AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780039951.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780039951.01.T01 MTR_7g082150 95.280 339 16 0 1 339 1 339 0.0 638
MsG0780039951.01.T01 MTR_7g082150 73.684 95 21 2 247 339 399 491 5.79e-27 111
MsG0780039951.01.T01 MTR_7g082150 63.208 106 27 1 246 339 348 453 1.91e-23 101
MsG0780039951.01.T01 MTR_7g082150 50.658 152 46 5 216 338 377 528 6.25e-22 97.1
MsG0780039951.01.T01 MTR_8g077840 40.426 141 81 1 40 177 112 252 1.58e-27 112
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780039951.01.T01 AT2G43370 56.034 348 107 6 1 338 1 312 2.83e-115 337
MsG0780039951.01.T01 AT2G43370 74.302 179 45 1 1 178 1 179 1.08e-88 265
MsG0780039951.01.T01 AT3G50670 39.098 133 81 0 41 173 116 248 1.65e-27 112
MsG0780039951.01.T01 AT3G46020 38.462 78 48 0 63 140 7 84 3.99e-11 59.7

Find 125 sgRNAs with CRISPR-Local

Find 309 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCACTCATTGTTAGGTTTC+TGG 0.073837 7:+71021609 None:intergenic
GCTCAACTTTGTTCCTCTAT+TGG 0.242180 7:-71021478 MsG0780039951.01.T01:CDS
GAGAGGTTGGTGTCTCTTCT+AGG 0.301147 7:+71018581 None:intergenic
TCGACCTTGCACTCATTGTT+AGG 0.306763 7:+71021602 None:intergenic
AGGTTCAATGATCATGGTTT+TGG 0.325668 7:-71017784 MsG0780039951.01.T01:three_prime_UTR
AGAGATGCGGCGAGCATATA+TGG 0.328276 7:-71020950 MsG0780039951.01.T01:intron
TCTCTGAAGAGCGCCTTTCA+TGG 0.334017 7:+71018045 None:intergenic
TGGTGGTCTTAGTGGTAATA+AGG 0.344991 7:-71020451 MsG0780039951.01.T01:CDS
TTCAACTCCTCATAAGGAAT+TGG 0.345170 7:+71019645 None:intergenic
ACGTGAATGTTTATCCGATT+TGG 0.347035 7:+71017963 None:intergenic
GAGAAAGACGACCCACAAAA+AGG 0.352911 7:+71021313 None:intergenic
TTTCAGGTTATGAGTGAGTT+TGG 0.353748 7:-71021183 MsG0780039951.01.T01:intron
GAATCAGGACAACTTCGTTT+TGG 0.362778 7:-71020429 MsG0780039951.01.T01:CDS
TACCTTTCGGATAGTTTCTT+CGG 0.370166 7:+71021281 None:intergenic
ATCAATGCTTCCAGCTTGAA+TGG 0.389433 7:+71021540 None:intergenic
ACTGAGAGAGAACTCGTAAT+AGG 0.392594 7:-71017993 MsG0780039951.01.T01:three_prime_UTR
ATTACAGGTGGTGGTCTTAG+TGG 0.393954 7:-71020459 MsG0780039951.01.T01:intron
GGATGGATTCCGAGAAGATT+AGG 0.402416 7:-71020558 MsG0780039951.01.T01:intron
ATTCAAGCTGGAAGCATTGA+TGG 0.406433 7:-71021538 MsG0780039951.01.T01:CDS
CTTAGTGGTAATAAGGAATC+AGG 0.408129 7:-71020444 MsG0780039951.01.T01:CDS
TTCAACTAACCTAATCTTCT+CGG 0.410057 7:+71020549 None:intergenic
TTCATCCTTGTCTGAGAGGT+TGG 0.422322 7:+71018568 None:intergenic
CTAACTACATCACACATGTT+TGG 0.425669 7:+71017717 None:intergenic
ATAGAAGAGGTTCTAGTGAT+AGG 0.427927 7:-71018538 MsG0780039951.01.T01:CDS
AATAGACAGCAGCTGATGCC+TGG 0.450039 7:-71020579 MsG0780039951.01.T01:CDS
CAGTCCTCTCCAACGAGCTT+CGG 0.454737 7:+71018402 None:intergenic
GTGGCCTTAGGATCCCCAAA+TGG 0.455314 7:+71021354 None:intergenic
TCTTAGCTGAGCTCCTCTCT+TGG 0.455530 7:+71018216 None:intergenic
ATGCATAGGTTCAATGATCA+TGG 0.458623 7:-71017790 MsG0780039951.01.T01:three_prime_UTR
TTTAGTCGGTATTCTCCTGC+TGG 0.459602 7:-71017898 MsG0780039951.01.T01:three_prime_UTR
GGTTATGAGTGAGTTTGGTC+AGG 0.461037 7:-71021178 MsG0780039951.01.T01:CDS
CAGGAAACCAATTCCTTATG+AGG 0.466270 7:-71019652 MsG0780039951.01.T01:CDS
CACAATCATCAACAATCAAA+TGG 0.467283 7:+71020619 None:intergenic
TAATAGGAGTTCAACCAAAT+CGG 0.468511 7:-71017977 MsG0780039951.01.T01:three_prime_UTR
GGAGTGGTCGTTACCAAGAC+AGG 0.471501 7:-71018022 MsG0780039951.01.T01:three_prime_UTR
AGCTTCTTCAACTCCTCATA+AGG 0.471870 7:+71019639 None:intergenic
TCCAGCTTGAATGGGATGAT+AGG 0.476066 7:+71021549 None:intergenic
ACATACAAGGGTGCACGAAA+TGG 0.476103 7:+71020393 None:intergenic
TAACTTCCCTCAGGTGGAGG+TGG 0.476740 7:+71019609 None:intergenic
GTGTCTCTTCTAGGAGGGGA+TGG 0.485999 7:+71018590 None:intergenic
ATCGTGATCGTTACCATGAC+AGG 0.486186 7:-71018301 MsG0780039951.01.T01:CDS
TAAGGGTCACCAGTGGCCTT+AGG 0.488679 7:+71021342 None:intergenic
TATGAGGAGTTGAAGAAGCT+TGG 0.496925 7:-71019636 MsG0780039951.01.T01:CDS
CTGCGCTTGGTGAGGGACAT+TGG 0.497884 7:-71021147 MsG0780039951.01.T01:intron
TCTCAGTTGAGCTCCTGTCT+TGG 0.502402 7:+71018009 None:intergenic
GGTATTCTCCTGCTGGACTA+AGG 0.503005 7:-71017891 MsG0780039951.01.T01:three_prime_UTR
ATCGTGACCGTTACCATGAC+AGG 0.504705 7:-71018379 MsG0780039951.01.T01:CDS
AGACGAATCCTCGCGTAGGC+GGG 0.507543 7:-71017926 MsG0780039951.01.T01:three_prime_UTR
ATCGTGATCATGACCGTGAC+AGG 0.507594 7:-71018093 MsG0780039951.01.T01:three_prime_UTR
ATCTTTCTGGATGGTCAGAA+AGG 0.509908 7:+71017838 None:intergenic
TTCTCAGCTAAGCTCTCTCT+TGG 0.517989 7:+71018121 None:intergenic
AATCTTCTCGGAATCCATCC+AGG 0.519552 7:+71020561 None:intergenic
GATGTAGTTAGACAAGTCAT+AGG 0.519811 7:-71017705 MsG0780039951.01.T01:three_prime_UTR
GTTGTAGACCTTAGTCCAGC+AGG 0.521121 7:+71017883 None:intergenic
GCCTATCATCCCATTCAAGC+TGG 0.524489 7:-71021550 MsG0780039951.01.T01:CDS
ATTATCGTGAGGAACAATAT+CGG 0.527899 7:+71021513 None:intergenic
TCAATGCTTCCAGCTTGAAT+GGG 0.532858 7:+71021541 None:intergenic
TGACCCATTTGGGGATCCTA+AGG 0.533640 7:-71021358 MsG0780039951.01.T01:CDS
CTCTGAAGAGCCTCCTGTCA+CGG 0.535567 7:+71018080 None:intergenic
CTCACGTGGAAGGAGTTCTT+CGG 0.536453 7:-71018447 MsG0780039951.01.T01:CDS
GAAGAACCTGCGCTTGGTGA+GGG 0.537398 7:-71021154 MsG0780039951.01.T01:CDS
CAACGTGAAATCTTTCTGGA+TGG 0.538886 7:+71017829 None:intergenic
GAGGAGTGACGTTCCATGAA+AGG 0.541372 7:-71018058 MsG0780039951.01.T01:three_prime_UTR
TGGCCTTAGGATCCCCAAAT+GGG 0.543200 7:+71021355 None:intergenic
GTTGGTGTCTCTTCTAGGAG+GGG 0.554266 7:+71018586 None:intergenic
GACAGCAGCTGATGCCTGGA+TGG 0.554918 7:-71020575 MsG0780039951.01.T01:CDS
TGGTCAGAAAGGCACAATAG+AGG 0.556225 7:+71017849 None:intergenic
GGTTGGTGTCTCTTCTAGGA+GGG 0.561884 7:+71018585 None:intergenic
AGTCTTCATCCTTGTCTGAG+AGG 0.563326 7:+71018564 None:intergenic
TTTGGGGATCCTAAGGCCAC+TGG 0.566483 7:-71021351 MsG0780039951.01.T01:CDS
GTTACCATGACAAGAGCAAT+CGG 0.567227 7:-71018160 MsG0780039951.01.T01:three_prime_UTR
TGAGAGGATCTCAGCTGAGA+AGG 0.567309 7:-71018327 MsG0780039951.01.T01:CDS
ATACTGACAGAGGCCAATAG+AGG 0.569152 7:+71021465 None:intergenic
ATGTAACTTCCCTCAGGTGG+AGG 0.570469 7:+71019606 None:intergenic
CTCTCCGATTGCTCTTGTCA+TGG 0.572147 7:+71018156 None:intergenic
AAGTGCTCTTGTCACGGTAA+CGG 0.575285 7:+71018258 None:intergenic
CAATGTCCCTCACCAAGCGC+AGG 0.576219 7:+71021148 None:intergenic
AATGATGACGGTAAATGCAT+AGG 0.578475 7:-71017804 MsG0780039951.01.T01:three_prime_UTR
TTCCACGTGAGTAGTCTCCT+CGG 0.579855 7:+71018459 None:intergenic
TGAAGAACCTGCGCTTGGTG+AGG 0.581773 7:-71021155 MsG0780039951.01.T01:CDS
TTGAATGGGATGATAGGCAT+TGG 0.581970 7:+71021555 None:intergenic
TTACCATGACCGAAGCTCGT+TGG 0.583517 7:-71018411 MsG0780039951.01.T01:CDS
CTTTCGGATAGTTTCTTCGG+TGG 0.585743 7:+71021284 None:intergenic
GATTGCTCTTGTCATGGTAA+CGG 0.586318 7:+71018162 None:intergenic
GCAGTGACTGGAGCTTCTCG+TGG 0.586600 7:-71021003 MsG0780039951.01.T01:intron
TCTCCAACGAGCTTCGGTCA+TGG 0.594037 7:+71018408 None:intergenic
ATGTAGTTAGACAAGTCATA+GGG 0.594725 7:-71017704 MsG0780039951.01.T01:three_prime_UTR
AGGTTGGTGTCTCTTCTAGG+AGG 0.596993 7:+71018584 None:intergenic
CTGAGATCCTCTCATGGTAA+CGG 0.599329 7:+71018336 None:intergenic
GCTTTGCATAATATAGCTCA+CGG 0.601207 7:+71017643 None:intergenic
GAGACGAATCCTCGCGTAGG+CGG 0.602294 7:-71017927 MsG0780039951.01.T01:three_prime_UTR
CGTGACATGTAACTTCCCTC+AGG 0.604953 7:+71019600 None:intergenic
TGGTATCCCACCTCCACCTG+AGG 0.605554 7:-71019616 MsG0780039951.01.T01:CDS
AACTTCCCTCAGGTGGAGGT+GGG 0.606737 7:+71019610 None:intergenic
AAGAGCTCCTGTCATGGTAA+CGG 0.606973 7:+71018372 None:intergenic
TTTCACGTTGAAAATGATGA+CGG 0.615575 7:-71017816 MsG0780039951.01.T01:three_prime_UTR
TCTCTGAAGTGCTCTTGTCA+CGG 0.617129 7:+71018252 None:intergenic
GAGGAGACTACTCACGTGGA+AGG 0.617471 7:-71018457 MsG0780039951.01.T01:CDS
CACCGAAGAAACTATCCGAA+AGG 0.622839 7:-71021283 MsG0780039951.01.T01:intron
GGAGTGATCGTTACCAAGAG+AGG 0.623111 7:-71018229 MsG0780039951.01.T01:CDS
GATGAAGACTCTGATAGAAG+AGG 0.624106 7:-71018551 MsG0780039951.01.T01:CDS
CACCGAGGAGACTACTCACG+TGG 0.634477 7:-71018461 MsG0780039951.01.T01:CDS
GGAGTGACCGTTACCATGAG+AGG 0.634629 7:-71018343 MsG0780039951.01.T01:CDS
TCTCTGAAGAGCTCCTGTCA+TGG 0.634844 7:+71018288 None:intergenic
TCTCTGAAGAGCTCCTGTCA+TGG 0.634844 7:+71018366 None:intergenic
GAAACCTAACAATGAGTGCA+AGG 0.635266 7:-71021606 MsG0780039951.01.T01:exon
GGTATCCCACCTCCACCTGA+GGG 0.636646 7:-71019615 MsG0780039951.01.T01:CDS
ATGACCGAAGCTCGTTGGAG+AGG 0.640513 7:-71018406 MsG0780039951.01.T01:CDS
TCAGGTGAAGAACCTGCGCT+TGG 0.646184 7:-71021160 MsG0780039951.01.T01:CDS
TCTCAGCTGAGATCCTCTCA+TGG 0.646188 7:+71018330 None:intergenic
AGACACCAACCTCTCAGACA+AGG 0.651418 7:-71018573 MsG0780039951.01.T01:CDS
GACATGTAACTTCCCTCAGG+TGG 0.657159 7:+71019603 None:intergenic
AAAGAGACGAATCCTCGCGT+AGG 0.659264 7:-71017930 MsG0780039951.01.T01:three_prime_UTR
GTGATCATGACCGTGACAGG+AGG 0.660210 7:-71018090 MsG0780039951.01.T01:three_prime_UTR
TGACAGGAGGCTCTTCAGAG+AGG 0.668459 7:-71018077 MsG0780039951.01.T01:three_prime_UTR
TTGAAACTGAAAGAGAGATG+CGG 0.676172 7:-71020963 MsG0780039951.01.T01:CDS
AGGCGCTCTTCAGAGAGGAG+TGG 0.681355 7:-71018038 MsG0780039951.01.T01:three_prime_UTR
ATGACAGGAGCTCTTCAGAG+AGG 0.690910 7:-71018364 MsG0780039951.01.T01:CDS
ATGAAAGGCGCTCTTCAGAG+AGG 0.697561 7:-71018043 MsG0780039951.01.T01:three_prime_UTR
GTGGAAGGAGTTCTTCGGAG+AGG 0.711247 7:-71018442 MsG0780039951.01.T01:CDS
GCTCAGCTAAGAAAGCATGA+CGG 0.711997 7:-71018205 MsG0780039951.01.T01:exon
GTGACAAGAGCACTTCAGAG+AGG 0.726230 7:-71018250 MsG0780039951.01.T01:CDS
GGTACAATAAGGGTCACCAG+TGG 0.733283 7:+71021335 None:intergenic
CATGACAAGAGCAATCGGAG+AGG 0.733640 7:-71018155 MsG0780039951.01.T01:three_prime_UTR
AAAATGAGTTCAAGTCACCG+AGG 0.760990 7:-71018476 MsG0780039951.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TGTTAAAAAAAAAAAGTATT+AGG - Chr7:71020171-71020190 MsG0780039951.01.T01:intron 10.0%
!! AATTGAAAGAAAAAAGAAAA+TGG + Chr7:71017837-71017856 None:intergenic 15.0%
!! ATCGGATAAATAATAAATAA+GGG + Chr7:71018935-71018954 None:intergenic 15.0%
!! ATGTTCTTTAGTTAATTTAA+TGG + Chr7:71019879-71019898 None:intergenic 15.0%
!! TATCGGATAAATAATAAATA+AGG + Chr7:71018936-71018955 None:intergenic 15.0%
!!! TTAAAAAGGTATATATTACA+AGG + Chr7:71018560-71018579 None:intergenic 15.0%
!! ATAACAATTCTTTATTGAAG+AGG - Chr7:71019224-71019243 MsG0780039951.01.T01:intron 20.0%
!!! AATTTTTTCATACATTGTAC+AGG - Chr7:71020638-71020657 MsG0780039951.01.T01:intron 20.0%
!!! ATATAAACCATTTTTTCAAC+AGG + Chr7:71019105-71019124 None:intergenic 20.0%
!!! ATCAGAAGTCTTTAAAAATT+AGG + Chr7:71018960-71018979 None:intergenic 20.0%
!!! GTAACTATATTTTGAATTGT+CGG - Chr7:71021584-71021603 MsG0780039951.01.T01:CDS 20.0%
!!! TAACTATATTTTGAATTGTC+GGG - Chr7:71021585-71021604 MsG0780039951.01.T01:CDS 20.0%
!!! TATATACCTTTTTAATGAGA+TGG - Chr7:71018565-71018584 MsG0780039951.01.T01:CDS 20.0%
! AAAATACATTCCGAATACTT+TGG + Chr7:71020152-71020171 None:intergenic 25.0%
! AAACTGACATATAAAATCTG+AGG - Chr7:71020387-71020406 MsG0780039951.01.T01:intron 25.0%
! AATAGTGACTGAAATGTAAA+AGG - Chr7:71019047-71019066 MsG0780039951.01.T01:intron 25.0%
! AATTGTAAATTCCAATATCC+TGG + Chr7:71020594-71020613 None:intergenic 25.0%
! ATAGAATATAATACTGACAG+AGG + Chr7:71017801-71017820 None:intergenic 25.0%
! ATAGTGACTGAAATGTAAAA+GGG - Chr7:71019048-71019067 MsG0780039951.01.T01:intron 25.0%
! ATATTGTCTAACATTGTTAG+CGG - Chr7:71019773-71019792 MsG0780039951.01.T01:intron 25.0%
! ATCTGAATGATATAGATGAT+CGG + Chr7:71018438-71018457 None:intergenic 25.0%
! ATGAAATAAATGCTAAGCTT+TGG + Chr7:71020263-71020282 None:intergenic 25.0%
! ATGTTCTTTAGTAAATCTGA+TGG - Chr7:71020500-71020519 MsG0780039951.01.T01:intron 25.0%
! ATTTATTTATTTGCAGTGAC+TGG - Chr7:71018238-71018257 MsG0780039951.01.T01:CDS 25.0%
! CAATTCATTATAGATCAACT+AGG + Chr7:71019024-71019043 None:intergenic 25.0%
! CTAGTTGATCTATAATGAAT+TGG - Chr7:71019022-71019041 MsG0780039951.01.T01:intron 25.0%
! GGAAGAAAAATATTACCTTT+CGG + Chr7:71017988-71018007 None:intergenic 25.0%
! TGAAATAAATGCTAAGCTTT+GGG + Chr7:71020262-71020281 None:intergenic 25.0%
!! ACATCTTTAAATCTTTTCCA+TGG + Chr7:71020365-71020384 None:intergenic 25.0%
!! ATTCTTTATTGAAGAGGTTT+TGG - Chr7:71019230-71019249 MsG0780039951.01.T01:intron 25.0%
!! ATTTTCTCTACTATTTAACC+AGG - Chr7:71019582-71019601 MsG0780039951.01.T01:intron 25.0%
!! CTATCTTAATTTTGTGTGTT+TGG - Chr7:71018143-71018162 MsG0780039951.01.T01:three_prime_UTR 25.0%
!! GTCTTTAAAAATTAGGCTAT+CGG + Chr7:71018953-71018972 None:intergenic 25.0%
!! TTTGAAATTGATTGTTGACA+TGG - Chr7:71019365-71019384 MsG0780039951.01.T01:intron 25.0%
!!! AAAAAGTATTAGGAATGCAT+TGG - Chr7:71020181-71020200 MsG0780039951.01.T01:intron 25.0%
!!! AACCTTTTTCAGAGTTTAAA+GGG + Chr7:71019454-71019473 None:intergenic 25.0%
!!! ATGTGTTTTTATCATTCTGT+GGG - Chr7:71018196-71018215 MsG0780039951.01.T01:exon 25.0%
!!! GTTATACGCATAAGTTTTTT+TGG + Chr7:71019209-71019228 None:intergenic 25.0%
!!! TAACCTTTTTCAGAGTTTAA+AGG + Chr7:71019455-71019474 None:intergenic 25.0%
!!! TATGTGTTTTTATCATTCTG+TGG - Chr7:71018195-71018214 MsG0780039951.01.T01:exon 25.0%
AACTACAACATGTGTATTGA+AGG - Chr7:71019125-71019144 MsG0780039951.01.T01:intron 30.0%
AAGTAGAATTGTATGCTTGT+TGG + Chr7:71018408-71018427 None:intergenic 30.0%
ACGTTACCATCTCATTAAAA+AGG + Chr7:71018574-71018593 None:intergenic 30.0%
ATAAGGGAAGCTATAGAAAT+AGG + Chr7:71018919-71018938 None:intergenic 30.0%
ATAGAAAACAGAAGCTAATC+AGG + Chr7:71018776-71018795 None:intergenic 30.0%
ATGTAGTTAGACAAGTCATA+GGG - Chr7:71021549-71021568 MsG0780039951.01.T01:CDS 30.0%
ATTATCGTGAGGAACAATAT+CGG + Chr7:71017743-71017762 None:intergenic 30.0%
ATTTGAACTTGAACTCCAAA+GGG + Chr7:71018009-71018028 None:intergenic 30.0%
CACAATCATCAACAATCAAA+TGG + Chr7:71018637-71018656 None:intergenic 30.0%
CACATTTCTACATCATTCAT+TGG - Chr7:71020023-71020042 MsG0780039951.01.T01:intron 30.0%
CATATAAAATCTGAGGAAGA+AGG - Chr7:71020394-71020413 MsG0780039951.01.T01:intron 30.0%
CATGACAAAAAAGACTAAGA+TGG - Chr7:71020740-71020759 MsG0780039951.01.T01:intron 30.0%
GAAATGACCTGTTGAAAAAA+TGG - Chr7:71019095-71019114 MsG0780039951.01.T01:intron 30.0%
GATGATTTGATGTCTCAATA+TGG - Chr7:71019162-71019181 MsG0780039951.01.T01:intron 30.0%
TAAGGGAAGCTATAGAAATA+GGG + Chr7:71018918-71018937 None:intergenic 30.0%
TAATAGGAGTTCAACCAAAT+CGG - Chr7:71021276-71021295 MsG0780039951.01.T01:intron 30.0%
TATCGAACTTTATCATTTGC+AGG - Chr7:71018604-71018623 MsG0780039951.01.T01:intron 30.0%
TATTTGAACTTGAACTCCAA+AGG + Chr7:71018010-71018029 None:intergenic 30.0%
TCCAAATGAATTTATAGCCA+CGG - Chr7:71018516-71018535 MsG0780039951.01.T01:CDS 30.0%
TTCAACTAACCTAATCTTCT+CGG + Chr7:71018707-71018726 None:intergenic 30.0%
TTTCACGTTGAAAATGATGA+CGG - Chr7:71021437-71021456 MsG0780039951.01.T01:intron 30.0%
! AATTTTGTAGATGACCCATT+TGG - Chr7:71017884-71017903 MsG0780039951.01.T01:three_prime_UTR 30.0%
! ATTTTGTAGATGACCCATTT+GGG - Chr7:71017885-71017904 MsG0780039951.01.T01:three_prime_UTR 30.0%
! GGTAATATTTTTCTTCCCTT+TGG - Chr7:71017991-71018010 MsG0780039951.01.T01:three_prime_UTR 30.0%
! TAGCTTCTGTTTTCTATTAC+AGG - Chr7:71018779-71018798 MsG0780039951.01.T01:intron 30.0%
! TCTTTAAATCTTTTCCATGG+TGG + Chr7:71020362-71020381 None:intergenic 30.0%
! TTGAGTTTGACCAAAGTATT+CGG - Chr7:71020139-71020158 MsG0780039951.01.T01:intron 30.0%
! TTTTCAACGTGAAATCTTTC+TGG + Chr7:71021431-71021450 None:intergenic 30.0%
! TTTTGTCAAAAGTGAAGTTG+CGG + Chr7:71018496-71018515 None:intergenic 30.0%
!! AAAATTAGCTTTCCCATGAT+GGG + Chr7:71019854-71019873 None:intergenic 30.0%
!! AAGCGGGTTAATGTAAATAT+GGG - Chr7:71020054-71020073 MsG0780039951.01.T01:intron 30.0%
!! TAAGCGGGTTAATGTAAATA+TGG - Chr7:71020053-71020072 MsG0780039951.01.T01:intron 30.0%
!! TACAGAGTGTTACAGTTTTA+CGG - Chr7:71019544-71019563 MsG0780039951.01.T01:intron 30.0%
!! TGTGTAGGTTTTATCTTTTC+AGG - Chr7:71018054-71018073 MsG0780039951.01.T01:three_prime_UTR 30.0%
!!! AGAGAAAAATTTTGGTGTTG+AGG + Chr7:71019917-71019936 None:intergenic 30.0%
!!! AGGTTTTGGAAAGGATTTAA+AGG - Chr7:71019244-71019263 MsG0780039951.01.T01:intron 30.0%
!!! ATTCATTGGTTTTGCTTAAG+CGG - Chr7:71020037-71020056 MsG0780039951.01.T01:intron 30.0%
!!! GAGAAAAATTTTGGTGTTGA+GGG + Chr7:71019916-71019935 None:intergenic 30.0%
!!! GGTTTTGGTTATATTTAGTG+CGG - Chr7:71021484-71021503 MsG0780039951.01.T01:CDS 30.0%
!!! TTATTGAAGAGGTTTTGGAA+AGG - Chr7:71019235-71019254 MsG0780039951.01.T01:intron 30.0%
!!! TTTTCCTTTTGACTTTAAGC+AGG - Chr7:71019693-71019712 MsG0780039951.01.T01:intron 30.0%
AAATGTGTGATTCAAGCTCT+TGG + Chr7:71020010-71020029 None:intergenic 35.0%
AACACCTGCTTAAAGTCAAA+AGG + Chr7:71019700-71019719 None:intergenic 35.0%
AAGGGAAGCTATAGAAATAG+GGG + Chr7:71018917-71018936 None:intergenic 35.0%
ACAAAGTTGAGCACGAAAAA+TGG + Chr7:71017767-71017786 None:intergenic 35.0%
ACGTGAATGTTTATCCGATT+TGG + Chr7:71021293-71021312 None:intergenic 35.0%
ATGCATAGGTTCAATGATCA+TGG - Chr7:71021463-71021482 MsG0780039951.01.T01:intron 35.0%
ATTGTAGCCTTTGCAAGAAA+TGG - Chr7:71019489-71019508 MsG0780039951.01.T01:intron 35.0%
CCAAATGAATTTATAGCCAC+GGG - Chr7:71018517-71018536 MsG0780039951.01.T01:CDS 35.0%
CTAACTACATCACACATGTT+TGG + Chr7:71021539-71021558 None:intergenic 35.0%
CTCTCATATTTGTGATGTGT+AGG - Chr7:71018039-71018058 MsG0780039951.01.T01:three_prime_UTR 35.0%
CTTAGTGGTAATAAGGAATC+AGG - Chr7:71018809-71018828 MsG0780039951.01.T01:intron 35.0%
GAACTTGTAATAAACACAGC+TGG + Chr7:71019966-71019985 None:intergenic 35.0%
GACAAAAAAGACTAAGATGG+AGG - Chr7:71020743-71020762 MsG0780039951.01.T01:intron 35.0%
GAGAGAAAGGAAACATACAA+GGG + Chr7:71018875-71018894 None:intergenic 35.0%
GATGTAGTTAGACAAGTCAT+AGG - Chr7:71021548-71021567 MsG0780039951.01.T01:CDS 35.0%
GATTTGATGTCTCAATATGG+TGG - Chr7:71019165-71019184 MsG0780039951.01.T01:intron 35.0%
GCTTTGCATAATATAGCTCA+CGG + Chr7:71021613-71021632 None:intergenic 35.0%
GGGTTAATGTAAATATGGGT+CGG - Chr7:71020058-71020077 MsG0780039951.01.T01:intron 35.0%
GGTTAATGTAAATATGGGTC+GGG - Chr7:71020059-71020078 MsG0780039951.01.T01:intron 35.0%
TACCTTTCGGATAGTTTCTT+CGG + Chr7:71017975-71017994 None:intergenic 35.0%
TAGTTGCATGTATGAGAGAA+AGG + Chr7:71018888-71018907 None:intergenic 35.0%
TCCATGACTCACAAATCAAA+TGG + Chr7:71019522-71019541 None:intergenic 35.0%
TGAGACATCAAATCATCCTA+GGG + Chr7:71019159-71019178 None:intergenic 35.0%
TGAGAGAAAGGAAACATACA+AGG + Chr7:71018876-71018895 None:intergenic 35.0%
TGATTGTTGACATGGAAGAA+TGG - Chr7:71019373-71019392 MsG0780039951.01.T01:intron 35.0%
TGTGTTGAAGAGGTGATTTA+TGG - Chr7:71020097-71020116 MsG0780039951.01.T01:intron 35.0%
TTCAACTCCTCATAAGGAAT+TGG + Chr7:71019611-71019630 None:intergenic 35.0%
TTCGAATTTACCACACTAGA+GGG + Chr7:71018984-71019003 None:intergenic 35.0%
TTGAAACTGAAAGAGAGATG+CGG - Chr7:71018290-71018309 MsG0780039951.01.T01:CDS 35.0%
TTGAGACATCAAATCATCCT+AGG + Chr7:71019160-71019179 None:intergenic 35.0%
TTTCGAATTTACCACACTAG+AGG + Chr7:71018985-71019004 None:intergenic 35.0%
! AAGTTACATGTCACGTTTTC+AGG - Chr7:71019661-71019680 MsG0780039951.01.T01:intron 35.0%
! AGATATGCCATTTCTTGCAA+AGG + Chr7:71019499-71019518 None:intergenic 35.0%
! AGGTTCAATGATCATGGTTT+TGG - Chr7:71021469-71021488 MsG0780039951.01.T01:intron 35.0%
! ATAGAAGAGGTTCTAGTGAT+AGG - Chr7:71020715-71020734 MsG0780039951.01.T01:intron 35.0%
! ATCTGAGGAAGAAGGTATAA+TGG - Chr7:71020402-71020421 MsG0780039951.01.T01:CDS 35.0%
! CAATATCCTGGTCTAAAACA+CGG + Chr7:71020582-71020601 None:intergenic 35.0%
! CACCCTTTAAACTCTGAAAA+AGG - Chr7:71019449-71019468 MsG0780039951.01.T01:intron 35.0%
! CCACAAAAAGGGTACAATAA+GGG + Chr7:71017931-71017950 None:intergenic 35.0%
! CCTTATTGTACCCTTTTTGT+GGG - Chr7:71017929-71017948 MsG0780039951.01.T01:three_prime_UTR 35.0%
! CTTCTGTTTTCTATTACAGG+TGG - Chr7:71018782-71018801 MsG0780039951.01.T01:intron 35.0%
! TGAAGGGGAGAGAAAAATTT+TGG + Chr7:71019925-71019944 None:intergenic 35.0%
! TTTAGGGTGGCATTTAGTAT+GGG - Chr7:71019813-71019832 MsG0780039951.01.T01:intron 35.0%
! TTTTGTAGATGACCCATTTG+GGG - Chr7:71017886-71017905 MsG0780039951.01.T01:three_prime_UTR 35.0%
!! AAAATTAGCTTTCCCATGGT+GGG - Chr7:71020525-71020544 MsG0780039951.01.T01:intron 35.0%
!! AATGATGACGGTAAATGCAT+AGG - Chr7:71021449-71021468 MsG0780039951.01.T01:intron 35.0%
!! CAAAATTAGCTTTCCCATGA+TGG + Chr7:71019855-71019874 None:intergenic 35.0%
!! TCCATTTGATTTGTGAGTCA+TGG - Chr7:71019518-71019537 MsG0780039951.01.T01:intron 35.0%
!! TTTCAGGTTATGAGTGAGTT+TGG - Chr7:71018070-71018089 MsG0780039951.01.T01:three_prime_UTR 35.0%
!!! TTCATTGGTTTTGCTTAAGC+GGG - Chr7:71020038-71020057 MsG0780039951.01.T01:intron 35.0%
!!! TTTTAGGGTGGCATTTAGTA+TGG - Chr7:71019812-71019831 MsG0780039951.01.T01:intron 35.0%
AAAATGAGTTCAAGTCACCG+AGG - Chr7:71020777-71020796 MsG0780039951.01.T01:intron 40.0%
ACTGAGAGAGAACTCGTAAT+AGG - Chr7:71021260-71021279 MsG0780039951.01.T01:intron 40.0%
AGAAAGACGACCCACAAAAA+GGG + Chr7:71017942-71017961 None:intergenic 40.0%
AGCTTCTTCAACTCCTCATA+AGG + Chr7:71019617-71019636 None:intergenic 40.0%
AGGGAAGCTATAGAAATAGG+GGG + Chr7:71018916-71018935 None:intergenic 40.0%
ATCAATGCTTCCAGCTTGAA+TGG + Chr7:71017716-71017735 None:intergenic 40.0%
ATCTTTCTGGATGGTCAGAA+AGG + Chr7:71021418-71021437 None:intergenic 40.0%
ATGGTAGTCTAGTCTCTCAT+TGG - Chr7:71019392-71019411 MsG0780039951.01.T01:intron 40.0%
CAACGTGAAATCTTTCTGGA+TGG + Chr7:71021427-71021446 None:intergenic 40.0%
CACATCACTCAACTCTTGTA+TGG - Chr7:71019338-71019357 MsG0780039951.01.T01:intron 40.0%
CAGGAAACCAATTCCTTATG+AGG - Chr7:71019601-71019620 MsG0780039951.01.T01:CDS 40.0%
CATACAAGAGTTGAGTGATG+TGG + Chr7:71019340-71019359 None:intergenic 40.0%
CCCGTGGCTATAAATTCATT+TGG + Chr7:71018520-71018539 None:intergenic 40.0%
CGAAAAATGGCATTATCGTG+AGG + Chr7:71017754-71017773 None:intergenic 40.0%
CTTGTAATAAACACAGCTGG+TGG + Chr7:71019963-71019982 None:intergenic 40.0%
GAAACCTAACAATGAGTGCA+AGG - Chr7:71017647-71017666 MsG0780039951.01.T01:three_prime_UTR 40.0%
GATGAAGACTCTGATAGAAG+AGG - Chr7:71020702-71020721 MsG0780039951.01.T01:intron 40.0%
GATTGCTCTTGTCATGGTAA+CGG + Chr7:71021094-71021113 None:intergenic 40.0%
GCTCAACTTTGTTCCTCTAT+TGG - Chr7:71017775-71017794 MsG0780039951.01.T01:three_prime_UTR 40.0%
GTAGGCGGGAAAAATTTAGT+CGG - Chr7:71021341-71021360 MsG0780039951.01.T01:CDS 40.0%
GTGGCATTTAGTATGGGAAA+GGG - Chr7:71019819-71019838 MsG0780039951.01.T01:intron 40.0%
GTTACCATGACAAGAGCAAT+CGG - Chr7:71021093-71021112 MsG0780039951.01.T01:intron 40.0%
TATGAGGAGTTGAAGAAGCT+TGG - Chr7:71019617-71019636 MsG0780039951.01.T01:CDS 40.0%
TCAATGCTTCCAGCTTGAAT+GGG + Chr7:71017715-71017734 None:intergenic 40.0%
TGCACTCATTGTTAGGTTTC+TGG + Chr7:71017647-71017666 None:intergenic 40.0%
TGTAAATATGGGTCGGGTTA+TGG - Chr7:71020065-71020084 MsG0780039951.01.T01:intron 40.0%
TGTCTAACATTGTTAGCGGT+TGG - Chr7:71019777-71019796 MsG0780039951.01.T01:intron 40.0%
TGTGATTCAAGCTCTTGGAA+GGG + Chr7:71020005-71020024 None:intergenic 40.0%
TTGAATGGGATGATAGGCAT+TGG + Chr7:71017701-71017720 None:intergenic 40.0%
! AATCGTGGATTTTCACTGGA+CGG + Chr7:71019314-71019333 None:intergenic 40.0%
! CCCACAAAAAGGGTACAATA+AGG + Chr7:71017932-71017951 None:intergenic 40.0%
! CCCTTATTGTACCCTTTTTG+TGG - Chr7:71017928-71017947 MsG0780039951.01.T01:three_prime_UTR 40.0%
! CTCATAAGGAATTGGTTTCC+TGG + Chr7:71019603-71019622 None:intergenic 40.0%
! CTGTTTTCTATTACAGGTGG+TGG - Chr7:71018785-71018804 MsG0780039951.01.T01:intron 40.0%
! GAAGAAGGTATAATGGTGGT+GGG - Chr7:71020409-71020428 MsG0780039951.01.T01:CDS 40.0%
! GAATCAGGACAACTTCGTTT+TGG - Chr7:71018824-71018843 MsG0780039951.01.T01:intron 40.0%
! GCAAAATCGTGGATTTTCAC+TGG + Chr7:71019318-71019337 None:intergenic 40.0%
! TGAGGAAGAAGGTATAATGG+TGG - Chr7:71020405-71020424 MsG0780039951.01.T01:CDS 40.0%
! TGGTGGTCTTAGTGGTAATA+AGG - Chr7:71018802-71018821 MsG0780039951.01.T01:intron 40.0%
! TTACAAGTTCTGACCAACCA+TGG - Chr7:71019976-71019995 MsG0780039951.01.T01:intron 40.0%
! TTTTGCTCTGTACATGAACC+TGG - Chr7:71020223-71020242 MsG0780039951.01.T01:intron 40.0%
!! AAGATGAATTGATTTGCCCG+TGG + Chr7:71018536-71018555 None:intergenic 40.0%
!! ACATTGTTAGCGGTTGGTAA+TGG - Chr7:71019783-71019802 MsG0780039951.01.T01:intron 40.0%
!! ATGGTTGGATTTGGTGTTGA+TGG - Chr7:71020463-71020482 MsG0780039951.01.T01:intron 40.0%
!! ATTCAAGCTGGAAGCATTGA+TGG - Chr7:71017715-71017734 MsG0780039951.01.T01:three_prime_UTR 40.0%
!! CAAAATTAGCTTTCCCATGG+TGG - Chr7:71020524-71020543 MsG0780039951.01.T01:intron 40.0%
!! CGTGTTTTAGACCAGGATAT+TGG - Chr7:71020580-71020599 MsG0780039951.01.T01:CDS 40.0%
!! GGTCAAAATTAGCTTTCCCA+TGG - Chr7:71020521-71020540 MsG0780039951.01.T01:intron 40.0%
!! TTGGGTGACATAGTTTTACC+AGG + Chr7:71020244-71020263 None:intergenic 40.0%
!!! TGGTAATGGCACGTGTTTTA+GGG - Chr7:71019797-71019816 MsG0780039951.01.T01:intron 40.0%
!!! TTGGTAATGGCACGTGTTTT+AGG - Chr7:71019796-71019815 MsG0780039951.01.T01:intron 40.0%
AAACACGGTGGCATTTAGCA+TGG + Chr7:71020567-71020586 None:intergenic 45.0%
AACACGGTGGCATTTAGCAT+GGG + Chr7:71020566-71020585 None:intergenic 45.0%
AAGAGCTCCTGTCATGGTAA+CGG + Chr7:71020884-71020903 None:intergenic 45.0%
AAGTGCTCTTGTCACGGTAA+CGG + Chr7:71020998-71021017 None:intergenic 45.0%
AATCTTCTCGGAATCCATCC+AGG + Chr7:71018695-71018714 None:intergenic 45.0%
AGAAGCTAATCAGGTGACTC+AGG + Chr7:71018767-71018786 None:intergenic 45.0%
AGGAGGAAGATGAGATGTAG+AGG - Chr7:71020436-71020455 MsG0780039951.01.T01:CDS 45.0%
AGGGAAAGAGTTTCCCATCA+TGG - Chr7:71019838-71019857 MsG0780039951.01.T01:intron 45.0%
AGGTTAAGAGTTTCCCACCA+TGG + Chr7:71020541-71020560 None:intergenic 45.0%
AGTCTTCATCCTTGTCTGAG+AGG + Chr7:71020692-71020711 None:intergenic 45.0%
ATACTGACAGAGGCCAATAG+AGG + Chr7:71017791-71017810 None:intergenic 45.0%
ATCGTGATCGTTACCATGAC+AGG - Chr7:71020952-71020971 MsG0780039951.01.T01:CDS 45.0%
ATTGAAGGTTACAGTGCCCT+AGG - Chr7:71019140-71019159 MsG0780039951.01.T01:intron 45.0%
CACCGAAGAAACTATCCGAA+AGG - Chr7:71017970-71017989 MsG0780039951.01.T01:three_prime_UTR 45.0%
CTGAGATCCTCTCATGGTAA+CGG + Chr7:71020920-71020939 None:intergenic 45.0%
CTTTCGGATAGTTTCTTCGG+TGG + Chr7:71017972-71017991 None:intergenic 45.0%
GAGAAAGACGACCCACAAAA+AGG + Chr7:71017943-71017962 None:intergenic 45.0%
GAGATGAAGTGATTCCACCA+TGG - Chr7:71020345-71020364 MsG0780039951.01.T01:intron 45.0%
GAGTTGGGTTTGTGTTGAAG+AGG - Chr7:71020087-71020106 MsG0780039951.01.T01:intron 45.0%
GGAGGAAGATGAGATGTAGA+GGG - Chr7:71020437-71020456 MsG0780039951.01.T01:CDS 45.0%
GGGAAAGAGTTTCCCATCAT+GGG - Chr7:71019839-71019858 MsG0780039951.01.T01:intron 45.0%
GGTGGCATTTAGTATGGGAA+AGG - Chr7:71019818-71019837 MsG0780039951.01.T01:intron 45.0%
GGTTAAGAGTTTCCCACCAT+GGG + Chr7:71020540-71020559 None:intergenic 45.0%
GGTTATGAGTGAGTTTGGTC+AGG - Chr7:71018075-71018094 MsG0780039951.01.T01:three_prime_UTR 45.0%
GTAATAAACACAGCTGGTGG+TGG + Chr7:71019960-71019979 None:intergenic 45.0%
GTGGTTGGATGAGTCATGAA+GGG + Chr7:71019941-71019960 None:intergenic 45.0%
GTGTGATTCAAGCTCTTGGA+AGG + Chr7:71020006-71020025 None:intergenic 45.0%
TCCAGCTTGAATGGGATGAT+AGG + Chr7:71017707-71017726 None:intergenic 45.0%
TCGACCTTGCACTCATTGTT+AGG + Chr7:71017654-71017673 None:intergenic 45.0%
TGAGTGATGTGGCAAAATCG+TGG + Chr7:71019329-71019348 None:intergenic 45.0%
TGGTTGGATGAGTCATGAAG+GGG + Chr7:71019940-71019959 None:intergenic 45.0%
TTCATCCTTGTCTGAGAGGT+TGG + Chr7:71020688-71020707 None:intergenic 45.0%
TTCTCAGCTAAGCTCTCTCT+TGG + Chr7:71021135-71021154 None:intergenic 45.0%
TTTAGTCGGTATTCTCCTGC+TGG - Chr7:71021355-71021374 MsG0780039951.01.T01:CDS 45.0%
! ACATACAAGGGTGCACGAAA+TGG + Chr7:71018863-71018882 None:intergenic 45.0%
! ATTACAGGTGGTGGTCTTAG+TGG - Chr7:71018794-71018813 MsG0780039951.01.T01:intron 45.0%
! GCTCAGCTAAGAAAGCATGA+CGG - Chr7:71021048-71021067 MsG0780039951.01.T01:intron 45.0%
! GGAAGAAGGTATAATGGTGG+TGG - Chr7:71020408-71020427 MsG0780039951.01.T01:CDS 45.0%
! GGATGGATTCCGAGAAGATT+AGG - Chr7:71018695-71018714 MsG0780039951.01.T01:intron 45.0%
! TATCCTGGTCTAAAACACGG+TGG + Chr7:71020579-71020598 None:intergenic 45.0%
! TCAGGACAACTTCGTTTTGG+TGG - Chr7:71018827-71018846 MsG0780039951.01.T01:intron 45.0%
! TGGTCAGAAAGGCACAATAG+AGG + Chr7:71021407-71021426 None:intergenic 45.0%
!! TCTCTGAAGTGCTCTTGTCA+CGG + Chr7:71021004-71021023 None:intergenic 45.0%
!!! TAATGGCACGTGTTTTAGGG+TGG - Chr7:71019800-71019819 MsG0780039951.01.T01:intron 45.0%
!!! TAAATTTTAGAAATTAAAAA+TGG + Chr7:71017865-71017884 None:intergenic 5.0%
AAAGAGACGAATCCTCGCGT+AGG - Chr7:71021323-71021342 MsG0780039951.01.T01:CDS 50.0%
AATAGACAGCAGCTGATGCC+TGG - Chr7:71018674-71018693 MsG0780039951.01.T01:intron 50.0%
ACTTCTGATGCCCTCTAGTG+TGG - Chr7:71018971-71018990 MsG0780039951.01.T01:intron 50.0%
AGACACCAACCTCTCAGACA+AGG - Chr7:71020680-71020699 MsG0780039951.01.T01:intron 50.0%
AGAGATGCGGCGAGCATATA+TGG - Chr7:71018303-71018322 MsG0780039951.01.T01:CDS 50.0%
AGAGGGTGGATGGTTGGATT+TGG - Chr7:71020454-71020473 MsG0780039951.01.T01:CDS 50.0%
AGATGTAGAGGGTGGATGGT+TGG - Chr7:71020448-71020467 MsG0780039951.01.T01:CDS 50.0%
ATCAGGTGACTCAGGCTGAA+TGG + Chr7:71018759-71018778 None:intergenic 50.0%
ATCGTGACCGTTACCATGAC+AGG - Chr7:71020874-71020893 MsG0780039951.01.T01:intron 50.0%
ATCGTGATCATGACCGTGAC+AGG - Chr7:71021160-71021179 MsG0780039951.01.T01:CDS 50.0%
ATGACAGGAGCTCTTCAGAG+AGG - Chr7:71020889-71020908 MsG0780039951.01.T01:intron 50.0%
ATGGGTCGGGTTATGGAGTT+GGG - Chr7:71020072-71020091 MsG0780039951.01.T01:intron 50.0%
ATGTAACTTCCCTCAGGTGG+AGG + Chr7:71019650-71019669 None:intergenic 50.0%
CATGACAAGAGCAATCGGAG+AGG - Chr7:71021098-71021117 MsG0780039951.01.T01:intron 50.0%
CGTGACATGTAACTTCCCTC+AGG + Chr7:71019656-71019675 None:intergenic 50.0%
CTCACGTGGAAGGAGTTCTT+CGG - Chr7:71020806-71020825 MsG0780039951.01.T01:intron 50.0%
CTCTCCGATTGCTCTTGTCA+TGG + Chr7:71021100-71021119 None:intergenic 50.0%
GACATGTAACTTCCCTCAGG+TGG + Chr7:71019653-71019672 None:intergenic 50.0%
GAGGAGTGACGTTCCATGAA+AGG - Chr7:71021195-71021214 MsG0780039951.01.T01:intron 50.0%
GATGAGATGTAGAGGGTGGA+TGG - Chr7:71020444-71020463 MsG0780039951.01.T01:CDS 50.0%
GCCTATCATCCCATTCAAGC+TGG - Chr7:71017703-71017722 MsG0780039951.01.T01:three_prime_UTR 50.0%
GGAAGATGAGATGTAGAGGG+TGG - Chr7:71020440-71020459 MsG0780039951.01.T01:CDS 50.0%
GGAGTGATCGTTACCAAGAG+AGG - Chr7:71021024-71021043 MsG0780039951.01.T01:intron 50.0%
GGTACAATAAGGGTCACCAG+TGG + Chr7:71017921-71017940 None:intergenic 50.0%
GGTATTCTCCTGCTGGACTA+AGG - Chr7:71021362-71021381 MsG0780039951.01.T01:CDS 50.0%
GGTGGCATTTAGCATGGGAA+AGG + Chr7:71020561-71020580 None:intergenic 50.0%
GGTGGTTGGATGAGTCATGA+AGG + Chr7:71019942-71019961 None:intergenic 50.0%
GTTGTAGACCTTAGTCCAGC+AGG + Chr7:71021373-71021392 None:intergenic 50.0%
TATGGGTCGGGTTATGGAGT+TGG - Chr7:71020071-71020090 MsG0780039951.01.T01:intron 50.0%
TCTCAGCTGAGATCCTCTCA+TGG + Chr7:71020926-71020945 None:intergenic 50.0%
TCTCAGTTGAGCTCCTGTCT+TGG + Chr7:71021247-71021266 None:intergenic 50.0%
TCTTAGCTGAGCTCCTCTCT+TGG + Chr7:71021040-71021059 None:intergenic 50.0%
TGACCCATTTGGGGATCCTA+AGG - Chr7:71017895-71017914 MsG0780039951.01.T01:three_prime_UTR 50.0%
TGAGAGGATCTCAGCTGAGA+AGG - Chr7:71020926-71020945 MsG0780039951.01.T01:intron 50.0%
TTACCATGACCGAAGCTCGT+TGG - Chr7:71020842-71020861 MsG0780039951.01.T01:intron 50.0%
TTCCACGTGAGTAGTCTCCT+CGG + Chr7:71020797-71020816 None:intergenic 50.0%
! AAATTTTTCCCGCCTACGCG+AGG + Chr7:71021338-71021357 None:intergenic 50.0%
! GGTTGGTGTCTCTTCTAGGA+GGG + Chr7:71020671-71020690 None:intergenic 50.0%
! GTTGGTGTCTCTTCTAGGAG+GGG + Chr7:71020670-71020689 None:intergenic 50.0%
! TCTCTGAAGAGCTCCTGTCA+TGG + Chr7:71020890-71020909 None:intergenic 50.0%
! TGGCCTTAGGATCCCCAAAT+GGG + Chr7:71017901-71017920 None:intergenic 50.0%
!! AGGTTGGTGTCTCTTCTAGG+AGG + Chr7:71020672-71020691 None:intergenic 50.0%
!! ATGAAAGGCGCTCTTCAGAG+AGG - Chr7:71021210-71021229 MsG0780039951.01.T01:intron 50.0%
!! ATGCCACCGTGTTTTAGACC+AGG - Chr7:71020573-71020592 MsG0780039951.01.T01:CDS 50.0%
!! GAGAGGTTGGTGTCTCTTCT+AGG + Chr7:71020675-71020694 None:intergenic 50.0%
!! GTATAATGGTGGTGGGTGCA+AGG - Chr7:71020416-71020435 MsG0780039951.01.T01:CDS 50.0%
!! GTGACAAGAGCACTTCAGAG+AGG - Chr7:71021003-71021022 MsG0780039951.01.T01:intron 50.0%
!! TAAACACAGCTGGTGGTGGT+TGG + Chr7:71019956-71019975 None:intergenic 50.0%
!! TCTCTGAAGAGCGCCTTTCA+TGG + Chr7:71021211-71021230 None:intergenic 50.0%
AACTTCCCTCAGGTGGAGGT+GGG + Chr7:71019646-71019665 None:intergenic 55.0%
AGCTCTTGGAAGGGTAGCCA+TGG + Chr7:71019996-71020015 None:intergenic 55.0%
ATGACCGAAGCTCGTTGGAG+AGG - Chr7:71020847-71020866 MsG0780039951.01.T01:intron 55.0%
CAGTCCTCTCCAACGAGCTT+CGG + Chr7:71020854-71020873 None:intergenic 55.0%
CTTGGAAGGGTAGCCATGGT+TGG + Chr7:71019992-71020011 None:intergenic 55.0%
GAGGAGACTACTCACGTGGA+AGG - Chr7:71020796-71020815 MsG0780039951.01.T01:intron 55.0%
GGAGTGACCGTTACCATGAG+AGG - Chr7:71020910-71020929 MsG0780039951.01.T01:intron 55.0%
GGAGTGGTCGTTACCAAGAC+AGG - Chr7:71021231-71021250 MsG0780039951.01.T01:intron 55.0%
GTGATCATGACCGTGACAGG+AGG - Chr7:71021163-71021182 MsG0780039951.01.T01:CDS 55.0%
GTGGAAGGAGTTCTTCGGAG+AGG - Chr7:71020811-71020830 MsG0780039951.01.T01:intron 55.0%
TAACTTCCCTCAGGTGGAGG+TGG + Chr7:71019647-71019666 None:intergenic 55.0%
TAAGGGTCACCAGTGGCCTT+AGG + Chr7:71017914-71017933 None:intergenic 55.0%
TCAGGTGAAGAACCTGCGCT+TGG - Chr7:71018093-71018112 MsG0780039951.01.T01:three_prime_UTR 55.0%
TCTCCAACGAGCTTCGGTCA+TGG + Chr7:71020848-71020867 None:intergenic 55.0%
TGACAGGAGGCTCTTCAGAG+AGG - Chr7:71021176-71021195 MsG0780039951.01.T01:CDS 55.0%
TTTGGGGATCCTAAGGCCAC+TGG - Chr7:71017902-71017921 MsG0780039951.01.T01:three_prime_UTR 55.0%
! CTCTGAAGAGCCTCCTGTCA+CGG + Chr7:71021176-71021195 None:intergenic 55.0%
! GAAGAACCTGCGCTTGGTGA+GGG - Chr7:71018099-71018118 MsG0780039951.01.T01:three_prime_UTR 55.0%
! GTGGCCTTAGGATCCCCAAA+TGG + Chr7:71017902-71017921 None:intergenic 55.0%
! GTGTCTCTTCTAGGAGGGGA+TGG + Chr7:71020666-71020685 None:intergenic 55.0%
! TGAAGAACCTGCGCTTGGTG+AGG - Chr7:71018098-71018117 MsG0780039951.01.T01:three_prime_UTR 55.0%
!! TAATGGTGGTGGGTGCAAGG+AGG - Chr7:71020419-71020438 MsG0780039951.01.T01:CDS 55.0%
AGACGAATCCTCGCGTAGGC+GGG - Chr7:71021327-71021346 MsG0780039951.01.T01:CDS 60.0%
AGGCGCTCTTCAGAGAGGAG+TGG - Chr7:71021215-71021234 MsG0780039951.01.T01:intron 60.0%
CAATGTCCCTCACCAAGCGC+AGG + Chr7:71018108-71018127 None:intergenic 60.0%
CACCGAGGAGACTACTCACG+TGG - Chr7:71020792-71020811 MsG0780039951.01.T01:intron 60.0%
GACAGCAGCTGATGCCTGGA+TGG - Chr7:71018678-71018697 MsG0780039951.01.T01:intron 60.0%
GAGACGAATCCTCGCGTAGG+CGG - Chr7:71021326-71021345 MsG0780039951.01.T01:CDS 60.0%
GCAGTGACTGGAGCTTCTCG+TGG - Chr7:71018250-71018269 MsG0780039951.01.T01:CDS 60.0%
GGTATCCCACCTCCACCTGA+GGG - Chr7:71019638-71019657 MsG0780039951.01.T01:CDS 60.0%
TGGTATCCCACCTCCACCTG+AGG - Chr7:71019637-71019656 MsG0780039951.01.T01:CDS 60.0%
! CTGCGCTTGGTGAGGGACAT+TGG - Chr7:71018106-71018125 MsG0780039951.01.T01:three_prime_UTR 60.0%
Chromosome Type Strat End Strand Name
Chr7 gene 71017617 71021658 71017617 ID=MsG0780039951.01;Name=MsG0780039951.01
Chr7 mRNA 71017617 71021658 71017617 ID=MsG0780039951.01.T01;Parent=MsG0780039951.01;Name=MsG0780039951.01.T01;_AED=0.41;_eAED=0.41;_QI=41|1|1|1|1|1|8|591|339
Chr7 exon 71017617 71018615 71017617 ID=MsG0780039951.01.T01:exon:13620;Parent=MsG0780039951.01.T01
Chr7 exon 71019593 71019671 71019593 ID=MsG0780039951.01.T01:exon:13619;Parent=MsG0780039951.01.T01
Chr7 exon 71020399 71020474 71020399 ID=MsG0780039951.01.T01:exon:13618;Parent=MsG0780039951.01.T01
Chr7 exon 71020559 71020649 71020559 ID=MsG0780039951.01.T01:exon:13617;Parent=MsG0780039951.01.T01
Chr7 exon 71020951 71021021 71020951 ID=MsG0780039951.01.T01:exon:13616;Parent=MsG0780039951.01.T01
Chr7 exon 71021148 71021199 71021148 ID=MsG0780039951.01.T01:exon:13615;Parent=MsG0780039951.01.T01
Chr7 exon 71021284 71021381 71021284 ID=MsG0780039951.01.T01:exon:13614;Parent=MsG0780039951.01.T01
Chr7 exon 71021473 71021658 71021473 ID=MsG0780039951.01.T01:exon:13613;Parent=MsG0780039951.01.T01
Chr7 five_prime_UTR 71021618 71021658 71021618 ID=MsG0780039951.01.T01:five_prime_utr;Parent=MsG0780039951.01.T01
Chr7 CDS 71021473 71021617 71021473 ID=MsG0780039951.01.T01:cds;Parent=MsG0780039951.01.T01
Chr7 CDS 71021284 71021381 71021284 ID=MsG0780039951.01.T01:cds;Parent=MsG0780039951.01.T01
Chr7 CDS 71021148 71021199 71021148 ID=MsG0780039951.01.T01:cds;Parent=MsG0780039951.01.T01
Chr7 CDS 71020951 71021021 71020951 ID=MsG0780039951.01.T01:cds;Parent=MsG0780039951.01.T01
Chr7 CDS 71020559 71020649 71020559 ID=MsG0780039951.01.T01:cds;Parent=MsG0780039951.01.T01
Chr7 CDS 71020399 71020474 71020399 ID=MsG0780039951.01.T01:cds;Parent=MsG0780039951.01.T01
Chr7 CDS 71019593 71019671 71019593 ID=MsG0780039951.01.T01:cds;Parent=MsG0780039951.01.T01
Chr7 CDS 71018208 71018615 71018208 ID=MsG0780039951.01.T01:cds;Parent=MsG0780039951.01.T01
Chr7 three_prime_UTR 71017617 71018207 71017617 ID=MsG0780039951.01.T01:three_prime_utr;Parent=MsG0780039951.01.T01
Gene Sequence

>MsG0780039951.01.T01

ATGAGTGCAAGGTCGAGAAACTTGAACTCTGTTTTCTACTCCAATGCCTATCATCCCATTCAAGCTGGAAGCATTGATGGCACCGATATTGTTCCTCACGATAATGCCATTTTTCGTGCTCAACTTTGTTCCTCTATTGGCCTCTATGACCCATTTGGGGATCCTAAGGCCACTGGTGACCCTTATTGTACCCTTTTTGTGGGTCGTCTTTCTCGACTCACCACCGAAGAAACTATCCGAAAGGTTATGAGTGAGTTTGGTCAGGTGAAGAACCTGCGCTTGGTGAGGGACATTGTGACTGGAGCTTCTCGTGGTTATGCTTTTGTTGAATTTGAAACTGAAAGAGAGATGCGGCGAGCATATATGGATGCTCACCATTTGATTGTTGATGATTGTGAAATCATAGTTGATTATAATAGACAGCAGCTGATGCCTGGATGGATTCCGAGAAGATTAGGTGGTGGTCTTAGTGGTAATAAGGAATCAGGACAACTTCGTTTTGGTGGAAGAGAAAAACCATTTCGTGCACCCTTGAAACCAATTCCTTATGAGGAGTTGAAGAAGCTTGGTATCCCACCTCCACCTGAGGGAAGTTACATGTCACGTTTTCAGGTTCCATCCCCTCCTAGAAGAGACACCAACCTCTCAGACAAGGATGAAGACTCTGATAGAAGAGGTTCTAGTGATAGGAACATGACAAAAAAGACTAAGATGGAGGAAGAGCACTACAAAATGAGTTCAAGTCACCGAGGAGACTACTCACGTGGAAGGAGTTCTTCGGAGAGGAGTGATCATTACCATGACCGAAGCTCGTTGGAGAGGACTGATCGTGACCGTTACCATGACAGGAGCTCTTCAGAGAGGAGTGACCGTTACCATGAGAGGATCTCAGCTGAGAAGGCTGATCGTGATCGTTACCATGACAGGAGCTCTTCAGAGAGAAGTGACCGTTACCGTGACAAGAGCACTTCAGAGAGGAGTGATCGTTACCAAGAGAGGAGCTCAGCTAAGAAAGCATGA
Protein sequence

>MsG0780039951.01.T01

MSARSRNLNSVFYSNAYHPIQAGSIDGTDIVPHDNAIFRAQLCSSIGLYDPFGDPKATGDPYCTLFVGRLSRLTTEETIRKVMSEFGQVKNLRLVRDIVTGASRGYAFVEFETEREMRRAYMDAHHLIVDDCEIIVDYNRQQLMPGWIPRRLGGGLSGNKESGQLRFGGREKPFRAPLKPIPYEELKKLGIPPPPEGSYMSRFQVPSPPRRDTNLSDKDEDSDRRGSSDRNMTKKTKMEEEHYKMSSSHRGDYSRGRSSSERSDHYHDRSSLERTDRDRYHDRSSSERSDRYHERISAEKADRDRYHDRSSSERSDRYRDKSTSERSDRYQERSSAKKA*