AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780040217.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040217.01.T01 MTR_7g086470 98.872 266 3 0 1 266 1 266 0.0 532
MsG0780040217.01.T01 MTR_7g086470 98.438 192 3 0 1 192 1 192 3.34e-136 382
MsG0780040217.01.T01 MTR_8g079680 37.981 208 116 3 53 253 32 233 9.95e-43 146
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040217.01.T01 AT4G23620 66.794 262 77 3 5 265 7 259 2.71e-121 347
MsG0780040217.01.T01 AT4G23620 63.636 275 77 4 5 265 7 272 1.08e-117 338
MsG0780040217.01.T01 AT5G66860 40.476 210 112 4 52 254 34 237 1.68e-44 151

Find 102 sgRNAs with CRISPR-Local

Find 358 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAAGCTGTTTGTAAAATTA+TGG 0.157665 7:+74512498 MsG0780040217.01.T01:CDS
CTTTGAATGTGACATTTATA+AGG 0.212828 7:+74508713 MsG0780040217.01.T01:CDS
CTTAAATCCACATCAATATA+TGG 0.221639 7:-74512397 None:intergenic
TTACAAACAGCTTCATCTTT+TGG 0.245961 7:-74512490 None:intergenic
GTAACTACTTATTGTATCTT+TGG 0.251706 7:+74512558 MsG0780040217.01.T01:exon
TCGATGATGTCTTCGTCATT+AGG 0.273733 7:-74508553 None:intergenic
CCATCTTATTAGTTGATTCT+TGG 0.275557 7:+74512634 MsG0780040217.01.T01:three_prime_UTR
TCGTACTTTGGGTTAGGTTT+TGG 0.283728 7:-74508286 None:intergenic
CGATGATGTCTTCGTCATTA+GGG 0.292294 7:-74508552 None:intergenic
TACCGACCTTGTATGTTTAT+CGG 0.318046 7:+74512794 MsG0780040217.01.T01:three_prime_UTR
GGATGGTTTCGTCGTACTTT+GGG 0.321382 7:-74508297 None:intergenic
GCCATTCCCCGCAAAGATTC+CGG 0.324964 7:+74508322 MsG0780040217.01.T01:CDS
GGTTTGAATCTGAATCAAAT+TGG 0.344633 7:-74508531 None:intergenic
AGTGGCGGCGGTGGAGGAAG+GGG 0.363667 7:-74508183 None:intergenic
GAAAGCCGTCGAGGTAGGTT+AGG 0.367957 7:-74508264 None:intergenic
TTTGAATGTGACATTTATAA+GGG 0.368199 7:+74508714 MsG0780040217.01.T01:CDS
TGGCTCTGGAGTGTGGATTA+AGG 0.373199 7:-74508224 None:intergenic
GGAAGGGGCGGAGGAGTGTG+CGG 0.375525 7:-74508168 None:intergenic
GGCGGTGGAGGAAGGGGCGG+AGG 0.376055 7:-74508177 None:intergenic
TGGCGGAGAAGTGGCGGCGG+TGG 0.378382 7:-74508192 None:intergenic
CCGTTCGTTCCGATCAGATC+AGG 0.382550 7:+74508443 MsG0780040217.01.T01:CDS
CGGAGAAGTGGCGGCGGTGG+AGG 0.383273 7:-74508189 None:intergenic
GAAGCTGTTTGTAAAATTAT+GGG 0.386857 7:+74512499 MsG0780040217.01.T01:CDS
GTTTCGTCGTACTTTGGGTT+AGG 0.390733 7:-74508292 None:intergenic
TGTAGTATGTGGTCTGGCTC+TGG 0.392426 7:-74508238 None:intergenic
GATCACCCATGAGCACCTTC+TGG 0.393208 7:-74512435 None:intergenic
GCCGGAATCTTTGCGGGGAA+TGG 0.394527 7:-74508323 None:intergenic
AGGATGGTTTCGTCGTACTT+TGG 0.396008 7:-74508298 None:intergenic
GCGGCCAACTTTACGCTCCT+TGG 0.414214 7:-74508359 None:intergenic
GTTGTGTTTCAGAAACCCTT+TGG 0.419943 7:-74512522 None:intergenic
GTGGTGAAGAGAAAGGGTTT+TGG 0.428880 7:-74508133 None:intergenic
TCATCTCCTCTGAATACAAT+AGG 0.430682 7:-74508769 None:intergenic
TTAAATCCACATCAATATAT+GGG 0.431795 7:-74512396 None:intergenic
GAAGTGGCGGCGGTGGAGGA+AGG 0.435729 7:-74508185 None:intergenic
GAAGGGGCGGAGGAGTGTGC+GGG 0.438831 7:-74508167 None:intergenic
AGAGGAGATGATATATCTCC+TGG 0.439796 7:+74508781 MsG0780040217.01.T01:CDS
AAGGGGCGGAGGAGTGTGCG+GGG 0.441342 7:-74508166 None:intergenic
TCCGAGCATCGTCTTCGAAC+AGG 0.442178 7:+74508384 MsG0780040217.01.T01:CDS
TGACAGATTCATTTGAAAGC+TGG 0.443599 7:+74508679 MsG0780040217.01.T01:intron
AAAGCCGTCGAGGTAGGTTA+GGG 0.451004 7:-74508263 None:intergenic
AGGGGTTGTAGTATGTGGTC+TGG 0.453043 7:-74508244 None:intergenic
AGATACAATAAGTAGTTACT+TGG 0.457131 7:-74512554 None:intergenic
TGTGGGCCAGAAGGTGCTCA+TGG 0.458165 7:+74512429 MsG0780040217.01.T01:CDS
ATCTAACCTTTCTTGAGTCC+AGG 0.460897 7:-74508799 None:intergenic
GGCGGCGGTGGAGGAAGGGG+CGG 0.466194 7:-74508180 None:intergenic
TGAGGATAGTTGAGAGGAGA+GGG 0.466577 7:-74508098 None:intergenic
TGATGTGGATTTAAGTGAGT+TGG 0.469740 7:+74512405 MsG0780040217.01.T01:CDS
TGCATTGTGGTGAAGAGAAA+GGG 0.471889 7:-74508139 None:intergenic
TAAGGGCTCCGTCAGATGCT+TGG 0.483656 7:+74508731 MsG0780040217.01.T01:CDS
TGTAGAGCTTTGTGTAACTC+AGG 0.486448 7:-74512748 None:intergenic
AGGGGCGGAGGAGTGTGCGG+GGG 0.489766 7:-74508165 None:intergenic
CAGTTATTGTGAACAAAACT+AGG 0.490000 7:-74512683 None:intergenic
TCCTGTTCGAAGACGATGCT+CGG 0.491020 7:-74508385 None:intergenic
CTTATAAATGTCACATTCAA+AGG 0.498069 7:-74508712 None:intergenic
CCAAGAATCAACTAATAAGA+TGG 0.498429 7:-74512634 None:intergenic
ACTACTTATTGTATCTTTGG+TGG 0.503503 7:+74512561 MsG0780040217.01.T01:exon
TTGTAAAATTATGGGCCAAA+GGG 0.504390 7:+74512507 MsG0780040217.01.T01:CDS
CGGTAGTGAGGATAGTTGAG+AGG 0.505122 7:-74508104 None:intergenic
GGATTTAAGTGAGTTGGATG+TGG 0.507332 7:+74512411 MsG0780040217.01.T01:CDS
GCCAACTTTACGCTCCTTGG+CGG 0.509358 7:-74508356 None:intergenic
ATGCATTGTGGTGAAGAGAA+AGG 0.514185 7:-74508140 None:intergenic
AAGTGGCGGCGGTGGAGGAA+GGG 0.515170 7:-74508184 None:intergenic
ATATCTCCTGGACTCAAGAA+AGG 0.519847 7:+74508793 MsG0780040217.01.T01:CDS
TTTGTAAAATTATGGGCCAA+AGG 0.522313 7:+74512506 MsG0780040217.01.T01:CDS
TCCGCCAAGGAGCGTAAAGT+TGG 0.526882 7:+74508355 MsG0780040217.01.T01:CDS
TGTGGTCTGGCTCTGGAGTG+TGG 0.529733 7:-74508231 None:intergenic
CTTCCTTGAATACCATCAAA+AGG 0.531879 7:+74512338 MsG0780040217.01.T01:CDS
ATTGGTGAAGAACTTGAAGA+TGG 0.535306 7:-74508513 None:intergenic
AGGTTAGGGGTTGTAGTATG+TGG 0.536070 7:-74508249 None:intergenic
GAAGATGGAAGAGGCGTGAG+AGG 0.537822 7:-74508498 None:intergenic
GATCGGAACGAACGGAAATG+AGG 0.538932 7:-74508435 None:intergenic
GTGAGGATAGTTGAGAGGAG+AGG 0.539122 7:-74508099 None:intergenic
TTTGCGGGGAATGGCGAGGA+TGG 0.546947 7:-74508314 None:intergenic
CGTTTGCGATGGCGGAGAAG+TGG 0.551652 7:-74508201 None:intergenic
GAAGAGGCGTGAGAGGAAGA+AGG 0.552327 7:-74508491 None:intergenic
GTGGATTAAGGCGTTTGCGA+TGG 0.554431 7:-74508212 None:intergenic
GGCGTGAGAGGAAGAAGGAA+CGG 0.555683 7:-74508486 None:intergenic
TTGCGATGGCGGAGAAGTGG+CGG 0.560803 7:-74508198 None:intergenic
TAAATCCACATCAATATATG+GGG 0.566905 7:-74512395 None:intergenic
GAAGAACTTGAAGATGGAAG+AGG 0.567823 7:-74508507 None:intergenic
GACGTTCCTATTGTATTCAG+AGG 0.569099 7:+74508763 MsG0780040217.01.T01:CDS
GGAAGAAGGAACGGCCGAGA+TGG 0.569332 7:-74508477 None:intergenic
GATTAAGGCGTTTGCGATGG+CGG 0.573246 7:-74508209 None:intergenic
ATCGTCTTCGAACAGGAAGA+CGG 0.582891 7:+74508391 MsG0780040217.01.T01:CDS
AGGAAACTCGTTAACCATCT+CGG 0.585561 7:+74508463 MsG0780040217.01.T01:CDS
GTGGGCCAGAAGGTGCTCAT+GGG 0.586262 7:+74512430 MsG0780040217.01.T01:CDS
CCTGATCTGATCGGAACGAA+CGG 0.594704 7:-74508443 None:intergenic
AACGAGTTTCCTGATCTGAT+CGG 0.599141 7:-74508452 None:intergenic
CGATGGCGGAGAAGTGGCGG+CGG 0.608841 7:-74508195 None:intergenic
CGAAGACGATGCTCGGAACG+CGG 0.618391 7:-74508378 None:intergenic
TGAGTTGGATGTGGGCCAGA+AGG 0.624190 7:+74512420 MsG0780040217.01.T01:CDS
GATTTAAGTGAGTTGGATGT+GGG 0.629473 7:+74512412 MsG0780040217.01.T01:CDS
ACTTTCAACCAAGCATCTGA+CGG 0.637239 7:-74508739 None:intergenic
AATCTTTGCGGGGAATGGCG+AGG 0.644316 7:-74508318 None:intergenic
ATCCGATAAACATACAAGGT+CGG 0.652992 7:-74512796 None:intergenic
ACATATCCGATAAACATACA+AGG 0.655811 7:-74512800 None:intergenic
AAGCCGTCGAGGTAGGTTAG+GGG 0.664900 7:-74508262 None:intergenic
GAACAGGAAGACGGTCAGCA+CGG 0.669527 7:+74508400 MsG0780040217.01.T01:CDS
CAACCCCTAACCTACCTCGA+CGG 0.677651 7:+74508259 MsG0780040217.01.T01:CDS
AAATCCACATCAATATATGG+GGG 0.690982 7:-74512394 None:intergenic
ACTCAAATGCATACACTGCG+AGG 0.694977 7:-74508592 None:intergenic
CAGGAAGACGGTCAGCACGG+TGG 0.739041 7:+74508403 MsG0780040217.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATCATCATTATAAAAAATAT+CGG - Chr7:74510920-74510939 None:intergenic 10.0%
!!! AGATTTTTTATAATGAAAAT+AGG - Chr7:74509801-74509820 None:intergenic 10.0%
!!! ATCAATTAATTGTAATTTTA+TGG + Chr7:74509443-74509462 MsG0780040217.01.T01:intron 10.0%
!!! TTATTTTTTATTTTATTGCA+TGG - Chr7:74509212-74509231 None:intergenic 10.0%
!! AAAATGCAAATTGATATTAA+AGG - Chr7:74510211-74510230 None:intergenic 15.0%
!! AAATGCAAATTGATATTAAA+GGG - Chr7:74510210-74510229 None:intergenic 15.0%
!! AAATTCAGTTACTAATTTAA+TGG - Chr7:74510628-74510647 None:intergenic 15.0%
!! AATAATGAAAACATTAATAG+TGG - Chr7:74511865-74511884 None:intergenic 15.0%
!! AATATATAAAACCAATTTCA+TGG + Chr7:74510557-74510576 MsG0780040217.01.T01:intron 15.0%
!! AATATTCACTTAAAATTGAA+TGG - Chr7:74510729-74510748 None:intergenic 15.0%
!! AATTCAGTTACTAATTTAAT+GGG - Chr7:74510627-74510646 None:intergenic 15.0%
!! ATAATCATTTAATGTTTGAA+TGG + Chr7:74511303-74511322 MsG0780040217.01.T01:intron 15.0%
!! ATTTGAAAACATAAAATTGA+TGG + Chr7:74510460-74510479 MsG0780040217.01.T01:intron 15.0%
!! TATATATATAGTTAGTACTT+AGG - Chr7:74510804-74510823 None:intergenic 15.0%
!! TCATCATTATAAAAAATATC+GGG - Chr7:74510919-74510938 None:intergenic 15.0%
!! TTAGTATTTGGTAAATAAAT+AGG + Chr7:74511200-74511219 MsG0780040217.01.T01:intron 15.0%
!! AAAAAACAAACACAAATTGT+CGG - Chr7:74508954-74508973 None:intergenic 20.0%
!! AATGCAAATTGATATTAAAG+GGG - Chr7:74510209-74510228 None:intergenic 20.0%
!! ACTAACTATATATATATGCT+AGG + Chr7:74510808-74510827 MsG0780040217.01.T01:intron 20.0%
!! ACTCTGTCAAAAAAAAAAAT+AGG + Chr7:74511229-74511248 MsG0780040217.01.T01:intron 20.0%
!! ATACAAAGTAAGATTTGTAT+CGG + Chr7:74511517-74511536 MsG0780040217.01.T01:intron 20.0%
!! ATATATTAATATCCATACCA+AGG - Chr7:74512214-74512233 None:intergenic 20.0%
!! GATTGAATTATAGTAAACTA+AGG + Chr7:74509245-74509264 MsG0780040217.01.T01:intron 20.0%
!! TAACATATAGTATGTATTGT+AGG + Chr7:74511494-74511513 MsG0780040217.01.T01:intron 20.0%
!! TCTAGATTAAACCAATTTAA+TGG + Chr7:74510756-74510775 MsG0780040217.01.T01:intron 20.0%
!! TCTTTGAATAATTGAATTGA+TGG + Chr7:74508641-74508660 MsG0780040217.01.T01:intron 20.0%
!! TTAAATCCACATCAATATAT+GGG - Chr7:74512399-74512418 None:intergenic 20.0%
!! TTATAATGATGATTAGCATT+TGG + Chr7:74510927-74510946 MsG0780040217.01.T01:intron 20.0%
!! TTATAGTAAACTAAGGTTAA+TGG + Chr7:74509252-74509271 MsG0780040217.01.T01:intron 20.0%
!! TTATCATGATAGTTAGTATT+TGG + Chr7:74511188-74511207 MsG0780040217.01.T01:intron 20.0%
!! TTTGAATGTGACATTTATAA+GGG + Chr7:74508714-74508733 MsG0780040217.01.T01:CDS 20.0%
!!! AAAGATTTAGACCAATTTTA+TGG - Chr7:74510513-74510532 None:intergenic 20.0%
!!! ATTAAATTGGTTTAATCTAG+AGG - Chr7:74510757-74510776 None:intergenic 20.0%
!!! TTCAAAAATTGATTTCCTTA+TGG + Chr7:74512072-74512091 MsG0780040217.01.T01:intron 20.0%
! AACTATATATATATGCTAGG+TGG + Chr7:74510811-74510830 MsG0780040217.01.T01:intron 25.0%
! AACTTAAAAATTTGTACGAC+AGG - Chr7:74510383-74510402 None:intergenic 25.0%
! AAGTCAGAAATGTTCAATAA+TGG - Chr7:74512157-74512176 None:intergenic 25.0%
! AATCTTACAAATGAATCCAT+TGG - Chr7:74509511-74509530 None:intergenic 25.0%
! AATTCAGTAAAGCTCAATTA+CGG - Chr7:74509301-74509320 None:intergenic 25.0%
! ACCAAAAATGTCACAAATTA+GGG - Chr7:74508830-74508849 None:intergenic 25.0%
! AGAAGGAAAAATTGTAAACA+TGG - Chr7:74509371-74509390 None:intergenic 25.0%
! AGATACAATAAGTAGTTACT+TGG - Chr7:74512557-74512576 None:intergenic 25.0%
! ATAACCACTCATACATTAAA+TGG - Chr7:74511020-74511039 None:intergenic 25.0%
! ATAACCATTTAATGTATGAG+TGG + Chr7:74511013-74511032 MsG0780040217.01.T01:intron 25.0%
! ATGCAAATTGATATTAAAGG+GGG - Chr7:74510208-74510227 None:intergenic 25.0%
! CAATTACTAAAAGCGAAATT+TGG + Chr7:74510272-74510291 MsG0780040217.01.T01:intron 25.0%
! CAATTCCTATAAGAATTTGT+TGG - Chr7:74510172-74510191 None:intergenic 25.0%
! CGTAGTTTACTATAATTCAA+TGG + Chr7:74509831-74509850 MsG0780040217.01.T01:intron 25.0%
! CTATTCCAACAAATTCTTAT+AGG + Chr7:74510164-74510183 MsG0780040217.01.T01:intron 25.0%
! CTTAAATCCACATCAATATA+TGG - Chr7:74512400-74512419 None:intergenic 25.0%
! CTTATAAATGTCACATTCAA+AGG - Chr7:74508715-74508734 None:intergenic 25.0%
! CTTTGAATGTGACATTTATA+AGG + Chr7:74508713-74508732 MsG0780040217.01.T01:CDS 25.0%
! GAAGCTGTTTGTAAAATTAT+GGG + Chr7:74512499-74512518 MsG0780040217.01.T01:CDS 25.0%
! GATTAAACTCACAAATCAAA+AGG - Chr7:74508623-74508642 None:intergenic 25.0%
! GTAACTACTTATTGTATCTT+TGG + Chr7:74512558-74512577 MsG0780040217.01.T01:exon 25.0%
! TAAATCCACATCAATATATG+GGG - Chr7:74512398-74512417 None:intergenic 25.0%
! TACAAAATCTAATATCCCTT+TGG + Chr7:74509320-74509339 MsG0780040217.01.T01:intron 25.0%
! TAGTTTATACAAAGATCATG+CGG - Chr7:74511377-74511396 None:intergenic 25.0%
! TGAAGCTGTTTGTAAAATTA+TGG + Chr7:74512498-74512517 MsG0780040217.01.T01:CDS 25.0%
! TGATGAAATTGAAAACTTCA+TGG + Chr7:74510583-74510602 MsG0780040217.01.T01:intron 25.0%
! TGTATGCATATATATGAGTT+AGG + Chr7:74509962-74509981 MsG0780040217.01.T01:intron 25.0%
! TTAGCATTTGGTAGATAAAT+AGG + Chr7:74510939-74510958 MsG0780040217.01.T01:intron 25.0%
! TTCATTTGTAAGATTTGTCA+TGG + Chr7:74509516-74509535 MsG0780040217.01.T01:intron 25.0%
! TTTAAGAGGATCCATAAAAT+TGG + Chr7:74510499-74510518 MsG0780040217.01.T01:intron 25.0%
! TTTAGTCAATAAAACGCAAA+AGG - Chr7:74511652-74511671 None:intergenic 25.0%
! TTTCATCAAAACCATGAAAT+TGG - Chr7:74510571-74510590 None:intergenic 25.0%
! TTTGTAATTGTATGTCTGTA+TGG - Chr7:74509601-74509620 None:intergenic 25.0%
!! AAAAAATAGGTCTAAGACTT+TGG + Chr7:74511242-74511261 MsG0780040217.01.T01:intron 25.0%
!! AAACATAAAATTGATGGCAA+CGG + Chr7:74510466-74510485 MsG0780040217.01.T01:intron 25.0%
!! GATAAATAGGTTTAAGACTT+TGG + Chr7:74510952-74510971 MsG0780040217.01.T01:intron 25.0%
!! TAAGTCCTTGTTTATATGTT+TGG - Chr7:74511469-74511488 None:intergenic 25.0%
!! TTTTTATCTGTCCAAAGAAA+GGG - Chr7:74510353-74510372 None:intergenic 25.0%
!!! AATTTGCATTTTAAGTCACA+AGG + Chr7:74510219-74510238 MsG0780040217.01.T01:intron 25.0%
!!! ATAAGAATTTGTTGGAATAG+AGG - Chr7:74510164-74510183 None:intergenic 25.0%
!!! ATTGAATTGATGGATTGTAT+TGG + Chr7:74508651-74508670 MsG0780040217.01.T01:intron 25.0%
!!! CGTACAAATTTTTAAGTTCA+TGG + Chr7:74510385-74510404 MsG0780040217.01.T01:intron 25.0%
!!! GTAGGTTTTTGTTTTATTCT+TGG + Chr7:74510085-74510104 MsG0780040217.01.T01:intron 25.0%
!!! TGATTTTTTGTCATTCTCAA+CGG - Chr7:74509427-74509446 None:intergenic 25.0%
!!! TTTTTGGTGTAATAATGTAC+TGG + Chr7:74508842-74508861 MsG0780040217.01.T01:intron 25.0%
!!! TTTTTTATCTGTCCAAAGAA+AGG - Chr7:74510354-74510373 None:intergenic 25.0%
!!! TTTTTTTTTTGACAGAGTCT+TGG - Chr7:74511227-74511246 None:intergenic 25.0%
AAAACCTGAGTTTATGTGAT+GGG + Chr7:74512030-74512049 MsG0780040217.01.T01:intron 30.0%
AAAATTGTAAACATGGTAGG+AGG - Chr7:74509364-74509383 None:intergenic 30.0%
AAATCCACATCAATATATGG+GGG - Chr7:74512397-74512416 None:intergenic 30.0%
AAATTGATATTAAAGGGGGA+AGG - Chr7:74510204-74510223 None:intergenic 30.0%
AAATTGTAAACATGGTAGGA+GGG - Chr7:74509363-74509382 None:intergenic 30.0%
AACAAATTAGGAGAGAAATC+AGG - Chr7:74509724-74509743 None:intergenic 30.0%
AAGATTTATGCCTATGTTGA+TGG + Chr7:74512117-74512136 MsG0780040217.01.T01:intron 30.0%
ACAAATTAGGAGAGAAATCA+GGG - Chr7:74509723-74509742 None:intergenic 30.0%
ACATATCCGATAAACATACA+AGG - Chr7:74512803-74512822 None:intergenic 30.0%
ACTACTTATTGTATCTTTGG+TGG + Chr7:74512561-74512580 MsG0780040217.01.T01:exon 30.0%
AGCTAATGAATTAAAGGAGT+TGG + Chr7:74509113-74509132 MsG0780040217.01.T01:intron 30.0%
AGCTTATTAAGAGCTTATTG+AGG - Chr7:74511617-74511636 None:intergenic 30.0%
ATAAGCTGTTTAATGCTTAC+AGG + Chr7:74511042-74511061 MsG0780040217.01.T01:intron 30.0%
ATCGCAAAATGATACATCAA+TGG - Chr7:74509566-74509585 None:intergenic 30.0%
ATGGATCCTCTTAAAGATTT+AGG - Chr7:74510494-74510513 None:intergenic 30.0%
CAAAAATGTCACAAATTAGG+GGG - Chr7:74508828-74508847 None:intergenic 30.0%
CAAAATTATCACAAACATGG+CGG + Chr7:74509657-74509676 MsG0780040217.01.T01:intron 30.0%
CACCAAAAATGTCACAAATT+AGG - Chr7:74508831-74508850 None:intergenic 30.0%
CAGTTATTGTGAACAAAACT+AGG - Chr7:74512686-74512705 None:intergenic 30.0%
CCAAAAATGTCACAAATTAG+GGG - Chr7:74508829-74508848 None:intergenic 30.0%
CCAAATCTCATCCATTAAAT+TGG - Chr7:74510770-74510789 None:intergenic 30.0%
CCAAGAATCAACTAATAAGA+TGG - Chr7:74512637-74512656 None:intergenic 30.0%
CGCTCCCTATATATATTAAA+GGG + Chr7:74509906-74509925 MsG0780040217.01.T01:intron 30.0%
CTCTTCCAAACATATAAACA+AGG + Chr7:74511461-74511480 MsG0780040217.01.T01:intron 30.0%
GAAACGAGAACAATTAATCA+TGG - Chr7:74509857-74509876 None:intergenic 30.0%
GAATAGAGGTGAAATTTCAT+CGG - Chr7:74510150-74510169 None:intergenic 30.0%
GAATAGTGAAAAACTCCATA+AGG - Chr7:74512090-74512109 None:intergenic 30.0%
GCACAAAATTATCACAAACA+TGG + Chr7:74509654-74509673 MsG0780040217.01.T01:intron 30.0%
GCTAATGAATTAAAGGAGTT+GGG + Chr7:74509114-74509133 MsG0780040217.01.T01:intron 30.0%
GCTGCCCTTTAATATATATA+GGG - Chr7:74509913-74509932 None:intergenic 30.0%
GGAAAAATTGTAAACATGGT+AGG - Chr7:74509367-74509386 None:intergenic 30.0%
GGTTTGAATCTGAATCAAAT+TGG - Chr7:74508534-74508553 None:intergenic 30.0%
GGTTTGAGCTAATGAATTAA+AGG + Chr7:74509107-74509126 MsG0780040217.01.T01:intron 30.0%
TAAAAGCGAAATTTGGACAA+AGG + Chr7:74510279-74510298 MsG0780040217.01.T01:intron 30.0%
TAAGCTGTTTAATGCTTACA+GGG + Chr7:74511043-74511062 MsG0780040217.01.T01:intron 30.0%
TATGCATACAATACACCAAA+TGG - Chr7:74509952-74509971 None:intergenic 30.0%
TCGCTCCCTATATATATTAA+AGG + Chr7:74509905-74509924 MsG0780040217.01.T01:intron 30.0%
TGCTTACAATAGTCTTTACT+TGG + Chr7:74512280-74512299 MsG0780040217.01.T01:intron 30.0%
TTAGTAACTGAATTTCTGTG+TGG + Chr7:74510633-74510652 MsG0780040217.01.T01:intron 30.0%
TTGTAAAATTATGGGCCAAA+GGG + Chr7:74512507-74512526 MsG0780040217.01.T01:CDS 30.0%
TTGTTTGTCACAATAGTGAA+CGG - Chr7:74509044-74509063 None:intergenic 30.0%
TTTGTAAAATTATGGGCCAA+AGG + Chr7:74512506-74512525 MsG0780040217.01.T01:CDS 30.0%
! AAAATTTGATATCCCCGTTT+TGG - Chr7:74509749-74509768 None:intergenic 30.0%
! ATACTTAACAGTCCTTTTGA+TGG - Chr7:74512353-74512372 None:intergenic 30.0%
! ATTGATGTATCATTTTGCGA+TGG + Chr7:74509565-74509584 MsG0780040217.01.T01:intron 30.0%
! CCAATTTAATGGATGAGATT+TGG + Chr7:74510767-74510786 MsG0780040217.01.T01:intron 30.0%
! CCATCTTATTAGTTGATTCT+TGG + Chr7:74512634-74512653 MsG0780040217.01.T01:three_prime_UTR 30.0%
! TACAAACAGCTTCATCTTTT+GGG - Chr7:74512492-74512511 None:intergenic 30.0%
! TTACAAACAGCTTCATCTTT+TGG - Chr7:74512493-74512512 None:intergenic 30.0%
!! AGCTAATTGAAGAGAGTATT+AGG + Chr7:74510245-74510264 MsG0780040217.01.T01:intron 30.0%
!! AGGAGTATTTAACTCTAAAG+AGG - Chr7:74509004-74509023 None:intergenic 30.0%
!! AGTAGTTACTTGGTTTTCTT+TGG - Chr7:74512547-74512566 None:intergenic 30.0%
!! TCCTAATTTGTTTGCCAAAA+CGG + Chr7:74509732-74509751 MsG0780040217.01.T01:intron 30.0%
AAAAATTTGTACGACAGGCA+TGG - Chr7:74510378-74510397 None:intergenic 35.0%
AAACCTGAGTTTATGTGATG+GGG + Chr7:74512031-74512050 MsG0780040217.01.T01:intron 35.0%
AATTTCTGTGTGGTCAATTC+TGG + Chr7:74510643-74510662 MsG0780040217.01.T01:intron 35.0%
ACGGATCCTAAATCTTTAAG+AGG + Chr7:74510485-74510504 MsG0780040217.01.T01:intron 35.0%
ACTGAAGTGTAAACAGTGTA+TGG + Chr7:74511413-74511432 MsG0780040217.01.T01:intron 35.0%
AGATCTTAAAGATGAACGCA+AGG - Chr7:74510432-74510451 None:intergenic 35.0%
ATATATATTAAAGGGCAGCC+CGG + Chr7:74509914-74509933 MsG0780040217.01.T01:intron 35.0%
ATCCGATAAACATACAAGGT+CGG - Chr7:74512799-74512818 None:intergenic 35.0%
ATGAAGTTCTCTGTTCCATA+TGG + Chr7:74510857-74510876 MsG0780040217.01.T01:intron 35.0%
ATTGGTGAAGAACTTGAAGA+TGG - Chr7:74508516-74508535 None:intergenic 35.0%
ATTTCTGTGTGGTCAATTCT+GGG + Chr7:74510644-74510663 MsG0780040217.01.T01:intron 35.0%
CAAAGGTTATACCCTTTCTT+TGG + Chr7:74510339-74510358 MsG0780040217.01.T01:intron 35.0%
CAAATGAATCCATTGGCATT+TGG - Chr7:74509504-74509523 None:intergenic 35.0%
CATACAATACACCAAATGGT+GGG - Chr7:74509948-74509967 None:intergenic 35.0%
CATCTACATGATAACTTGAG+TGG + Chr7:74510040-74510059 MsG0780040217.01.T01:intron 35.0%
CTAAAGCAACGATCATAAGA+AGG - Chr7:74509388-74509407 None:intergenic 35.0%
CTGAAGTGTAAACAGTGTAT+GGG + Chr7:74511414-74511433 MsG0780040217.01.T01:intron 35.0%
CTTCCTTGAATACCATCAAA+AGG + Chr7:74512338-74512357 MsG0780040217.01.T01:CDS 35.0%
CTTTCCTATGAATAGCCATA+TGG - Chr7:74511133-74511152 None:intergenic 35.0%
GAAAACCTGAGTTTATGTGA+TGG + Chr7:74512029-74512048 MsG0780040217.01.T01:intron 35.0%
GATCTTAAAGATGAACGCAA+GGG - Chr7:74510431-74510450 None:intergenic 35.0%
GATTAAAAGTTTAGACCGTC+TGG - Chr7:74510005-74510024 None:intergenic 35.0%
GGCTGCCCTTTAATATATAT+AGG - Chr7:74509914-74509933 None:intergenic 35.0%
GTAACAATAACTAGCACAAC+AGG - Chr7:74511986-74512005 None:intergenic 35.0%
TAAAACGCAAAAGGACCATT+CGG - Chr7:74511643-74511662 None:intergenic 35.0%
TACCGACCTTGTATGTTTAT+CGG + Chr7:74512794-74512813 MsG0780040217.01.T01:three_prime_UTR 35.0%
TACTATTTGCCAAATGCCAA+TGG + Chr7:74509492-74509511 MsG0780040217.01.T01:intron 35.0%
TATCCCTTTGGCAAACAAAT+AGG + Chr7:74509332-74509351 MsG0780040217.01.T01:intron 35.0%
TATTCCCCCATATATTGATG+TGG + Chr7:74512390-74512409 MsG0780040217.01.T01:CDS 35.0%
TCATCTCCTCTGAATACAAT+AGG - Chr7:74508772-74508791 None:intergenic 35.0%
TCTTAATAAGCTCTTCCGAA+TGG + Chr7:74511625-74511644 MsG0780040217.01.T01:intron 35.0%
TGAAGTGTAAACAGTGTATG+GGG + Chr7:74511415-74511434 MsG0780040217.01.T01:intron 35.0%
TGACAGATTCATTTGAAAGC+TGG + Chr7:74508679-74508698 MsG0780040217.01.T01:intron 35.0%
TGATGTGGATTTAAGTGAGT+TGG + Chr7:74512405-74512424 MsG0780040217.01.T01:CDS 35.0%
TGGATATCCATAACAAAGTG+TGG + Chr7:74510881-74510900 MsG0780040217.01.T01:intron 35.0%
TGTTCCATATGGCTATTCAT+AGG + Chr7:74511126-74511145 MsG0780040217.01.T01:intron 35.0%
TTAGAATGCTGCTCTGTATT+GGG + Chr7:74511904-74511923 MsG0780040217.01.T01:intron 35.0%
! AGTAAGATTTGTATCGGTGA+AGG + Chr7:74511523-74511542 MsG0780040217.01.T01:intron 35.0%
! CTTCTTATGATCGTTGCTTT+AGG + Chr7:74509386-74509405 MsG0780040217.01.T01:intron 35.0%
! GAGTTAAATACTCCTGCTTT+TGG + Chr7:74509009-74509028 MsG0780040217.01.T01:intron 35.0%
! GATTTAAGTGAGTTGGATGT+GGG + Chr7:74512412-74512431 MsG0780040217.01.T01:CDS 35.0%
! GGTCTAAACTTTTAATCGAG+CGG + Chr7:74510008-74510027 MsG0780040217.01.T01:intron 35.0%
! GTAAGATTTGTATCGGTGAA+GGG + Chr7:74511524-74511543 MsG0780040217.01.T01:intron 35.0%
! TTCAAGTTCTCTGTTCCATA+TGG + Chr7:74511115-74511134 MsG0780040217.01.T01:intron 35.0%
! TTTAGAATGCTGCTCTGTAT+TGG + Chr7:74511903-74511922 MsG0780040217.01.T01:intron 35.0%
!! AGCAGCATTCTAAAATTCAG+AGG - Chr7:74511897-74511916 None:intergenic 35.0%
!! AGTCCTTTTGATGGTATTCA+AGG - Chr7:74512344-74512363 None:intergenic 35.0%
!! CCCCTAATTTGTGACATTTT+TGG + Chr7:74508826-74508845 MsG0780040217.01.T01:intron 35.0%
!! CCTAATTTGTTTGCCAAAAC+GGG + Chr7:74509733-74509752 MsG0780040217.01.T01:intron 35.0%
!! CTAATTTGTTTGCCAAAACG+GGG + Chr7:74509734-74509753 MsG0780040217.01.T01:intron 35.0%
!! TATTTTTGCCGGAATCTTTG+CGG - Chr7:74508333-74508352 None:intergenic 35.0%
!! TCTAAGACTTTGGAGTTGTT+TGG + Chr7:74511252-74511271 MsG0780040217.01.T01:intron 35.0%
AACGAGTTTCCTGATCTGAT+CGG - Chr7:74508455-74508474 None:intergenic 40.0%
AAGTTTAGACCGTCTGGATT+TGG - Chr7:74509999-74510018 None:intergenic 40.0%
ACTTTCAACCAAGCATCTGA+CGG - Chr7:74508742-74508761 None:intergenic 40.0%
AGAAATTGAGATCGGTGAAG+AGG + Chr7:74510672-74510691 MsG0780040217.01.T01:intron 40.0%
AGAGGAGATGATATATCTCC+TGG + Chr7:74508781-74508800 MsG0780040217.01.T01:CDS 40.0%
AGCAGTTAATCATAGCAGCT+TGG + Chr7:74509065-74509084 MsG0780040217.01.T01:intron 40.0%
AGGAAACTCGTTAACCATCT+CGG + Chr7:74508463-74508482 MsG0780040217.01.T01:CDS 40.0%
ATATATATAGGGAGCGACTC+AGG - Chr7:74509902-74509921 None:intergenic 40.0%
ATATCTCCTGGACTCAAGAA+AGG + Chr7:74508793-74508812 MsG0780040217.01.T01:CDS 40.0%
ATCTAACCTTTCTTGAGTCC+AGG - Chr7:74508802-74508821 None:intergenic 40.0%
ATGCATTGTGGTGAAGAGAA+AGG - Chr7:74508143-74508162 None:intergenic 40.0%
CAACGATGTGCAATAGAACT+TGG + Chr7:74509689-74509708 MsG0780040217.01.T01:intron 40.0%
CAAGTTCTATTGCACATCGT+TGG - Chr7:74509691-74509710 None:intergenic 40.0%
CACTGTACCACACTTTGTTA+TGG - Chr7:74510891-74510910 None:intergenic 40.0%
CCTCCTATTTGTTTGCCAAA+GGG - Chr7:74509338-74509357 None:intergenic 40.0%
CCTTTGGCAAACAAATAGGA+GGG + Chr7:74509336-74509355 MsG0780040217.01.T01:intron 40.0%
CGATGATGTCTTCGTCATTA+GGG - Chr7:74508555-74508574 None:intergenic 40.0%
GAAGAACTTGAAGATGGAAG+AGG - Chr7:74508510-74508529 None:intergenic 40.0%
GACGTTCCTATTGTATTCAG+AGG + Chr7:74508763-74508782 MsG0780040217.01.T01:CDS 40.0%
GCAGTTAATCATAGCAGCTT+GGG + Chr7:74509066-74509085 MsG0780040217.01.T01:intron 40.0%
GCATACAATACACCAAATGG+TGG - Chr7:74509949-74509968 None:intergenic 40.0%
GTTATGGATATCCAGCCATA+TGG - Chr7:74510875-74510894 None:intergenic 40.0%
GTTGTGTTTCAGAAACCCTT+TGG - Chr7:74512525-74512544 None:intergenic 40.0%
TATATATTAAAGGGCAGCCC+GGG + Chr7:74509915-74509934 MsG0780040217.01.T01:intron 40.0%
TCACTTTGCACCATCAACAT+AGG - Chr7:74512130-74512149 None:intergenic 40.0%
TCGATGATGTCTTCGTCATT+AGG - Chr7:74508556-74508575 None:intergenic 40.0%
TGCATTGTGGTGAAGAGAAA+GGG - Chr7:74508142-74508161 None:intergenic 40.0%
TTGTCACAATAGTGAACGGA+AGG - Chr7:74509040-74509059 None:intergenic 40.0%
TTTGATGCCTTGTAACCTAG+CGG - Chr7:74511796-74511815 None:intergenic 40.0%
! AAAGGGTATAACCTTTGTCC+AGG - Chr7:74510336-74510355 None:intergenic 40.0%
! AGTTTATGTGATGGGGTAGA+CGG + Chr7:74512038-74512057 MsG0780040217.01.T01:intron 40.0%
! ATTTTTGCCGGAATCTTTGC+GGG - Chr7:74508332-74508351 None:intergenic 40.0%
! CTCATCACCACAATTTTTGC+AGG + Chr7:74512313-74512332 MsG0780040217.01.T01:intron 40.0%
! GATGTATCATTTTGCGATGG+TGG + Chr7:74509568-74509587 MsG0780040217.01.T01:intron 40.0%
! GGATTTAAGTGAGTTGGATG+TGG + Chr7:74512411-74512430 MsG0780040217.01.T01:CDS 40.0%
! GGGAGTGTAGAAATTGAGAT+CGG + Chr7:74510664-74510683 MsG0780040217.01.T01:intron 40.0%
! TAAAGTCCAGCTTTCAAGTC+TGG + Chr7:74509141-74509160 MsG0780040217.01.T01:intron 40.0%
! TGGTGAAGAGAAAGGGTTTT+GGG - Chr7:74508135-74508154 None:intergenic 40.0%
! TGTAGAGCTTTGTGTAACTC+AGG - Chr7:74512751-74512770 None:intergenic 40.0%
!! CCCGTTTTGGCAAACAAATT+AGG - Chr7:74509736-74509755 None:intergenic 40.0%
!! GGGTGAAGAAGTTTTAATGC+AGG - Chr7:74512472-74512491 None:intergenic 40.0%
!! TCGTACTTTGGGTTAGGTTT+TGG - Chr7:74508289-74508308 None:intergenic 40.0%
!! TGCTTACAGGGTTTTATGCT+AGG + Chr7:74511055-74511074 MsG0780040217.01.T01:intron 40.0%
!! TGGATGAGATTTGGTGTCAA+TGG + Chr7:74510776-74510795 MsG0780040217.01.T01:intron 40.0%
!! TTACAGGGTTTTATGCTAGG+TGG + Chr7:74511058-74511077 MsG0780040217.01.T01:intron 40.0%
!! TTGGTAGTGATTACGTTTCC+AGG + Chr7:74510104-74510123 MsG0780040217.01.T01:intron 40.0%
!!! AGAAAGGGTTTTGGGTTTTG+CGG - Chr7:74508127-74508146 None:intergenic 40.0%
AATACTCCAGTCACCACTGT+GGG + Chr7:74511699-74511718 MsG0780040217.01.T01:intron 45.0%
ACTCAAATGCATACACTGCG+AGG - Chr7:74508595-74508614 None:intergenic 45.0%
AGAGGAATGTTCCTGGACAA+AGG + Chr7:74510322-74510341 MsG0780040217.01.T01:intron 45.0%
AGGATGGTTTCGTCGTACTT+TGG - Chr7:74508301-74508320 None:intergenic 45.0%
AGGTTAGGGGTTGTAGTATG+TGG - Chr7:74508252-74508271 None:intergenic 45.0%
AGTTCTCTGTTCCATATGGC+TGG + Chr7:74510861-74510880 MsG0780040217.01.T01:intron 45.0%
ATAACCTTACCATGAGCGTC+AGG + Chr7:74511744-74511763 MsG0780040217.01.T01:intron 45.0%
ATCGTCTTCGAACAGGAAGA+CGG + Chr7:74508391-74508410 MsG0780040217.01.T01:CDS 45.0%
ATGCTAGGTGGTATGTGCAA+TGG + Chr7:74510823-74510842 MsG0780040217.01.T01:intron 45.0%
ATGGGGGAATAATGTCTGCA+GGG - Chr7:74512381-74512400 None:intergenic 45.0%
CCCTCCTATTTGTTTGCCAA+AGG - Chr7:74509339-74509358 None:intergenic 45.0%
CCCTTTGGCAAACAAATAGG+AGG + Chr7:74509335-74509354 MsG0780040217.01.T01:intron 45.0%
CGTCCATATCAGTTAGAGCA+GGG - Chr7:74512191-74512210 None:intergenic 45.0%
CTACAACACGTGAGTACAGA+GGG - Chr7:74510069-74510088 None:intergenic 45.0%
CTACCCCATCACATAAACTC+AGG - Chr7:74512037-74512056 None:intergenic 45.0%
GGATGGTTTCGTCGTACTTT+GGG - Chr7:74508300-74508319 None:intergenic 45.0%
GTCCATATCAGTTAGAGCAG+GGG - Chr7:74512190-74512209 None:intergenic 45.0%
GTTAATCATAGCAGCTTGGG+CGG + Chr7:74509069-74509088 MsG0780040217.01.T01:intron 45.0%
GTTCTATTGCACATCGTTGG+TGG - Chr7:74509688-74509707 None:intergenic 45.0%
TACAACACGTGAGTACAGAG+GGG - Chr7:74510068-74510087 None:intergenic 45.0%
TAGAAACAACCTGACGCTCA+TGG - Chr7:74511756-74511775 None:intergenic 45.0%
TATGGGGGAATAATGTCTGC+AGG - Chr7:74512382-74512401 None:intergenic 45.0%
TCTAACTGATATGGACGCCT+TGG + Chr7:74512194-74512213 MsG0780040217.01.T01:intron 45.0%
TGAGGATAGTTGAGAGGAGA+GGG - Chr7:74508101-74508120 None:intergenic 45.0%
TGCTAGGTGGTATGTGCAAT+GGG + Chr7:74511071-74511090 MsG0780040217.01.T01:intron 45.0%
TGCTCTGTATTGGGATGACA+AGG + Chr7:74511913-74511932 MsG0780040217.01.T01:intron 45.0%
TGGCTATTCATAGGAAAGCG+TGG + Chr7:74511135-74511154 MsG0780040217.01.T01:intron 45.0%
! AATTTCATCGGCTGCAGAAG+AGG - Chr7:74510138-74510157 None:intergenic 45.0%
! ATTTCATCGGCTGCAGAAGA+GGG - Chr7:74510137-74510156 None:intergenic 45.0%
! GTGGTGAAGAGAAAGGGTTT+TGG - Chr7:74508136-74508155 None:intergenic 45.0%
! GTTTCGTCGTACTTTGGGTT+AGG - Chr7:74508295-74508314 None:intergenic 45.0%
! TTTTTGCCGGAATCTTTGCG+GGG - Chr7:74508331-74508350 None:intergenic 45.0%
!! AGATCGGTGAAGAGGTACTA+AGG + Chr7:74510680-74510699 MsG0780040217.01.T01:intron 45.0%
!! CTTGGCGGAGATATTTTTGC+CGG - Chr7:74508344-74508363 None:intergenic 45.0%
!! GGAAGCACCTGCAAAAATTG+TGG - Chr7:74512323-74512342 None:intergenic 45.0%
!! TGTTGATGGTGCAAAGTGAC+TGG + Chr7:74512131-74512150 MsG0780040217.01.T01:intron 45.0%
!!! TTTTGGGTTTTGCGGTAGTG+AGG - Chr7:74508119-74508138 None:intergenic 45.0%
AAAGCCGTCGAGGTAGGTTA+GGG - Chr7:74508266-74508285 None:intergenic 50.0%
ACAACACGTGAGTACAGAGG+GGG - Chr7:74510067-74510086 None:intergenic 50.0%
ACAACCTGACGCTCATGGTA+AGG - Chr7:74511751-74511770 None:intergenic 50.0%
ACTCTCACTAAACCCCACAG+TGG - Chr7:74511715-74511734 None:intergenic 50.0%
AGGGGTTGTAGTATGTGGTC+TGG - Chr7:74508247-74508266 None:intergenic 50.0%
ATACTCCAGTCACCACTGTG+GGG + Chr7:74511700-74511719 MsG0780040217.01.T01:intron 50.0%
CCGTTGACACCAAATCCAGA+CGG + Chr7:74509987-74510006 MsG0780040217.01.T01:intron 50.0%
CCTACAACACGTGAGTACAG+AGG - Chr7:74510070-74510089 None:intergenic 50.0%
CCTCTGTACTCACGTGTTGT+AGG + Chr7:74510067-74510086 MsG0780040217.01.T01:intron 50.0%
CCTGATCTGATCGGAACGAA+CGG - Chr7:74508446-74508465 None:intergenic 50.0%
CGGAAGGAAAGACCAAAAGC+AGG - Chr7:74509024-74509043 None:intergenic 50.0%
CGGCAAAAATATCTCCGCCA+AGG + Chr7:74508342-74508361 MsG0780040217.01.T01:CDS 50.0%
CGGTAGTGAGGATAGTTGAG+AGG - Chr7:74508107-74508126 None:intergenic 50.0%
CTGATATGGACGCCTTGGTA+TGG + Chr7:74512199-74512218 MsG0780040217.01.T01:intron 50.0%
GAATACTCCAGTCACCACTG+TGG + Chr7:74511698-74511717 MsG0780040217.01.T01:intron 50.0%
GACCCCTGCTCTAACTGATA+TGG + Chr7:74512185-74512204 MsG0780040217.01.T01:intron 50.0%
GATCGGAACGAACGGAAATG+AGG - Chr7:74508438-74508457 None:intergenic 50.0%
GCGTCCATATCAGTTAGAGC+AGG - Chr7:74512192-74512211 None:intergenic 50.0%
GTGAGGATAGTTGAGAGGAG+AGG - Chr7:74508102-74508121 None:intergenic 50.0%
GTTGTGCAGAGGAATGTTCC+TGG + Chr7:74510315-74510334 MsG0780040217.01.T01:intron 50.0%
TCCTGTTCGAAGACGATGCT+CGG - Chr7:74508388-74508407 None:intergenic 50.0%
TGCTAGGTGGTATGTGCAAC+AGG + Chr7:74510824-74510843 MsG0780040217.01.T01:intron 50.0%
TTTACGTCGTGGTTGTGCAG+AGG + Chr7:74510304-74510323 MsG0780040217.01.T01:intron 50.0%
! GATTAAGGCGTTTGCGATGG+CGG - Chr7:74508212-74508231 None:intergenic 50.0%
! GTGGATTAAGGCGTTTGCGA+TGG - Chr7:74508215-74508234 None:intergenic 50.0%
! TCCAGCTTTCAAGTCTGGCA+GGG + Chr7:74509146-74509165 MsG0780040217.01.T01:intron 50.0%
! TGTAGTATGTGGTCTGGCTC+TGG - Chr7:74508241-74508260 None:intergenic 50.0%
!! CCGTCTGGATTTGGTGTCAA+CGG - Chr7:74509990-74510009 None:intergenic 50.0%
!! GGACAAAGGCATTTACGTCG+TGG + Chr7:74510293-74510312 MsG0780040217.01.T01:intron 50.0%
!! TGGCTCTGGAGTGTGGATTA+AGG - Chr7:74508227-74508246 None:intergenic 50.0%
!! TTTTGGAAAGCCGTCGAGGT+AGG - Chr7:74508272-74508291 None:intergenic 50.0%
!!! TAGGTTTTGGAAAGCCGTCG+AGG - Chr7:74508276-74508295 None:intergenic 50.0%
AAGCCGTCGAGGTAGGTTAG+GGG - Chr7:74508265-74508284 None:intergenic 55.0%
AATCTTTGCGGGGAATGGCG+AGG - Chr7:74508321-74508340 None:intergenic 55.0%
ATCATAGCAGCTTGGGCGGT+TGG + Chr7:74509073-74509092 MsG0780040217.01.T01:intron 55.0%
ATTAAAGGGCAGCCCGGGAA+GGG + Chr7:74509920-74509939 MsG0780040217.01.T01:intron 55.0%
CAACCCCTAACCTACCTCGA+CGG + Chr7:74508259-74508278 MsG0780040217.01.T01:CDS 55.0%
CCGTTCGTTCCGATCAGATC+AGG + Chr7:74508443-74508462 MsG0780040217.01.T01:CDS 55.0%
CTAAACCCCACAGTGGTGAC+TGG - Chr7:74511708-74511727 None:intergenic 55.0%
GAAAGCCGTCGAGGTAGGTT+AGG - Chr7:74508267-74508286 None:intergenic 55.0%
GAACAGGAAGACGGTCAGCA+CGG + Chr7:74508400-74508419 MsG0780040217.01.T01:CDS 55.0%
GATCACCCATGAGCACCTTC+TGG - Chr7:74512438-74512457 None:intergenic 55.0%
GCAGAAGAGGGAGGTAAACC+TGG - Chr7:74510125-74510144 None:intergenic 55.0%
GCCAACTTTACGCTCCTTGG+CGG - Chr7:74508359-74508378 None:intergenic 55.0%
GCCATGACCGCTAGGTTACA+AGG + Chr7:74511786-74511805 MsG0780040217.01.T01:intron 55.0%
GCCATTCCCCGCAAAGATTC+CGG + Chr7:74508322-74508341 MsG0780040217.01.T01:CDS 55.0%
GCCTTGTAACCTAGCGGTCA+TGG - Chr7:74511790-74511809 None:intergenic 55.0%
GCTGAAAAGCCATGACCGCT+AGG + Chr7:74511778-74511797 MsG0780040217.01.T01:intron 55.0%
GGCGTGAGAGGAAGAAGGAA+CGG - Chr7:74508489-74508508 None:intergenic 55.0%
GGGCGGTTGGATAGCTCAAT+TGG + Chr7:74509086-74509105 MsG0780040217.01.T01:intron 55.0%
TAAGGGCTCCGTCAGATGCT+TGG + Chr7:74508731-74508750 MsG0780040217.01.T01:CDS 55.0%
TATTAAAGGGCAGCCCGGGA+AGG + Chr7:74509919-74509938 MsG0780040217.01.T01:intron 55.0%
TCCCTGCCAGACTTGAAAGC+TGG - Chr7:74509150-74509169 None:intergenic 55.0%
! GAAGAGGCGTGAGAGGAAGA+AGG - Chr7:74508494-74508513 None:intergenic 55.0%
! GAAGATGGAAGAGGCGTGAG+AGG - Chr7:74508501-74508520 None:intergenic 55.0%
! GTCCAGCTTTCAAGTCTGGC+AGG + Chr7:74509145-74509164 MsG0780040217.01.T01:intron 55.0%
! TCCGAGCATCGTCTTCGAAC+AGG + Chr7:74508384-74508403 MsG0780040217.01.T01:CDS 55.0%
! TCCGCCAAGGAGCGTAAAGT+TGG + Chr7:74508355-74508374 MsG0780040217.01.T01:CDS 55.0%
! TGAGTTGGATGTGGGCCAGA+AGG + Chr7:74512420-74512439 MsG0780040217.01.T01:CDS 55.0%
CGAAGACGATGCTCGGAACG+CGG - Chr7:74508381-74508400 None:intergenic 60.0%
GCCGGAATCTTTGCGGGGAA+TGG - Chr7:74508326-74508345 None:intergenic 60.0%
GCGGCCAACTTTACGCTCCT+TGG - Chr7:74508362-74508381 None:intergenic 60.0%
GGAAGAAGGAACGGCCGAGA+TGG - Chr7:74508480-74508499 None:intergenic 60.0%
TGTGCGGGGGAGATGCATTG+TGG - Chr7:74508155-74508174 None:intergenic 60.0%
TTAAAGGGCAGCCCGGGAAG+GGG + Chr7:74509921-74509940 MsG0780040217.01.T01:intron 60.0%
TTTGCGGGGAATGGCGAGGA+TGG - Chr7:74508317-74508336 None:intergenic 60.0%
! AAATGGTGGGACCCCTTCCC+GGG - Chr7:74509935-74509954 None:intergenic 60.0%
! CAAATGGTGGGACCCCTTCC+CGG - Chr7:74509936-74509955 None:intergenic 60.0%
! TCATCGGCTGCAGAAGAGGG+AGG - Chr7:74510134-74510153 None:intergenic 60.0%
!! CGTTTGCGATGGCGGAGAAG+TGG - Chr7:74508204-74508223 None:intergenic 60.0%
!! GTGGGCCAGAAGGTGCTCAT+GGG + Chr7:74512430-74512449 MsG0780040217.01.T01:CDS 60.0%
!! TGTGGGCCAGAAGGTGCTCA+TGG + Chr7:74512429-74512448 MsG0780040217.01.T01:CDS 60.0%
!! TGTGGTCTGGCTCTGGAGTG+TGG - Chr7:74508234-74508253 None:intergenic 60.0%
!! TTGCGATGGCGGAGAAGTGG+CGG - Chr7:74508201-74508220 None:intergenic 60.0%
AAGTGGCGGCGGTGGAGGAA+GGG - Chr7:74508187-74508206 None:intergenic 65.0%
CAGGAAGACGGTCAGCACGG+TGG + Chr7:74508403-74508422 MsG0780040217.01.T01:CDS 65.0%
CGGGAAGGGGTCCCACCATT+TGG + Chr7:74509934-74509953 MsG0780040217.01.T01:intron 65.0%
AGTGGCGGCGGTGGAGGAAG+GGG - Chr7:74508186-74508205 None:intergenic 70.0%
GAAGTGGCGGCGGTGGAGGA+AGG - Chr7:74508188-74508207 None:intergenic 70.0%
! AAGGGGCGGAGGAGTGTGCG+GGG - Chr7:74508169-74508188 None:intergenic 70.0%
! GAAGGGGCGGAGGAGTGTGC+GGG - Chr7:74508170-74508189 None:intergenic 70.0%
! GGAAGGGGCGGAGGAGTGTG+CGG - Chr7:74508171-74508190 None:intergenic 70.0%
!! CGATGGCGGAGAAGTGGCGG+CGG - Chr7:74508198-74508217 None:intergenic 70.0%
CGGAGAAGTGGCGGCGGTGG+AGG - Chr7:74508192-74508211 None:intergenic 75.0%
TGGCGGAGAAGTGGCGGCGG+TGG - Chr7:74508195-74508214 None:intergenic 75.0%
! AGGGGCGGAGGAGTGTGCGG+GGG - Chr7:74508168-74508187 None:intergenic 75.0%
! GGCGGCGGTGGAGGAAGGGG+CGG - Chr7:74508183-74508202 None:intergenic 80.0%
! GGCGGTGGAGGAAGGGGCGG+AGG - Chr7:74508180-74508199 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
Chr7 gene 74508062 74512872 74508062 ID=MsG0780040217.01;Name=MsG0780040217.01
Chr7 mRNA 74508062 74512872 74508062 ID=MsG0780040217.01.T01;Parent=MsG0780040217.01;Name=MsG0780040217.01.T01;_AED=0.44;_eAED=0.44;_QI=95|1|1|1|1|1|3|311|266
Chr7 exon 74508062 74508600 74508062 ID=MsG0780040217.01.T01:exon:13389;Parent=MsG0780040217.01.T01
Chr7 exon 74508685 74508814 74508685 ID=MsG0780040217.01.T01:exon:13390;Parent=MsG0780040217.01.T01
Chr7 exon 74512335 74512872 74512335 ID=MsG0780040217.01.T01:exon:13391;Parent=MsG0780040217.01.T01
Chr7 five_prime_UTR 74508062 74508156 74508062 ID=MsG0780040217.01.T01:five_prime_utr;Parent=MsG0780040217.01.T01
Chr7 CDS 74508157 74508600 74508157 ID=MsG0780040217.01.T01:cds;Parent=MsG0780040217.01.T01
Chr7 CDS 74508685 74508814 74508685 ID=MsG0780040217.01.T01:cds;Parent=MsG0780040217.01.T01
Chr7 CDS 74512335 74512561 74512335 ID=MsG0780040217.01.T01:cds;Parent=MsG0780040217.01.T01
Chr7 three_prime_UTR 74512562 74512872 74512562 ID=MsG0780040217.01.T01:three_prime_utr;Parent=MsG0780040217.01.T01
Gene Sequence

>MsG0780040217.01.T01

ATGCATCTCCCCCGCACACTCCTCCGCCCCTTCCTCCACCGCCGCCACTTCTCCGCCATCGCAAACGCCTTAATCCACACTCCAGAGCCAGACCACATACTACAACCCCTAACCTACCTCGACGGCTTTCCAAAACCTAACCCAAAGTACGACGAAACCATCCTCGCCATTCCCCGCAAAGATTCCGGCAAAAATATCTCCGCCAAGGAGCGTAAAGTTGGCCGCGTTCCGAGCATCGTCTTCGAACAGGAAGACGGTCAGCACGGTGGCAACAAACGCCTCATTTCCGTTCGTTCCGATCAGATCAGGAAACTCGTTAACCATCTCGGCCGTTCCTTCTTCCTCTCACGCCTCTTCCATCTTCAAGTTCTTCACCAATTTGATTCAGATTCAAACCCTAATGACGAAGACATCATCGAAAACGTTCGCGTTTTACCTCGCAGTATTCATTTGAAAGCTGGAACAGATGCACCTTTGAATGTGACATTTATAAGGGCTCCGTCAGATGCTTGGTTGAAAGTTGACGTTCCTATTGTATTCAGAGGAGATGATATATCTCCTGGACTCAAGAAAGGTGCTTCCTTGAATACCATCAAAAGGACTGTTAAGTATCTATGCCCTGCAGACATTATTCCCCCATATATTGATGTGGATTTAAGTGAGTTGGATGTGGGCCAGAAGGTGCTCATGGGTGATCTCAATGTTCATCCTGCATTAAAACTTCTTCACCCAAAAGATGAAGCTGTTTGTAAAATTATGGGCCAAAGGGTTTCTGAAACACAACCAAAGAAAACCAAGTAA
Protein sequence

>MsG0780040217.01.T01

MHLPRTLLRPFLHRRHFSAIANALIHTPEPDHILQPLTYLDGFPKPNPKYDETILAIPRKDSGKNISAKERKVGRVPSIVFEQEDGQHGGNKRLISVRSDQIRKLVNHLGRSFFLSRLFHLQVLHQFDSDSNPNDEDIIENVRVLPRSIHLKAGTDAPLNVTFIRAPSDAWLKVDVPIVFRGDDISPGLKKGASLNTIKRTVKYLCPADIIPPYIDVDLSELDVGQKVLMGDLNVHPALKLLHPKDEAVCKIMGQRVSETQPKKTK*