AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780038696.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780038696.01.T01 MTR_7g060320 93.679 443 26 1 68 510 1 441 0.0 852
MsG0780038696.01.T01 MTR_7g060320 91.379 58 5 0 1 58 346 403 8.74e-27 113
MsG0780038696.01.T01 MTR_7g060310 74.390 492 75 6 68 523 1 477 0.0 713
MsG0780038696.01.T01 MTR_7g060310 90.323 62 6 0 1 62 369 430 2.29e-28 118
MsG0780038696.01.T01 MTR_7g060115 76.327 452 87 7 69 517 1 435 0.0 675
MsG0780038696.01.T01 MTR_7g060115 85.484 62 9 0 1 62 338 399 7.34e-27 113
MsG0780038696.01.T01 MTR_7g446270 72.258 465 106 7 69 512 1 463 0.0 644
MsG0780038696.01.T01 MTR_7g446270 77.586 58 13 0 1 58 366 423 2.99e-21 97.1
MsG0780038696.01.T01 MTR_7g060260 73.423 444 76 4 68 510 1 403 0.0 629
MsG0780038696.01.T01 MTR_7g060260 94.828 58 3 0 1 58 308 365 2.62e-28 117
MsG0780038696.01.T01 MTR_7g060840 69.499 459 97 6 69 522 1 421 0.0 610
MsG0780038696.01.T01 MTR_7g060840 82.759 58 10 0 1 58 314 371 1.18e-23 103
MsG0780038696.01.T01 MTR_7g059540 67.941 471 129 8 69 523 1 465 0.0 601
MsG0780038696.01.T01 MTR_7g059540 81.034 58 11 0 1 58 357 414 2.45e-24 106
MsG0780038696.01.T01 MTR_7g059810 70.022 447 110 7 68 513 1 424 0.0 600
MsG0780038696.01.T01 MTR_7g059810 79.310 58 11 1 1 58 327 383 7.87e-21 95.5
MsG0780038696.01.T01 MTR_7g059540 68.615 462 133 8 68 523 1 456 0.0 595
MsG0780038696.01.T01 MTR_7g059540 81.034 58 11 0 1 58 348 405 2.72e-24 106
MsG0780038696.01.T01 MTR_7g060220 67.713 446 114 7 68 513 1 416 0.0 575
MsG0780038696.01.T01 MTR_7g060220 79.310 58 11 1 1 58 319 375 6.78e-21 95.9
MsG0780038696.01.T01 MTR_7g060370 65.639 454 140 6 68 511 1 448 0.0 575
MsG0780038696.01.T01 MTR_7g060370 72.308 65 16 2 1 65 353 415 1.08e-19 92.4
MsG0780038696.01.T01 MTR_7g060020 64.859 461 116 8 69 523 1 421 0.0 570
MsG0780038696.01.T01 MTR_7g060020 93.103 58 4 0 1 58 318 375 2.97e-28 117
MsG0780038696.01.T01 MTR_0182s0060 58.857 525 126 7 68 522 1 505 0.0 563
MsG0780038696.01.T01 MTR_0182s0060 79.310 58 11 1 1 58 399 455 3.53e-20 94.0
MsG0780038696.01.T01 MTR_7g060160 64.254 456 99 6 69 523 1 393 0.0 548
MsG0780038696.01.T01 MTR_7g060160 87.931 58 7 0 1 58 290 347 3.05e-26 111
MsG0780038696.01.T01 MTR_7g059510 60.171 467 118 7 69 523 1 411 0.0 519
MsG0780038696.01.T01 MTR_7g059510 81.356 59 11 0 1 59 307 365 9.70e-24 103
MsG0780038696.01.T01 MTR_7g060330 59.420 483 141 10 68 512 1 466 1.36e-178 511
MsG0780038696.01.T01 MTR_7g060330 82.759 58 10 0 1 58 370 427 3.46e-23 103
MsG0780038696.01.T01 MTR_7g059525 63.830 282 77 5 258 523 1 273 3.05e-114 340
MsG0780038696.01.T01 MTR_7g059525 82.759 58 10 0 1 58 165 222 6.96e-25 104
MsG0780038696.01.T01 MTR_7g059480 62.759 290 71 3 265 523 480 763 9.47e-104 328
MsG0780038696.01.T01 MTR_7g059480 70.000 230 62 4 69 296 1 225 4.80e-90 292
MsG0780038696.01.T01 MTR_7g059480 82.258 62 11 0 1 62 655 716 1.61e-24 108
MsG0780038696.01.T01 MTR_7g059515 83.871 186 26 2 69 253 1 183 1.91e-102 306
MsG0780038696.01.T01 MTR_7g059475 61.176 255 74 5 139 380 2 244 6.62e-96 291
MsG0780038696.01.T01 MTR_8g037923 37.120 493 243 11 65 523 1 460 1.82e-94 295
MsG0780038696.01.T01 MTR_8g037923 58.621 58 24 0 1 58 339 396 1.51e-13 73.2
MsG0780038696.01.T01 MTR_8g042170 38.293 457 223 11 93 523 24 447 3.04e-91 287
MsG0780038696.01.T01 MTR_8g042170 63.793 58 21 0 1 58 326 383 1.41e-15 79.7
MsG0780038696.01.T01 MTR_7g060060 66.972 218 61 4 117 326 1 215 8.23e-89 272
MsG0780038696.01.T01 MTR_7g059520 73.653 167 43 1 354 520 1 166 2.45e-84 259
MsG0780038696.01.T01 MTR_7g059520 82.759 58 10 0 1 58 62 119 2.96e-26 105
MsG0780038696.01.T01 MTR_7g060080 69.714 175 53 0 349 523 7 181 2.61e-82 254
MsG0780038696.01.T01 MTR_7g060080 82.759 58 10 0 1 58 73 130 6.01e-25 102
MsG0780038696.01.T01 MTR_8g037920 37.071 437 202 12 116 523 7 399 1.93e-77 249
MsG0780038696.01.T01 MTR_8g037920 38.614 101 62 0 1 101 278 378 6.85e-14 73.9
MsG0780038696.01.T01 MTR_8g042400 37.360 356 176 7 185 523 9 334 1.18e-66 219
MsG0780038696.01.T01 MTR_8g042400 60.345 58 23 0 1 58 213 270 1.31e-14 75.5
MsG0780038696.01.T01 MTR_1g048070 50.000 206 75 8 68 269 1 182 1.00e-47 166
MsG0780038696.01.T01 MTR_7g060200 54.787 188 55 5 139 325 2 160 1.10e-43 154
MsG0780038696.01.T01 MTR_8g042070 36.170 235 115 4 306 510 11 240 2.09e-42 152
MsG0780038696.01.T01 MTR_8g042070 37.624 101 63 0 1 101 132 232 1.02e-14 74.7
MsG0780038696.01.T01 MTR_5g016570 26.981 467 276 14 73 514 81 507 2.55e-34 136
MsG0780038696.01.T01 MTR_8g042080 45.223 157 69 4 91 239 22 169 1.86e-33 125
MsG0780038696.01.T01 MTR_5g086340 28.774 424 238 12 109 519 46 418 1.16e-30 124
MsG0780038696.01.T01 MTR_8g005325 27.438 441 244 13 95 510 58 447 9.78e-28 116
MsG0780038696.01.T01 MTR_5g086260 39.205 176 101 3 346 520 125 295 9.81e-27 110
MsG0780038696.01.T01 MTR_8g005235 24.396 455 273 13 81 510 9 417 2.70e-24 105
MsG0780038696.01.T01 MTR_0209s0060 26.566 399 226 13 112 490 46 397 2.83e-23 102
MsG0780038696.01.T01 MTR_0209s0030 26.566 399 226 13 112 490 46 397 2.83e-23 102
MsG0780038696.01.T01 MTR_8g042090 46.729 107 44 1 402 495 2 108 2.46e-22 92.4
MsG0780038696.01.T01 MTR_8g042090 58.621 58 24 0 1 58 15 72 2.61e-16 75.1
MsG0780038696.01.T01 MTR_3g079390 24.289 457 283 16 83 523 30 439 3.77e-22 99.8
MsG0780038696.01.T01 MTR_8g005295 24.364 472 279 13 105 517 46 498 1.67e-21 98.2
MsG0780038696.01.T01 MTR_5g087580 33.803 213 124 6 308 518 2 199 5.95e-21 92.0
MsG0780038696.01.T01 MTR_8g006525 24.942 433 254 13 81 490 10 394 3.18e-20 93.6
MsG0780038696.01.T01 MTR_2g036320 24.070 457 276 15 80 522 54 453 7.86e-20 92.8
MsG0780038696.01.T01 MTR_8g042830 24.942 433 207 14 112 518 58 398 1.64e-19 91.3
MsG0780038696.01.T01 MTR_8g005285 25.106 470 264 15 105 517 46 484 2.31e-19 91.7
MsG0780038696.01.T01 MTR_7g060105 80.392 51 10 0 432 482 1 51 4.65e-19 85.5
MsG0780038696.01.T01 MTR_7g060105 75.556 45 11 0 18 62 1 45 3.72e-14 71.2
MsG0780038696.01.T01 MTR_2g041180 24.884 430 249 17 110 522 65 437 3.30e-18 87.8
MsG0780038696.01.T01 MTR_8g005225 23.319 476 299 18 74 523 18 453 5.55e-18 87.0
MsG0780038696.01.T01 MTR_6g009170 23.832 428 247 11 109 518 39 405 1.27e-17 85.5
MsG0780038696.01.T01 MTR_1g040690 25.172 437 222 19 95 495 29 396 2.41e-17 85.1
MsG0780038696.01.T01 MTR_6g011050 25.701 428 236 17 105 518 34 393 3.56e-16 80.9
MsG0780038696.01.T01 MTR_8g005265 29.825 171 103 3 358 512 262 431 3.66e-15 78.2
MsG0780038696.01.T01 MTR_2g036310 30.201 149 95 7 380 522 2 147 7.42e-13 67.0
MsG0780038696.01.T01 MTR_7g017620 31.013 158 102 4 371 523 375 530 1.80e-12 70.1
MsG0780038696.01.T01 MTR_4g009590 32.000 150 97 3 378 523 392 540 3.10e-11 66.2
MsG0780038696.01.T01 MTR_4g009620 29.444 180 120 5 346 523 364 538 9.79e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780038696.01.T01 AT3G50120 28.118 473 276 17 73 523 83 513 1.67e-35 139
MsG0780038696.01.T01 AT3G50180 27.044 477 258 16 73 523 158 570 2.70e-33 134
MsG0780038696.01.T01 AT3G50130 28.448 464 269 19 73 516 119 539 2.24e-32 131
MsG0780038696.01.T01 AT3G50170 27.311 476 274 16 73 523 93 521 2.87e-32 130
MsG0780038696.01.T01 AT3G50160 27.397 438 249 13 95 523 106 483 9.58e-30 122
MsG0780038696.01.T01 AT3G50140 28.238 471 274 18 74 523 94 521 1.29e-29 122
MsG0780038696.01.T01 AT5G22540 25.476 420 238 12 110 511 46 408 2.10e-27 115
MsG0780038696.01.T01 AT3G50150 25.727 447 267 14 95 523 92 491 5.34e-27 114
MsG0780038696.01.T01 AT4G31980 26.014 419 232 13 112 518 310 662 4.19e-25 110
MsG0780038696.01.T01 AT3G47200 26.744 430 254 17 110 523 61 445 4.60e-25 108
MsG0780038696.01.T01 AT3G47200 26.744 430 254 17 110 523 61 445 4.60e-25 108
MsG0780038696.01.T01 AT2G36430 23.058 412 254 11 112 512 62 421 1.54e-22 100
MsG0780038696.01.T01 AT5G11290 25.768 423 240 12 112 523 50 409 3.60e-22 99.4
MsG0780038696.01.T01 AT3G47250 25.522 431 261 16 110 523 76 463 1.66e-21 97.8
MsG0780038696.01.T01 AT3G47250 25.522 431 261 16 110 523 76 463 1.66e-21 97.8
MsG0780038696.01.T01 AT3G47250 25.522 431 261 16 110 523 76 463 1.66e-21 97.8
MsG0780038696.01.T01 AT3G50190 25.161 465 267 15 74 523 77 475 1.84e-21 97.8
MsG0780038696.01.T01 AT5G22550 25.113 442 277 16 109 523 58 472 7.65e-21 95.9
MsG0780038696.01.T01 AT3G44710 22.371 447 291 11 106 519 59 482 2.34e-20 94.7
MsG0780038696.01.T01 AT2G44930 25.652 460 251 18 95 523 86 485 2.25e-16 82.4
MsG0780038696.01.T01 AT2G28580 23.457 486 299 15 54 523 60 488 2.42e-16 82.4
MsG0780038696.01.T01 AT2G28580 23.457 486 299 15 54 523 74 502 2.87e-16 82.0
MsG0780038696.01.T01 AT2G28580 25.099 506 283 20 54 523 60 505 5.43e-16 81.3
MsG0780038696.01.T01 AT2G28580 25.099 506 283 20 54 523 74 519 5.47e-16 81.3
MsG0780038696.01.T01 AT2G28580 24.696 494 276 19 69 523 1 437 1.00e-15 80.1
MsG0780038696.01.T01 AT1G67150 30.244 205 134 5 322 523 194 392 3.90e-15 77.8
MsG0780038696.01.T01 AT1G67150 30.244 205 134 5 322 523 194 392 3.90e-15 77.8
MsG0780038696.01.T01 AT1G67150 30.244 205 134 5 322 523 198 396 4.61e-15 77.8
MsG0780038696.01.T01 AT1G67150 30.319 188 124 4 337 523 168 349 8.06e-15 76.6
MsG0780038696.01.T01 AT5G11290 24.627 402 229 12 133 523 2 340 8.48e-15 76.3
MsG0780038696.01.T01 AT1G65985 24.831 443 279 18 93 511 14 426 1.85e-14 76.3
MsG0780038696.01.T01 AT1G65985 24.831 443 279 18 93 511 14 426 1.85e-14 76.3
MsG0780038696.01.T01 AT3G02645 28.916 166 106 5 352 512 340 498 5.71e-12 68.6
MsG0780038696.01.T01 AT3G60470 25.652 230 160 5 299 523 301 524 1.74e-11 67.0
MsG0780038696.01.T01 AT3G47210 31.034 145 84 4 112 251 110 243 6.12e-11 65.1

Find 114 sgRNAs with CRISPR-Local

Find 291 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTATCTTTGGTCGTGAATTT+TGG 0.136721 7:-51446978 None:intergenic
TCTTGCACCCTTTGTATCTT+TGG 0.243979 7:-51446991 None:intergenic
GATGAACTGAAGAGTCATTT+TGG 0.253265 7:+51447201 MsG0780038696.01.T01:CDS
CTCAATTCCTTCACATCTTC+AGG 0.273996 7:-51448473 None:intergenic
CTCAGTACCTTCACATCTTC+AGG 0.311435 7:-51444597 None:intergenic
TTGTGCACTTCAATTCTCTA+AGG 0.315494 7:+51448883 MsG0780038696.01.T01:three_prime_UTR
CGCAGCAAGGAATGCAATAA+TGG 0.328608 7:-51448690 None:intergenic
GCTAGTAAGGTGGTTTGTTA+TGG 0.353548 7:+51448767 MsG0780038696.01.T01:three_prime_UTR
GTGAAGGAATTGAGATCAAA+AGG 0.357359 7:+51448482 MsG0780038696.01.T01:CDS
GCACCGTAATAATTGTCTTC+TGG 0.360287 7:+51448851 MsG0780038696.01.T01:three_prime_UTR
CCGTAGTCGTTCTCAAAATC+TGG 0.362451 7:-51448407 None:intergenic
GTTGACCCGGCTTGCTAGTA+AGG 0.365285 7:+51448754 MsG0780038696.01.T01:three_prime_UTR
CCGTAGTCGTTGTGAAAATC+TGG 0.373518 7:-51444531 None:intergenic
ACCAGGGCACATGAATATTA+AGG 0.386593 7:+51447353 MsG0780038696.01.T01:CDS
GAATATTAAGGTTGATCAAC+TGG 0.390109 7:+51447365 MsG0780038696.01.T01:CDS
GACACATCTCATATGCTATC+AGG 0.393941 7:-51448385 None:intergenic
GGAAAGTCTCATGAAGGCTT+TGG 0.395437 7:+51447246 MsG0780038696.01.T01:CDS
TTTATGAATTTGGGTTAAGT+TGG 0.398843 7:+51448922 MsG0780038696.01.T01:three_prime_UTR
CTGTTCGTTGCTGCATATCT+TGG 0.405337 7:+51447311 MsG0780038696.01.T01:CDS
GTGAAGGTACTGAGATCAAA+AGG 0.406085 7:+51444606 MsG0780038696.01.T01:CDS
CACTTACTTCAGTAATCCTT+GGG 0.409121 7:+51448667 MsG0780038696.01.T01:CDS
TTATCTGACTGTGACTCATC+TGG 0.421692 7:-51447522 None:intergenic
GTCAGATAAGGAGAAGGATA+TGG 0.431798 7:+51447536 MsG0780038696.01.T01:CDS
ACACTTACTTCAGTAATCCT+TGG 0.432942 7:+51448666 MsG0780038696.01.T01:CDS
GTGCCCTGGTTCATCAAGCT+TGG 0.441245 7:-51447340 None:intergenic
TAGTTTGGGATGCCATCATA+TGG 0.441464 7:-51446912 None:intergenic
TCTCATATGCTATCAGGTTA+AGG 0.442866 7:-51448379 None:intergenic
ACTTATGATATTGAAAAGTT+CGG 0.446976 7:-51444667 None:intergenic
TAGGAGAGAAGTACAAGCTT+AGG 0.447232 7:+51447106 MsG0780038696.01.T01:CDS
CCATGGATGCTGTTCGTGGA+TGG 0.449062 7:+51447288 MsG0780038696.01.T01:CDS
ATTTCCTCGACTGTCACCAT+TGG 0.449199 7:+51447493 MsG0780038696.01.T01:CDS
TTACCAGAAGACAATTATTA+CGG 0.449835 7:-51448854 None:intergenic
GACAACACAAATCTGAAGTT+AGG 0.450449 7:+51447087 MsG0780038696.01.T01:CDS
CAATATCATAAGTACTGACT+TGG 0.453322 7:+51444677 MsG0780038696.01.T01:CDS
CAATATCATAAGTACTGACT+TGG 0.453322 7:+51448553 MsG0780038696.01.T01:CDS
GTCTCTGACTGTGACTCATT+TGG 0.454138 7:-51447606 None:intergenic
AGGACCTATTGACACTAACT+TGG 0.462576 7:-51447055 None:intergenic
TTTCCTCGACTGTCACCATT+GGG 0.465506 7:+51447494 MsG0780038696.01.T01:CDS
GTGTCGTCCACAACGATCTC+AGG 0.471457 7:-51448341 None:intergenic
CTCTAACTTTCATTCAAACA+TGG 0.476905 7:+51448725 MsG0780038696.01.T01:exon
TCAACTGGTTCTTGTGATGA+TGG 0.477187 7:+51447380 MsG0780038696.01.T01:CDS
TCACCCAAGTTAGTGTCAAT+AGG 0.485135 7:+51447051 MsG0780038696.01.T01:CDS
GTAATAATTGTCTTCTGGTA+AGG 0.486014 7:+51448856 MsG0780038696.01.T01:three_prime_UTR
TCAGATTTGTGTTGTCATGA+TGG 0.486562 7:-51447080 None:intergenic
ATGCAAGACTTGGATAGCAC+TGG 0.494292 7:+51448637 MsG0780038696.01.T01:CDS
GACTGTGACTCATTTGGTAA+TGG 0.495269 7:-51447600 None:intergenic
ATGTCAAGATGATGTCATAT+AGG 0.497436 7:+51448210 MsG0780038696.01.T01:CDS
GATATGGTTCCAAAAGGAAA+AGG 0.499541 7:+51447552 MsG0780038696.01.T01:CDS
AACATGGTTTGCGGTTGACC+CGG 0.504426 7:+51448741 MsG0780038696.01.T01:three_prime_UTR
AATAGCTTGAGTACTTGATA+AGG 0.505382 7:-51447429 None:intergenic
TTTCATTCAAACATGGTTTG+CGG 0.509065 7:+51448732 MsG0780038696.01.T01:three_prime_UTR
TTAATTGGAAAGTCTCATGA+AGG 0.510333 7:+51447240 MsG0780038696.01.T01:CDS
GAGAGAAGTACAAGCTTAGG+TGG 0.514812 7:+51447109 MsG0780038696.01.T01:CDS
ACCTTAATATTCATGTGCCC+TGG 0.515664 7:-51447354 None:intergenic
AAAGCCAAGCTTGATGAACC+AGG 0.516001 7:+51447336 MsG0780038696.01.T01:CDS
ATCAAGTACTCAAGCTATTG+TGG 0.516252 7:+51447433 MsG0780038696.01.T01:CDS
TGAAGGAATTGAGATCAAAA+GGG 0.519868 7:+51448483 MsG0780038696.01.T01:CDS
GAGAAGGATATGGTTCCAAA+AGG 0.526181 7:+51447546 MsG0780038696.01.T01:CDS
CCATCCACGAACAGCATCCA+TGG 0.530034 7:-51447288 None:intergenic
ACAGACATAGATTTCTCTGC+AGG 0.532054 7:+51448293 MsG0780038696.01.T01:CDS
ACTCATCTGGTGTGGCCCAA+TGG 0.532492 7:-51447509 None:intergenic
AATATCTCTCAACCATATGA+TGG 0.534771 7:+51446900 MsG0780038696.01.T01:CDS
TTTGAATGAAAGTTAGAGCA+AGG 0.535139 7:-51448720 None:intergenic
AGATGAGTCACAGTCAGATA+AGG 0.537618 7:+51447524 MsG0780038696.01.T01:CDS
AACCACCTTACTAGCAAGCC+GGG 0.541718 7:-51448759 None:intergenic
ATACAAGATCTAAGAGCAGT+AGG 0.542239 7:+51448236 MsG0780038696.01.T01:CDS
ATGAAGCTAACAACAAGAAA+CGG 0.547253 7:+51448141 MsG0780038696.01.T01:CDS
GCCTTGAAGAAAAGCTGCCA+TGG 0.551345 7:+51447271 MsG0780038696.01.T01:CDS
TTCACGACCAAAGATACAAA+GGG 0.552352 7:+51446984 MsG0780038696.01.T01:CDS
CAACTTCCTCATCACTCCCA+AGG 0.554939 7:-51444644 None:intergenic
CAACTTCCTCATCACTCCCA+AGG 0.554939 7:-51448520 None:intergenic
GGTGCAATGCCAACACACAC+TGG 0.562256 7:-51448833 None:intergenic
ACTTATGATATTGAAAAGAT+CGG 0.563500 7:-51448543 None:intergenic
GACTTAAGTCAAGCGCGACA+CGG 0.565085 7:+51448264 MsG0780038696.01.T01:CDS
CCTCACTACATCTAATTCCA+AGG 0.567086 7:+51447665 MsG0780038696.01.T01:CDS
AAACCACCTTACTAGCAAGC+CGG 0.570853 7:-51448760 None:intergenic
AAAATAGGTCCAGTGTGTGT+TGG 0.571237 7:+51448824 MsG0780038696.01.T01:three_prime_UTR
GACCCGGCTTGCTAGTAAGG+TGG 0.574079 7:+51448757 MsG0780038696.01.T01:three_prime_UTR
GCAGAGAAATCTATGTCTGT+TGG 0.574571 7:-51448290 None:intergenic
AACTTCCTCATCACTCCCAA+GGG 0.581619 7:-51444643 None:intergenic
AACTTCCTCATCACTCCCAA+GGG 0.581619 7:-51448519 None:intergenic
GCTGCCATGGATGCTGTTCG+TGG 0.585096 7:+51447284 MsG0780038696.01.T01:CDS
TGCAAGACTTGGATAGCACT+GGG 0.590251 7:+51448638 MsG0780038696.01.T01:CDS
CATCATTTATGAGATACTCA+AGG 0.592561 7:-51448951 None:intergenic
CGACCATCCTGAAGATGTGA+AGG 0.592905 7:+51444590 MsG0780038696.01.T01:CDS
TGAAGGTACTGAGATCAAAA+GGG 0.595602 7:+51444607 MsG0780038696.01.T01:CDS
ATTCACGACCAAAGATACAA+AGG 0.596083 7:+51446983 MsG0780038696.01.T01:CDS
GTTCCAAAAGGAAAAGGAGA+AGG 0.596199 7:+51447558 MsG0780038696.01.T01:CDS
GAAGTACAAGCTTAGGTGGG+CGG 0.600712 7:+51447113 MsG0780038696.01.T01:CDS
TTTGTGTTGTCATGATGGAT+AGG 0.600865 7:-51447075 None:intergenic
TGACCGTCCTGAAGATGTGA+AGG 0.603479 7:+51448466 MsG0780038696.01.T01:CDS
GACTCTTCCTGAGATCGTTG+TGG 0.609718 7:+51448334 MsG0780038696.01.T01:CDS
ATCATTTATGAGATACTCAA+GGG 0.609762 7:-51448950 None:intergenic
GTCACAGTCAGATAAGGAGA+AGG 0.612896 7:+51447530 MsG0780038696.01.T01:CDS
GGACCTATTGACACTAACTT+GGG 0.613813 7:-51447054 None:intergenic
TTGAATGAAAGTTAGAGCAA+GGG 0.614444 7:-51448719 None:intergenic
ACATAGATTTCTCTGCAGGA+TGG 0.615322 7:+51448297 MsG0780038696.01.T01:CDS
ACTGTAATAAATGCAAGACT+TGG 0.618169 7:+51448627 MsG0780038696.01.T01:CDS
CAATTCCCTTGGGAGTGATG+AGG 0.618966 7:+51448514 MsG0780038696.01.T01:CDS
CAATTCCCTTGGGAGTGATG+AGG 0.623704 7:+51444638 MsG0780038696.01.T01:CDS
TGGCCCAATGGTGACAGTCG+AGG 0.627415 7:-51447497 None:intergenic
GCAAGGGCATAAACGCAGCA+AGG 0.631850 7:-51448703 None:intergenic
TGAAGATCAAGAAGATGAGT+CGG 0.636773 7:-51447630 None:intergenic
AAATGTCAAGAAGAATTCAA+AGG 0.637898 7:+51448184 MsG0780038696.01.T01:CDS
TGACTGTGACTCATCTGGTG+TGG 0.642386 7:-51447517 None:intergenic
AGGAATGCAATAATGGCCCA+AGG 0.648170 7:-51448683 None:intergenic
AGAGAAGTACAAGCTTAGGT+GGG 0.649064 7:+51447110 MsG0780038696.01.T01:CDS
ATTCCTTCACATCTTCAGGA+CGG 0.651604 7:-51448469 None:intergenic
GTACCTTCACATCTTCAGGA+TGG 0.667216 7:-51444593 None:intergenic
AAGCCAAGCTTGATGAACCA+GGG 0.673771 7:+51447337 MsG0780038696.01.T01:CDS
GATAAGCGAGTCCATGAAAG+CGG 0.684217 7:-51444568 None:intergenic
CCTTGGAATTAGATGTAGTG+AGG 0.704253 7:-51447665 None:intergenic
AAACACTCGACAAATTCCAG+AGG 0.722189 7:+51447149 MsG0780038696.01.T01:CDS
TTAAGTCAAGCGCGACACGG+AGG 0.726221 7:+51448267 MsG0780038696.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATGTGTATTATATAATA+TGG - Chr7:51446850-51446869 None:intergenic 10.0%
!! AAATGTGTATTATATAATAT+GGG - Chr7:51446849-51446868 None:intergenic 10.0%
!! TTAAATTATGTTACAAAAAT+AGG + Chr7:51448809-51448828 MsG0780038696.01.T01:three_prime_UTR 10.0%
!!! AAATTTTTCTTTAATAGTTT+GGG - Chr7:51446929-51446948 None:intergenic 10.0%
!!! TCAAAATATATTTTTGTATT+AGG - Chr7:51448581-51448600 None:intergenic 10.0%
!!! TGAATTTTTTTTATGAATTT+GGG + Chr7:51448913-51448932 MsG0780038696.01.T01:three_prime_UTR 10.0%
!!! TTGAATTTTTTTTATGAATT+TGG + Chr7:51448912-51448931 MsG0780038696.01.T01:three_prime_UTR 10.0%
!! AACTATTAAAGAAAAATTTG+TGG + Chr7:51446930-51446949 MsG0780038696.01.T01:CDS 15.0%
!! TATTAGGTTACTAAATTTAA+AGG + Chr7:51447761-51447780 MsG0780038696.01.T01:intron 15.0%
!! TCTAATTCTTAATACATATT+TGG - Chr7:51446174-51446193 None:intergenic 15.0%
!!! CAAATTTTTCTTTAATAGTT+TGG - Chr7:51446930-51446949 None:intergenic 15.0%
!! AAATATCAAAAGTCAAGAAA+AGG - Chr7:51447970-51447989 None:intergenic 20.0%
!! AAATGCGATCTAAATAAATA+TGG - Chr7:51445536-51445555 None:intergenic 20.0%
!! AATATCAAAAGTCAAGAAAA+GGG - Chr7:51447969-51447988 None:intergenic 20.0%
!! ACCATTATCATAATTACAAA+GGG + Chr7:51447851-51447870 MsG0780038696.01.T01:intron 20.0%
!! ACTTATGATATTGAAAAGAT+CGG - Chr7:51448546-51448565 None:intergenic 20.0%
!! ACTTATGATATTGAAAAGTT+CGG - Chr7:51444670-51444689 None:intergenic 20.0%
!! ATGTACATAATAGTAATTAG+AGG + Chr7:51447893-51447912 MsG0780038696.01.T01:intron 20.0%
!! TACAAACAAACAAAACTATT+AGG + Chr7:51447745-51447764 MsG0780038696.01.T01:intron 20.0%
!! TACCATTATCATAATTACAA+AGG + Chr7:51447850-51447869 MsG0780038696.01.T01:intron 20.0%
!! TTGTCAAACATAAATGTTAT+TGG - Chr7:51446090-51446109 None:intergenic 20.0%
!!! ACAGTAATGATTATGTATTT+TGG - Chr7:51444736-51444755 None:intergenic 20.0%
!!! ATTTTTGGAAAAAAAAACAC+AGG + Chr7:51446703-51446722 MsG0780038696.01.T01:intron 20.0%
!!! GCATTTTTGAAAATTTTACA+GGG - Chr7:51445953-51445972 None:intergenic 20.0%
!!! TAATACTCATTATTTTAAGC+AGG + Chr7:51446756-51446775 MsG0780038696.01.T01:intron 20.0%
!!! TGTTTTAATCAGAAATGAAT+TGG - Chr7:51448108-51448127 None:intergenic 20.0%
!!! TTGACTTTTGATATTTTTGA+GGG + Chr7:51447974-51447993 MsG0780038696.01.T01:intron 20.0%
!!! TTTGAATTTTTGGTTTAAGT+TGG + Chr7:51445037-51445056 MsG0780038696.01.T01:intron 20.0%
!!! TTTTTGGAAAAAAAAACACA+GGG + Chr7:51446704-51446723 MsG0780038696.01.T01:intron 20.0%
! AAATGTCAAGAAGAATTCAA+AGG + Chr7:51448184-51448203 MsG0780038696.01.T01:CDS 25.0%
! AATATTCTCATAGATGATCT+AGG + Chr7:51445176-51445195 MsG0780038696.01.T01:intron 25.0%
! AGTTTATTCTCAATAGATTC+AGG - Chr7:51445730-51445749 None:intergenic 25.0%
! ATAATAATTGTCTTCTGGTA+AGG + Chr7:51444982-51445001 MsG0780038696.01.T01:intron 25.0%
! ATACATATTTGGTATCATAG+TGG - Chr7:51446163-51446182 None:intergenic 25.0%
! ATCATTTATGAGATACTCAA+GGG - Chr7:51448953-51448972 None:intergenic 25.0%
! ATTTAGTTATCTTGTTCACT+AGG + Chr7:51446782-51446801 MsG0780038696.01.T01:intron 25.0%
! CATTAGTACCATGAAAAAAA+GGG + Chr7:51446006-51446025 MsG0780038696.01.T01:intron 25.0%
! CCATTATCATAATTACAAAG+GGG + Chr7:51447852-51447871 MsG0780038696.01.T01:intron 25.0%
! TAAGATTTCGTAACGAAAAT+AGG + Chr7:51444931-51444950 MsG0780038696.01.T01:intron 25.0%
! TAAGTGTGGTACATAAAAAA+TGG + Chr7:51445375-51445394 MsG0780038696.01.T01:intron 25.0%
! TTACCAGAAGACAATTATTA+CGG - Chr7:51444983-51445002 None:intergenic 25.0%
! TTACCAGAAGACAATTATTA+TGG - Chr7:51444983-51445002 None:intergenic 25.0%
!! TAGATGTTTAGTTTATTCTG+AGG + Chr7:51445759-51445778 MsG0780038696.01.T01:intron 25.0%
!! TGAATTGATAAAAAGCATGA+GGG + Chr7:51447470-51447489 MsG0780038696.01.T01:CDS 25.0%
!! TTTATGAATTTGGGTTAAGT+TGG + Chr7:51448922-51448941 MsG0780038696.01.T01:three_prime_UTR 25.0%
!!! AAGTATTGGTTACAAAATTC+CGG + Chr7:51445343-51445362 MsG0780038696.01.T01:intron 25.0%
!!! AATGAAGTTACGGATTTTTT+CGG - Chr7:51446622-51446641 None:intergenic 25.0%
!!! ACTTTTTTAAGCTCTACTAA+CGG - Chr7:51445427-51445446 None:intergenic 25.0%
!!! ATTATTGCTGATTTTTGACT+TGG - Chr7:51446413-51446432 None:intergenic 25.0%
!!! CTTGACTTTTGATATTTTTG+AGG + Chr7:51447973-51447992 MsG0780038696.01.T01:intron 25.0%
!!! GACGATGTTTTAACTTTAAT+TGG + Chr7:51447225-51447244 MsG0780038696.01.T01:CDS 25.0%
!!! GGCATTTTTGAAAATTTTAC+AGG - Chr7:51445954-51445973 None:intergenic 25.0%
!!! GGTGTTATTTTATCTTTTCT+AGG - Chr7:51447948-51447967 None:intergenic 25.0%
!!! TGACTTTTGATATTTTTGAG+GGG + Chr7:51447975-51447994 MsG0780038696.01.T01:intron 25.0%
!!! TGTGGTTTGTTTTGAATTTT+TGG + Chr7:51445027-51445046 MsG0780038696.01.T01:intron 25.0%
!!! TTGTTATTTCTATTGTACCT+TGG - Chr7:51447685-51447704 None:intergenic 25.0%
!!! TTTTTTCGGATTTTGTAATC+CGG - Chr7:51446608-51446627 None:intergenic 25.0%
AAATGTACCCAAGTAATTTG+TGG + Chr7:51446193-51446212 MsG0780038696.01.T01:intron 30.0%
AATAGCTTGAGTACTTGATA+AGG - Chr7:51447432-51447451 None:intergenic 30.0%
AATATCTCTCAACCATATGA+TGG + Chr7:51446900-51446919 MsG0780038696.01.T01:CDS 30.0%
AATCCGGAAACTTCAAAAAT+AGG - Chr7:51446592-51446611 None:intergenic 30.0%
ACATTTGCCACAAATTACTT+GGG - Chr7:51446203-51446222 None:intergenic 30.0%
ACTGTAATAAATGCAAGACT+TGG + Chr7:51448627-51448646 MsG0780038696.01.T01:CDS 30.0%
ACTGTAATAGATGCAATACA+TGG + Chr7:51444751-51444770 MsG0780038696.01.T01:intron 30.0%
ATCCGGAAACTTCAAAAATA+GGG - Chr7:51446591-51446610 None:intergenic 30.0%
ATGAAGCTAACAACAAGAAA+CGG + Chr7:51448141-51448160 MsG0780038696.01.T01:CDS 30.0%
ATGTCAAGATGATGTCATAT+AGG + Chr7:51448210-51448229 MsG0780038696.01.T01:CDS 30.0%
ATGTCTGAATGAAAGTAACA+GGG - Chr7:51444846-51444865 None:intergenic 30.0%
CAAAACAATCAACTACATAC+AGG - Chr7:51445605-51445624 None:intergenic 30.0%
CAATGGACAAGAAAAGTAAA+AGG - Chr7:51445823-51445842 None:intergenic 30.0%
CAGAAGACAATTATTATGGT+CGG - Chr7:51444979-51444998 None:intergenic 30.0%
CATCATTTATGAGATACTCA+AGG - Chr7:51448954-51448973 None:intergenic 30.0%
CATGGTAAAACACAAAGTAT+TGG + Chr7:51445329-51445348 MsG0780038696.01.T01:intron 30.0%
CCCCTTTGTAATTATGATAA+TGG - Chr7:51447855-51447874 None:intergenic 30.0%
CTCTAACTTTCATTCAAACA+TGG + Chr7:51448725-51448744 MsG0780038696.01.T01:exon 30.0%
GAAAAAAAGGGTCTAAATGA+TGG + Chr7:51446018-51446037 MsG0780038696.01.T01:intron 30.0%
GCATTAGTACCATGAAAAAA+AGG + Chr7:51446005-51446024 MsG0780038696.01.T01:intron 30.0%
GTAATAATTGTCTTCTGGTA+AGG + Chr7:51448856-51448875 MsG0780038696.01.T01:three_prime_UTR 30.0%
GTTACAAACATGTTCAGAAT+TGG + Chr7:51446457-51446476 MsG0780038696.01.T01:intron 30.0%
TAGGGTGAAAAATGAAGTTA+CGG - Chr7:51446632-51446651 None:intergenic 30.0%
TGAAGGAATTGAGATCAAAA+GGG + Chr7:51448483-51448502 MsG0780038696.01.T01:CDS 30.0%
TTAATTGGAAAGTCTCATGA+AGG + Chr7:51447240-51447259 MsG0780038696.01.T01:CDS 30.0%
TTATCATAATTACAAAGGGG+AGG + Chr7:51447855-51447874 MsG0780038696.01.T01:intron 30.0%
TTATCTTGTTCACTAGGTAA+AGG + Chr7:51446788-51446807 MsG0780038696.01.T01:intron 30.0%
TTGAATGAAAGTTAGAGCAA+GGG - Chr7:51448722-51448741 None:intergenic 30.0%
TTTCATTCAAACATGGTTTG+CGG + Chr7:51448732-51448751 MsG0780038696.01.T01:three_prime_UTR 30.0%
TTTGAATGAAAGTTAGAGCA+AGG - Chr7:51448723-51448742 None:intergenic 30.0%
! AATTAGTTGTCTTGTTGAGT+AGG + Chr7:51445448-51445467 MsG0780038696.01.T01:intron 30.0%
! ACATTTTCGTCAAGTTTGAA+AGG + Chr7:51446875-51446894 MsG0780038696.01.T01:intron 30.0%
! ACTTGTCTTATTAGCTCATT+TGG - Chr7:51445288-51445307 None:intergenic 30.0%
! AGGTATATTCTCTCAAGTTT+TGG - Chr7:51446252-51446271 None:intergenic 30.0%
! CATTTTTCACCCTATAACAA+AGG + Chr7:51446638-51446657 MsG0780038696.01.T01:intron 30.0%
! CCAAAATATGTTTCTGTGTT+AGG - Chr7:51444705-51444724 None:intergenic 30.0%
! CCTAACACAGAAACATATTT+TGG + Chr7:51444702-51444721 MsG0780038696.01.T01:intron 30.0%
! CTATAGAGTATTACTAGACA+TGG + Chr7:51445311-51445330 MsG0780038696.01.T01:intron 30.0%
! GAATATTAAGGTTGATCAAC+TGG + Chr7:51447365-51447384 MsG0780038696.01.T01:CDS 30.0%
! GATGGAATTTTAGACTTTGA+GGG + Chr7:51446036-51446055 MsG0780038696.01.T01:intron 30.0%
! GTGAATTGATAAAAAGCATG+AGG + Chr7:51447469-51447488 MsG0780038696.01.T01:CDS 30.0%
! TATCTTTGGTCGTGAATTTT+GGG - Chr7:51446980-51446999 None:intergenic 30.0%
! TGATGGAATTTTAGACTTTG+AGG + Chr7:51446035-51446054 MsG0780038696.01.T01:intron 30.0%
! TGTATTTCTAAGAACTTCTG+TGG + Chr7:51449032-51449051 MsG0780038696.01.T01:three_prime_UTR 30.0%
!! AAAGTGATGGACATATGAAA+AGG + Chr7:51445846-51445865 MsG0780038696.01.T01:intron 30.0%
!! ATGGTGTTTTCCTTTGTTAT+AGG - Chr7:51446651-51446670 None:intergenic 30.0%
!! CAATATCATAAGTACTGACT+TGG + Chr7:51444677-51444696 MsG0780038696.01.T01:CDS 30.0%
!! GACTTTTGATATTTTTGAGG+GGG + Chr7:51447976-51447995 MsG0780038696.01.T01:intron 30.0%
!! TGGTGTTTTCCTTTGTTATA+GGG - Chr7:51446650-51446669 None:intergenic 30.0%
!!! CATTTAGACCCTTTTTTTCA+TGG - Chr7:51446017-51446036 None:intergenic 30.0%
AAAATAGAGTCCAAATGCTG+AGG - Chr7:51446272-51446291 None:intergenic 35.0%
AATGAATGCAATAATGCCCA+AGG - Chr7:51444810-51444829 None:intergenic 35.0%
ACACTTACTTCAGTAATCCT+TGG + Chr7:51448666-51448685 MsG0780038696.01.T01:CDS 35.0%
ACAGACAGCACAAAGAAAAA+AGG - Chr7:51448981-51449000 None:intergenic 35.0%
AGAGAATATACCTCAGCATT+TGG + Chr7:51446259-51446278 MsG0780038696.01.T01:intron 35.0%
ATACAAGATCTAAGAGCAGT+AGG + Chr7:51448236-51448255 MsG0780038696.01.T01:CDS 35.0%
ATCAAGTACTCAAGCTATTG+TGG + Chr7:51447433-51447452 MsG0780038696.01.T01:CDS 35.0%
ATGTCCATCACTTTACTCAA+TGG - Chr7:51445840-51445859 None:intergenic 35.0%
ATTAGCACCATGCAAAGAAA+AGG + Chr7:51446515-51446534 MsG0780038696.01.T01:intron 35.0%
ATTCACGACCAAAGATACAA+AGG + Chr7:51446983-51447002 MsG0780038696.01.T01:CDS 35.0%
CACTTACTTCAGTAATCCTT+GGG + Chr7:51448667-51448686 MsG0780038696.01.T01:CDS 35.0%
CATGTCTGAATGAAAGTAAC+AGG - Chr7:51444847-51444866 None:intergenic 35.0%
CCATTCCAGATTATGAAATC+CGG + Chr7:51446667-51446686 MsG0780038696.01.T01:intron 35.0%
CGACCATAATAATTGTCTTC+TGG + Chr7:51444977-51444996 MsG0780038696.01.T01:intron 35.0%
CTAATAAAGGTGGTTCGTTA+TGG + Chr7:51444888-51444907 MsG0780038696.01.T01:intron 35.0%
GACATTTGCCACAAATTACT+TGG - Chr7:51446204-51446223 None:intergenic 35.0%
GATATGGTTCCAAAAGGAAA+AGG + Chr7:51447552-51447571 MsG0780038696.01.T01:CDS 35.0%
GTGAAGGAATTGAGATCAAA+AGG + Chr7:51448482-51448501 MsG0780038696.01.T01:CDS 35.0%
TCAAACACACAACACAGAAA+AGG - Chr7:51445112-51445131 None:intergenic 35.0%
TCAGATTTGTGTTGTCATGA+TGG - Chr7:51447083-51447102 None:intergenic 35.0%
TCATAGTCAAGACTCAAGAA+GGG - Chr7:51445068-51445087 None:intergenic 35.0%
TCTCATATGCTATCAGGTTA+AGG - Chr7:51448382-51448401 None:intergenic 35.0%
TGAAGATCAAGAAGATGAGT+CGG - Chr7:51447633-51447652 None:intergenic 35.0%
TTAGCACCATGCAAAGAAAA+GGG + Chr7:51446516-51446535 MsG0780038696.01.T01:intron 35.0%
TTCACGACCAAAGATACAAA+GGG + Chr7:51446984-51447003 MsG0780038696.01.T01:CDS 35.0%
TTCATGGTACTAATGCAATC+CGG - Chr7:51446001-51446020 None:intergenic 35.0%
TTGTCCATTGAGTAAAGTGA+TGG + Chr7:51445833-51445852 MsG0780038696.01.T01:intron 35.0%
TTGTGCACTTCAATTCTCTA+AGG + Chr7:51448883-51448902 MsG0780038696.01.T01:three_prime_UTR 35.0%
TTTAGCAGTTCATGTACTCT+TGG + Chr7:51445693-51445712 MsG0780038696.01.T01:intron 35.0%
! AAAAATGCCCTTTTGCATTC+CGG + Chr7:51445965-51445984 MsG0780038696.01.T01:intron 35.0%
! ATCTTTGGTCGTGAATTTTG+GGG - Chr7:51446979-51446998 None:intergenic 35.0%
! ATCTTTTTGTGTAGATCCTC+TGG - Chr7:51447168-51447187 None:intergenic 35.0%
! GACAACACAAATCTGAAGTT+AGG + Chr7:51447087-51447106 MsG0780038696.01.T01:CDS 35.0%
! GATGAACTGAAGAGTCATTT+TGG + Chr7:51447201-51447220 MsG0780038696.01.T01:CDS 35.0%
! GGATTTTACTCAATTCCCTT+GGG + Chr7:51444628-51444647 MsG0780038696.01.T01:CDS 35.0%
! GGTTTTCGGATTATGTAATC+CGG + Chr7:51446548-51446567 MsG0780038696.01.T01:intron 35.0%
! GTATCTTTGGTCGTGAATTT+TGG - Chr7:51446981-51447000 None:intergenic 35.0%
! TAAACACCCTTTTCTTTGCA+TGG - Chr7:51446525-51446544 None:intergenic 35.0%
! TTGTTCTTTTGCAGCTTTCA+TGG + Chr7:51448433-51448452 MsG0780038696.01.T01:CDS 35.0%
! TTTTTCCAAAAATGCCCTTG+AGG - Chr7:51446696-51446715 None:intergenic 35.0%
!! CAAAGAAAAGGGTGTTTATG+CGG + Chr7:51446527-51446546 MsG0780038696.01.T01:intron 35.0%
!! CTGTTACTTTCATTCAGACA+TGG + Chr7:51444845-51444864 MsG0780038696.01.T01:intron 35.0%
!! TGAAGGTACTGAGATCAAAA+GGG + Chr7:51444607-51444626 MsG0780038696.01.T01:CDS 35.0%
!! TTTGTGTTGTCATGATGGAT+AGG - Chr7:51447078-51447097 None:intergenic 35.0%
!!! TTGCTGATTTTTGACTTGGA+AGG - Chr7:51446409-51446428 None:intergenic 35.0%
AAAAATGCCCTTGAGGTTTC+CGG - Chr7:51446689-51446708 None:intergenic 40.0%
AAAATAGGTCCAGTGTGTGT+TGG + Chr7:51448824-51448843 MsG0780038696.01.T01:three_prime_UTR 40.0%
AAACACTCGACAAATTCCAG+AGG + Chr7:51447149-51447168 MsG0780038696.01.T01:CDS 40.0%
AACATGTTCAGAATTGGTGC+TGG + Chr7:51446463-51446482 MsG0780038696.01.T01:intron 40.0%
AACCACCTTTATTAGCAAGC+CGG - Chr7:51444883-51444902 None:intergenic 40.0%
AAGCTCTACTAACGGAATGA+TGG - Chr7:51445419-51445438 None:intergenic 40.0%
ACACTTACTTCAGCAATCCT+TGG + Chr7:51444790-51444809 MsG0780038696.01.T01:intron 40.0%
ACAGACATAGATTTCTCTGC+AGG + Chr7:51448293-51448312 MsG0780038696.01.T01:CDS 40.0%
ACATAGATTTCTCTGCAGGA+TGG + Chr7:51448297-51448316 MsG0780038696.01.T01:CDS 40.0%
ACCAGGGCACATGAATATTA+AGG + Chr7:51447353-51447372 MsG0780038696.01.T01:CDS 40.0%
ACCTTAATATTCATGTGCCC+TGG - Chr7:51447357-51447376 None:intergenic 40.0%
ACGTAATCCGGAATGCAAAA+GGG - Chr7:51445975-51445994 None:intergenic 40.0%
AGATGAGTCACAGTCAGATA+AGG + Chr7:51447524-51447543 MsG0780038696.01.T01:CDS 40.0%
AGGACCTATTGACACTAACT+TGG - Chr7:51447058-51447077 None:intergenic 40.0%
ATGAAATCCGGAAACCTCAA+GGG + Chr7:51446679-51446698 MsG0780038696.01.T01:intron 40.0%
ATGCAATACATGGATAGCAG+AGG + Chr7:51444761-51444780 MsG0780038696.01.T01:intron 40.0%
ATTCCTTCACATCTTCAGGA+CGG - Chr7:51448472-51448491 None:intergenic 40.0%
CACTTACTTCAGCAATCCTT+GGG + Chr7:51444791-51444810 MsG0780038696.01.T01:intron 40.0%
CCGGATTTCATAATCTGGAA+TGG - Chr7:51446670-51446689 None:intergenic 40.0%
CCTCACTACATCTAATTCCA+AGG + Chr7:51447665-51447684 MsG0780038696.01.T01:CDS 40.0%
CCTTGGAATTAGATGTAGTG+AGG - Chr7:51447668-51447687 None:intergenic 40.0%
CTCAATTCCTTCACATCTTC+AGG - Chr7:51448476-51448495 None:intergenic 40.0%
CTCATAGTCAAGACTCAAGA+AGG - Chr7:51445069-51445088 None:intergenic 40.0%
GACAAAAAGTCCCTTCTTAC+TGG - Chr7:51446068-51446087 None:intergenic 40.0%
GACACATCTCATATGCTATC+AGG - Chr7:51448388-51448407 None:intergenic 40.0%
GACTGTGACTCATTTGGTAA+TGG - Chr7:51447603-51447622 None:intergenic 40.0%
GAGAAGGATATGGTTCCAAA+AGG + Chr7:51447546-51447565 MsG0780038696.01.T01:CDS 40.0%
GATGGACATATGAAAAGGAC+AGG + Chr7:51445851-51445870 MsG0780038696.01.T01:intron 40.0%
GCAATCCAGATTACGTAATC+CGG - Chr7:51446495-51446514 None:intergenic 40.0%
GCACCGTAATAATTGTCTTC+TGG + Chr7:51448851-51448870 MsG0780038696.01.T01:three_prime_UTR 40.0%
GCAGAGAAATCTATGTCTGT+TGG - Chr7:51448293-51448312 None:intergenic 40.0%
GGACCTATTGACACTAACTT+GGG - Chr7:51447057-51447076 None:intergenic 40.0%
GGTTTCCGGATTTCATAATC+TGG - Chr7:51446675-51446694 None:intergenic 40.0%
GTCAGATAAGGAGAAGGATA+TGG + Chr7:51447536-51447555 MsG0780038696.01.T01:CDS 40.0%
GTTCCAAAAGGAAAAGGAGA+AGG + Chr7:51447558-51447577 MsG0780038696.01.T01:CDS 40.0%
TACGTAATCCGGAATGCAAA+AGG - Chr7:51445976-51445995 None:intergenic 40.0%
TAGGTAAAGGTTTGAGAGCA+TGG + Chr7:51446801-51446820 MsG0780038696.01.T01:intron 40.0%
TAGTGTACTTCACTTCTCTG+TGG + Chr7:51445009-51445028 MsG0780038696.01.T01:intron 40.0%
TATGAAATCCGGAAACCTCA+AGG + Chr7:51446678-51446697 MsG0780038696.01.T01:intron 40.0%
TCACCCAAGTTAGTGTCAAT+AGG + Chr7:51447051-51447070 MsG0780038696.01.T01:CDS 40.0%
TCTGAATGAAAGTAACAGGG+CGG - Chr7:51444843-51444862 None:intergenic 40.0%
TCTTGCACCCTTTGTATCTT+TGG - Chr7:51446994-51447013 None:intergenic 40.0%
TGCAATACATGGATAGCAGA+GGG + Chr7:51444762-51444781 MsG0780038696.01.T01:intron 40.0%
TTATCTGACTGTGACTCATC+TGG - Chr7:51447525-51447544 None:intergenic 40.0%
! AGAGAAGTACAAGCTTAGGT+GGG + Chr7:51447110-51447129 MsG0780038696.01.T01:CDS 40.0%
! CAGATTTTCACAACGACTAC+GGG + Chr7:51444532-51444551 MsG0780038696.01.T01:CDS 40.0%
! CCAGATTTTCACAACGACTA+CGG + Chr7:51444531-51444550 MsG0780038696.01.T01:CDS 40.0%
! GAAGGTGGTACTTTTGGTAT+TGG - Chr7:51446391-51446410 None:intergenic 40.0%
! GGGATTTTACTCAATTCCCT+TGG + Chr7:51444627-51444646 MsG0780038696.01.T01:CDS 40.0%
! TAGGAGAGAAGTACAAGCTT+AGG + Chr7:51447106-51447125 MsG0780038696.01.T01:CDS 40.0%
! TAGTTTGGGATGCCATCATA+TGG - Chr7:51446915-51446934 None:intergenic 40.0%
! TCAACTGGTTCTTGTGATGA+TGG + Chr7:51447380-51447399 MsG0780038696.01.T01:CDS 40.0%
! TCTCCTTCTCCTTTTCCTTT+TGG - Chr7:51447564-51447583 None:intergenic 40.0%
!! CCAGATTTTGAGAACGACTA+CGG + Chr7:51448407-51448426 MsG0780038696.01.T01:CDS 40.0%
!! GCTAGTAAGGTGGTTTGTTA+TGG + Chr7:51448767-51448786 MsG0780038696.01.T01:three_prime_UTR 40.0%
!! GGAATTTTAGACTTTGAGGG+CGG + Chr7:51446039-51446058 MsG0780038696.01.T01:intron 40.0%
!! GTGAAGGTACTGAGATCAAA+AGG + Chr7:51444606-51444625 MsG0780038696.01.T01:CDS 40.0%
!! TTAACCCGGCTTGCTAATAA+AGG + Chr7:51444875-51444894 MsG0780038696.01.T01:intron 40.0%
!!! AAGGGTGTTTATGCGGTTTT+CGG + Chr7:51446534-51446553 MsG0780038696.01.T01:intron 40.0%
!!! CGCCCTATTTTTGAAGTTTC+CGG + Chr7:51446586-51446605 MsG0780038696.01.T01:intron 40.0%
!!! CTGATTTTTGACTTGGAAGG+TGG - Chr7:51446406-51446425 None:intergenic 40.0%
!!! TTGTTCTTTTGCCGCTTTCA+TGG + Chr7:51444557-51444576 MsG0780038696.01.T01:CDS 40.0%
AAACCACCTTACTAGCAAGC+CGG - Chr7:51448763-51448782 None:intergenic 45.0%
AAAGCCAAGCTTGATGAACC+AGG + Chr7:51447336-51447355 MsG0780038696.01.T01:CDS 45.0%
AACTTCCTCATCACTCCCAA+GGG - Chr7:51444646-51444665 None:intergenic 45.0%
AAGCCAAGCTTGATGAACCA+GGG + Chr7:51447337-51447356 MsG0780038696.01.T01:CDS 45.0%
ACCACACTTAGCTGTTGTTC+CGG - Chr7:51445365-51445384 None:intergenic 45.0%
ACCACCTTTATTAGCAAGCC+GGG - Chr7:51444882-51444901 None:intergenic 45.0%
AGAGGAGTGAGGATTGTGAT+TGG - Chr7:51446340-51446359 None:intergenic 45.0%
AGGAATGCAATAATGGCCCA+AGG - Chr7:51448686-51448705 None:intergenic 45.0%
ATGCAAGACTTGGATAGCAC+TGG + Chr7:51448637-51448656 MsG0780038696.01.T01:CDS 45.0%
ATTTCCTCGACTGTCACCAT+TGG + Chr7:51447493-51447512 MsG0780038696.01.T01:CDS 45.0%
CCGTAGTCGTTCTCAAAATC+TGG - Chr7:51448410-51448429 None:intergenic 45.0%
CCGTAGTCGTTGTGAAAATC+TGG - Chr7:51444534-51444553 None:intergenic 45.0%
CGCAGCAAGGAATGCAATAA+TGG - Chr7:51448693-51448712 None:intergenic 45.0%
CTCAGTACCTTCACATCTTC+AGG - Chr7:51444600-51444619 None:intergenic 45.0%
CTGTTCGTTGCTGCATATCT+TGG + Chr7:51447311-51447330 MsG0780038696.01.T01:CDS 45.0%
GAGGATTGTGATTGGTGCAA+GGG - Chr7:51446332-51446351 None:intergenic 45.0%
GATAAGCGAGTCCATGAAAG+CGG - Chr7:51444571-51444590 None:intergenic 45.0%
GCAATCCGGATTACGTAATC+CGG - Chr7:51445987-51446006 None:intergenic 45.0%
GCACGAGAATCTTATAGGGT+GGG + Chr7:51446728-51446747 MsG0780038696.01.T01:intron 45.0%
GCATTCCGGATTACGTAATC+CGG + Chr7:51445979-51445998 MsG0780038696.01.T01:intron 45.0%
GCATTCCGGATTACGTAATC+TGG + Chr7:51445979-51445998 MsG0780038696.01.T01:intron 45.0%
GGAAAGTCTCATGAAGGCTT+TGG + Chr7:51447246-51447265 MsG0780038696.01.T01:CDS 45.0%
GGAATGATGGCACTAACTGT+CGG - Chr7:51445406-51445425 None:intergenic 45.0%
GTACCTTCACATCTTCAGGA+TGG - Chr7:51444596-51444615 None:intergenic 45.0%
GTCACAGTCAGATAAGGAGA+AGG + Chr7:51447530-51447549 MsG0780038696.01.T01:CDS 45.0%
GTCTCTGACTGTGACTCATT+TGG - Chr7:51447609-51447628 None:intergenic 45.0%
TGAGGATTGTGATTGGTGCA+AGG - Chr7:51446333-51446352 None:intergenic 45.0%
TGCAAGACTTGGATAGCACT+GGG + Chr7:51448638-51448657 MsG0780038696.01.T01:CDS 45.0%
TGTTAGCAAAGAGAGGAGTG+AGG - Chr7:51446351-51446370 None:intergenic 45.0%
TTTCCTCGACTGTCACCATT+GGG + Chr7:51447494-51447513 MsG0780038696.01.T01:CDS 45.0%
! GACATGGTTTGCGATTAACC+CGG + Chr7:51444861-51444880 MsG0780038696.01.T01:intron 45.0%
! GACTTGGAAGGTGGTACTTT+TGG - Chr7:51446397-51446416 None:intergenic 45.0%
! GAGAGAAGTACAAGCTTAGG+TGG + Chr7:51447109-51447128 MsG0780038696.01.T01:CDS 45.0%
! GCTAGAGTGTTAGCAAAGAG+AGG - Chr7:51446358-51446377 None:intergenic 45.0%
! TCCATGGCAGCTTTTCTTCA+AGG - Chr7:51447275-51447294 None:intergenic 45.0%
! TTGCCTTGCTACTTCTGACA+AGG - Chr7:51445508-51445527 None:intergenic 45.0%
!!! GGAAACCTCAAGGGCATTTT+TGG + Chr7:51446688-51446707 MsG0780038696.01.T01:intron 45.0%
AACCACCTTACTAGCAAGCC+GGG - Chr7:51448762-51448781 None:intergenic 50.0%
AAGGGGAGGACAGTAATCAG+AGG + Chr7:51447869-51447888 MsG0780038696.01.T01:intron 50.0%
AGGGCGCACGAGAATCTTAT+AGG + Chr7:51446723-51446742 MsG0780038696.01.T01:intron 50.0%
AGGGGAGGACAGTAATCAGA+GGG + Chr7:51447870-51447889 MsG0780038696.01.T01:intron 50.0%
CAACTTCCTCATCACTCCCA+AGG - Chr7:51444647-51444666 None:intergenic 50.0%
CAATTCCCTTGGGAGTGATG+AGG + Chr7:51444638-51444657 MsG0780038696.01.T01:CDS 50.0%
CCTCCTTGTCAGAAGTAGCA+AGG + Chr7:51445502-51445521 MsG0780038696.01.T01:intron 50.0%
CGACCATCCTGAAGATGTGA+AGG + Chr7:51444590-51444609 MsG0780038696.01.T01:CDS 50.0%
CGCACGAGAATCTTATAGGG+TGG + Chr7:51446727-51446746 MsG0780038696.01.T01:intron 50.0%
GAAGTACAAGCTTAGGTGGG+CGG + Chr7:51447113-51447132 MsG0780038696.01.T01:CDS 50.0%
GACTCTTCCTGAGATCGTTG+TGG + Chr7:51448334-51448353 MsG0780038696.01.T01:CDS 50.0%
GACTTAAGTCAAGCGCGACA+CGG + Chr7:51448264-51448283 MsG0780038696.01.T01:CDS 50.0%
GCCTTGAAGAAAAGCTGCCA+TGG + Chr7:51447271-51447290 MsG0780038696.01.T01:CDS 50.0%
GGGCGCACGAGAATCTTATA+GGG + Chr7:51446724-51446743 MsG0780038696.01.T01:intron 50.0%
TCCGGAACAACAGCTAAGTG+TGG + Chr7:51445361-51445380 MsG0780038696.01.T01:intron 50.0%
TGACCGTCCTGAAGATGTGA+AGG + Chr7:51448466-51448485 MsG0780038696.01.T01:CDS 50.0%
TGACTGTGACTCATCTGGTG+TGG - Chr7:51447520-51447539 None:intergenic 50.0%
TGGTGCAAGGGACTTGAAGA+AGG - Chr7:51446320-51446339 None:intergenic 50.0%
! AACATGGTTTGCGGTTGACC+CGG + Chr7:51448741-51448760 MsG0780038696.01.T01:three_prime_UTR 50.0%
! CCTTGCTACTTCTGACAAGG+AGG - Chr7:51445505-51445524 None:intergenic 50.0%
!! ACCCGGCTTGCTAATAAAGG+TGG + Chr7:51444878-51444897 MsG0780038696.01.T01:intron 50.0%
!! GAATTGGTGCTGGTGCATTC+CGG + Chr7:51446473-51446492 MsG0780038696.01.T01:intron 50.0%
ACTCATCTGGTGTGGCCCAA+TGG - Chr7:51447512-51447531 None:intergenic 55.0%
AGGGCGGAGTCCAGTAAGAA+GGG + Chr7:51446055-51446074 MsG0780038696.01.T01:intron 55.0%
CCATCCACGAACAGCATCCA+TGG - Chr7:51447291-51447310 None:intergenic 55.0%
CCATGGATGCTGTTCGTGGA+TGG + Chr7:51447288-51447307 MsG0780038696.01.T01:CDS 55.0%
GGCGCGTCACATGATGTTTC+CGG - Chr7:51446570-51446589 None:intergenic 55.0%
GGTGCAATGCCAACACACAC+TGG - Chr7:51448836-51448855 None:intergenic 55.0%
GTGCCCTGGTTCATCAAGCT+TGG - Chr7:51447343-51447362 None:intergenic 55.0%
GTGTCGTCCACAACGATCTC+AGG - Chr7:51448344-51448363 None:intergenic 55.0%
TTAAGTCAAGCGCGACACGG+AGG + Chr7:51448267-51448286 MsG0780038696.01.T01:CDS 55.0%
! GCAAGGGCATAAACGCAGCA+AGG - Chr7:51448706-51448725 None:intergenic 55.0%
!! GTTGACCCGGCTTGCTAGTA+AGG + Chr7:51448754-51448773 MsG0780038696.01.T01:three_prime_UTR 55.0%
AGGGCGCGCGAGAAGTCAAT+AGG - Chr7:51445934-51445953 None:intergenic 60.0%
CGCGCGAGAAGTCAATAGGG+TGG - Chr7:51445930-51445949 None:intergenic 60.0%
GAGGGCGGAGTCCAGTAAGA+AGG + Chr7:51446054-51446073 MsG0780038696.01.T01:intron 60.0%
GCTGCCATGGATGCTGTTCG+TGG + Chr7:51447284-51447303 MsG0780038696.01.T01:CDS 60.0%
GGGCGCGCGAGAAGTCAATA+GGG - Chr7:51445933-51445952 None:intergenic 60.0%
TGGCCCAATGGTGACAGTCG+AGG - Chr7:51447500-51447519 None:intergenic 60.0%
!! GACCCGGCTTGCTAGTAAGG+TGG + Chr7:51448757-51448776 MsG0780038696.01.T01:three_prime_UTR 60.0%
Chromosome Type Strat End Strand Name
Chr7 gene 51444525 51449052 51444525 ID=MsG0780038696.01;Name=MsG0780038696.01
Chr7 mRNA 51444525 51449052 51444525 ID=MsG0780038696.01.T01;Parent=MsG0780038696.01;Name=MsG0780038696.01.T01;_AED=0.39;_eAED=0.39;_QI=0|0.5|0.33|1|1|1|3|322|523
Chr7 exon 51444525 51444698 51444525 ID=MsG0780038696.01.T01:exon:9357;Parent=MsG0780038696.01.T01
Chr7 exon 51446889 51447686 51446889 ID=MsG0780038696.01.T01:exon:9358;Parent=MsG0780038696.01.T01
Chr7 exon 51448131 51449052 51448131 ID=MsG0780038696.01.T01:exon:9359;Parent=MsG0780038696.01.T01
Chr7 CDS 51444525 51444698 51444525 ID=MsG0780038696.01.T01:cds;Parent=MsG0780038696.01.T01
Chr7 CDS 51446889 51447686 51446889 ID=MsG0780038696.01.T01:cds;Parent=MsG0780038696.01.T01
Chr7 CDS 51448131 51448730 51448131 ID=MsG0780038696.01.T01:cds;Parent=MsG0780038696.01.T01
Chr7 three_prime_UTR 51448731 51449052 51448731 ID=MsG0780038696.01.T01:three_prime_utr;Parent=MsG0780038696.01.T01
Gene Sequence

>MsG0780038696.01.T01

ATGTGTCCAGATTTTCACAACGACTACGGGATTTGTTCTTTTGCCGCTTTCATGGACTCGCTTATCGACCATCCTGAAGATGTGAAGGTACTGAGATCAAAAGGGATTTTACTCAATTCCCTTGGGAGTGATGAGGAAGTTGCCGAACTTTTCAATATCATAAGTACTGACTTGTTTGAAAGGTCAATATCTCTCAACCATATGATGGCATCCCAAACTATTAAAGAAAAATTTGTGGAGTTACAAAAATCAAAGCAAACACCCCAAAATTCACGACCAAAGATACAAAGGGTGCAAGAGTATCTCAGAAATAGAAAAAACTTTGAGAAGCACTACTCACCCAAGTTAGTGTCAATAGGTCCTATCCATCATGACAACACAAATCTGAAGTTAGGAGAGAAGTACAAGCTTAGGTGGGCGGCGAAATACATAGAAAACACTCGACAAATTCCAGAGGATCTACACAAAAAGATTGCAGATAACATTGATGAACTGAAGAGTCATTTTGGCGACGATGTTTTAACTTTAATTGGAAAGTCTCATGAAGGCTTTGGAAGCCTTGAAGAAAAGCTGCCATGGATGCTGTTCGTGGATGGCTGTTCGTTGCTGCATATCTTGGAGAAAGCCAAGCTTGATGAACCAGGGCACATGAATATTAAGGTTGATCAACTGGTTCTTGTGATGATGGATGTGCTTTTGTTAGAGAATCAACTTCCTTATCAAGTACTCAAGCTATTGTGGAAAGATAGCGAGAGTGAATTGATAAAAAGCATGAGGGATTTCCTCGACTGTCACCATTGGGCCACACCAGATGAGTCACAGTCAGATAAGGAGAAGGATATGGTTCCAAAAGGAAAAGGAGAAGGAGAACATAGTGTATCAATACCATTACCAAATGAGTCACAGTCAGAGACACCGACTCATCTTCTTGATCTTCAGCGCAAAATCATCCTCACTACATCTAATTCCAAGACTAAAAGCAATGAAGCTAACAACAAGAAACGGAGTCAGAAGAATTTAGATGAAAATGTCAAGAAGAATTCAAAGGAAGATGTCAAGATGATGTCATATAGGAGCATACAAGATCTAAGAGCAGTAGGAATAAGACTTAAGTCAAGCGCGACACGGAGGCCAACAGACATAGATTTCTCTGCAGGATGGTTCGCTGCGAAACTGACTCTTCCTGAGATCGTTGTGGACGACACTTCAGCTGCTACTTTCCTTAACCTGATAGCATATGAGATGTGTCCAGATTTTGAGAACGACTACGGAATTTGTTCTTTTGCAGCTTTCATGGACTCACTCATTGACCGTCCTGAAGATGTGAAGGAATTGAGATCAAAAGGGATTTTGCTCAATTCCCTTGGGAGTGATGAGGAAGTTGCCGATCTTTTCAATATCATAAGTACTGACTTGGTACCTAATACAAAAATATATTTTGAAGTCAGAGAAAAAATACATGAGCATTACTGTAATAAATGCAAGACTTGGATAGCACTGGGTTTTCACACTTACTTCAGTAATCCTTGGGCCATTATTGCATTCCTTGCTGCGTTTATGCCCTTGCTCTAA
Protein sequence

>MsG0780038696.01.T01

MCPDFHNDYGICSFAAFMDSLIDHPEDVKVLRSKGILLNSLGSDEEVAELFNIISTDLFERSISLNHMMASQTIKEKFVELQKSKQTPQNSRPKIQRVQEYLRNRKNFEKHYSPKLVSIGPIHHDNTNLKLGEKYKLRWAAKYIENTRQIPEDLHKKIADNIDELKSHFGDDVLTLIGKSHEGFGSLEEKLPWMLFVDGCSLLHILEKAKLDEPGHMNIKVDQLVLVMMDVLLLENQLPYQVLKLLWKDSESELIKSMRDFLDCHHWATPDESQSDKEKDMVPKGKGEGEHSVSIPLPNESQSETPTHLLDLQRKIILTTSNSKTKSNEANNKKRSQKNLDENVKKNSKEDVKMMSYRSIQDLRAVGIRLKSSATRRPTDIDFSAGWFAAKLTLPEIVVDDTSAATFLNLIAYEMCPDFENDYGICSFAAFMDSLIDRPEDVKELRSKGILLNSLGSDEEVADLFNIISTDLVPNTKIYFEVREKIHEHYCNKCKTWIALGFHTYFSNPWAIIAFLAAFMPLL*