AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780040294.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040294.01.T01 MTR_7g087570 96.887 257 8 0 1 257 1 257 0.0 513
MsG0780040294.01.T01 MTR_5g065580 53.846 208 96 0 4 211 5 212 8.25e-80 240
MsG0780040294.01.T01 MTR_5g032660 50.000 216 103 1 1 211 1 216 2.44e-71 218
MsG0780040294.01.T01 MTR_5g065580 56.875 160 69 0 4 163 5 164 6.98e-63 195
MsG0780040294.01.T01 MTR_6g037260 54.795 73 32 1 1 72 1 73 6.80e-21 85.1
MsG0780040294.01.T01 MTR_1g084180 30.508 236 108 11 7 194 429 656 1.51e-12 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040294.01.T01 AT4G24380 48.276 203 105 0 6 208 9 211 1.46e-69 214
MsG0780040294.01.T01 AT4G24380 42.609 230 105 1 6 208 9 238 8.51e-64 200
MsG0780040294.01.T01 AT5G65400 47.343 207 104 1 10 211 31 237 5.24e-62 196
MsG0780040294.01.T01 AT5G65400 47.343 207 104 1 10 211 49 255 7.08e-62 196
MsG0780040294.01.T01 AT4G24380 50.000 158 79 0 6 163 9 166 2.45e-53 171
MsG0780040294.01.T01 AT4G24380 57.018 114 49 0 6 119 9 122 3.93e-42 140
MsG0780040294.01.T01 AT4G24380 55.769 104 46 0 6 109 9 112 4.34e-38 131
MsG0780040294.01.T01 AT4G24380 42.958 142 78 1 67 208 51 189 1.33e-37 132
MsG0780040294.01.T01 AT1G09280 29.091 220 117 8 7 194 352 564 1.77e-12 67.4

Find 58 sgRNAs with CRISPR-Local

Find 123 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGAAAATACTTTGCCTTCA+TGG 0.198578 7:-75576616 MsG0780040294.01.T01:CDS
TGTAGCTTGTAGAATTATTC+AGG 0.247441 7:-75574385 MsG0780040294.01.T01:three_prime_UTR
TATGCTAGGATCTCTAAATT+TGG 0.248946 7:+75575115 None:intergenic
TTGACAAACCACTTATAATA+AGG 0.268160 7:-75574992 MsG0780040294.01.T01:CDS
CAAATTGAGACACCAACTTT+TGG 0.317707 7:+75574571 None:intergenic
TGAACAGATTTAGCTTTGAT+AGG 0.324175 7:+75575071 None:intergenic
ATAGCTAATGGTCCCTTTGA+TGG 0.328032 7:-75575770 MsG0780040294.01.T01:CDS
ATCTATAAGCTAAAATCTTC+AGG 0.339325 7:+75574444 None:intergenic
GGTCCCTTTGATGGTTTCCT+TGG 0.349336 7:-75575761 MsG0780040294.01.T01:CDS
ATTGACACCTTTGTCTAGAT+TGG 0.387901 7:+75574516 None:intergenic
CTATGAGGATTACCTAATCT+TGG 0.401899 7:+75574948 None:intergenic
AATTGAAACCACTCAAAGTA+TGG 0.405128 7:+75575995 None:intergenic
ATCTAGACAAAGGTGTCAAT+GGG 0.406263 7:-75574513 MsG0780040294.01.T01:CDS
TGAAATTGAGAGAAAATAGA+AGG 0.417275 7:+75576544 None:intergenic
ACTGAATACATCATAGCTAA+TGG 0.425559 7:-75575782 MsG0780040294.01.T01:CDS
TGGTTTCCTTGGCTTCTCTC+AGG 0.437629 7:-75575750 MsG0780040294.01.T01:intron
AATCTAGACAAAGGTGTCAA+TGG 0.452475 7:-75574514 MsG0780040294.01.T01:CDS
GGTCACACTGTTCCAAGATT+AGG 0.455460 7:-75574960 MsG0780040294.01.T01:intron
TGAGGATGCCTTATTATAAG+TGG 0.465317 7:+75574984 None:intergenic
TTTCACTGTGTACACTAACT+TGG 0.474785 7:-75575825 MsG0780040294.01.T01:CDS
GAACAGATTTAGCTTTGATA+GGG 0.481239 7:+75575072 None:intergenic
TTCCTCCACCATACTTTGAG+TGG 0.492949 7:-75576003 MsG0780040294.01.T01:CDS
TTTAATAGGTTATCAAGCAC+AGG 0.500433 7:-75575296 MsG0780040294.01.T01:intron
TCAAACAGATGAAGTGTCTA+CGG 0.501156 7:-75574632 MsG0780040294.01.T01:intron
CATATGTGATGTAGCATACA+AGG 0.509028 7:-75575096 MsG0780040294.01.T01:CDS
ATCCTAAGCCAACCAAAAGT+TGG 0.512054 7:-75574583 MsG0780040294.01.T01:CDS
TTGGTTGAAAATTCCTTCTG+AGG 0.514375 7:-75575030 MsG0780040294.01.T01:CDS
CCAGATGGAAAATTTCCTGC+TGG 0.524122 7:-75576052 MsG0780040294.01.T01:CDS
AAGCCAAGGAAACCATCAAA+GGG 0.539516 7:+75575758 None:intergenic
ATGTCAGATTTCCCTCCAGC+AGG 0.545043 7:+75576037 None:intergenic
GAAGCCAAGGAAACCATCAA+AGG 0.545950 7:+75575757 None:intergenic
CACTGGTTCTGAATCCATGA+AGG 0.553128 7:+75576602 None:intergenic
TGAATTATTGAATTGAACAT+CGG 0.553192 7:-75574314 MsG0780040294.01.T01:three_prime_UTR
TGGAGGGAAATCTGACATAG+AGG 0.556934 7:-75576032 MsG0780040294.01.T01:CDS
CAATGGGGTGGATATAAACA+AGG 0.557544 7:-75574497 MsG0780040294.01.T01:CDS
TATGCTACATCACATATGCT+AGG 0.571861 7:+75575101 None:intergenic
GATGGAAAATTTCCTGCTGG+AGG 0.573977 7:-75576049 MsG0780040294.01.T01:CDS
AACCACTCAAAGTATGGTGG+AGG 0.578468 7:+75576001 None:intergenic
AAGTGGTTTGTCAAATGCAG+AGG 0.582281 7:+75575001 None:intergenic
GGAGGGAAATCTGACATAGA+GGG 0.591895 7:-75576031 MsG0780040294.01.T01:CDS
ATGGAAAATTTCCTGCTGGA+GGG 0.597402 7:-75576048 MsG0780040294.01.T01:CDS
TGTTTACCTGAGAGAAGCCA+AGG 0.598451 7:+75575744 None:intergenic
CTTCATGGATTCAGAACCAG+TGG 0.606196 7:-75576601 MsG0780040294.01.T01:CDS
GCAGAGGCAAGTTCCTCAGA+AGG 0.606458 7:+75575017 None:intergenic
ACACAATTTGTATTAAGCTG+AGG 0.607314 7:+75574415 None:intergenic
AACTGCTGAGACTGTAGAGG+TGG 0.612283 7:-75574473 MsG0780040294.01.T01:CDS
TGGTGACAGGAATTCCCAGA+TGG 0.617431 7:-75576067 MsG0780040294.01.T01:intron
GATAGTACCAATCTAGACAA+AGG 0.620626 7:-75574523 MsG0780040294.01.T01:CDS
TGAAACCACTCAAAGTATGG+TGG 0.622099 7:+75575998 None:intergenic
AGACAAAGGTGTCAATGGGG+TGG 0.622685 7:-75574509 MsG0780040294.01.T01:CDS
AATTTGTGAGCATGAAAGCA+AGG 0.637669 7:-75574554 MsG0780040294.01.T01:CDS
CAAACAGATGAAGTGTCTAC+GGG 0.639559 7:-75574631 MsG0780040294.01.T01:intron
CTTGGAACAGTGTGACCTTG+AGG 0.645405 7:+75574966 None:intergenic
CTTATAATAAGGCATCCTCA+AGG 0.651982 7:-75574981 MsG0780040294.01.T01:CDS
GGGAACTGCTGAGACTGTAG+AGG 0.662889 7:-75574476 MsG0780040294.01.T01:CDS
TGAGTGGTTTCAATTCGACA+AGG 0.681789 7:-75575987 MsG0780040294.01.T01:intron
TCTAGACAAAGGTGTCAATG+GGG 0.717647 7:-75574512 MsG0780040294.01.T01:CDS
AATGGGGTGGATATAAACAA+GGG 0.728197 7:-75574496 MsG0780040294.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTTGAATTGAAATAGAAA+AGG + Chr7:75575012-75575031 None:intergenic 15.0%
!! ATATAAAAATATTAATGTCG+CGG + Chr7:75574666-75574685 None:intergenic 15.0%
!! TCATTTATAATCTATCTAAA+AGG - Chr7:75575546-75575565 MsG0780040294.01.T01:intron 15.0%
!!! ATAAAAACACATTTTAGTTT+AGG + Chr7:75575401-75575420 None:intergenic 15.0%
!!! ATTAACACTTTTTATTTCTT+AGG + Chr7:75576090-75576109 None:intergenic 15.0%
!!! TGTTTTTCTCATAAATAAAT+TGG + Chr7:75576061-75576080 None:intergenic 15.0%
!! AAGAAAACAAATTCAATTAG+TGG + Chr7:75575602-75575621 None:intergenic 20.0%
!! ACTAGTAATTATTATTAGCA+AGG + Chr7:75574622-75574641 None:intergenic 20.0%
!! ATTGATACCAAAAACTTTAT+GGG + Chr7:75575816-75575835 None:intergenic 20.0%
!! ATTTCAGTGATTATATATCA+AGG - Chr7:75575029-75575048 MsG0780040294.01.T01:CDS 20.0%
!! CTAATAATAATTACTAGTGT+TGG - Chr7:75574624-75574643 MsG0780040294.01.T01:CDS 20.0%
!! TATAGTAACTCTTATATTTC+AGG - Chr7:75575110-75575129 MsG0780040294.01.T01:CDS 20.0%
!! TATTGATACCAAAAACTTTA+TGG + Chr7:75575817-75575836 None:intergenic 20.0%
!! TGAATTATTGAATTGAACAT+CGG - Chr7:75576645-75576664 MsG0780040294.01.T01:exon 20.0%
!! TGATTTAAACTAATTAAGCA+GGG - Chr7:75574556-75574575 MsG0780040294.01.T01:CDS 20.0%
!!! AAGATTTTAGCTTATAGATA+AGG - Chr7:75576519-75576538 MsG0780040294.01.T01:intron 20.0%
!!! AATATAACCAAAGTTGTTTT+TGG - Chr7:75574872-75574891 MsG0780040294.01.T01:intron 20.0%
!!! ATTTTATTGGTGAAAAAGAT+TGG - Chr7:75575910-75575929 MsG0780040294.01.T01:intron 20.0%
!!! TATTTTCTCTCAATTTCATT+TGG - Chr7:75574420-75574439 MsG0780040294.01.T01:three_prime_UTR 20.0%
!!! TGTTTTATCTTCAAAACTAA+AGG - Chr7:75576034-75576053 MsG0780040294.01.T01:CDS 20.0%
! ATCTATAAGCTAAAATCTTC+AGG + Chr7:75576518-75576537 None:intergenic 25.0%
! CTGATTTAAACTAATTAAGC+AGG - Chr7:75574555-75574574 MsG0780040294.01.T01:CDS 25.0%
! GAGTAGTTAATTAATTGACA+GGG - Chr7:75575768-75575787 MsG0780040294.01.T01:CDS 25.0%
! TAAAAAGCAAATCAGCAAAT+GGG - Chr7:75574390-75574409 MsG0780040294.01.T01:three_prime_UTR 25.0%
! TCAGTATTAAGTTCAAATTG+TGG + Chr7:75574539-75574558 None:intergenic 25.0%
! TGAAATTGAGAGAAAATAGA+AGG + Chr7:75574418-75574437 None:intergenic 25.0%
! TGAGTAGTTAATTAATTGAC+AGG - Chr7:75575767-75575786 MsG0780040294.01.T01:CDS 25.0%
! TTAAAAAGCAAATCAGCAAA+TGG - Chr7:75574389-75574408 MsG0780040294.01.T01:three_prime_UTR 25.0%
! TTGACAAACCACTTATAATA+AGG - Chr7:75575967-75575986 MsG0780040294.01.T01:intron 25.0%
! TTTGAAGATAAAACACTATG+AGG + Chr7:75576029-75576048 None:intergenic 25.0%
!! CCATCTTTTGTATTAAATCA+GGG - Chr7:75575622-75575641 MsG0780040294.01.T01:intron 25.0%
!! GCTAAATCTGTTCATTTTAT+TGG - Chr7:75575897-75575916 MsG0780040294.01.T01:intron 25.0%
!! TCCATCTTTTGTATTAAATC+AGG - Chr7:75575621-75575640 MsG0780040294.01.T01:intron 25.0%
!! TTGTCTTTTCTAATGTTTCT+TGG - Chr7:75574467-75574486 MsG0780040294.01.T01:CDS 25.0%
!!! AAGTTTTTGGTATCAATATC+AGG - Chr7:75575819-75575838 MsG0780040294.01.T01:CDS 25.0%
AATTGAAACCACTCAAAGTA+TGG + Chr7:75574967-75574986 None:intergenic 30.0%
ACAAAAATGGAAGGAGAAAA+TGG - Chr7:75574313-75574332 MsG0780040294.01.T01:three_prime_UTR 30.0%
ACACAATTTGTATTAAGCTG+AGG + Chr7:75576547-75576566 None:intergenic 30.0%
ACATTCAAGTACTATAGTGA+TGG + Chr7:75575327-75575346 None:intergenic 30.0%
ACTGAATACATCATAGCTAA+TGG - Chr7:75575177-75575196 MsG0780040294.01.T01:intron 30.0%
AGGAATGGAATTGTCTTTAT+CGG + Chr7:75575468-75575487 None:intergenic 30.0%
ATGAAAATACTTTGCCTTCA+TGG - Chr7:75574343-75574362 MsG0780040294.01.T01:three_prime_UTR 30.0%
CAAAAATGGAAGGAGAAAAT+GGG - Chr7:75574314-75574333 MsG0780040294.01.T01:three_prime_UTR 30.0%
CCCTGATTTAATACAAAAGA+TGG + Chr7:75575625-75575644 None:intergenic 30.0%
TAGTTCATGAATGTTAGGAA+TGG + Chr7:75575483-75575502 None:intergenic 30.0%
TATGCTAGGATCTCTAAATT+TGG + Chr7:75575847-75575866 None:intergenic 30.0%
TTATCGGCAAAATTGACTAA+GGG + Chr7:75575452-75575471 None:intergenic 30.0%
TTTAATAGGTTATCAAGCAC+AGG - Chr7:75575663-75575682 MsG0780040294.01.T01:intron 30.0%
TTTATCGGCAAAATTGACTA+AGG + Chr7:75575453-75575472 None:intergenic 30.0%
! ACACTTTCAGCACTTTTAAT+AGG - Chr7:75575649-75575668 MsG0780040294.01.T01:intron 30.0%
! CTTTTTAATAAAACTGCCAC+TGG + Chr7:75574377-75574396 None:intergenic 30.0%
! TGTAGCTTGTAGAATTATTC+AGG - Chr7:75576574-75576593 MsG0780040294.01.T01:CDS 30.0%
!! GAACAGATTTAGCTTTGATA+GGG + Chr7:75575890-75575909 None:intergenic 30.0%
!! TGAACAGATTTAGCTTTGAT+AGG + Chr7:75575891-75575910 None:intergenic 30.0%
AATGGGGTGGATATAAACAA+GGG - Chr7:75576463-75576482 MsG0780040294.01.T01:intron 35.0%
AATTTGTGAGCATGAAAGCA+AGG - Chr7:75576405-75576424 MsG0780040294.01.T01:intron 35.0%
ACACTTCATCTGTTTGAGTA+AGG + Chr7:75576324-75576343 None:intergenic 35.0%
AGCCTATAACTTAGTGCTAA+TGG - Chr7:75574585-75574604 MsG0780040294.01.T01:CDS 35.0%
ATTGACACCTTTGTCTAGAT+TGG + Chr7:75576446-75576465 None:intergenic 35.0%
CACACTAGTTCATGAATGTT+AGG + Chr7:75575488-75575507 None:intergenic 35.0%
CACCATTAGCACTAAGTTAT+AGG + Chr7:75574590-75574609 None:intergenic 35.0%
CATATGTGATGTAGCATACA+AGG - Chr7:75575863-75575882 MsG0780040294.01.T01:intron 35.0%
CTATAACTTAGTGCTAATGG+TGG - Chr7:75574588-75574607 MsG0780040294.01.T01:CDS 35.0%
CTATGAGGATTACCTAATCT+TGG + Chr7:75576014-75576033 None:intergenic 35.0%
GATACCAAAAACTTTATGGG+TGG + Chr7:75575813-75575832 None:intergenic 35.0%
GATAGTACCAATCTAGACAA+AGG - Chr7:75576436-75576455 MsG0780040294.01.T01:intron 35.0%
GTGACAACAACTCACATTTA+GGG - Chr7:75575505-75575524 MsG0780040294.01.T01:intron 35.0%
GTGTTGGATGAATGTGATTT+AGG - Chr7:75574640-75574659 MsG0780040294.01.T01:intron 35.0%
TATGCTACATCACATATGCT+AGG + Chr7:75575861-75575880 None:intergenic 35.0%
TGACTAAGGGAAGATACATT+TGG + Chr7:75575439-75575458 None:intergenic 35.0%
TGTAATTCTTCGCAAACTCA+AGG - Chr7:75574734-75574753 MsG0780040294.01.T01:intron 35.0%
TGTGACAACAACTCACATTT+AGG - Chr7:75575504-75575523 MsG0780040294.01.T01:intron 35.0%
TTGGTTGAAAATTCCTTCTG+AGG - Chr7:75575929-75575948 MsG0780040294.01.T01:intron 35.0%
TTTCACTGTGTACACTAACT+TGG - Chr7:75575134-75575153 MsG0780040294.01.T01:CDS 35.0%
! ACCACAAAATAGTTTTCGAC+AGG - Chr7:75576133-75576152 MsG0780040294.01.T01:intron 35.0%
! CAAATTGAGACACCAACTTT+TGG + Chr7:75576391-75576410 None:intergenic 35.0%
! CTTATAATAAGGCATCCTCA+AGG - Chr7:75575978-75575997 MsG0780040294.01.T01:intron 35.0%
! TCAAACAGATGAAGTGTCTA+CGG - Chr7:75576327-75576346 MsG0780040294.01.T01:intron 35.0%
! TCCTGTCGAAAACTATTTTG+TGG + Chr7:75576137-75576156 None:intergenic 35.0%
! TGAGGATGCCTTATTATAAG+TGG + Chr7:75575978-75575997 None:intergenic 35.0%
!! AATCTAGACAAAGGTGTCAA+TGG - Chr7:75576445-75576464 MsG0780040294.01.T01:intron 35.0%
!! ATCTAGACAAAGGTGTCAAT+GGG - Chr7:75576446-75576465 MsG0780040294.01.T01:intron 35.0%
!! CTGTCTCATGTTAGTTTGTA+CGG - Chr7:75575374-75575393 MsG0780040294.01.T01:intron 35.0%
AAGCCAAGGAAACCATCAAA+GGG + Chr7:75575204-75575223 None:intergenic 40.0%
ATAGCTAATGGTCCCTTTGA+TGG - Chr7:75575189-75575208 MsG0780040294.01.T01:intron 40.0%
ATATCTTCGCGATTGCAATG+TGG - Chr7:75574682-75574701 MsG0780040294.01.T01:intron 40.0%
ATCCTAAGCCAACCAAAAGT+TGG - Chr7:75576376-75576395 MsG0780040294.01.T01:intron 40.0%
ATGGAAAATTTCCTGCTGGA+GGG - Chr7:75574911-75574930 MsG0780040294.01.T01:intron 40.0%
CAATGGGGTGGATATAAACA+AGG - Chr7:75576462-75576481 MsG0780040294.01.T01:intron 40.0%
CCTGTCACCAAAAACAACTT+TGG + Chr7:75574882-75574901 None:intergenic 40.0%
TGAAACCACTCAAAGTATGG+TGG + Chr7:75574964-75574983 None:intergenic 40.0%
TGAGTGGTTTCAATTCGACA+AGG - Chr7:75574972-75574991 MsG0780040294.01.T01:CDS 40.0%
TGGTTTCAATTCGACAAGGT+GGG - Chr7:75574976-75574995 MsG0780040294.01.T01:CDS 40.0%
! AAGTGGTTTGTCAAATGCAG+AGG + Chr7:75575961-75575980 None:intergenic 40.0%
! CAAACAGATGAAGTGTCTAC+GGG - Chr7:75576328-75576347 MsG0780040294.01.T01:intron 40.0%
! CAGCAGGAAATTTTCCATCT+GGG + Chr7:75574909-75574928 None:intergenic 40.0%
! GCATCCACCCATAAAGTTTT+TGG - Chr7:75575806-75575825 MsG0780040294.01.T01:CDS 40.0%
! TTGAGACACCAACTTTTGGT+TGG + Chr7:75576387-75576406 None:intergenic 40.0%
!! TCTAGACAAAGGTGTCAATG+GGG - Chr7:75576447-75576466 MsG0780040294.01.T01:intron 40.0%
!!! CCAAAGTTGTTTTTGGTGAC+AGG - Chr7:75574879-75574898 MsG0780040294.01.T01:intron 40.0%
AACCACTCAAAGTATGGTGG+AGG + Chr7:75574961-75574980 None:intergenic 45.0%
CCAGATGGAAAATTTCCTGC+TGG - Chr7:75574907-75574926 MsG0780040294.01.T01:intron 45.0%
CTTCATGGATTCAGAACCAG+TGG - Chr7:75574358-75574377 MsG0780040294.01.T01:three_prime_UTR 45.0%
GAAGCCAAGGAAACCATCAA+AGG + Chr7:75575205-75575224 None:intergenic 45.0%
GATGGAAAATTTCCTGCTGG+AGG - Chr7:75574910-75574929 MsG0780040294.01.T01:intron 45.0%
GGAGGGAAATCTGACATAGA+GGG - Chr7:75574928-75574947 MsG0780040294.01.T01:intron 45.0%
GGTCACACTGTTCCAAGATT+AGG - Chr7:75575999-75576018 MsG0780040294.01.T01:CDS 45.0%
GTGGTTTCAATTCGACAAGG+TGG - Chr7:75574975-75574994 MsG0780040294.01.T01:CDS 45.0%
TGGAGGGAAATCTGACATAG+AGG - Chr7:75574927-75574946 MsG0780040294.01.T01:intron 45.0%
TGTTTACCTGAGAGAAGCCA+AGG + Chr7:75575218-75575237 None:intergenic 45.0%
TTCCTCCACCATACTTTGAG+TGG - Chr7:75574956-75574975 MsG0780040294.01.T01:intron 45.0%
! CCAGCAGGAAATTTTCCATC+TGG + Chr7:75574910-75574929 None:intergenic 45.0%
!! CACTGGTTCTGAATCCATGA+AGG + Chr7:75574360-75574379 None:intergenic 45.0%
!!! CACCAACTTTTGGTTGGCTT+AGG + Chr7:75576381-75576400 None:intergenic 45.0%
AACTGCTGAGACTGTAGAGG+TGG - Chr7:75576486-75576505 MsG0780040294.01.T01:intron 50.0%
ATGTCAGATTTCCCTCCAGC+AGG + Chr7:75574925-75574944 None:intergenic 50.0%
CTTGGAACAGTGTGACCTTG+AGG + Chr7:75575996-75576015 None:intergenic 50.0%
TGGTGACAGGAATTCCCAGA+TGG - Chr7:75574892-75574911 MsG0780040294.01.T01:intron 50.0%
TGGTTTCCTTGGCTTCTCTC+AGG - Chr7:75575209-75575228 MsG0780040294.01.T01:intron 50.0%
! GGTCCCTTTGATGGTTTCCT+TGG - Chr7:75575198-75575217 MsG0780040294.01.T01:intron 50.0%
!! AGACAAAGGTGTCAATGGGG+TGG - Chr7:75576450-75576469 MsG0780040294.01.T01:intron 50.0%
GCAGAGGCAAGTTCCTCAGA+AGG + Chr7:75575945-75575964 None:intergenic 55.0%
GGGAACTGCTGAGACTGTAG+AGG - Chr7:75576483-75576502 MsG0780040294.01.T01:intron 55.0%
Chromosome Type Strat End Strand Name
Chr7 gene 75574306 75576675 75574306 ID=MsG0780040294.01;Name=MsG0780040294.01
Chr7 mRNA 75574306 75576675 75574306 ID=MsG0780040294.01.T01;Parent=MsG0780040294.01;Name=MsG0780040294.01.T01;_AED=0.49;_eAED=0.49;_QI=13|1|1|1|1|1|6|156|257
Chr7 exon 75574306 75574646 75574306 ID=MsG0780040294.01.T01:exon:14846;Parent=MsG0780040294.01.T01
Chr7 exon 75574961 75575192 75574961 ID=MsG0780040294.01.T01:exon:14845;Parent=MsG0780040294.01.T01
Chr7 exon 75575297 75575338 75575297 ID=MsG0780040294.01.T01:exon:14844;Parent=MsG0780040294.01.T01
Chr7 exon 75575751 75575849 75575751 ID=MsG0780040294.01.T01:exon:14843;Parent=MsG0780040294.01.T01
Chr7 exon 75575988 75576080 75575988 ID=MsG0780040294.01.T01:exon:14842;Parent=MsG0780040294.01.T01
Chr7 exon 75576540 75576675 75576540 ID=MsG0780040294.01.T01:exon:14841;Parent=MsG0780040294.01.T01
Chr7 five_prime_UTR 75576663 75576675 75576663 ID=MsG0780040294.01.T01:five_prime_utr;Parent=MsG0780040294.01.T01
Chr7 CDS 75576540 75576662 75576540 ID=MsG0780040294.01.T01:cds;Parent=MsG0780040294.01.T01
Chr7 CDS 75575988 75576080 75575988 ID=MsG0780040294.01.T01:cds;Parent=MsG0780040294.01.T01
Chr7 CDS 75575751 75575849 75575751 ID=MsG0780040294.01.T01:cds;Parent=MsG0780040294.01.T01
Chr7 CDS 75575297 75575338 75575297 ID=MsG0780040294.01.T01:cds;Parent=MsG0780040294.01.T01
Chr7 CDS 75574961 75575192 75574961 ID=MsG0780040294.01.T01:cds;Parent=MsG0780040294.01.T01
Chr7 CDS 75574462 75574646 75574462 ID=MsG0780040294.01.T01:cds;Parent=MsG0780040294.01.T01
Chr7 three_prime_UTR 75574306 75574461 75574306 ID=MsG0780040294.01.T01:three_prime_utr;Parent=MsG0780040294.01.T01
Gene Sequence

>MsG0780040294.01.T01

ATGGAAGGAGAAAATGGGAGAAAGATGAAAATACTTTGCCTTCATGGATTCAGAACCAGTGGCAGTTTTATTAAAAAGCAAATCAGCAAATGGGATCCTTCTATTTTCTCTCAATTTCATTTGGAATTCCCAGATGGAAAATTTCCTGCTGGAGGGAAATCTGACATAGAGGGCATTTTTCCTCCACCATACTTTGAGTGGTTTCAATTCGACAAGGATTTCACTGTGTACACTAACTTGGACGAATGCATCTCATACTTGACTGAATACATCATAGCTAATGGTCCCTTTGATGGTTTCCTTGGCTTCTCTCAGGGTGCAACACTTTCAGCACTTTTAATAGGTTATCAAGCACAGGGAAAATTGCTAAAAGAGCATCCACCCATAAAGTTTTTGGTATCAATATCAGGATCCAAATTTAGAGATCCTAGCATATGTGATGTAGCATACAAGGACCCTATCAAAGCTAAATCTGTTCATTTTATTGGTGAAAAAGATTGGTTGAAAATTCCTTCTGAGGAACTTGCCTCTGCATTTGACAAACCACTTATAATAAGGCATCCTCAAGGTCACACTGTTCCAAGATTAGATGAAGTGTCTACGGGTCAGTTGCAAAATTTTGTTGCAGAAATCCTAAGCCAACCAAAAGTTGGTGTCTCAATTTGTGAGCATGAAAGCAAGGTAGAAATTGATAGTACCAATCTAGACAAAGGTGTCAATGGGGTGGATATAAACAAGGGAACTGCTGAGACTGTAGAGGTGGCTCAAGCCTGA
Protein sequence

>MsG0780040294.01.T01

MEGENGRKMKILCLHGFRTSGSFIKKQISKWDPSIFSQFHLEFPDGKFPAGGKSDIEGIFPPPYFEWFQFDKDFTVYTNLDECISYLTEYIIANGPFDGFLGFSQGATLSALLIGYQAQGKLLKEHPPIKFLVSISGSKFRDPSICDVAYKDPIKAKSVHFIGEKDWLKIPSEELASAFDKPLIIRHPQGHTVPRLDEVSTGQLQNFVAEILSQPKVGVSICEHESKVEIDSTNLDKGVNGVDINKGTAETVEVAQA*