 68 | 18 | 0 | 1 | 68 | 1 | 68 | 6.96e-27 | 105 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 148 sgRNAs with CRISPR-Local
Find 149 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGTTCAAGGAAGTGTATT+TGG | 0.224583 | 7:+41880215 | MsG0780038191.01.T01:CDS |
| TTTCTTAATGTACCTCTTCT+TGG | 0.235239 | 7:+41880981 | MsG0780038191.01.T01:CDS |
| GTTGTGTGTCTCTCCTTTAT+AGG | 0.246755 | 7:+41880811 | MsG0780038191.01.T01:CDS |
| GTCTATTTCACAGAGGATTA+TGG | 0.291055 | 7:+41880884 | MsG0780038191.01.T01:CDS |
| CTCTAGTGCAATTCTATAAT+CGG | 0.299442 | 7:+41880349 | MsG0780038191.01.T01:CDS |
| AGCCTTAGTGACAAGATTCT+TGG | 0.309806 | 7:-41880541 | None:intergenic |
| CAAGATTTGGAAAGAGAATA+AGG | 0.316515 | 7:-41880665 | None:intergenic |
| CGAGGCTTATTCTTGCTTGA+TGG | 0.322553 | 7:+41880419 | MsG0780038191.01.T01:CDS |
| GAGCTCGCCTTGCGACAATT+TGG | 0.329437 | 7:+41881032 | MsG0780038191.01.T01:CDS |
| GTGAAATAAACCACCTATAA+AGG | 0.333021 | 7:-41880824 | None:intergenic |
| CAAAGTAGGAACCGGATTCT+TGG | 0.344993 | 7:-41880727 | None:intergenic |
| AATGTATCCTCGACCCTTGC+CGG | 0.347688 | 7:-41880784 | None:intergenic |
| GAGAGATTGAAGAGAAAGAT+AGG | 0.351130 | 7:+41881495 | MsG0780038191.01.T01:CDS |
| CAGTGGAGGACTAGATACTA+TGG | 0.354705 | 7:+41881380 | MsG0780038191.01.T01:CDS |
| ATACACTTCCTTGAACTTGT+AGG | 0.366192 | 7:-41880211 | None:intergenic |
| AGAGTCAAGGAAATCATCTT+TGG | 0.366614 | 7:+41880948 | MsG0780038191.01.T01:CDS |
| TCCACGACAATCCGGAGAAT+TGG | 0.368047 | 7:+41880862 | MsG0780038191.01.T01:CDS |
| TCCACGAAGTCATCAAGATT+TGG | 0.368220 | 7:-41880678 | None:intergenic |
| TTTGGCTAGTCTGAGAGATT+TGG | 0.371353 | 7:+41880233 | MsG0780038191.01.T01:CDS |
| ATCCTTGCACTCCTCATCTA+TGG | 0.384361 | 7:+41880642 | MsG0780038191.01.T01:CDS |
| CTGGTTTCCGACATCGTTAC+GGG | 0.384887 | 7:+41880277 | MsG0780038191.01.T01:CDS |
| TCACTCCTAATGAAGTAGTT+TGG | 0.385989 | 7:+41880910 | MsG0780038191.01.T01:CDS |
| GTAAGCCAAACTACTTCATT+AGG | 0.394694 | 7:-41880915 | None:intergenic |
| TGAGAACTTGATTATGACTT+TGG | 0.405210 | 7:+41881406 | MsG0780038191.01.T01:CDS |
| AGGAATAAGAGAAGATTTCA+TGG | 0.409651 | 7:+41881127 | MsG0780038191.01.T01:CDS |
| AATTGTCGCAAGGCGAGCTC+CGG | 0.410697 | 7:-41881029 | None:intergenic |
| TCTTATTCCTGTGGGAGCAT+TGG | 0.416351 | 7:-41881114 | None:intergenic |
| GTTTATCACCCACCGTGTAT+AGG | 0.422018 | 7:-41881219 | None:intergenic |
| CTGTGGGAGCATTGGAATAG+TGG | 0.427847 | 7:-41881106 | None:intergenic |
| AGGAGATGTAGCAAGATTGA+TGG | 0.436231 | 7:-41881075 | None:intergenic |
| ACCTACTCAGGAGATGTATC+AGG | 0.438160 | 7:+41881325 | MsG0780038191.01.T01:CDS |
| TCCAAATCTTGATGACTTCG+TGG | 0.439528 | 7:+41880677 | MsG0780038191.01.T01:CDS |
| GAAGAAAGAGGTGAAACATA+TGG | 0.444468 | 7:+41881169 | MsG0780038191.01.T01:CDS |
| ATGTACCTCTTCTTGGTACC+CGG | 0.445039 | 7:+41880988 | MsG0780038191.01.T01:CDS |
| TTGGAATAGTGGAAGAAGTA+AGG | 0.445888 | 7:-41881095 | None:intergenic |
| ACTGGTTTCCGACATCGTTA+CGG | 0.455402 | 7:+41880276 | MsG0780038191.01.T01:CDS |
| GAAGTCTTTCCACGACAATC+CGG | 0.459234 | 7:+41880854 | MsG0780038191.01.T01:CDS |
| GCTTCTCATCCACATTAGTC+TGG | 0.462949 | 7:-41880317 | None:intergenic |
| GCATCTAGCTATGGAGAGTC+GGG | 0.465425 | 7:+41881349 | MsG0780038191.01.T01:CDS |
| AGGTGAAACATATGGGTGTA+AGG | 0.472691 | 7:+41881177 | MsG0780038191.01.T01:CDS |
| AATCTTCCACTCCAAGAATC+CGG | 0.478570 | 7:+41880716 | MsG0780038191.01.T01:CDS |
| GATCGATCCGGCAAGGGTCG+AGG | 0.479622 | 7:+41880777 | MsG0780038191.01.T01:CDS |
| TCACCTCAAGACCACTTGTC+AGG | 0.483265 | 7:+41880605 | MsG0780038191.01.T01:CDS |
| CTCCAAGAATCTTGTCACTA+AGG | 0.485436 | 7:+41880539 | MsG0780038191.01.T01:CDS |
| AGCATCTAGCTATGGAGAGT+CGG | 0.488579 | 7:+41881348 | MsG0780038191.01.T01:CDS |
| AACTTGATTATGACTTTGGA+TGG | 0.492404 | 7:+41881410 | MsG0780038191.01.T01:CDS |
| AAACATATGGGTGTAAGGTC+TGG | 0.494500 | 7:+41881182 | MsG0780038191.01.T01:CDS |
| GACTAAGTCCTACAAGTTCA+AGG | 0.498146 | 7:+41880203 | MsG0780038191.01.T01:CDS |
| ATAAACCAAGCTGAGGAGAT+TGG | 0.498676 | 7:+41881236 | MsG0780038191.01.T01:CDS |
| TCAGCTAGCAAAGTAGGAAC+CGG | 0.498881 | 7:-41880735 | None:intergenic |
| AGATTTGGCACTCAAGATTG+AGG | 0.504127 | 7:+41880248 | MsG0780038191.01.T01:CDS |
| GAGAAGATTTCATGGAAGCT+TGG | 0.505435 | 7:+41881135 | MsG0780038191.01.T01:CDS |
| CACTATTCCAATGCTCCCAC+AGG | 0.507545 | 7:+41881107 | MsG0780038191.01.T01:CDS |
| TGCTTATGAGAGACTCTAAG+AGG | 0.512630 | 7:+41881519 | MsG0780038191.01.T01:CDS |
| GTGGGCATTAACTGAAAGTC+GGG | 0.512762 | 7:-41880393 | None:intergenic |
| GGAGATGTAGCAAGATTGAT+GGG | 0.512822 | 7:-41881074 | None:intergenic |
| ATGGATCTATCTATTGCTAA+GGG | 0.515533 | 7:+41880438 | MsG0780038191.01.T01:CDS |
| ATTTCCTTGACTCTAGAAGC+TGG | 0.516245 | 7:-41880939 | None:intergenic |
| TGAGAATCCTCCTACTCCAT+TGG | 0.516424 | 7:+41880479 | MsG0780038191.01.T01:CDS |
| GCTTCCACTTCCTATGCTTG+AGG | 0.520919 | 7:+41881605 | MsG0780038191.01.T01:CDS |
| GATGGATCTATCTATTGCTA+AGG | 0.523308 | 7:+41880437 | MsG0780038191.01.T01:CDS |
| TGTACCTCTTCTTGGTACCC+GGG | 0.524285 | 7:+41880989 | MsG0780038191.01.T01:CDS |
| ATTGTCGCAAGGCGAGCTCC+GGG | 0.528304 | 7:-41881028 | None:intergenic |
| GAAATCTTCTCTTATTCCTG+TGG | 0.533656 | 7:-41881123 | None:intergenic |
| CATGCTATTCACGATCGATC+CGG | 0.539135 | 7:+41880765 | MsG0780038191.01.T01:CDS |
| AAATCTTCTCTTATTCCTGT+GGG | 0.540613 | 7:-41881122 | None:intergenic |
| TCTAGTGCAATTCTATAATC+GGG | 0.541065 | 7:+41880350 | MsG0780038191.01.T01:CDS |
| GTTATAGTTGATGCCACCCC+GGG | 0.543740 | 7:-41881006 | None:intergenic |
| AAGGAAATCATCTTTGGTGG+TGG | 0.544560 | 7:+41880954 | MsG0780038191.01.T01:CDS |
| AAGAAAGAGGTGAAACATAT+GGG | 0.545380 | 7:+41881170 | MsG0780038191.01.T01:CDS |
| TATGTGTCAGCTAGCAAAGT+AGG | 0.548247 | 7:-41880741 | None:intergenic |
| AGTGGAGGACTAGATACTAT+GGG | 0.549566 | 7:+41881381 | MsG0780038191.01.T01:CDS |
| TGGAAGCTTGGTCTAAACTT+CGG | 0.550551 | 7:+41881147 | MsG0780038191.01.T01:CDS |
| GTGTGTCTCTCCTTTATAGG+TGG | 0.553748 | 7:+41880814 | MsG0780038191.01.T01:CDS |
| GTCTAAACTTCGGAAGAAAG+AGG | 0.553959 | 7:+41881157 | MsG0780038191.01.T01:CDS |
| GTCAAGGAAATCATCTTTGG+TGG | 0.555236 | 7:+41880951 | MsG0780038191.01.T01:CDS |
| GCAATAACCAATGGAGTAGG+AGG | 0.555419 | 7:-41880486 | None:intergenic |
| TACTCCAGCTTCTAGAGTCA+AGG | 0.555642 | 7:+41880935 | MsG0780038191.01.T01:CDS |
| TGCAGACACGTATCTCATAG+AGG | 0.559698 | 7:-41881270 | None:intergenic |
| GGCCATAGATGAGGAGTGCA+AGG | 0.559757 | 7:-41880644 | None:intergenic |
| AATTCTATAATCGGGACTAT+CGG | 0.561339 | 7:+41880358 | MsG0780038191.01.T01:CDS |
| AAGGTCTGGTATTGCTCATG+AGG | 0.561441 | 7:+41881196 | MsG0780038191.01.T01:CDS |
| GATTATGACTTTGGATGGAA+AGG | 0.563083 | 7:+41881415 | MsG0780038191.01.T01:CDS |
| AGAGTCGGGAGAAGCATCAG+TGG | 0.564445 | 7:+41881363 | MsG0780038191.01.T01:CDS |
| GTAGGTGGTAGTAGAGGCAA+AGG | 0.564660 | 7:-41881308 | None:intergenic |
| GTATCAGGAGCATCTAGCTA+TGG | 0.564905 | 7:+41881340 | MsG0780038191.01.T01:CDS |
| GCATACCAATCTCCTCAGCT+TGG | 0.565430 | 7:-41881241 | None:intergenic |
| TGTGAAATAGACCAATTCTC+CGG | 0.567161 | 7:-41880873 | None:intergenic |
| AGGATTCTCAAGTCCTGCGA+AGG | 0.567679 | 7:-41880466 | None:intergenic |
| GTCACTAAGGCTCGCATCCG+AGG | 0.567814 | 7:+41880552 | MsG0780038191.01.T01:CDS |
| AGAGACTCTAAGAGGGCTAG+AGG | 0.569179 | 7:+41881527 | MsG0780038191.01.T01:CDS |
| AGATCCTCAAGCATAGGAAG+TGG | 0.573357 | 7:-41881609 | None:intergenic |
| GTAAAGCCCCGTAACGATGT+CGG | 0.573482 | 7:-41880284 | None:intergenic |
| ATAGATGAGGAGTGCAAGGA+TGG | 0.574346 | 7:-41880640 | None:intergenic |
| AGTAGAGGCAAAGGCATGGT+AGG | 0.575726 | 7:-41881299 | None:intergenic |
| ACGTATCTCATAGAGGGGTA+AGG | 0.576938 | 7:-41881263 | None:intergenic |
| TTCAAGAGTGTCCTGACAAG+TGG | 0.580115 | 7:-41880616 | None:intergenic |
| GCAGACACGTATCTCATAGA+GGG | 0.583209 | 7:-41881269 | None:intergenic |
| TGTGGGCATTAACTGAAAGT+CGG | 0.584921 | 7:-41880394 | None:intergenic |
| GGTTATAGTTGATGCCACCC+CGG | 0.586613 | 7:-41881007 | None:intergenic |
| CAAGAATAAGCCTCGAGTGT+GGG | 0.590782 | 7:-41880411 | None:intergenic |
| CTCAAGATTGAGGATCCGAC+TGG | 0.591485 | 7:+41880258 | MsG0780038191.01.T01:CDS |
| AGTATCGTGCATAGAAGTCA+CGG | 0.592453 | 7:-41881553 | None:intergenic |
| TCAGTTAATGCCCACACTCG+AGG | 0.596019 | 7:+41880401 | MsG0780038191.01.T01:CDS |
| TATTCACGATCGATCCGGCA+AGG | 0.596475 | 7:+41880770 | MsG0780038191.01.T01:CDS |
| GTCGGGAGAAGCATCAGTGG+AGG | 0.598108 | 7:+41881366 | MsG0780038191.01.T01:CDS |
| AGAGAATAAGGCCATAGATG+AGG | 0.598418 | 7:-41880653 | None:intergenic |
| ACCAATTCTCCGGATTGTCG+TGG | 0.598960 | 7:-41880863 | None:intergenic |
| GGATCTATCTATTGCTAAGG+GGG | 0.599212 | 7:+41880440 | MsG0780038191.01.T01:CDS |
| GCCTCTACTACCACCTACTC+AGG | 0.600265 | 7:+41881313 | MsG0780038191.01.T01:CDS |
| AAATGGAGATCCTCAAGCAT+AGG | 0.601609 | 7:-41881615 | None:intergenic |
| TGATACATCTCCTGAGTAGG+TGG | 0.602402 | 7:-41881323 | None:intergenic |
| TGTCGTGGAAAGACTTCGGA+AGG | 0.604879 | 7:-41880848 | None:intergenic |
| TGGTAGTAGAGGCAAAGGCA+TGG | 0.610248 | 7:-41881303 | None:intergenic |
| GATACTCGGAAGTGAATCCT+CGG | 0.610662 | 7:-41880569 | None:intergenic |
| GCAAGAATAAGCCTCGAGTG+TGG | 0.611834 | 7:-41880412 | None:intergenic |
| TAGGAACCGGATTCTTGGAG+TGG | 0.612664 | 7:-41880722 | None:intergenic |
| TCCTGAGTAGGTGGTAGTAG+AGG | 0.612779 | 7:-41881314 | None:intergenic |
| CAGCTATGAGTCTGAGTCTG+AGG | 0.613643 | 7:+41881577 | MsG0780038191.01.T01:CDS |
| CCACCCCGGGTACCAAGAAG+AGG | 0.614269 | 7:-41880993 | None:intergenic |
| ACTGAAGAAAGAGTTAGCTA+AGG | 0.614736 | 7:+41881466 | MsG0780038191.01.T01:CDS |
| TACTATTCTCCAGACTAATG+TGG | 0.615168 | 7:+41880308 | MsG0780038191.01.T01:CDS |
| TTAGCAATAACCAATGGAGT+AGG | 0.616486 | 7:-41880489 | None:intergenic |
| CCTCTTCTTGGTACCCGGGG+TGG | 0.618143 | 7:+41880993 | MsG0780038191.01.T01:CDS |
| ATTCACGATCGATCCGGCAA+GGG | 0.618973 | 7:+41880771 | MsG0780038191.01.T01:CDS |
| CGGGAAACCAAATTGTCGCA+AGG | 0.619270 | 7:-41881039 | None:intergenic |
| TAACGATGTCGGAAACCAGT+CGG | 0.625510 | 7:-41880273 | None:intergenic |
| AGATCTTTAGCAATAACCAA+TGG | 0.626858 | 7:-41880495 | None:intergenic |
| GTATCGTGCATAGAAGTCAC+GGG | 0.630427 | 7:-41881552 | None:intergenic |
| GTACCTCTTCTTGGTACCCG+GGG | 0.633568 | 7:+41880990 | MsG0780038191.01.T01:CDS |
| TGTCCTGACAAGTGGTCTTG+AGG | 0.633579 | 7:-41880608 | None:intergenic |
| TCCTGATACATCTCCTGAGT+AGG | 0.641029 | 7:-41881326 | None:intergenic |
| GGGTGGCATCAACTATAACC+CGG | 0.641340 | 7:+41881010 | MsG0780038191.01.T01:CDS |
| GGATTGTCGTGGAAAGACTT+CGG | 0.643124 | 7:-41880852 | None:intergenic |
| TGGTTTCCGACATCGTTACG+GGG | 0.646287 | 7:+41880278 | MsG0780038191.01.T01:CDS |
| GACAAGATTCTTGGAGACAT+CGG | 0.649605 | 7:-41880532 | None:intergenic |
| TGGATCTATCTATTGCTAAG+GGG | 0.652551 | 7:+41880439 | MsG0780038191.01.T01:CDS |
| GGATTCTCAAGTCCTGCGAA+GGG | 0.656834 | 7:-41880465 | None:intergenic |
| TCATGAGGCCTATACACGGT+GGG | 0.658157 | 7:+41881211 | MsG0780038191.01.T01:CDS |
| AAGATTCTTGGAGACATCGG+TGG | 0.663637 | 7:-41880529 | None:intergenic |
| GCTTATGAGAGACTCTAAGA+GGG | 0.668231 | 7:+41881520 | MsG0780038191.01.T01:CDS |
| TTGCTCATGAGGCCTATACA+CGG | 0.671904 | 7:+41881207 | MsG0780038191.01.T01:CDS |
| GTGGGTGATAAACCAAGCTG+AGG | 0.679807 | 7:+41881229 | MsG0780038191.01.T01:CDS |
| GGATGAGCAGAAGACTCATG+AGG | 0.683750 | 7:+41881436 | MsG0780038191.01.T01:CDS |
| CTCATGAGGCCTATACACGG+TGG | 0.686008 | 7:+41881210 | MsG0780038191.01.T01:CDS |
| CAGACACGTATCTCATAGAG+GGG | 0.715906 | 7:-41881268 | None:intergenic |
| GTGGAGGACTAGATACTATG+GGG | 0.719677 | 7:+41881382 | MsG0780038191.01.T01:CDS |
| AGAATTGGTCTATTTCACAG+AGG | 0.721523 | 7:+41880877 | MsG0780038191.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGATTTTTCAAGTAGATACT+CGG | - | Chr7:41880586-41880605 | None:intergenic | 25.0% |
| AAATCTTCTCTTATTCCTGT+GGG | - | Chr7:41881125-41881144 | None:intergenic | 30.0% | |
| AACTTGATTATGACTTTGGA+TGG | + | Chr7:41881410-41881429 | MsG0780038191.01.T01:CDS | 30.0% | |
| AAGAAAGAGGTGAAACATAT+GGG | + | Chr7:41881170-41881189 | MsG0780038191.01.T01:CDS | 30.0% | |
| AATTCTATAATCGGGACTAT+CGG | + | Chr7:41880358-41880377 | MsG0780038191.01.T01:CDS | 30.0% | |
| AGATCTTTAGCAATAACCAA+TGG | - | Chr7:41880498-41880517 | None:intergenic | 30.0% | |
| AGGAATAAGAGAAGATTTCA+TGG | + | Chr7:41881127-41881146 | MsG0780038191.01.T01:CDS | 30.0% | |
| ATGGATCTATCTATTGCTAA+GGG | + | Chr7:41880438-41880457 | MsG0780038191.01.T01:CDS | 30.0% | |
| CAAGATTTGGAAAGAGAATA+AGG | - | Chr7:41880668-41880687 | None:intergenic | 30.0% | |
| CTCTAGTGCAATTCTATAAT+CGG | + | Chr7:41880349-41880368 | MsG0780038191.01.T01:CDS | 30.0% | |
| GTGAAATAAACCACCTATAA+AGG | - | Chr7:41880827-41880846 | None:intergenic | 30.0% | |
| TCTAGTGCAATTCTATAATC+GGG | + | Chr7:41880350-41880369 | MsG0780038191.01.T01:CDS | 30.0% | |
| TGAGAACTTGATTATGACTT+TGG | + | Chr7:41881406-41881425 | MsG0780038191.01.T01:CDS | 30.0% | |
| TTTCTTAATGTACCTCTTCT+TGG | + | Chr7:41880981-41881000 | MsG0780038191.01.T01:CDS | 30.0% | |
| !!! | TTGATGGGTTTTTCTTTCAT+CGG | - | Chr7:41881062-41881081 | None:intergenic | 30.0% |
| ACTGAAGAAAGAGTTAGCTA+AGG | + | Chr7:41881466-41881485 | MsG0780038191.01.T01:CDS | 35.0% | |
| AGAGTCAAGGAAATCATCTT+TGG | + | Chr7:41880948-41880967 | MsG0780038191.01.T01:CDS | 35.0% | |
| ATACACTTCCTTGAACTTGT+AGG | - | Chr7:41880214-41880233 | None:intergenic | 35.0% | |
| GAAATCTTCTCTTATTCCTG+TGG | - | Chr7:41881126-41881145 | None:intergenic | 35.0% | |
| GAAGAAAGAGGTGAAACATA+TGG | + | Chr7:41881169-41881188 | MsG0780038191.01.T01:CDS | 35.0% | |
| GAGAGATTGAAGAGAAAGAT+AGG | + | Chr7:41881495-41881514 | MsG0780038191.01.T01:CDS | 35.0% | |
| GATGGATCTATCTATTGCTA+AGG | + | Chr7:41880437-41880456 | MsG0780038191.01.T01:CDS | 35.0% | |
| GATTATGACTTTGGATGGAA+AGG | + | Chr7:41881415-41881434 | MsG0780038191.01.T01:CDS | 35.0% | |
| GTAAGCCAAACTACTTCATT+AGG | - | Chr7:41880918-41880937 | None:intergenic | 35.0% | |
| GTCTATTTCACAGAGGATTA+TGG | + | Chr7:41880884-41880903 | MsG0780038191.01.T01:CDS | 35.0% | |
| TACTATTCTCCAGACTAATG+TGG | + | Chr7:41880308-41880327 | MsG0780038191.01.T01:CDS | 35.0% | |
| TCACTCCTAATGAAGTAGTT+TGG | + | Chr7:41880910-41880929 | MsG0780038191.01.T01:CDS | 35.0% | |
| TGGATCTATCTATTGCTAAG+GGG | + | Chr7:41880439-41880458 | MsG0780038191.01.T01:CDS | 35.0% | |
| TGTGAAATAGACCAATTCTC+CGG | - | Chr7:41880876-41880895 | None:intergenic | 35.0% | |
| TTAGCAATAACCAATGGAGT+AGG | - | Chr7:41880492-41880511 | None:intergenic | 35.0% | |
| ! | AGAATTGGTCTATTTCACAG+AGG | + | Chr7:41880877-41880896 | MsG0780038191.01.T01:CDS | 35.0% |
| ! | CAAGTTCAAGGAAGTGTATT+TGG | + | Chr7:41880215-41880234 | MsG0780038191.01.T01:CDS | 35.0% |
| ! | TTGGAATAGTGGAAGAAGTA+AGG | - | Chr7:41881098-41881117 | None:intergenic | 35.0% |
| !!! | TGATGGGTTTTTCTTTCATC+GGG | - | Chr7:41881061-41881080 | None:intergenic | 35.0% |
| AAACATATGGGTGTAAGGTC+TGG | + | Chr7:41881182-41881201 | MsG0780038191.01.T01:CDS | 40.0% | |
| AAGGAAATCATCTTTGGTGG+TGG | + | Chr7:41880954-41880973 | MsG0780038191.01.T01:CDS | 40.0% | |
| AATCTTCCACTCCAAGAATC+CGG | + | Chr7:41880716-41880735 | MsG0780038191.01.T01:CDS | 40.0% | |
| AGAGAATAAGGCCATAGATG+AGG | - | Chr7:41880656-41880675 | None:intergenic | 40.0% | |
| AGATTTGGCACTCAAGATTG+AGG | + | Chr7:41880248-41880267 | MsG0780038191.01.T01:CDS | 40.0% | |
| AGCCTTAGTGACAAGATTCT+TGG | - | Chr7:41880544-41880563 | None:intergenic | 40.0% | |
| AGGAGATGTAGCAAGATTGA+TGG | - | Chr7:41881078-41881097 | None:intergenic | 40.0% | |
| AGGTGAAACATATGGGTGTA+AGG | + | Chr7:41881177-41881196 | MsG0780038191.01.T01:CDS | 40.0% | |
| AGTATCGTGCATAGAAGTCA+CGG | - | Chr7:41881556-41881575 | None:intergenic | 40.0% | |
| AGTGGAGGACTAGATACTAT+GGG | + | Chr7:41881381-41881400 | MsG0780038191.01.T01:CDS | 40.0% | |
| ATAAACCAAGCTGAGGAGAT+TGG | + | Chr7:41881236-41881255 | MsG0780038191.01.T01:CDS | 40.0% | |
| CTCCAAGAATCTTGTCACTA+AGG | + | Chr7:41880539-41880558 | MsG0780038191.01.T01:CDS | 40.0% | |
| GACAAGATTCTTGGAGACAT+CGG | - | Chr7:41880535-41880554 | None:intergenic | 40.0% | |
| GACTAAGTCCTACAAGTTCA+AGG | + | Chr7:41880203-41880222 | MsG0780038191.01.T01:CDS | 40.0% | |
| GAGAAGATTTCATGGAAGCT+TGG | + | Chr7:41881135-41881154 | MsG0780038191.01.T01:CDS | 40.0% | |
| GGAGATGTAGCAAGATTGAT+GGG | - | Chr7:41881077-41881096 | None:intergenic | 40.0% | |
| GGATCTATCTATTGCTAAGG+GGG | + | Chr7:41880440-41880459 | MsG0780038191.01.T01:CDS | 40.0% | |
| GTCAAGGAAATCATCTTTGG+TGG | + | Chr7:41880951-41880970 | MsG0780038191.01.T01:CDS | 40.0% | |
| GTCTAAACTTCGGAAGAAAG+AGG | + | Chr7:41881157-41881176 | MsG0780038191.01.T01:CDS | 40.0% | |
| GTTGTGTGTCTCTCCTTTAT+AGG | + | Chr7:41880811-41880830 | MsG0780038191.01.T01:CDS | 40.0% | |
| TATGTGTCAGCTAGCAAAGT+AGG | - | Chr7:41880744-41880763 | None:intergenic | 40.0% | |
| TCCACGAAGTCATCAAGATT+TGG | - | Chr7:41880681-41880700 | None:intergenic | 40.0% | |
| TGCTTATGAGAGACTCTAAG+AGG | + | Chr7:41881519-41881538 | MsG0780038191.01.T01:CDS | 40.0% | |
| TGGAAGCTTGGTCTAAACTT+CGG | + | Chr7:41881147-41881166 | MsG0780038191.01.T01:CDS | 40.0% | |
| TGTGGGCATTAACTGAAAGT+CGG | - | Chr7:41880397-41880416 | None:intergenic | 40.0% | |
| ! | ATTTCCTTGACTCTAGAAGC+TGG | - | Chr7:41880942-41880961 | None:intergenic | 40.0% |
| ! | GCTTATGAGAGACTCTAAGA+GGG | + | Chr7:41881520-41881539 | MsG0780038191.01.T01:CDS | 40.0% |
| ! | TCCAAATCTTGATGACTTCG+TGG | + | Chr7:41880677-41880696 | MsG0780038191.01.T01:CDS | 40.0% |
| !! | TTTGGCTAGTCTGAGAGATT+TGG | + | Chr7:41880233-41880252 | MsG0780038191.01.T01:CDS | 40.0% |
| AAGATTCTTGGAGACATCGG+TGG | - | Chr7:41880532-41880551 | None:intergenic | 45.0% | |
| AAGGTCTGGTATTGCTCATG+AGG | + | Chr7:41881196-41881215 | MsG0780038191.01.T01:CDS | 45.0% | |
| ACCTACTCAGGAGATGTATC+AGG | + | Chr7:41881325-41881344 | MsG0780038191.01.T01:CDS | 45.0% | |
| ACGTATCTCATAGAGGGGTA+AGG | - | Chr7:41881266-41881285 | None:intergenic | 45.0% | |
| AGCATCTAGCTATGGAGAGT+CGG | + | Chr7:41881348-41881367 | MsG0780038191.01.T01:CDS | 45.0% | |
| ATCCTTGCACTCCTCATCTA+TGG | + | Chr7:41880642-41880661 | MsG0780038191.01.T01:CDS | 45.0% | |
| ATGTACCTCTTCTTGGTACC+CGG | + | Chr7:41880988-41881007 | MsG0780038191.01.T01:CDS | 45.0% | |
| CAAAGTAGGAACCGGATTCT+TGG | - | Chr7:41880730-41880749 | None:intergenic | 45.0% | |
| CAAGAATAAGCCTCGAGTGT+GGG | - | Chr7:41880414-41880433 | None:intergenic | 45.0% | |
| CAGACACGTATCTCATAGAG+GGG | - | Chr7:41881271-41881290 | None:intergenic | 45.0% | |
| CAGTGGAGGACTAGATACTA+TGG | + | Chr7:41881380-41881399 | MsG0780038191.01.T01:CDS | 45.0% | |
| CATGCTATTCACGATCGATC+CGG | + | Chr7:41880765-41880784 | MsG0780038191.01.T01:CDS | 45.0% | |
| CGAGGCTTATTCTTGCTTGA+TGG | + | Chr7:41880419-41880438 | MsG0780038191.01.T01:CDS | 45.0% | |
| GAAGTCTTTCCACGACAATC+CGG | + | Chr7:41880854-41880873 | MsG0780038191.01.T01:CDS | 45.0% | |
| GATACTCGGAAGTGAATCCT+CGG | - | Chr7:41880572-41880591 | None:intergenic | 45.0% | |
| GCAATAACCAATGGAGTAGG+AGG | - | Chr7:41880489-41880508 | None:intergenic | 45.0% | |
| GCAGACACGTATCTCATAGA+GGG | - | Chr7:41881272-41881291 | None:intergenic | 45.0% | |
| GCTTCTCATCCACATTAGTC+TGG | - | Chr7:41880320-41880339 | None:intergenic | 45.0% | |
| GGATTGTCGTGGAAAGACTT+CGG | - | Chr7:41880855-41880874 | None:intergenic | 45.0% | |
| GTATCGTGCATAGAAGTCAC+GGG | - | Chr7:41881555-41881574 | None:intergenic | 45.0% | |
| GTGGAGGACTAGATACTATG+GGG | + | Chr7:41881382-41881401 | MsG0780038191.01.T01:CDS | 45.0% | |
| GTGGGCATTAACTGAAAGTC+GGG | - | Chr7:41880396-41880415 | None:intergenic | 45.0% | |
| GTGTGTCTCTCCTTTATAGG+TGG | + | Chr7:41880814-41880833 | MsG0780038191.01.T01:CDS | 45.0% | |
| GTTTATCACCCACCGTGTAT+AGG | - | Chr7:41881222-41881241 | None:intergenic | 45.0% | |
| TAACGATGTCGGAAACCAGT+CGG | - | Chr7:41880276-41880295 | None:intergenic | 45.0% | |
| TCAGCTAGCAAAGTAGGAAC+CGG | - | Chr7:41880738-41880757 | None:intergenic | 45.0% | |
| TCCTGATACATCTCCTGAGT+AGG | - | Chr7:41881329-41881348 | None:intergenic | 45.0% | |
| TGAGAATCCTCCTACTCCAT+TGG | + | Chr7:41880479-41880498 | MsG0780038191.01.T01:CDS | 45.0% | |
| TGATACATCTCCTGAGTAGG+TGG | - | Chr7:41881326-41881345 | None:intergenic | 45.0% | |
| TGCAGACACGTATCTCATAG+AGG | - | Chr7:41881273-41881292 | None:intergenic | 45.0% | |
| TTGCTCATGAGGCCTATACA+CGG | + | Chr7:41881207-41881226 | MsG0780038191.01.T01:CDS | 45.0% | |
| ! | ACTGGTTTCCGACATCGTTA+CGG | + | Chr7:41880276-41880295 | MsG0780038191.01.T01:CDS | 45.0% |
| ! | ATAGATGAGGAGTGCAAGGA+TGG | - | Chr7:41880643-41880662 | None:intergenic | 45.0% |
| ! | TCTTATTCCTGTGGGAGCAT+TGG | - | Chr7:41881117-41881136 | None:intergenic | 45.0% |
| !! | GTATCAGGAGCATCTAGCTA+TGG | + | Chr7:41881340-41881359 | MsG0780038191.01.T01:CDS | 45.0% |
| !! | TACTCCAGCTTCTAGAGTCA+AGG | + | Chr7:41880935-41880954 | MsG0780038191.01.T01:CDS | 45.0% |
| !! | TTCAAGAGTGTCCTGACAAG+TGG | - | Chr7:41880619-41880638 | None:intergenic | 45.0% |
| AATGTATCCTCGACCCTTGC+CGG | - | Chr7:41880787-41880806 | None:intergenic | 50.0% | |
| ACCAATTCTCCGGATTGTCG+TGG | - | Chr7:41880866-41880885 | None:intergenic | 50.0% | |
| AGGATTCTCAAGTCCTGCGA+AGG | - | Chr7:41880469-41880488 | None:intergenic | 50.0% | |
| ATTCACGATCGATCCGGCAA+GGG | + | Chr7:41880771-41880790 | MsG0780038191.01.T01:CDS | 50.0% | |
| CACTATTCCAATGCTCCCAC+AGG | + | Chr7:41881107-41881126 | MsG0780038191.01.T01:CDS | 50.0% | |
| CAGCTATGAGTCTGAGTCTG+AGG | + | Chr7:41881577-41881596 | MsG0780038191.01.T01:CDS | 50.0% | |
| CGGGAAACCAAATTGTCGCA+AGG | - | Chr7:41881042-41881061 | None:intergenic | 50.0% | |
| CTCAAGATTGAGGATCCGAC+TGG | + | Chr7:41880258-41880277 | MsG0780038191.01.T01:CDS | 50.0% | |
| CTGGTTTCCGACATCGTTAC+GGG | + | Chr7:41880277-41880296 | MsG0780038191.01.T01:CDS | 50.0% | |
| GCAAGAATAAGCCTCGAGTG+TGG | - | Chr7:41880415-41880434 | None:intergenic | 50.0% | |
| GCATACCAATCTCCTCAGCT+TGG | - | Chr7:41881244-41881263 | None:intergenic | 50.0% | |
| GCATCTAGCTATGGAGAGTC+GGG | + | Chr7:41881349-41881368 | MsG0780038191.01.T01:CDS | 50.0% | |
| GGATGAGCAGAAGACTCATG+AGG | + | Chr7:41881436-41881455 | MsG0780038191.01.T01:CDS | 50.0% | |
| GGATTCTCAAGTCCTGCGAA+GGG | - | Chr7:41880468-41880487 | None:intergenic | 50.0% | |
| GGGTGGCATCAACTATAACC+CGG | + | Chr7:41881010-41881029 | MsG0780038191.01.T01:CDS | 50.0% | |
| GTAAAGCCCCGTAACGATGT+CGG | - | Chr7:41880287-41880306 | None:intergenic | 50.0% | |
| GTAGGTGGTAGTAGAGGCAA+AGG | - | Chr7:41881311-41881330 | None:intergenic | 50.0% | |
| GTGGGTGATAAACCAAGCTG+AGG | + | Chr7:41881229-41881248 | MsG0780038191.01.T01:CDS | 50.0% | |
| TAGGAACCGGATTCTTGGAG+TGG | - | Chr7:41880725-41880744 | None:intergenic | 50.0% | |
| TATTCACGATCGATCCGGCA+AGG | + | Chr7:41880770-41880789 | MsG0780038191.01.T01:CDS | 50.0% | |
| TCACCTCAAGACCACTTGTC+AGG | + | Chr7:41880605-41880624 | MsG0780038191.01.T01:CDS | 50.0% | |
| TCAGTTAATGCCCACACTCG+AGG | + | Chr7:41880401-41880420 | MsG0780038191.01.T01:CDS | 50.0% | |
| TCATGAGGCCTATACACGGT+GGG | + | Chr7:41881211-41881230 | MsG0780038191.01.T01:CDS | 50.0% | |
| TCCACGACAATCCGGAGAAT+TGG | + | Chr7:41880862-41880881 | MsG0780038191.01.T01:CDS | 50.0% | |
| TCCTGAGTAGGTGGTAGTAG+AGG | - | Chr7:41881317-41881336 | None:intergenic | 50.0% | |
| TGGTAGTAGAGGCAAAGGCA+TGG | - | Chr7:41881306-41881325 | None:intergenic | 50.0% | |
| TGGTTTCCGACATCGTTACG+GGG | + | Chr7:41880278-41880297 | MsG0780038191.01.T01:CDS | 50.0% | |
| TGTACCTCTTCTTGGTACCC+GGG | + | Chr7:41880989-41881008 | MsG0780038191.01.T01:CDS | 50.0% | |
| TGTCGTGGAAAGACTTCGGA+AGG | - | Chr7:41880851-41880870 | None:intergenic | 50.0% | |
| ! | AGAGACTCTAAGAGGGCTAG+AGG | + | Chr7:41881527-41881546 | MsG0780038191.01.T01:CDS | 50.0% |
| ! | AGTAGAGGCAAAGGCATGGT+AGG | - | Chr7:41881302-41881321 | None:intergenic | 50.0% |
| ! | GGTTATAGTTGATGCCACCC+CGG | - | Chr7:41881010-41881029 | None:intergenic | 50.0% |
| ! | GTTATAGTTGATGCCACCCC+GGG | - | Chr7:41881009-41881028 | None:intergenic | 50.0% |
| ! | TGTCCTGACAAGTGGTCTTG+AGG | - | Chr7:41880611-41880630 | None:intergenic | 50.0% |
| !! | CTGTGGGAGCATTGGAATAG+TGG | - | Chr7:41881109-41881128 | None:intergenic | 50.0% |
| AATTGTCGCAAGGCGAGCTC+CGG | - | Chr7:41881032-41881051 | None:intergenic | 55.0% | |
| CTCATGAGGCCTATACACGG+TGG | + | Chr7:41881210-41881229 | MsG0780038191.01.T01:CDS | 55.0% | |
| GAGCTCGCCTTGCGACAATT+TGG | + | Chr7:41881032-41881051 | MsG0780038191.01.T01:CDS | 55.0% | |
| GCCTCTACTACCACCTACTC+AGG | + | Chr7:41881313-41881332 | MsG0780038191.01.T01:CDS | 55.0% | |
| GTACCTCTTCTTGGTACCCG+GGG | + | Chr7:41880990-41881009 | MsG0780038191.01.T01:CDS | 55.0% | |
| ! | GGCCATAGATGAGGAGTGCA+AGG | - | Chr7:41880647-41880666 | None:intergenic | 55.0% |
| !! | AGAGTCGGGAGAAGCATCAG+TGG | + | Chr7:41881363-41881382 | MsG0780038191.01.T01:CDS | 55.0% |
| ATTGTCGCAAGGCGAGCTCC+GGG | - | Chr7:41881031-41881050 | None:intergenic | 60.0% | |
| GTCACTAAGGCTCGCATCCG+AGG | + | Chr7:41880552-41880571 | MsG0780038191.01.T01:CDS | 60.0% | |
| !! | GTCGGGAGAAGCATCAGTGG+AGG | + | Chr7:41881366-41881385 | MsG0780038191.01.T01:CDS | 60.0% |
| CCACCCCGGGTACCAAGAAG+AGG | - | Chr7:41880996-41881015 | None:intergenic | 65.0% | |
| CCTCTTCTTGGTACCCGGGG+TGG | + | Chr7:41880993-41881012 | MsG0780038191.01.T01:CDS | 65.0% | |
| GATCGATCCGGCAAGGGTCG+AGG | + | Chr7:41880777-41880796 | MsG0780038191.01.T01:CDS | 65.0% | |
| !! | GCTAAGGGGGTACCCTTCGC+AGG | + | Chr7:41880453-41880472 | MsG0780038191.01.T01:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 41880195 | 41881625 | 41880195 | ID=MsG0780038191.01;Name=MsG0780038191.01 |
| Chr7 | mRNA | 41880195 | 41881625 | 41880195 | ID=MsG0780038191.01.T01;Parent=MsG0780038191.01;Name=MsG0780038191.01.T01;_AED=0.48;_eAED=0.49;_QI=0|-1|0|1|-1|1|1|0|476 |
| Chr7 | exon | 41880195 | 41881625 | 41880195 | ID=MsG0780038191.01.T01:exon:15594;Parent=MsG0780038191.01.T01 |
| Chr7 | CDS | 41880195 | 41881625 | 41880195 | ID=MsG0780038191.01.T01:cds;Parent=MsG0780038191.01.T01 |
| Gene Sequence |
| Protein sequence |
