AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780039898.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780039898.01.T01 MTR_7g081210 91.169 770 59 5 1 766 1 765 0.0 1268
MsG0780039898.01.T01 MTR_8g007390 63.736 728 223 13 40 751 67 769 0.0 791
MsG0780039898.01.T01 MTR_8g007390 63.649 729 223 13 40 751 67 770 0.0 790
MsG0780039898.01.T01 MTR_8g076100 50.362 276 136 1 188 462 408 683 3.43e-88 298
MsG0780039898.01.T01 MTR_8g076100 50.362 276 136 1 188 462 408 683 3.53e-88 298
MsG0780039898.01.T01 MTR_8g076100 50.362 276 136 1 188 462 408 683 6.11e-88 299
MsG0780039898.01.T01 MTR_7g104800 27.778 234 161 5 199 431 102 328 1.64e-21 99.0
MsG0780039898.01.T01 MTR_7g118120 24.583 240 171 6 199 434 105 338 8.13e-21 97.1
MsG0780039898.01.T01 MTR_4g052940 24.684 316 203 6 126 435 58 344 1.07e-15 81.3
MsG0780039898.01.T01 MTR_4g052940 25.484 310 208 4 126 435 58 344 1.48e-13 73.2
MsG0780039898.01.T01 MTR_7g010360 23.151 311 208 6 121 431 301 580 2.04e-12 71.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780039898.01.T01 AT2G44710 52.632 703 280 13 70 743 12 690 0.0 567
MsG0780039898.01.T01 AT2G44710 48.148 540 235 8 1 511 1 524 1.66e-130 408
MsG0780039898.01.T01 AT2G44710 48.148 540 235 8 1 511 1 524 1.66e-130 408
MsG0780039898.01.T01 AT2G44710 60.331 121 46 2 373 491 25 145 4.95e-33 133
MsG0780039898.01.T01 AT4G00830 25.161 310 205 8 134 434 58 349 1.31e-22 102
MsG0780039898.01.T01 AT4G00830 25.161 310 205 8 134 434 58 349 1.31e-22 102
MsG0780039898.01.T01 AT4G00830 25.161 310 205 8 134 434 58 349 1.31e-22 102
MsG0780039898.01.T01 AT4G00830 24.839 310 206 8 134 434 58 349 1.77e-21 99.4
MsG0780039898.01.T01 AT4G00830 25.161 310 197 8 134 434 58 341 2.51e-20 95.5
MsG0780039898.01.T01 AT4G00830 25.161 310 197 8 134 434 58 341 2.51e-20 95.5
MsG0780039898.01.T01 AT3G52660 28.634 227 157 4 199 423 93 316 5.43e-20 94.4
MsG0780039898.01.T01 AT3G52660 28.634 227 157 4 199 423 93 316 5.43e-20 94.4
MsG0780039898.01.T01 AT3G52660 28.634 227 157 4 199 423 93 316 5.43e-20 94.4

Find 239 sgRNAs with CRISPR-Local

Find 410 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGACTACAATTTCAGATTAA+TGG 0.152218 7:-70244069 MsG0780039898.01.T01:intron
CGAGCTCTTCTTAAGAAATA+TGG 0.216036 7:-70242726 MsG0780039898.01.T01:CDS
CATGATTATCTTCATGATTC+TGG 0.219945 7:+70245629 None:intergenic
AGTAGAGTTTCTACAGATTA+TGG 0.227585 7:-70242031 MsG0780039898.01.T01:CDS
GAAAATAAGGTCCATGGATT+TGG 0.230006 7:-70240610 MsG0780039898.01.T01:three_prime_UTR
AAGGAGAAATTGAAACATTA+TGG 0.254237 7:-70243839 MsG0780039898.01.T01:CDS
TGTCTTCTGCAATCGCTTAT+AGG 0.267797 7:+70243709 None:intergenic
CACCATAAGCCTCTCTATAT+CGG 0.288642 7:+70241591 None:intergenic
CGCGATTATGACACATTATC+TGG 0.300448 7:-70241818 MsG0780039898.01.T01:CDS
TGCTGAGTTATAGACTGATT+TGG 0.315723 7:-70240809 MsG0780039898.01.T01:three_prime_UTR
AGCTCCTGGCTCTGTTCATT+TGG 0.317727 7:-70240636 MsG0780039898.01.T01:three_prime_UTR
GGCTCTCTTGGTGGTAGTGA+TGG 0.318163 7:-70241284 MsG0780039898.01.T01:CDS
TGACCTGGGTGATGATATTA+TGG 0.320374 7:-70243630 MsG0780039898.01.T01:CDS
CGTTGAATCCTCAGACTAAA+AGG 0.324292 7:-70244238 MsG0780039898.01.T01:CDS
TCGTCATCCACATTCTCTTC+AGG 0.324779 7:+70244557 None:intergenic
GTTCATTTGGAAAGAAAATA+AGG 0.328933 7:-70240623 MsG0780039898.01.T01:three_prime_UTR
TTCTGGATAGGTTCAGGTTC+AGG 0.331908 7:+70245646 None:intergenic
GCTCTCTTGGTGGTAGTGAT+GGG 0.337411 7:-70241283 MsG0780039898.01.T01:CDS
GCTTCTTTCAGGCAAAAGTT+AGG 0.339127 7:-70242488 MsG0780039898.01.T01:intron
TCTGTAGAAACTCTACTTCT+TGG 0.355207 7:+70242037 None:intergenic
CATTTGCAAGACATGGAAAA+AGG 0.359691 7:-70243992 MsG0780039898.01.T01:CDS
GCTCTGTAGCATCCTTGTTT+AGG 0.359842 7:+70244315 None:intergenic
TGCACCAAGGAGGGGTCATC+TGG 0.364168 7:-70241915 MsG0780039898.01.T01:CDS
CTTACAGGCATCGACGTAAC+AGG 0.366599 7:+70242252 None:intergenic
GAGGCTGGCCTAGCTCTTAC+AGG 0.370811 7:+70242237 None:intergenic
AGTAGCACGAAGAGAGATTA+TGG 0.371286 7:-70242082 MsG0780039898.01.T01:CDS
TCTCGTTTAGACTATGACTA+TGG 0.372013 7:-70241626 MsG0780039898.01.T01:CDS
TCAGGAGGTCGAAGGGGAAG+TGG 0.372615 7:-70244588 MsG0780039898.01.T01:CDS
AATTATGGATTTGTTACGTT+TGG 0.373518 7:-70242651 MsG0780039898.01.T01:CDS
TCATGATTCTGGATAGGTTC+AGG 0.375138 7:+70245640 None:intergenic
CTCTCACTAGAAGGTCTAAC+TGG 0.376141 7:+70242285 None:intergenic
ATCATCACCCAGGTCAATAA+AGG 0.378170 7:+70243637 None:intergenic
GGTGCTCGCAGGAAGAATTA+TGG 0.380990 7:-70242666 MsG0780039898.01.T01:CDS
TAGCCGCAAGATTGGAAGAT+TGG 0.381965 7:-70242403 MsG0780039898.01.T01:CDS
GACATTTCTAGCCGCAAGAT+TGG 0.387515 7:-70242411 MsG0780039898.01.T01:CDS
AAGGAATTGGAAGTATTTGT+TGG 0.389201 7:-70244341 MsG0780039898.01.T01:CDS
TGCAAACTCCTTTATTGACC+TGG 0.389228 7:-70243645 MsG0780039898.01.T01:CDS
ATTCGTCCATGTATTCTAGT+AGG 0.390078 7:-70241101 MsG0780039898.01.T01:CDS
GACGTATCCCTATGCAGGTC+AGG 0.397751 7:+70241944 None:intergenic
AACACAAAAGCAGAAGGAAT+TGG 0.400361 7:-70244354 MsG0780039898.01.T01:CDS
AGACAATGTAGAGGAGGTTA+AGG 0.405956 7:-70244732 MsG0780039898.01.T01:CDS
TCTTCAAAATGACGGGCATC+AGG 0.414427 7:+70240841 None:intergenic
CGTCTATTTCTCTCACTAGA+AGG 0.416231 7:+70242276 None:intergenic
AGGAATTGGAAGTATTTGTT+GGG 0.417287 7:-70244340 MsG0780039898.01.T01:CDS
TTGAAGTTATTCAATTTATG+AGG 0.418486 7:-70240725 MsG0780039898.01.T01:three_prime_UTR
GAGCTCTTCTTAAGAAATAT+GGG 0.418982 7:-70242725 MsG0780039898.01.T01:CDS
TGTTGTGTGTCAGGCTCTCT+TGG 0.420335 7:-70241296 MsG0780039898.01.T01:intron
AGAGAAGATCGAGGATATCT+TGG 0.425786 7:+70240756 None:intergenic
GGAACAAGTTGAAGTTAGAA+AGG 0.430302 7:-70244378 MsG0780039898.01.T01:CDS
CTTTCCAAATGAACAGAGCC+AGG 0.433942 7:+70240632 None:intergenic
GATGTTGATGGTGATGTTGC+TGG 0.435202 7:-70244461 MsG0780039898.01.T01:CDS
ACATGTTTACCACGAACTTT+CGG 0.441103 7:+70242444 None:intergenic
TTCTACAGATTATGGCTCTC+AGG 0.441928 7:-70242023 MsG0780039898.01.T01:CDS
CTGCTGGTGGTTTAGGTTGG+TGG 0.442382 7:-70241132 MsG0780039898.01.T01:intron
TCCACCATAGCTACACCATT+AGG 0.442384 7:+70245565 None:intergenic
TATATGAGTGGCAGCGGTGG+TGG 0.443030 7:-70241057 MsG0780039898.01.T01:CDS
CTTCTTTCAGGCAAAAGTTA+GGG 0.447493 7:-70242487 MsG0780039898.01.T01:intron
GATCTAGTTGGAGGAGAGGC+TGG 0.450659 7:+70242222 None:intergenic
GGAGAACGTGCATGAGCATC+TGG 0.454735 7:-70244417 MsG0780039898.01.T01:CDS
GATTATCCAGCCCGTGACTC+TGG 0.465141 7:-70241971 MsG0780039898.01.T01:CDS
GCTCATGTGTTCAGAAGACT+TGG 0.466194 7:-70242321 MsG0780039898.01.T01:CDS
TTCGTCCATGTATTCTAGTA+GGG 0.474534 7:-70241100 MsG0780039898.01.T01:CDS
CTCTCTTGGTGGTAGTGATG+GGG 0.474594 7:-70241282 MsG0780039898.01.T01:CDS
TTGAAGTAATCCTTGATTAG+TGG 0.475159 7:+70240780 None:intergenic
AGTCTAAACGAGATCTTGAT+TGG 0.475930 7:+70241636 None:intergenic
TTATGGAGTTGAAAGTTTCA+AGG 0.477289 7:-70243822 MsG0780039898.01.T01:CDS
GTTAGGCGAAGGCAACAAAA+AGG 0.477845 7:-70242580 MsG0780039898.01.T01:intron
TCCCGATATAGAGAGGCTTA+TGG 0.477978 7:-70241593 MsG0780039898.01.T01:CDS
CTCATGCACGTTCTCCTCAC+TGG 0.478824 7:+70244424 None:intergenic
ACCATAAGCCTCTCTATATC+GGG 0.480367 7:+70241592 None:intergenic
AATTGAACAAGACGAGGGTC+AGG 0.483233 7:-70244606 MsG0780039898.01.T01:CDS
CCAAACCATGCCTCCGAAAG+TGG 0.484060 7:-70245740 None:intergenic
TTTCACCACTTTCGGAGGCA+TGG 0.484199 7:+70245735 None:intergenic
CTTAGACGGGGAGGTGGAGA+AGG 0.484673 7:+70241860 None:intergenic
TAATTCTTCCTGCGAGCACC+TGG 0.485879 7:+70242669 None:intergenic
AGATAATGTGTCATAATCGC+GGG 0.487594 7:+70241820 None:intergenic
ATAGAGAGGCTTATGGTGAT+AGG 0.489079 7:-70241586 MsG0780039898.01.T01:intron
TCAGCTGAAACAGTACCTAA+TGG 0.489415 7:-70245580 MsG0780039898.01.T01:CDS
TTGCTGTTGATTCTGAGTTG+TGG 0.490523 7:+70245672 None:intergenic
GACTATGACTATGGAGGCAG+TGG 0.491996 7:-70241617 MsG0780039898.01.T01:CDS
GGCATCTACTCATCAAGTTA+TGG 0.493108 7:-70241260 MsG0780039898.01.T01:CDS
CGATAACTTAGACGGGGAGG+TGG 0.500123 7:+70241854 None:intergenic
GCAGGTCGACTCTGTGGTGC+AGG 0.502241 7:+70242342 None:intergenic
CTTGGAGGTGGCAGATCCAC+AGG 0.502795 7:+70242055 None:intergenic
ATGTGGTATCACCACATGTC+AGG 0.506024 7:-70244040 MsG0780039898.01.T01:CDS
AGTCGACAGGAACCGAGTTA+TGG 0.506806 7:-70241401 MsG0780039898.01.T01:CDS
TTCGTCTCGTTCAGATGCTA+AGG 0.507456 7:-70243735 MsG0780039898.01.T01:CDS
CTGGCTACCCTGACCTGCAT+AGG 0.509292 7:-70241952 MsG0780039898.01.T01:CDS
CTGAGGATTCAACGTCGTCC+TGG 0.509458 7:+70244247 None:intergenic
AGACCTCTTCCGAAAGTTCG+TGG 0.513973 7:-70242453 MsG0780039898.01.T01:CDS
GTCAGGGTAGCCAGAGTCAC+GGG 0.514833 7:+70241961 None:intergenic
TGTAACAGGCTGGCTGCTGT+TGG 0.515451 7:-70240890 MsG0780039898.01.T01:intron
CATACCCCTACTAGAATACA+TGG 0.515458 7:+70241095 None:intergenic
ACGAGGGTCAGGAGGTCGAA+GGG 0.519013 7:-70244595 MsG0780039898.01.T01:CDS
GCTGAGAGCATTACCAGTGC+AGG 0.519052 7:-70242603 MsG0780039898.01.T01:CDS
TTACCACGAACTTTCGGAAG+AGG 0.521044 7:+70242450 None:intergenic
GATGACGAAGAGGGTGATAC+AGG 0.521079 7:-70244542 MsG0780039898.01.T01:CDS
AGATCTAGTCTAGGATATAG+TGG 0.521744 7:-70241470 MsG0780039898.01.T01:CDS
GCAGGTCGACTACGTGGTGC+AGG 0.522305 7:+70242360 None:intergenic
TGGAAAGAAAATAAGGTCCA+TGG 0.522332 7:-70240616 MsG0780039898.01.T01:three_prime_UTR
AGATCCTACAGGAGATTAGC+AGG 0.522628 7:-70242204 MsG0780039898.01.T01:intron
GGATCTAGATCTTATTATTG+AGG 0.523521 7:-70241036 MsG0780039898.01.T01:intron
GCTGGATAATCTCTATAAGA+TGG 0.523576 7:+70241983 None:intergenic
GCAAACTCCTTTATTGACCT+GGG 0.528469 7:-70243644 MsG0780039898.01.T01:CDS
GTAGAAACTCTACTTCTTGG+AGG 0.530039 7:+70242040 None:intergenic
TCCTTCGCGATAACTTAGAC+GGG 0.530110 7:+70241847 None:intergenic
AATCTCCTGTAGGATCTAGT+TGG 0.530375 7:+70242210 None:intergenic
TTATCTTCATGATTCTGGAT+AGG 0.531353 7:+70245634 None:intergenic
CTATCTATTCAAAACTCACA+TGG 0.532631 7:-70241434 MsG0780039898.01.T01:CDS
CGTCGATGCCTGTAAGAGCT+AGG 0.536489 7:-70242245 MsG0780039898.01.T01:CDS
TGTTGTTGATGCTGCGGTGG+AGG 0.539529 7:-70245608 MsG0780039898.01.T01:CDS
CTCCTCCAACTAGATCCTAC+AGG 0.539873 7:-70242215 MsG0780039898.01.T01:CDS
TCATCCAGATGACCCCTCCT+TGG 0.541321 7:+70241911 None:intergenic
AGTCTTCTGAACACATGAGC+AGG 0.544172 7:+70242324 None:intergenic
AGTACCTAATGGTGTAGCTA+TGG 0.546694 7:-70245569 MsG0780039898.01.T01:CDS
TCTCCACGGTATGCTGATGC+TGG 0.548096 7:-70241665 MsG0780039898.01.T01:CDS
CATATTTCTTAAGAAGAGCT+CGG 0.549726 7:+70242727 None:intergenic
AGAACATGCCAGGTGCTCGC+AGG 0.549789 7:-70242677 MsG0780039898.01.T01:CDS
TAGATAACATTTGCAAGACA+TGG 0.549859 7:-70243999 MsG0780039898.01.T01:CDS
GGGTAGCCAGAGTCACGGGC+TGG 0.551246 7:+70241965 None:intergenic
GAGCTTGCTAAGAACATGCC+AGG 0.553348 7:-70242687 MsG0780039898.01.T01:CDS
GGTGATGATGATGATGTTGA+TGG 0.554199 7:-70244473 MsG0780039898.01.T01:CDS
GTCAATAAAGGAGTTTGCAA+AGG 0.555481 7:+70243649 None:intergenic
CTCCTGTAGGATCTAGTTGG+AGG 0.556005 7:+70242213 None:intergenic
TTGGGGAGATTACTGAAGCC+AGG 0.556224 7:-70244265 MsG0780039898.01.T01:CDS
GGGTGATGATATTATGGCAC+AGG 0.557778 7:-70243624 MsG0780039898.01.T01:intron
TCTCTTGGTGGTAGTGATGG+GGG 0.560113 7:-70241281 MsG0780039898.01.T01:CDS
TGGCTACCCTGACCTGCATA+GGG 0.560943 7:-70241951 MsG0780039898.01.T01:CDS
ACATAATCTTCATCCCATGA+AGG 0.561945 7:+70242750 None:intergenic
ACCTAATGGTGTAGCTATGG+TGG 0.562291 7:-70245566 MsG0780039898.01.T01:CDS
GGAGGTCGAAGGGGAAGTGG+AGG 0.562909 7:-70244585 MsG0780039898.01.T01:CDS
TACGAGACGTATCCCTATGC+AGG 0.563411 7:+70241939 None:intergenic
AGGAGCTATCATATAAAACT+AGG 0.564088 7:+70240652 None:intergenic
AGGAGGGGTCATCTGGATGA+TGG 0.564427 7:-70241908 MsG0780039898.01.T01:CDS
GTGGTAAACATGTTACTCAC+AGG 0.564528 7:-70242434 MsG0780039898.01.T01:CDS
CCTCCGAAAGTGGTGAAAAG+AGG 0.564825 7:-70245730 MsG0780039898.01.T01:CDS
GACGAGGGTCAGGAGGTCGA+AGG 0.565060 7:-70244596 MsG0780039898.01.T01:CDS
CATAATCTTCATCCCATGAA+GGG 0.565826 7:+70242751 None:intergenic
TATCTATTCAAAACTCACAT+GGG 0.565832 7:-70241433 MsG0780039898.01.T01:CDS
TGTGTGTCAGGCTCTCTTGG+TGG 0.566001 7:-70241293 MsG0780039898.01.T01:intron
TCATCACCAACATACTCCTC+AGG 0.566571 7:+70244644 None:intergenic
TCTGGCTGATGTAAAGGAAG+AGG 0.566817 7:-70244399 MsG0780039898.01.T01:CDS
GGTGGTGATTACTTATCTCG+TGG 0.569411 7:-70241239 MsG0780039898.01.T01:CDS
TTTGCAAAGGAAACCTCGGC+AGG 0.569590 7:+70243662 None:intergenic
GTCTCGTACTGCACCAAGGA+GGG 0.574387 7:-70241924 MsG0780039898.01.T01:CDS
TGAGCATCTGGCTGATGTAA+AGG 0.575900 7:-70244405 MsG0780039898.01.T01:CDS
GAAACTCTACTTCTTGGAGG+TGG 0.577034 7:+70242043 None:intergenic
TACAGATTATGGCTCTCAGG+TGG 0.577668 7:-70242020 MsG0780039898.01.T01:CDS
GGTCAGGGTAGCCAGAGTCA+CGG 0.577760 7:+70241960 None:intergenic
GGTTAATTCTAAATGTAAAG+AGG 0.578186 7:-70240704 MsG0780039898.01.T01:three_prime_UTR
TATTCACCTCTGCCATAACT+CGG 0.578689 7:+70241389 None:intergenic
GTCCTTCGCGATAACTTAGA+CGG 0.580638 7:+70241846 None:intergenic
AGGCTTGAAAGATCTAGTCT+AGG 0.580851 7:-70241479 MsG0780039898.01.T01:CDS
AGCAGTTATATGAGTGGCAG+CGG 0.581735 7:-70241063 MsG0780039898.01.T01:CDS
GCCTTCGCCTAACCCTGCAC+TGG 0.583734 7:+70242590 None:intergenic
TCCTCAGACTAAAAGGAACA+AGG 0.583768 7:-70244231 MsG0780039898.01.T01:CDS
ACCAGTGCAGGGTTAGGCGA+AGG 0.586623 7:-70242591 MsG0780039898.01.T01:CDS
AGACGGGGAGGTGGAGAAGG+AGG 0.589545 7:+70241863 None:intergenic
CGAGGGTCAGGAGGTCGAAG+GGG 0.589718 7:-70244594 MsG0780039898.01.T01:CDS
CAGATTAATGGCAAACAATG+TGG 0.592242 7:-70244057 MsG0780039898.01.T01:CDS
GATTTGACTATAGTAGAAGA+TGG 0.595203 7:-70243800 MsG0780039898.01.T01:CDS
GTAGAAGATGGTAACAATGA+GGG 0.596390 7:-70243788 MsG0780039898.01.T01:CDS
TTGCCAATCTTCCAATCTTG+CGG 0.597275 7:+70242400 None:intergenic
AGCATTACCAGTGCAGGGTT+AGG 0.599277 7:-70242597 MsG0780039898.01.T01:CDS
GGAATTGGAAGTATTTGTTG+GGG 0.599965 7:-70244339 MsG0780039898.01.T01:CDS
CATACCTGCTAATCTCCTGT+AGG 0.600207 7:+70242200 None:intergenic
AACAATGAGGGAACGAACTG+TGG 0.604469 7:-70243776 MsG0780039898.01.T01:CDS
AAAGGAAACACAAAAGCAGA+AGG 0.604504 7:-70244360 MsG0780039898.01.T01:CDS
GAGAGATTATGGCCGACCTG+TGG 0.605863 7:-70242071 MsG0780039898.01.T01:CDS
TGGAGTTGATAAACCTGCCG+AGG 0.608661 7:-70243675 MsG0780039898.01.T01:CDS
TGGTACGCATGCTGCTGCTG+TGG 0.613596 7:-70242631 MsG0780039898.01.T01:CDS
GGAAGAACCTGAAGAGAATG+TGG 0.615460 7:-70244564 MsG0780039898.01.T01:CDS
AGTAGAAGATGGTAACAATG+AGG 0.618854 7:-70243789 MsG0780039898.01.T01:CDS
ATATGTTTATGAAGAAGTCG+AGG 0.618879 7:-70244495 MsG0780039898.01.T01:CDS
GAGAATGTGGATGACGAAGA+GGG 0.619183 7:-70244551 MsG0780039898.01.T01:CDS
CTGAGAGCATTACCAGTGCA+GGG 0.619976 7:-70242602 MsG0780039898.01.T01:CDS
ACGTATCCCTATGCAGGTCA+GGG 0.623320 7:+70241945 None:intergenic
AGAGGGTGATACAGGTGATG+AGG 0.624317 7:-70244534 MsG0780039898.01.T01:CDS
CCTCAGACTAAAAGGAACAA+GGG 0.625261 7:-70244230 MsG0780039898.01.T01:CDS
ATCTACTCATCAAGTTATGG+TGG 0.625887 7:-70241257 MsG0780039898.01.T01:CDS
GGAGTTTGCAAAGGAAACCT+CGG 0.629424 7:+70243658 None:intergenic
TGAACAAGACGAGGGTCAGG+AGG 0.630494 7:-70244603 MsG0780039898.01.T01:CDS
CAGATAATGTGTCATAATCG+CGG 0.630520 7:+70241819 None:intergenic
TGGTGATGACTATGATGAGA+GGG 0.632078 7:-70244630 MsG0780039898.01.T01:CDS
CTCATGTGTTCAGAAGACTT+GGG 0.633447 7:-70242320 MsG0780039898.01.T01:CDS
TGGGGCGTATAGCAGTCGAC+AGG 0.635010 7:-70241414 MsG0780039898.01.T01:CDS
TCACTAGAAGGTCTAACTGG+TGG 0.635479 7:+70242288 None:intergenic
ATAAGATGGACGTCTTTGAG+AGG 0.637078 7:+70241997 None:intergenic
TATTCTAGTAGGGGTATGAA+CGG 0.637498 7:-70241090 MsG0780039898.01.T01:CDS
CAGTGGTTCCCGATATAGAG+AGG 0.638252 7:-70241600 MsG0780039898.01.T01:CDS
TTCTGCGGCAAAGAAAGCGA+AGG 0.639088 7:-70245707 MsG0780039898.01.T01:CDS
ATAATCTTCATCCCATGAAG+GGG 0.641485 7:+70242752 None:intergenic
TATAGCAGACAATGTAGAGG+AGG 0.642455 7:-70244738 MsG0780039898.01.T01:intron
TCTTATAGCAGACAATGTAG+AGG 0.643175 7:-70244741 MsG0780039898.01.T01:intron
AGTTATATGAGTGGCAGCGG+TGG 0.643461 7:-70241060 MsG0780039898.01.T01:CDS
TCTCGTACTGCACCAAGGAG+GGG 0.643992 7:-70241923 MsG0780039898.01.T01:CDS
TACAGAGCATGATCTGAGGA+AGG 0.644051 7:-70244300 MsG0780039898.01.T01:CDS
GTAGGATCTAGTTGGAGGAG+AGG 0.644349 7:+70242218 None:intergenic
GCAAGATTGGAAGATTGGCA+AGG 0.644404 7:-70242398 MsG0780039898.01.T01:CDS
GATAATGTGTCATAATCGCG+GGG 0.645186 7:+70241821 None:intergenic
TCATGTTGTTGATGCTGCGG+TGG 0.646283 7:-70245611 MsG0780039898.01.T01:CDS
TCGTCCATGTATTCTAGTAG+GGG 0.646419 7:-70241099 MsG0780039898.01.T01:CDS
CGTTTAGACTATGACTATGG+AGG 0.646761 7:-70241623 MsG0780039898.01.T01:CDS
GAGGGAAATTGAACAAGACG+AGG 0.648511 7:-70244612 MsG0780039898.01.T01:CDS
CCCCGTCTAAGTTATCGCGA+AGG 0.649105 7:-70241848 MsG0780039898.01.T01:CDS
GGTGCAGGTCGACCACGTGA+AGG 0.650773 7:+70242375 None:intergenic
TATGTTTATGAAGAAGTCGA+GGG 0.652329 7:-70244494 MsG0780039898.01.T01:CDS
CAGGAACCGAGTTATGGCAG+AGG 0.657705 7:-70241395 MsG0780039898.01.T01:intron
GTTATGATCGAAGACTTGAA+AGG 0.658113 7:-70241886 MsG0780039898.01.T01:CDS
TATGATCCTGAGGAGTATGT+TGG 0.661452 7:-70244650 MsG0780039898.01.T01:CDS
TTATCAGGAGTATGATCCTG+AGG 0.661619 7:-70244660 MsG0780039898.01.T01:CDS
ATCAGGATGATATTTCTCCA+CGG 0.662731 7:-70241679 MsG0780039898.01.T01:intron
ATGCTACAGAGCATGATCTG+AGG 0.664679 7:-70244304 MsG0780039898.01.T01:CDS
GAATTGGAAGTATTTGTTGG+GGG 0.666063 7:-70244338 MsG0780039898.01.T01:CDS
AGTGGTGAAAAGAGGTTCTG+CGG 0.666120 7:-70245722 MsG0780039898.01.T01:CDS
GAGGTGGCAGATCCACAGGT+CGG 0.666717 7:+70242059 None:intergenic
AGCTCTTCTTAAGAAATATG+GGG 0.672819 7:-70242724 MsG0780039898.01.T01:CDS
CGTCTCGTACTGCACCAAGG+AGG 0.672911 7:-70241925 MsG0780039898.01.T01:CDS
TCTTCTTAAGAAATATGGGG+CGG 0.674967 7:-70242721 MsG0780039898.01.T01:CDS
ACATGAGCAGGTCGACTCTG+TGG 0.675687 7:+70242336 None:intergenic
TGGTAAACATGTTACTCACA+GGG 0.677007 7:-70242433 MsG0780039898.01.T01:CDS
GCACCAGCATCAGCATACCG+TGG 0.677223 7:+70241662 None:intergenic
TCGCGATAACTTAGACGGGG+AGG 0.679135 7:+70241851 None:intergenic
ATCTATTCAAAACTCACATG+GGG 0.679420 7:-70241432 MsG0780039898.01.T01:CDS
AGAGAATGTGGATGACGAAG+AGG 0.681217 7:-70244552 MsG0780039898.01.T01:CDS
GGTAGTAGCAGTTATATGAG+TGG 0.683006 7:-70241069 MsG0780039898.01.T01:CDS
TTGGTGATGACTATGATGAG+AGG 0.686384 7:-70244631 MsG0780039898.01.T01:CDS
CCTTCGCGATAACTTAGACG+GGG 0.689612 7:+70241848 None:intergenic
TAATCATGTTGTTGATGCTG+CGG 0.690565 7:-70245614 MsG0780039898.01.T01:CDS
TAATCTTCATCCCATGAAGG+GGG 0.691997 7:+70242753 None:intergenic
GTGCCATAATATCATCACCC+AGG 0.702483 7:+70243627 None:intergenic
AGATTGGCAAGGCCTTCACG+TGG 0.708920 7:-70242387 MsG0780039898.01.T01:CDS
AGTATCACTGTCCTGACATG+TGG 0.709339 7:+70244029 None:intergenic
AGGGAAATTGAACAAGACGA+GGG 0.710596 7:-70244611 MsG0780039898.01.T01:CDS
TGTGGTGCAGGTCGACTACG+TGG 0.725851 7:+70242354 None:intergenic
ACTGTATCAAGAGAAGATCG+AGG 0.728612 7:+70240747 None:intergenic
ATACGTCTCGTACTGCACCA+AGG 0.731756 7:-70241928 MsG0780039898.01.T01:CDS
TGATGATGAGCATGCCAGTG+AGG 0.745670 7:-70244438 MsG0780039898.01.T01:CDS
ATAATGTGTCATAATCGCGG+GGG 0.775179 7:+70241822 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATCATAAAAAATAAAAAG+AGG + Chr7:70240810-70240829 None:intergenic 10.0%
!!! ATTTTAAACATTCATTTTAA+TGG - Chr7:70244574-70244593 MsG0780039898.01.T01:CDS 10.0%
!!! TATTTTTTATGATTTTTTGT+GGG - Chr7:70240815-70240834 MsG0780039898.01.T01:three_prime_UTR 10.0%
!!! TTATTTTTTATGATTTTTTG+TGG - Chr7:70240814-70240833 MsG0780039898.01.T01:three_prime_UTR 10.0%
!!! TTTAAAATAGAATTTTACTA+TGG + Chr7:70244562-70244581 None:intergenic 10.0%
!!! TTTATAGTAAACTATATTTT+TGG - Chr7:70242881-70242900 MsG0780039898.01.T01:intron 10.0%
!!! TTTTATAAATACTATAATGT+TGG - Chr7:70241528-70241547 MsG0780039898.01.T01:intron 10.0%
!! AAAAAATAAAAAGAGGAAAA+GGG + Chr7:70240803-70240822 None:intergenic 15.0%
!! AATAAAATAAAAGAACTTCA+CGG + Chr7:70241411-70241430 None:intergenic 15.0%
!! TAAAAAATAAAAAGAGGAAA+AGG + Chr7:70240804-70240823 None:intergenic 15.0%
!! TAATAAAATCTGAAAAACAA+TGG + Chr7:70243095-70243114 None:intergenic 15.0%
!!! TTTTATATATGGCTAAATAT+TGG - Chr7:70245159-70245178 MsG0780039898.01.T01:intron 15.0%
!! GATATAACATTATATCATAG+CGG - Chr7:70241092-70241111 MsG0780039898.01.T01:CDS 20.0%
!! TAAACATATCTAAATGTAAC+AGG - Chr7:70245430-70245449 MsG0780039898.01.T01:intron 20.0%
!! TCATTAACAGTTAAAAACAA+GGG + Chr7:70242457-70242476 None:intergenic 20.0%
!! TTCATTAACAGTTAAAAACA+AGG + Chr7:70242458-70242477 None:intergenic 20.0%
!! TTGAAGTTATTCAATTTATG+AGG - Chr7:70245609-70245628 MsG0780039898.01.T01:CDS 20.0%
!!! ATTCTTAAATTTTATTCTGC+TGG - Chr7:70245186-70245205 MsG0780039898.01.T01:intron 20.0%
!!! TAATCTTTTCTTCAAAATGA+CGG + Chr7:70245504-70245523 None:intergenic 20.0%
! AAATATAAAGATGGCATTTG+AGG + Chr7:70245357-70245376 None:intergenic 25.0%
! AAGGAGAAATTGAAACATTA+TGG - Chr7:70242495-70242514 MsG0780039898.01.T01:intron 25.0%
! AATTGGGAGAAATATAAAGA+TGG + Chr7:70245366-70245385 None:intergenic 25.0%
! ATAAAAATGAACCACTATTG+AGG + Chr7:70242866-70242885 None:intergenic 25.0%
! ATATGTTTAGACAAATTCAC+CGG + Chr7:70245419-70245438 None:intergenic 25.0%
! ATCTTTATATTTCTCCCAAT+TGG - Chr7:70245365-70245384 MsG0780039898.01.T01:intron 25.0%
! ATTACTTATAAAAGCAACAC+TGG - Chr7:70242931-70242950 MsG0780039898.01.T01:intron 25.0%
! ATTATGTTTGATGCATATTG+TGG - Chr7:70240874-70240893 MsG0780039898.01.T01:three_prime_UTR 25.0%
! CTAGACATTAAAACTACTTT+AGG + Chr7:70243044-70243063 None:intergenic 25.0%
! GATGATTATCAAGTGAATTT+AGG - Chr7:70240949-70240968 MsG0780039898.01.T01:intron 25.0%
! GGTTAATTCTAAATGTAAAG+AGG - Chr7:70245630-70245649 MsG0780039898.01.T01:CDS 25.0%
! GTTCATTTGGAAAGAAAATA+AGG - Chr7:70245711-70245730 MsG0780039898.01.T01:CDS 25.0%
! TAATAACAGAATCTCTACTA+TGG + Chr7:70244174-70244193 None:intergenic 25.0%
! TAATAGTAGTAAGCATTACT+CGG + Chr7:70242415-70242434 None:intergenic 25.0%
! TATCTATTCAAAACTCACAT+GGG - Chr7:70244901-70244920 MsG0780039898.01.T01:intron 25.0%
! TCTTTAATGTTGTCAAATAG+TGG - Chr7:70240992-70241011 MsG0780039898.01.T01:intron 25.0%
! TGACTACAATTTCAGATTAA+TGG - Chr7:70242265-70242284 MsG0780039898.01.T01:CDS 25.0%
! TTACTTATAAAAGCAACACT+GGG - Chr7:70242932-70242951 MsG0780039898.01.T01:intron 25.0%
! TTTGATAGACCATGATTAAA+TGG - Chr7:70241304-70241323 MsG0780039898.01.T01:intron 25.0%
!! AATCTTTTCTTCAAAATGAC+GGG + Chr7:70245503-70245522 None:intergenic 25.0%
!! GATAAATATTTAAAGCCATC+CGG + Chr7:70241575-70241594 None:intergenic 25.0%
!! TATCAAGTGAATTTAGGTTA+GGG - Chr7:70240955-70240974 MsG0780039898.01.T01:intron 25.0%
!! TGGAAGTAGTGTTTTATATA+TGG - Chr7:70245148-70245167 MsG0780039898.01.T01:intron 25.0%
!! TTATCAAGTGAATTTAGGTT+AGG - Chr7:70240954-70240973 MsG0780039898.01.T01:intron 25.0%
!!! AATTATGGATTTGTTACGTT+TGG - Chr7:70243683-70243702 MsG0780039898.01.T01:CDS 25.0%
!!! AGATTTTGAGGATAATTATC+AGG - Chr7:70241659-70241678 MsG0780039898.01.T01:CDS 25.0%
!!! ATCTTTTTCATATTCATCTG+TGG + Chr7:70241631-70241650 None:intergenic 25.0%
!!! ATTTCAGAGGTATAATTTTC+AGG - Chr7:70243370-70243389 MsG0780039898.01.T01:intron 25.0%
!!! CTTATTTTTCATTTCTCATC+AGG - Chr7:70244638-70244657 MsG0780039898.01.T01:CDS 25.0%
!!! TATTGTCGCAATTTTAAAAG+TGG - Chr7:70243303-70243322 MsG0780039898.01.T01:intron 25.0%
!!! TTTCAGAGGTATAATTTTCA+GGG - Chr7:70243371-70243390 MsG0780039898.01.T01:intron 25.0%
!!! TTTTGTACTTCTGTCATTTT+GGG - Chr7:70241346-70241365 MsG0780039898.01.T01:intron 25.0%
AAGTCATCTTATTCTTTAGG+CGG - Chr7:70245322-70245341 MsG0780039898.01.T01:intron 30.0%
AATAGTAGTAAGCATTACTC+GGG + Chr7:70242414-70242433 None:intergenic 30.0%
AATCTGAAAAACAATGGACA+TGG + Chr7:70243089-70243108 None:intergenic 30.0%
AGCTCTTCTTAAGAAATATG+GGG - Chr7:70243610-70243629 MsG0780039898.01.T01:intron 30.0%
AGGAGCTATCATATAAAACT+AGG + Chr7:70245685-70245704 None:intergenic 30.0%
AGGTAACAACTATTGTGTAT+AGG - Chr7:70241375-70241394 MsG0780039898.01.T01:intron 30.0%
AGTAGAGTTTCTACAGATTA+TGG - Chr7:70244303-70244322 MsG0780039898.01.T01:CDS 30.0%
ATAAGTTAGCAAAGAACTAC+AGG + Chr7:70244816-70244835 None:intergenic 30.0%
ATATGTTTATGAAGAAGTCG+AGG - Chr7:70241839-70241858 MsG0780039898.01.T01:CDS 30.0%
ATATTTAACCTAGTCTACTC+TGG - Chr7:70242991-70243010 MsG0780039898.01.T01:intron 30.0%
ATCAAATGCATCTAAATTGC+AGG - Chr7:70243532-70243551 MsG0780039898.01.T01:intron 30.0%
ATCTATTCAAAACTCACATG+GGG - Chr7:70244902-70244921 MsG0780039898.01.T01:intron 30.0%
ATGTTACTATCCTTTCTGAT+TGG - Chr7:70245128-70245147 MsG0780039898.01.T01:intron 30.0%
CATATTTCTTAAGAAGAGCT+CGG + Chr7:70243610-70243629 None:intergenic 30.0%
CATGATTATCTTCATGATTC+TGG + Chr7:70240708-70240727 None:intergenic 30.0%
CTATCTATTCAAAACTCACA+TGG - Chr7:70244900-70244919 MsG0780039898.01.T01:intron 30.0%
GACAGAAATAAGATGATGAT+CGG - Chr7:70243211-70243230 MsG0780039898.01.T01:intron 30.0%
GAGCTCTTCTTAAGAAATAT+GGG - Chr7:70243609-70243628 MsG0780039898.01.T01:intron 30.0%
GATTTGACTATAGTAGAAGA+TGG - Chr7:70242534-70242553 MsG0780039898.01.T01:intron 30.0%
GGATCTAGATCTTATTATTG+AGG - Chr7:70245298-70245317 MsG0780039898.01.T01:intron 30.0%
GTTTCAATTTCTCCTTTAAC+TGG + Chr7:70242491-70242510 None:intergenic 30.0%
TAGATAACATTTGCAAGACA+TGG - Chr7:70242335-70242354 MsG0780039898.01.T01:CDS 30.0%
TATATTGAACCTGCAAAAGA+TGG - Chr7:70242776-70242795 MsG0780039898.01.T01:CDS 30.0%
TATGTTTATGAAGAAGTCGA+GGG - Chr7:70241840-70241859 MsG0780039898.01.T01:CDS 30.0%
TCAGTTACACCAAAAACAAA+TGG + Chr7:70243513-70243532 None:intergenic 30.0%
TGAAGCACAAAACTCTTATT+AGG + Chr7:70243472-70243491 None:intergenic 30.0%
TGTATGTTATCGTATGATTG+TGG - Chr7:70243422-70243441 MsG0780039898.01.T01:intron 30.0%
TTATCTTCATGATTCTGGAT+AGG + Chr7:70240703-70240722 None:intergenic 30.0%
TTATGGAGTTGAAAGTTTCA+AGG - Chr7:70242512-70242531 MsG0780039898.01.T01:intron 30.0%
TTGAAGTAATCCTTGATTAG+TGG + Chr7:70245557-70245576 None:intergenic 30.0%
! AATTTTACTATGGCAGCATA+AGG + Chr7:70244552-70244571 None:intergenic 30.0%
! AGATGAACACTTAGATTTTG+AGG - Chr7:70241647-70241666 MsG0780039898.01.T01:CDS 30.0%
! CTTAAATTTTATTCTGCTGG+TGG - Chr7:70245189-70245208 MsG0780039898.01.T01:intron 30.0%
! GATGTGAATTTTGTAGCTTA+TGG - Chr7:70245466-70245485 MsG0780039898.01.T01:intron 30.0%
! TTGGAATTTTCCACTAATCA+AGG - Chr7:70245544-70245563 MsG0780039898.01.T01:intron 30.0%
! TTGTGAATTTCGATGGTTTT+GGG - Chr7:70241168-70241187 MsG0780039898.01.T01:intron 30.0%
! TTTGGAAGTTATGGGATTTT+TGG - Chr7:70241261-70241280 MsG0780039898.01.T01:CDS 30.0%
! TTTTGCAGGTTCAATATATC+AGG + Chr7:70242774-70242793 None:intergenic 30.0%
!! AAGGAATTGGAAGTATTTGT+TGG - Chr7:70241993-70242012 MsG0780039898.01.T01:CDS 30.0%
!! AGGAATTGGAAGTATTTGTT+GGG - Chr7:70241994-70242013 MsG0780039898.01.T01:CDS 30.0%
!! ATAAGAGTTTTGTGCTTCAT+AGG - Chr7:70243473-70243492 MsG0780039898.01.T01:intron 30.0%
!! GTTTTGTACTTCTGTCATTT+TGG - Chr7:70241345-70241364 MsG0780039898.01.T01:intron 30.0%
!!! AAGCTGTAAGTCTTTTTTCT+GGG - Chr7:70242365-70242384 MsG0780039898.01.T01:CDS 30.0%
!!! TAGTTTTATATGATAGCTCC+TGG - Chr7:70245684-70245703 MsG0780039898.01.T01:CDS 30.0%
!!! TGTGGGATTTTTTCATTCTT+TGG - Chr7:70240832-70240851 MsG0780039898.01.T01:three_prime_UTR 30.0%
!!! TTCCTCACATTTTGATTAGT+AGG - Chr7:70244835-70244854 MsG0780039898.01.T01:intron 30.0%
AAACTTCTGATGCCAGTTAA+AGG - Chr7:70242476-70242495 MsG0780039898.01.T01:CDS 35.0%
AAAGGAAACACAAAAGCAGA+AGG - Chr7:70241974-70241993 MsG0780039898.01.T01:CDS 35.0%
AACACAAAAGCAGAAGGAAT+TGG - Chr7:70241980-70241999 MsG0780039898.01.T01:CDS 35.0%
AACACTACTTCCAATCAGAA+AGG + Chr7:70245141-70245160 None:intergenic 35.0%
ACATAATCTTCATCCCATGA+AGG + Chr7:70243587-70243606 None:intergenic 35.0%
ACATGTTTACCACGAACTTT+CGG + Chr7:70243893-70243912 None:intergenic 35.0%
AGAAGATCAAAGATTACCAC+TGG + Chr7:70242194-70242213 None:intergenic 35.0%
AGATAATGTGTCATAATCGC+GGG + Chr7:70244517-70244536 None:intergenic 35.0%
AGCCTACTAATCAAAATGTG+AGG + Chr7:70244840-70244859 None:intergenic 35.0%
AGTAGAAGATGGTAACAATG+AGG - Chr7:70242545-70242564 MsG0780039898.01.T01:intron 35.0%
AGTCTAAACGAGATCTTGAT+TGG + Chr7:70244701-70244720 None:intergenic 35.0%
ATAACTTCCAAAGTACACCA+AGG + Chr7:70241253-70241272 None:intergenic 35.0%
ATAATCTTCATCCCATGAAG+GGG + Chr7:70243585-70243604 None:intergenic 35.0%
ATCAGGATGATATTTCTCCA+CGG - Chr7:70244655-70244674 MsG0780039898.01.T01:CDS 35.0%
ATCTACTCATCAAGTTATGG+TGG - Chr7:70245077-70245096 MsG0780039898.01.T01:intron 35.0%
ATTCGTCCATGTATTCTAGT+AGG - Chr7:70245233-70245252 MsG0780039898.01.T01:intron 35.0%
ATTGTGGCTGTTATGTGATA+TGG - Chr7:70240890-70240909 MsG0780039898.01.T01:intron 35.0%
CAGATAATGTGTCATAATCG+CGG + Chr7:70244518-70244537 None:intergenic 35.0%
CAGATTAATGGCAAACAATG+TGG - Chr7:70242277-70242296 MsG0780039898.01.T01:CDS 35.0%
CATAATCTTCATCCCATGAA+GGG + Chr7:70243586-70243605 None:intergenic 35.0%
CATATCTAAATGTAACAGGC+TGG - Chr7:70245434-70245453 MsG0780039898.01.T01:intron 35.0%
CATTTGCAAGACATGGAAAA+AGG - Chr7:70242342-70242361 MsG0780039898.01.T01:CDS 35.0%
CGAGCTCTTCTTAAGAAATA+TGG - Chr7:70243608-70243627 MsG0780039898.01.T01:intron 35.0%
CTATAGGCTATATCACATAG+CGG - Chr7:70241015-70241034 MsG0780039898.01.T01:intron 35.0%
CTTCTTTCAGGCAAAAGTTA+GGG - Chr7:70243847-70243866 MsG0780039898.01.T01:intron 35.0%
GAAAATAAGGTCCATGGATT+TGG - Chr7:70245724-70245743 MsG0780039898.01.T01:CDS 35.0%
GACAGAACTAAAAAATCCAG+TGG - Chr7:70242175-70242194 MsG0780039898.01.T01:intron 35.0%
GCTGGATAATCTCTATAAGA+TGG + Chr7:70244354-70244373 None:intergenic 35.0%
GCTGGATTGATTATGGAAAA+TGG - Chr7:70241495-70241514 MsG0780039898.01.T01:intron 35.0%
GGCAAGTCATCTTATTCTTT+AGG - Chr7:70245319-70245338 MsG0780039898.01.T01:intron 35.0%
GGTAATCTTTGATCTTCTCA+TGG - Chr7:70242196-70242215 MsG0780039898.01.T01:intron 35.0%
GTAGAAGATGGTAACAATGA+GGG - Chr7:70242546-70242565 MsG0780039898.01.T01:intron 35.0%
GTCAATAAAGGAGTTTGCAA+AGG + Chr7:70242688-70242707 None:intergenic 35.0%
GTTATGATCGAAGACTTGAA+AGG - Chr7:70244448-70244467 MsG0780039898.01.T01:CDS 35.0%
TAACTTCCAAAGTACACCAA+GGG + Chr7:70241252-70241271 None:intergenic 35.0%
TAATCATGTTGTTGATGCTG+CGG - Chr7:70240720-70240739 MsG0780039898.01.T01:three_prime_UTR 35.0%
TCTCGTTTAGACTATGACTA+TGG - Chr7:70244708-70244727 MsG0780039898.01.T01:CDS 35.0%
TCTGTAGAAACTCTACTTCT+TGG + Chr7:70244300-70244319 None:intergenic 35.0%
TCTTATAGCAGACAATGTAG+AGG - Chr7:70241593-70241612 MsG0780039898.01.T01:CDS 35.0%
TCTTCTTAAGAAATATGGGG+CGG - Chr7:70243613-70243632 MsG0780039898.01.T01:intron 35.0%
TGCTGAGTTATAGACTGATT+TGG - Chr7:70245525-70245544 MsG0780039898.01.T01:intron 35.0%
TGGAAAGAAAATAAGGTCCA+TGG - Chr7:70245718-70245737 MsG0780039898.01.T01:CDS 35.0%
TGGTAAACATGTTACTCACA+GGG - Chr7:70243901-70243920 MsG0780039898.01.T01:intron 35.0%
TGTGCAGTACCATTTAATCA+TGG + Chr7:70241316-70241335 None:intergenic 35.0%
TGTTGTCAAATAGTGGCTAT+AGG - Chr7:70240999-70241018 MsG0780039898.01.T01:intron 35.0%
TTATGGCACAGGTATATTTC+TGG - Chr7:70242721-70242740 MsG0780039898.01.T01:CDS 35.0%
TTCGTCCATGTATTCTAGTA+GGG - Chr7:70245234-70245253 MsG0780039898.01.T01:intron 35.0%
TTGATCTCATTCAAGCGTTT+GGG - Chr7:70242803-70242822 MsG0780039898.01.T01:intron 35.0%
TTGTGGCTGTTATGTGATAT+GGG - Chr7:70240891-70240910 MsG0780039898.01.T01:intron 35.0%
TTTCTTGTATGTTGTGTGTC+AGG - Chr7:70245029-70245048 MsG0780039898.01.T01:intron 35.0%
TTTGATCTCATTCAAGCGTT+TGG - Chr7:70242802-70242821 MsG0780039898.01.T01:intron 35.0%
! AGATCTAGTCTAGGATATAG+TGG - Chr7:70244864-70244883 MsG0780039898.01.T01:intron 35.0%
! AGGAAGGTTTTCAGTAAAGT+TGG - Chr7:70242050-70242069 MsG0780039898.01.T01:CDS 35.0%
! ATACGAGTGTTGTCTAATAG+TGG - Chr7:70241070-70241089 MsG0780039898.01.T01:CDS 35.0%
! ATCAAAGAACCATCTTTTGC+AGG + Chr7:70242788-70242807 None:intergenic 35.0%
! CTTGTGAATTTCGATGGTTT+TGG - Chr7:70241167-70241186 MsG0780039898.01.T01:intron 35.0%
! GAAGGTTTTCAGTAAAGTTG+GGG - Chr7:70242052-70242071 MsG0780039898.01.T01:CDS 35.0%
! GGAACAAGTTGAAGTTAGAA+AGG - Chr7:70241956-70241975 MsG0780039898.01.T01:CDS 35.0%
! GGAAGGTTTTCAGTAAAGTT+GGG - Chr7:70242051-70242070 MsG0780039898.01.T01:CDS 35.0%
! GTGTTTTATCTCATGTGATG+CGG - Chr7:70241469-70241488 MsG0780039898.01.T01:CDS 35.0%
! TATTCTAGTAGGGGTATGAA+CGG - Chr7:70245244-70245263 MsG0780039898.01.T01:intron 35.0%
! TGGTGTACTTTGGAAGTTAT+GGG - Chr7:70241253-70241272 MsG0780039898.01.T01:CDS 35.0%
! TGTTTTATCTCATGTGATGC+GGG - Chr7:70241470-70241489 MsG0780039898.01.T01:CDS 35.0%
! TTGGTGTACTTTGGAAGTTA+TGG - Chr7:70241252-70241271 MsG0780039898.01.T01:CDS 35.0%
! TTGTTGATTGCTATGATGCA+CGG - Chr7:70243133-70243152 MsG0780039898.01.T01:intron 35.0%
! TTTTATTCTGCTGGTGGTTT+AGG - Chr7:70245195-70245214 MsG0780039898.01.T01:intron 35.0%
!! CATTTCCTTGCTTTTGTCAA+GGG - Chr7:70242748-70242767 MsG0780039898.01.T01:CDS 35.0%
!! GAATTGGAAGTATTTGTTGG+GGG - Chr7:70241996-70242015 MsG0780039898.01.T01:CDS 35.0%
!! GGAATTGGAAGTATTTGTTG+GGG - Chr7:70241995-70242014 MsG0780039898.01.T01:CDS 35.0%
!! TCATTTCCTTGCTTTTGTCA+AGG - Chr7:70242747-70242766 MsG0780039898.01.T01:CDS 35.0%
!!! AATTCGAGAGTGTTTTGATC+CGG - Chr7:70241553-70241572 MsG0780039898.01.T01:intron 35.0%
!!! CAGAAGACAGATGTTGTTTT+TGG - Chr7:70242639-70242658 MsG0780039898.01.T01:CDS 35.0%
!!! GAAGCTGTAAGTCTTTTTTC+TGG - Chr7:70242364-70242383 MsG0780039898.01.T01:CDS 35.0%
!!! GAAGTTGTGCCATTTGTTTT+TGG - Chr7:70243501-70243520 MsG0780039898.01.T01:intron 35.0%
AAAGAACTACAGGATCAGGT+TGG + Chr7:70244806-70244825 None:intergenic 40.0%
AAGAACTACAGGATCAGGTT+GGG + Chr7:70244805-70244824 None:intergenic 40.0%
AATCTCCTGTAGGATCTAGT+TGG + Chr7:70244127-70244146 None:intergenic 40.0%
AATCTTCGACGTCATCCAAT+TGG + Chr7:70245383-70245402 None:intergenic 40.0%
ACCATAAGCCTCTCTATATC+GGG + Chr7:70244745-70244764 None:intergenic 40.0%
ACTGTATCAAGAGAAGATCG+AGG + Chr7:70245590-70245609 None:intergenic 40.0%
AGACAATGTAGAGGAGGTTA+AGG - Chr7:70241602-70241621 MsG0780039898.01.T01:CDS 40.0%
AGAGAAGATCGAGGATATCT+TGG + Chr7:70245581-70245600 None:intergenic 40.0%
AGGCAACAAAAAGGTCTGTT+TGG - Chr7:70243763-70243782 MsG0780039898.01.T01:CDS 40.0%
AGGCTTGAAAGATCTAGTCT+AGG - Chr7:70244855-70244874 MsG0780039898.01.T01:intron 40.0%
AGGGAAATTGAACAAGACGA+GGG - Chr7:70241723-70241742 MsG0780039898.01.T01:intron 40.0%
AGTACCTAATGGTGTAGCTA+TGG - Chr7:70240765-70240784 MsG0780039898.01.T01:three_prime_UTR 40.0%
AGTAGCACGAAGAGAGATTA+TGG - Chr7:70244252-70244271 MsG0780039898.01.T01:CDS 40.0%
ATAAGATGGACGTCTTTGAG+AGG + Chr7:70244340-70244359 None:intergenic 40.0%
ATAATGTGTCATAATCGCGG+GGG + Chr7:70244515-70244534 None:intergenic 40.0%
ATAGAGAGGCTTATGGTGAT+AGG - Chr7:70244748-70244767 MsG0780039898.01.T01:intron 40.0%
ATCATCACCCAGGTCAATAA+AGG + Chr7:70242700-70242719 None:intergenic 40.0%
ATCTTCGACGTCATCCAATT+GGG + Chr7:70245382-70245401 None:intergenic 40.0%
ATTACATCTTGCCACCTTCA+AGG - Chr7:70242431-70242450 MsG0780039898.01.T01:CDS 40.0%
CACCATAAGCCTCTCTATAT+CGG + Chr7:70244746-70244765 None:intergenic 40.0%
CATACCCCTACTAGAATACA+TGG + Chr7:70245242-70245261 None:intergenic 40.0%
CATTCAAGCGTTTGGGAATT+GGG - Chr7:70242810-70242829 MsG0780039898.01.T01:intron 40.0%
CCAACATAAATGTGTACCGA+TGG + Chr7:70242836-70242855 None:intergenic 40.0%
CCATCGGTACACATTTATGT+TGG - Chr7:70242833-70242852 MsG0780039898.01.T01:intron 40.0%
CCTCAGACTAAAAGGAACAA+GGG - Chr7:70242104-70242123 MsG0780039898.01.T01:intron 40.0%
CGCGATTATGACACATTATC+TGG - Chr7:70244516-70244535 MsG0780039898.01.T01:CDS 40.0%
CGTTGAATCCTCAGACTAAA+AGG - Chr7:70242096-70242115 MsG0780039898.01.T01:CDS 40.0%
CGTTTAGACTATGACTATGG+AGG - Chr7:70244711-70244730 MsG0780039898.01.T01:CDS 40.0%
CTCATGTGTTCAGAAGACTT+GGG - Chr7:70244014-70244033 MsG0780039898.01.T01:CDS 40.0%
GAAAAACAATGGACATGGCA+AGG + Chr7:70243084-70243103 None:intergenic 40.0%
GATAATGTGTCATAATCGCG+GGG + Chr7:70244516-70244535 None:intergenic 40.0%
GCAAACTCCTTTATTGACCT+GGG - Chr7:70242690-70242709 MsG0780039898.01.T01:CDS 40.0%
GCTTCTTTCAGGCAAAAGTT+AGG - Chr7:70243846-70243865 MsG0780039898.01.T01:intron 40.0%
GGCATCTACTCATCAAGTTA+TGG - Chr7:70245074-70245093 MsG0780039898.01.T01:intron 40.0%
GGTAGTAGCAGTTATATGAG+TGG - Chr7:70245265-70245284 MsG0780039898.01.T01:intron 40.0%
GGTTGTCTTGTGAATTTCGA+TGG - Chr7:70241161-70241180 MsG0780039898.01.T01:intron 40.0%
GTAGAAACTCTACTTCTTGG+AGG + Chr7:70244297-70244316 None:intergenic 40.0%
GTGGTAAACATGTTACTCAC+AGG - Chr7:70243900-70243919 MsG0780039898.01.T01:intron 40.0%
GTTAAAAACAAGGGCCTTGA+AGG + Chr7:70242448-70242467 None:intergenic 40.0%
TAATCTTCATCCCATGAAGG+GGG + Chr7:70243584-70243603 None:intergenic 40.0%
TAGCAAAGAACTACAGGATC+AGG + Chr7:70244810-70244829 None:intergenic 40.0%
TATAGCAGACAATGTAGAGG+AGG - Chr7:70241596-70241615 MsG0780039898.01.T01:CDS 40.0%
TATTCACCTCTGCCATAACT+CGG + Chr7:70244948-70244967 None:intergenic 40.0%
TCAGCTGAAACAGTACCTAA+TGG - Chr7:70240754-70240773 MsG0780039898.01.T01:three_prime_UTR 40.0%
TCATGATTCTGGATAGGTTC+AGG + Chr7:70240697-70240716 None:intergenic 40.0%
TCATTCAAGCGTTTGGGAAT+TGG - Chr7:70242809-70242828 MsG0780039898.01.T01:intron 40.0%
TCCTCAGACTAAAAGGAACA+AGG - Chr7:70242103-70242122 MsG0780039898.01.T01:intron 40.0%
TCGTCCATGTATTCTAGTAG+GGG - Chr7:70245235-70245254 MsG0780039898.01.T01:intron 40.0%
TGACCTGGGTGATGATATTA+TGG - Chr7:70242704-70242723 MsG0780039898.01.T01:CDS 40.0%
TGCAAACTCCTTTATTGACC+TGG - Chr7:70242689-70242708 MsG0780039898.01.T01:CDS 40.0%
TGTCTTCTGCAATCGCTTAT+AGG + Chr7:70242628-70242647 None:intergenic 40.0%
TGTGGCTGTTATGTGATATG+GGG - Chr7:70240892-70240911 MsG0780039898.01.T01:intron 40.0%
TTCTACAGATTATGGCTCTC+AGG - Chr7:70244311-70244330 MsG0780039898.01.T01:CDS 40.0%
TTGCCAATCTTCCAATCTTG+CGG + Chr7:70243937-70243956 None:intergenic 40.0%
TTGGCTTCAAACCTCAATAG+TGG - Chr7:70242852-70242871 MsG0780039898.01.T01:intron 40.0%
TTTAACCTAGTCTACTCTGG+AGG - Chr7:70242994-70243013 MsG0780039898.01.T01:intron 40.0%
! ACTGTCTGTAGCTATTTCAG+AGG - Chr7:70243357-70243376 MsG0780039898.01.T01:intron 40.0%
! CGTCTATTTCTCTCACTAGA+AGG + Chr7:70244061-70244080 None:intergenic 40.0%
! GAACCTCTTTTCACCACTTT+CGG + Chr7:70240610-70240629 None:intergenic 40.0%
! GGTGATAGTGAATGAAGTGA+TGG - Chr7:70241199-70241218 MsG0780039898.01.T01:intron 40.0%
! GGTGATGATGATGATGTTGA+TGG - Chr7:70241861-70241880 MsG0780039898.01.T01:CDS 40.0%
! TATGATCCTGAGGAGTATGT+TGG - Chr7:70241684-70241703 MsG0780039898.01.T01:intron 40.0%
! TGGTGATGACTATGATGAGA+GGG - Chr7:70241704-70241723 MsG0780039898.01.T01:intron 40.0%
! TTATCAGGAGTATGATCCTG+AGG - Chr7:70241674-70241693 MsG0780039898.01.T01:CDS 40.0%
!! GAGTTTTGTGCTTCATAGGT+TGG - Chr7:70243477-70243496 MsG0780039898.01.T01:intron 40.0%
!! TTGCTGTTGATTCTGAGTTG+TGG + Chr7:70240665-70240684 None:intergenic 40.0%
!! TTGGTGATGACTATGATGAG+AGG - Chr7:70241703-70241722 MsG0780039898.01.T01:intron 40.0%
!!! TCTCTCTTCGTGCTACTTTT+TGG + Chr7:70244249-70244268 None:intergenic 40.0%
!!! TCTGTCATTTTGGGAACTTG+AGG - Chr7:70241355-70241374 MsG0780039898.01.T01:intron 40.0%
AAAAACAAGGGCCTTGAAGG+TGG + Chr7:70242445-70242464 None:intergenic 45.0%
AACAATGAGGGAACGAACTG+TGG - Chr7:70242558-70242577 MsG0780039898.01.T01:intron 45.0%
AACAATGGACATGGCAAGGA+TGG + Chr7:70243080-70243099 None:intergenic 45.0%
AATTGAACAAGACGAGGGTC+AGG - Chr7:70241728-70241747 MsG0780039898.01.T01:intron 45.0%
ACCTAATGGTGTAGCTATGG+TGG - Chr7:70240768-70240787 MsG0780039898.01.T01:three_prime_UTR 45.0%
AGAGAATGTGGATGACGAAG+AGG - Chr7:70241782-70241801 MsG0780039898.01.T01:intron 45.0%
AGATCCTACAGGAGATTAGC+AGG - Chr7:70244130-70244149 MsG0780039898.01.T01:intron 45.0%
AGCAGTTATATGAGTGGCAG+CGG - Chr7:70245271-70245290 MsG0780039898.01.T01:intron 45.0%
AGTATCACTGTCCTGACATG+TGG + Chr7:70242308-70242327 None:intergenic 45.0%
AGTCTTCTGAACACATGAGC+AGG + Chr7:70244013-70244032 None:intergenic 45.0%
AGTGGTGAAAAGAGGTTCTG+CGG - Chr7:70240612-70240631 MsG0780039898.01.T01:three_prime_UTR 45.0%
ATGCTACAGAGCATGATCTG+AGG - Chr7:70242030-70242049 MsG0780039898.01.T01:CDS 45.0%
ATGTGGTATCACCACATGTC+AGG - Chr7:70242294-70242313 MsG0780039898.01.T01:CDS 45.0%
ATTCTGCTGGTGGTTTAGGT+TGG - Chr7:70245199-70245218 MsG0780039898.01.T01:intron 45.0%
CATACCTGCTAATCTCCTGT+AGG + Chr7:70244137-70244156 None:intergenic 45.0%
CTCTCACTAGAAGGTCTAAC+TGG + Chr7:70244052-70244071 None:intergenic 45.0%
CTTTCCAAATGAACAGAGCC+AGG + Chr7:70245705-70245724 None:intergenic 45.0%
GAAACTCTACTTCTTGGAGG+TGG + Chr7:70244294-70244313 None:intergenic 45.0%
GAATGCATGACGTTGTTTGG+AGG + Chr7:70244781-70244800 None:intergenic 45.0%
GAGAATGTGGATGACGAAGA+GGG - Chr7:70241783-70241802 MsG0780039898.01.T01:intron 45.0%
GAGGGAAATTGAACAAGACG+AGG - Chr7:70241722-70241741 MsG0780039898.01.T01:intron 45.0%
GCAAGATTGGAAGATTGGCA+AGG - Chr7:70243936-70243955 MsG0780039898.01.T01:intron 45.0%
GCTCATGTGTTCAGAAGACT+TGG - Chr7:70244013-70244032 MsG0780039898.01.T01:CDS 45.0%
GGAAGAACCTGAAGAGAATG+TGG - Chr7:70241770-70241789 MsG0780039898.01.T01:intron 45.0%
GGAGTTTGCAAAGGAAACCT+CGG + Chr7:70242679-70242698 None:intergenic 45.0%
GGGTGATGATATTATGGCAC+AGG - Chr7:70242710-70242729 MsG0780039898.01.T01:CDS 45.0%
GGTGGTGATTACTTATCTCG+TGG - Chr7:70245095-70245114 MsG0780039898.01.T01:intron 45.0%
GTATGATTGTGGCTGACTGT+TGG - Chr7:70243433-70243452 MsG0780039898.01.T01:intron 45.0%
GTCCTTCGCGATAACTTAGA+CGG + Chr7:70244491-70244510 None:intergenic 45.0%
GTGCCATAATATCATCACCC+AGG + Chr7:70242710-70242729 None:intergenic 45.0%
GTTAGGCGAAGGCAACAAAA+AGG - Chr7:70243754-70243773 MsG0780039898.01.T01:CDS 45.0%
TACAGAGCATGATCTGAGGA+AGG - Chr7:70242034-70242053 MsG0780039898.01.T01:CDS 45.0%
TACAGATTATGGCTCTCAGG+TGG - Chr7:70244314-70244333 MsG0780039898.01.T01:CDS 45.0%
TAGCCGCAAGATTGGAAGAT+TGG - Chr7:70243931-70243950 MsG0780039898.01.T01:intron 45.0%
TCACTAGAAGGTCTAACTGG+TGG + Chr7:70244049-70244068 None:intergenic 45.0%
TCATCACCAACATACTCCTC+AGG + Chr7:70241693-70241712 None:intergenic 45.0%
TCCACCATAGCTACACCATT+AGG + Chr7:70240772-70240791 None:intergenic 45.0%
TCCCGATATAGAGAGGCTTA+TGG - Chr7:70244741-70244760 MsG0780039898.01.T01:intron 45.0%
TCCTTCGCGATAACTTAGAC+GGG + Chr7:70244490-70244509 None:intergenic 45.0%
TCGTCATCCACATTCTCTTC+AGG + Chr7:70241780-70241799 None:intergenic 45.0%
TCTGGCTGATGTAAAGGAAG+AGG - Chr7:70241935-70241954 MsG0780039898.01.T01:CDS 45.0%
TGAGCATCTGGCTGATGTAA+AGG - Chr7:70241929-70241948 MsG0780039898.01.T01:CDS 45.0%
TGATTTACTGCCCCCTTCAT+GGG - Chr7:70243571-70243590 MsG0780039898.01.T01:intron 45.0%
TGTTTCCTGCGATCATGGAT+TGG - Chr7:70241131-70241150 MsG0780039898.01.T01:intron 45.0%
TTACCACGAACTTTCGGAAG+AGG + Chr7:70243887-70243906 None:intergenic 45.0%
TTCGTCTCGTTCAGATGCTA+AGG - Chr7:70242599-70242618 MsG0780039898.01.T01:CDS 45.0%
TTGATTTACTGCCCCCTTCA+TGG - Chr7:70243570-70243589 MsG0780039898.01.T01:intron 45.0%
! AGAACTACAGGATCAGGTTG+GGG + Chr7:70244804-70244823 None:intergenic 45.0%
! ATTTGTTGGGGGCCTAAACA+AGG - Chr7:70242007-70242026 MsG0780039898.01.T01:CDS 45.0%
! CCCTTGTTCCTTTTAGTCTG+AGG + Chr7:70242107-70242126 None:intergenic 45.0%
! CGCTTCTTGTTGCTTCTTTC+AGG - Chr7:70243835-70243854 MsG0780039898.01.T01:CDS 45.0%
! GCTCTGTAGCATCCTTGTTT+AGG + Chr7:70242022-70242041 None:intergenic 45.0%
! TCTATTTCTTGCCGCCTTCA+AGG - Chr7:70242388-70242407 MsG0780039898.01.T01:CDS 45.0%
! TTCTGGATAGGTTCAGGTTC+AGG + Chr7:70240691-70240710 None:intergenic 45.0%
!! GACATTTCTAGCCGCAAGAT+TGG - Chr7:70243923-70243942 MsG0780039898.01.T01:intron 45.0%
!! GATGTTGATGGTGATGTTGC+TGG - Chr7:70241873-70241892 MsG0780039898.01.T01:CDS 45.0%
!! TCTTCAAAATGACGGGCATC+AGG + Chr7:70245496-70245515 None:intergenic 45.0%
!! ATTATAGTATTTATAAAATT+AGG + Chr7:70241526-70241545 None:intergenic 5.0%
!! TTATAGTATTTATAAAATTA+GGG + Chr7:70241525-70241544 None:intergenic 5.0%
AAGATTGCAGACCTGGTCAC+CGG - Chr7:70245397-70245416 MsG0780039898.01.T01:intron 50.0%
AAGCATTACTCGGGCCTTGA+AGG + Chr7:70242405-70242424 None:intergenic 50.0%
ACGTATCCCTATGCAGGTCA+GGG + Chr7:70244392-70244411 None:intergenic 50.0%
AGACAAATTCACCGGTGACC+AGG + Chr7:70245411-70245430 None:intergenic 50.0%
AGACCTCTTCCGAAAGTTCG+TGG - Chr7:70243881-70243900 MsG0780039898.01.T01:intron 50.0%
AGAGGGTGATACAGGTGATG+AGG - Chr7:70241800-70241819 MsG0780039898.01.T01:CDS 50.0%
AGCATTACCAGTGCAGGGTT+AGG - Chr7:70243737-70243756 MsG0780039898.01.T01:CDS 50.0%
AGTCGACAGGAACCGAGTTA+TGG - Chr7:70244933-70244952 MsG0780039898.01.T01:intron 50.0%
AGTTATATGAGTGGCAGCGG+TGG - Chr7:70245274-70245293 MsG0780039898.01.T01:intron 50.0%
ATACGTCTCGTACTGCACCA+AGG - Chr7:70244406-70244425 MsG0780039898.01.T01:CDS 50.0%
CAGTGGTTCCCGATATAGAG+AGG - Chr7:70244734-70244753 MsG0780039898.01.T01:CDS 50.0%
CCTCCGAAAGTGGTGAAAAG+AGG - Chr7:70240604-70240623 MsG0780039898.01.T01:three_prime_UTR 50.0%
CCTTCGCGATAACTTAGACG+GGG + Chr7:70244489-70244508 None:intergenic 50.0%
CTCCTCCAACTAGATCCTAC+AGG - Chr7:70244119-70244138 MsG0780039898.01.T01:intron 50.0%
CTCCTGTAGGATCTAGTTGG+AGG + Chr7:70244124-70244143 None:intergenic 50.0%
GACTATGACTATGGAGGCAG+TGG - Chr7:70244717-70244736 MsG0780039898.01.T01:CDS 50.0%
GATGACGAAGAGGGTGATAC+AGG - Chr7:70241792-70241811 MsG0780039898.01.T01:intron 50.0%
GCGGGATGCTGGATTGATTA+TGG - Chr7:70241488-70241507 MsG0780039898.01.T01:intron 50.0%
GGGGAATGCATGACGTTGTT+TGG + Chr7:70244784-70244803 None:intergenic 50.0%
GGTGCTCGCAGGAAGAATTA+TGG - Chr7:70243668-70243687 MsG0780039898.01.T01:CDS 50.0%
GTAGGATCTAGTTGGAGGAG+AGG + Chr7:70244119-70244138 None:intergenic 50.0%
GTGGCTGACTGTTGGACATA+TGG - Chr7:70243441-70243460 MsG0780039898.01.T01:intron 50.0%
TAATTCTTCCTGCGAGCACC+TGG + Chr7:70243668-70243687 None:intergenic 50.0%
TACGAGACGTATCCCTATGC+AGG + Chr7:70244398-70244417 None:intergenic 50.0%
TCAGGCCCTTGACAAAAGCA+AGG + Chr7:70242756-70242775 None:intergenic 50.0%
TCATGTTGTTGATGCTGCGG+TGG - Chr7:70240723-70240742 MsG0780039898.01.T01:three_prime_UTR 50.0%
TCCATGATCGCAGGAAACAG+CGG + Chr7:70241130-70241149 None:intergenic 50.0%
TGTTGTGTGTCAGGCTCTCT+TGG - Chr7:70245038-70245057 MsG0780039898.01.T01:intron 50.0%
TTCCAAAGTACACCAAGGGC+TGG + Chr7:70241248-70241267 None:intergenic 50.0%
TTCTGCGGCAAAGAAAGCGA+AGG - Chr7:70240627-70240646 MsG0780039898.01.T01:three_prime_UTR 50.0%
TTGGGGAGATTACTGAAGCC+AGG - Chr7:70242069-70242088 MsG0780039898.01.T01:CDS 50.0%
TTTGCAAAGGAAACCTCGGC+AGG + Chr7:70242675-70242694 None:intergenic 50.0%
! CCTCTTTTCACCACTTTCGG+AGG + Chr7:70240607-70240626 None:intergenic 50.0%
! CTCTCTTGGTGGTAGTGATG+GGG - Chr7:70245052-70245071 MsG0780039898.01.T01:intron 50.0%
! GCTCTCTTGGTGGTAGTGAT+GGG - Chr7:70245051-70245070 MsG0780039898.01.T01:intron 50.0%
! TCTCTTGGTGGTAGTGATGG+GGG - Chr7:70245053-70245072 MsG0780039898.01.T01:intron 50.0%
! TGATGATGAGCATGCCAGTG+AGG - Chr7:70241896-70241915 MsG0780039898.01.T01:CDS 50.0%
!! AGCTCCTGGCTCTGTTCATT+TGG - Chr7:70245698-70245717 MsG0780039898.01.T01:CDS 50.0%
!! CGATCATGGATTGGCAACGT+TGG - Chr7:70241140-70241159 MsG0780039898.01.T01:intron 50.0%
!! CTGAGAGCATTACCAGTGCA+GGG - Chr7:70243732-70243751 MsG0780039898.01.T01:CDS 50.0%
!! CTTACAGGCATCGACGTAAC+AGG + Chr7:70244085-70244104 None:intergenic 50.0%
!! GAACTACAGGATCAGGTTGG+GGG + Chr7:70244803-70244822 None:intergenic 50.0%
!! GAGCTTGCTAAGAACATGCC+AGG - Chr7:70243647-70243666 MsG0780039898.01.T01:CDS 50.0%
!! TGGAGTTGATAAACCTGCCG+AGG - Chr7:70242659-70242678 MsG0780039898.01.T01:CDS 50.0%
!!! CGAGAGTGTTTTGATCCGGA+TGG - Chr7:70241557-70241576 MsG0780039898.01.T01:intron 50.0%
!!! CGATGGTTTTGGGAGACTAC+TGG - Chr7:70241178-70241197 MsG0780039898.01.T01:intron 50.0%
AGATTGGCAAGGCCTTCACG+TGG - Chr7:70243947-70243966 MsG0780039898.01.T01:intron 55.0%
AGGAGGGGTCATCTGGATGA+TGG - Chr7:70244426-70244445 MsG0780039898.01.T01:CDS 55.0%
CAAAGTACACCAAGGGCTGG+TGG + Chr7:70241245-70241264 None:intergenic 55.0%
CAGGAACCGAGTTATGGCAG+AGG - Chr7:70244939-70244958 MsG0780039898.01.T01:intron 55.0%
CATTACTCGGGCCTTGAAGG+CGG + Chr7:70242402-70242421 None:intergenic 55.0%
CCCCGTCTAAGTTATCGCGA+AGG - Chr7:70244486-70244505 MsG0780039898.01.T01:CDS 55.0%
CGATAACTTAGACGGGGAGG+TGG + Chr7:70244483-70244502 None:intergenic 55.0%
CGTCGATGCCTGTAAGAGCT+AGG - Chr7:70244089-70244108 MsG0780039898.01.T01:intron 55.0%
CGTTGCCAATCCATGATCGC+AGG + Chr7:70241139-70241158 None:intergenic 55.0%
CTCATGCACGTTCTCCTCAC+TGG + Chr7:70241913-70241932 None:intergenic 55.0%
CTGAGGATTCAACGTCGTCC+TGG + Chr7:70242090-70242109 None:intergenic 55.0%
GACGTATCCCTATGCAGGTC+AGG + Chr7:70244393-70244412 None:intergenic 55.0%
GACGTCGAAGATTGCAGACC+TGG - Chr7:70245390-70245409 MsG0780039898.01.T01:intron 55.0%
GAGAGATTATGGCCGACCTG+TGG - Chr7:70244263-70244282 MsG0780039898.01.T01:CDS 55.0%
GATCTAGTTGGAGGAGAGGC+TGG + Chr7:70244115-70244134 None:intergenic 55.0%
GATTATCCAGCCCGTGACTC+TGG - Chr7:70244363-70244382 MsG0780039898.01.T01:CDS 55.0%
GCGTTTGGGAATTGGGCCAT+CGG - Chr7:70242817-70242836 MsG0780039898.01.T01:intron 55.0%
GGAGAACGTGCATGAGCATC+TGG - Chr7:70241917-70241936 MsG0780039898.01.T01:CDS 55.0%
GTCTCGTACTGCACCAAGGA+GGG - Chr7:70244410-70244429 MsG0780039898.01.T01:CDS 55.0%
TATATGAGTGGCAGCGGTGG+TGG - Chr7:70245277-70245296 MsG0780039898.01.T01:intron 55.0%
TCATCCAGATGACCCCTCCT+TGG + Chr7:70244426-70244445 None:intergenic 55.0%
TCCAGCCTCCAGAGTAGACT+AGG + Chr7:70243002-70243021 None:intergenic 55.0%
TCGCGATAACTTAGACGGGG+AGG + Chr7:70244486-70244505 None:intergenic 55.0%
TCTCATGTGATGCGGGATGC+TGG - Chr7:70241477-70241496 MsG0780039898.01.T01:CDS 55.0%
TCTCCACGGTATGCTGATGC+TGG - Chr7:70244669-70244688 MsG0780039898.01.T01:CDS 55.0%
TCTCGTACTGCACCAAGGAG+GGG - Chr7:70244411-70244430 MsG0780039898.01.T01:CDS 55.0%
TGAACAAGACGAGGGTCAGG+AGG - Chr7:70241731-70241750 MsG0780039898.01.T01:intron 55.0%
TGACATGTTCCACCAGCCCT+TGG - Chr7:70241233-70241252 MsG0780039898.01.T01:CDS 55.0%
TGGCTACCCTGACCTGCATA+GGG - Chr7:70244383-70244402 MsG0780039898.01.T01:CDS 55.0%
TGTGTGTCAGGCTCTCTTGG+TGG - Chr7:70245041-70245060 MsG0780039898.01.T01:intron 55.0%
TGTTGTTGATGCTGCGGTGG+AGG - Chr7:70240726-70240745 MsG0780039898.01.T01:three_prime_UTR 55.0%
! ACATGAGCAGGTCGACTCTG+TGG + Chr7:70244001-70244020 None:intergenic 55.0%
! ACCGCTGTTTCCTGCGATCA+TGG - Chr7:70241126-70241145 MsG0780039898.01.T01:intron 55.0%
! ACCTAGTCTACTCTGGAGGC+TGG - Chr7:70242998-70243017 MsG0780039898.01.T01:intron 55.0%
! CACCAGCCCTTGGTGTACTT+TGG - Chr7:70241243-70241262 MsG0780039898.01.T01:CDS 55.0%
! GGCTCTCTTGGTGGTAGTGA+TGG - Chr7:70245050-70245069 MsG0780039898.01.T01:intron 55.0%
! TGTAACAGGCTGGCTGCTGT+TGG - Chr7:70245444-70245463 MsG0780039898.01.T01:intron 55.0%
!! CTGCTGGTGGTTTAGGTTGG+TGG - Chr7:70245202-70245221 MsG0780039898.01.T01:intron 55.0%
!! GCTGAGAGCATTACCAGTGC+AGG - Chr7:70243731-70243750 MsG0780039898.01.T01:CDS 55.0%
ACCAGTGCAGGGTTAGGCGA+AGG - Chr7:70243743-70243762 MsG0780039898.01.T01:CDS 60.0%
ACGAGGGTCAGGAGGTCGAA+GGG - Chr7:70241739-70241758 MsG0780039898.01.T01:intron 60.0%
AGAACATGCCAGGTGCTCGC+AGG - Chr7:70243657-70243676 MsG0780039898.01.T01:CDS 60.0%
CGTCTCGTACTGCACCAAGG+AGG - Chr7:70244409-70244428 MsG0780039898.01.T01:CDS 60.0%
CTGGCTACCCTGACCTGCAT+AGG - Chr7:70244382-70244401 MsG0780039898.01.T01:CDS 60.0%
CTTAGACGGGGAGGTGGAGA+AGG + Chr7:70244477-70244496 None:intergenic 60.0%
CTTGGAGGTGGCAGATCCAC+AGG + Chr7:70244282-70244301 None:intergenic 60.0%
GAGGTGGCAGATCCACAGGT+CGG + Chr7:70244278-70244297 None:intergenic 60.0%
GCACCAGCATCAGCATACCG+TGG + Chr7:70244675-70244694 None:intergenic 60.0%
GGTCAGGGTAGCCAGAGTCA+CGG + Chr7:70244377-70244396 None:intergenic 60.0%
GTCAGGGTAGCCAGAGTCAC+GGG + Chr7:70244376-70244395 None:intergenic 60.0%
TCAGGAGGTCGAAGGGGAAG+TGG - Chr7:70241746-70241765 MsG0780039898.01.T01:intron 60.0%
TGCACCAAGGAGGGGTCATC+TGG - Chr7:70244419-70244438 MsG0780039898.01.T01:CDS 60.0%
TGGGGCGTATAGCAGTCGAC+AGG - Chr7:70244920-70244939 MsG0780039898.01.T01:intron 60.0%
TGGTACGCATGCTGCTGCTG+TGG - Chr7:70243703-70243722 MsG0780039898.01.T01:CDS 60.0%
TGTGGTGCAGGTCGACTACG+TGG + Chr7:70243983-70244002 None:intergenic 60.0%
!! GAGGCTGGCCTAGCTCTTAC+AGG + Chr7:70244100-70244119 None:intergenic 60.0%
AGACGGGGAGGTGGAGAAGG+AGG + Chr7:70244474-70244493 None:intergenic 65.0%
CGAGGGTCAGGAGGTCGAAG+GGG - Chr7:70241740-70241759 MsG0780039898.01.T01:intron 65.0%
GACGAGGGTCAGGAGGTCGA+AGG - Chr7:70241738-70241757 MsG0780039898.01.T01:intron 65.0%
GCAGGTCGACTACGTGGTGC+AGG + Chr7:70243977-70243996 None:intergenic 65.0%
GCCTTCGCCTAACCCTGCAC+TGG + Chr7:70243747-70243766 None:intergenic 65.0%
GGAGGTCGAAGGGGAAGTGG+AGG - Chr7:70241749-70241768 MsG0780039898.01.T01:intron 65.0%
GGTGCAGGTCGACCACGTGA+AGG + Chr7:70243962-70243981 None:intergenic 65.0%
! GCAGGTCGACTCTGTGGTGC+AGG + Chr7:70243995-70244014 None:intergenic 65.0%
GGGTAGCCAGAGTCACGGGC+TGG + Chr7:70244372-70244391 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr7 gene 70240601 70245755 70240601 ID=MsG0780039898.01;Name=MsG0780039898.01
Chr7 mRNA 70240601 70245755 70240601 ID=MsG0780039898.01.T01;Parent=MsG0780039898.01;Name=MsG0780039898.01.T01;_AED=0.40;_eAED=0.40;_QI=0|0.45|0.41|1|0.90|0.83|12|305|783
Chr7 exon 70240601 70240904 70240601 ID=MsG0780039898.01.T01:exon:13106;Parent=MsG0780039898.01.T01
Chr7 exon 70241037 70241139 70241037 ID=MsG0780039898.01.T01:exon:13105;Parent=MsG0780039898.01.T01
Chr7 exon 70241232 70241305 70241232 ID=MsG0780039898.01.T01:exon:13104;Parent=MsG0780039898.01.T01
Chr7 exon 70241396 70241499 70241396 ID=MsG0780039898.01.T01:exon:13103;Parent=MsG0780039898.01.T01
Chr7 exon 70241587 70241696 70241587 ID=MsG0780039898.01.T01:exon:13102;Parent=MsG0780039898.01.T01
Chr7 exon 70241793 70242118 70241793 ID=MsG0780039898.01.T01:exon:13101;Parent=MsG0780039898.01.T01
Chr7 exon 70242205 70242499 70242205 ID=MsG0780039898.01.T01:exon:13100;Parent=MsG0780039898.01.T01
Chr7 exon 70242581 70242802 70242581 ID=MsG0780039898.01.T01:exon:13099;Parent=MsG0780039898.01.T01
Chr7 exon 70243625 70243864 70243625 ID=MsG0780039898.01.T01:exon:13098;Parent=MsG0780039898.01.T01
Chr7 exon 70243987 70244076 70243987 ID=MsG0780039898.01.T01:exon:13097;Parent=MsG0780039898.01.T01
Chr7 exon 70244160 70244755 70244160 ID=MsG0780039898.01.T01:exon:13096;Parent=MsG0780039898.01.T01
Chr7 exon 70245563 70245755 70245563 ID=MsG0780039898.01.T01:exon:13095;Parent=MsG0780039898.01.T01
Chr7 CDS 70245563 70245755 70245563 ID=MsG0780039898.01.T01:cds;Parent=MsG0780039898.01.T01
Chr7 CDS 70244160 70244755 70244160 ID=MsG0780039898.01.T01:cds;Parent=MsG0780039898.01.T01
Chr7 CDS 70243987 70244076 70243987 ID=MsG0780039898.01.T01:cds;Parent=MsG0780039898.01.T01
Chr7 CDS 70243625 70243864 70243625 ID=MsG0780039898.01.T01:cds;Parent=MsG0780039898.01.T01
Chr7 CDS 70242581 70242802 70242581 ID=MsG0780039898.01.T01:cds;Parent=MsG0780039898.01.T01
Chr7 CDS 70242205 70242499 70242205 ID=MsG0780039898.01.T01:cds;Parent=MsG0780039898.01.T01
Chr7 CDS 70241793 70242118 70241793 ID=MsG0780039898.01.T01:cds;Parent=MsG0780039898.01.T01
Chr7 CDS 70241587 70241696 70241587 ID=MsG0780039898.01.T01:cds;Parent=MsG0780039898.01.T01
Chr7 CDS 70241396 70241499 70241396 ID=MsG0780039898.01.T01:cds;Parent=MsG0780039898.01.T01
Chr7 CDS 70241232 70241305 70241232 ID=MsG0780039898.01.T01:cds;Parent=MsG0780039898.01.T01
Chr7 CDS 70241038 70241139 70241038 ID=MsG0780039898.01.T01:cds;Parent=MsG0780039898.01.T01
Chr7 three_prime_UTR 70241037 70241037 70241037 ID=MsG0780039898.01.T01:three_prime_utr;Parent=MsG0780039898.01.T01
Chr7 three_prime_UTR 70240601 70240904 70240601 ID=MsG0780039898.01.T01:three_prime_utr;Parent=MsG0780039898.01.T01
Gene Sequence

>MsG0780039898.01.T01

ATGCCTCCGAAAGTGGTGAAAAGAGGTTCTGCGGCAAAGAAAGCGAAGGTTTCTTCAAAAGCCACAACTCAGAATCAACAGCAAGAACCTGAACCTGAACCTATCCAGAATCATGAAGATAATCATGTTGTTGATGCTGCGGTGGAGGAGAATTCAGCTGAAACAGTACCTAATGGTGTAGCTATGGTGGAAACAGACAATGTAGAGGAGGTTAAGGAGTCCACAGATGAATATGAAAAAGATGAACACTTAGATTTTGAGGATAATTATCAGGAGTATGATCCTGAGGAGTATGTTGGTGATGACTATGATGAGAGGGAAATTGAACAAGACGAGGGTCAGGAGGTCGAAGGGGAAGTGGAGGAAGAACCTGAAGAGAATGTGGATGACGAAGAGGGTGATACAGGTGATGAGGAAGTTGAAGAAGTTGAATATGTTTATGAAGAAGTCGAGGGTGATGATGATGATGTTGATGGTGATGTTGCTGGTGATGATGAGCATGCCAGTGAGGAGAACGTGCATGAGCATCTGGCTGATGTAAAGGAAGAGGAACAAGTTGAAGTTAGAAAGGAAACACAAAAGCAGAAGGAATTGGAAGTATTTGTTGGGGGCCTAAACAAGGATGCTACAGAGCATGATCTGAGGAAGGTTTTCAGTAAAGTTGGGGAGATTACTGAAGCCAGGACGACGTTGAATCCTCAGACTAAAAGGAACAAGGGATTTGCTTTATTGCGTTTCGAAACTGTTGAACAAGTGAAAAGAGCATTGACAGAACTAAAAAATCCAGTGATTAATGGCAAACAATGTGGTATCACCACATGTCAGGACAGTGATACTCTCTATTTAGATAACATTTGCAAGACATGGAAAAAGGAAGCTTTAAAGGAGAAATTGAAACATTATGGAGTTGAAAGTTTCAAGGATTTGACTATAGTAGAAGATGGTAACAATGAGGGAACGAACTGTGGATTTGCACTTTTAGTATTTTCGTCTCGTTCAGATGCTAAGGAAGCCTATAAGCGATTGCAGAAGACAGATGTTGTTTTTGGAGTTGATAAACCTGCCGAGGTTTCCTTTGCAAACTCCTTTATTGACCTGGGTGATGATATTATGGCACAGGTTAAAACAGTATTTATTGATTTACTGCCCCCTTCATGGGATGAAGATTATGTCCGAGCTCTTCTTAAGAAATATGGGGCGGTTGAAAAAGTTGAGCTTGCTAAGAACATGCCAGGTGCTCGCAGGAAGAATTATGGATTTGTTACGTTTGGTACGCATGCTGCTGCTGTGGAATGTGCTGAGAGCATTACCAGTGCAGGGTTAGGCGAAGGCAACAAAAAGGCAAAAGTTAGGGCTAGATTGTCGAGACCTCTTCCGAAAGTTCGTGGTAAACATGTTACTCACAGGGACATTTCTAGCCGCAAGATTGGAAGATTGGCAAGGCCTTCACGTGGTCGACCTGCACCACGTAGTCGACCTGCACCACAGAGTCGACCTGCTCATGTGTTCAGAAGACTTGGGAGTCGTGTTCCACCAGTTAGACCTTCTAGTGAGAGAAATAGACGTCCTGTTACGTCGATGCCTGTAAGAGCTAGGCCAGCCTCTCCTCCAACTAGATCCTACAGGAGATTAGCAGCTGCATATCCAAAAAGTAGCACGAAGAGAGATTATGGCCGACCTGTGGATCTGCCACCTCCAAGAAGTAGAGTTTCTACAGATTATGGCTCTCAGGTGGCCTCTCAAAGACGTCCATCTTATAGAGATTATCCAGCCCGTGACTCTGGCTACCCTGACCTGCATAGGGATACGTCTCGTACTGCACCAAGGAGGGGTCATCTGGATGATGGTTATGATCGAAGACTTGAAAGGCCTCCTTCTCCACCTCCCCGTCTAAGTTATCGCGAAGGACGCCCCCGCGATTATGACACATTATCTGGCTCGAAACGTCCTTATGCTGCCATAGATGATATTTCTCCACGGTATGCTGATGCTGGTGCTCGCCAATCAAGATCTCGTTTAGACTATGACTATGGAGGCAGTGGTTCCCGATATAGAGAGGCTTATGGTGATAGGCTTGAAAGATCTAGTCTAGGATATAGTGGCAGTAGAAGTTCTCTATCTATTCAAAACTCACATGGGGCGTATAGCAGTCGACAGGAACCGAGTTATGGCAGAGGCTCTCTTGGTGGTAGTGATGGGGGCATCTACTCATCAAGTTATGGTGGTGATTACTTATCTCGTGGAAGTGATGTTGGTGGCAGCTCATATTCGTCCATGTATTCTAGTAGGGGTATGAACGGTAGTAGCAGTTATATGAGTGGCAGCGGTGGTGGATCTAGATCTTATTATTGA
Protein sequence

>MsG0780039898.01.T01

MPPKVVKRGSAAKKAKVSSKATTQNQQQEPEPEPIQNHEDNHVVDAAVEENSAETVPNGVAMVETDNVEEVKESTDEYEKDEHLDFEDNYQEYDPEEYVGDDYDEREIEQDEGQEVEGEVEEEPEENVDDEEGDTGDEEVEEVEYVYEEVEGDDDDVDGDVAGDDEHASEENVHEHLADVKEEEQVEVRKETQKQKELEVFVGGLNKDATEHDLRKVFSKVGEITEARTTLNPQTKRNKGFALLRFETVEQVKRALTELKNPVINGKQCGITTCQDSDTLYLDNICKTWKKEALKEKLKHYGVESFKDLTIVEDGNNEGTNCGFALLVFSSRSDAKEAYKRLQKTDVVFGVDKPAEVSFANSFIDLGDDIMAQVKTVFIDLLPPSWDEDYVRALLKKYGAVEKVELAKNMPGARRKNYGFVTFGTHAAAVECAESITSAGLGEGNKKAKVRARLSRPLPKVRGKHVTHRDISSRKIGRLARPSRGRPAPRSRPAPQSRPAHVFRRLGSRVPPVRPSSERNRRPVTSMPVRARPASPPTRSYRRLAAAYPKSSTKRDYGRPVDLPPPRSRVSTDYGSQVASQRRPSYRDYPARDSGYPDLHRDTSRTAPRRGHLDDGYDRRLERPPSPPPRLSYREGRPRDYDTLSGSKRPYAAIDDISPRYADAGARQSRSRLDYDYGGSGSRYREAYGDRLERSSLGYSGSRSSLSIQNSHGAYSSRQEPSYGRGSLGGSDGGIYSSSYGGDYLSRGSDVGGSSYSSMYSSRGMNGSSSYMSGSGGGSRSYY*