AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780040470.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040470.01.T01 MTR_7g089190 79.495 317 40 3 1 317 22 313 5.14e-171 508
MsG0780040470.01.T01 MTR_7g089190 83.007 153 21 2 246 398 413 560 1.65e-73 252
MsG0780040470.01.T01 MTR_7g089190 78.261 69 15 0 375 443 607 675 8.36e-25 110
MsG0780040470.01.T01 MTR_5g012010 83.929 56 8 1 435 489 10 65 3.02e-19 89.7
MsG0780040470.01.T01 MTR_4g071360 76.744 43 9 1 564 606 63 104 1.82e-15 74.3
MsG0780040470.01.T01 MTR_1g115215 34.906 106 63 2 263 363 588 692 1.21e-11 68.6
MsG0780040470.01.T01 MTR_2g012830 37.624 101 58 1 268 363 848 948 3.12e-11 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040470.01.T01 AT5G05130 56.757 259 95 4 1 257 63 306 2.27e-91 301
MsG0780040470.01.T01 AT5G05130 52.448 143 65 2 243 385 473 612 2.72e-38 152
MsG0780040470.01.T01 AT5G22750 27.168 173 118 2 246 412 612 782 1.61e-13 74.7
MsG0780040470.01.T01 AT1G50410 32.500 120 73 2 252 363 517 636 5.50e-12 69.7
MsG0780040470.01.T01 AT1G50410 32.500 120 73 2 252 363 517 636 6.43e-12 69.3
MsG0780040470.01.T01 AT1G50410 32.500 120 73 2 252 363 517 636 6.43e-12 69.3
MsG0780040470.01.T01 AT1G50410 32.500 120 73 2 252 363 517 636 6.43e-12 69.3

Find 155 sgRNAs with CRISPR-Local

Find 538 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTATCAAAGTAGCGATTT+TGG 0.258385 7:-78038153 None:intergenic
TTTGCGGACGGGATGGGATT+AGG 0.262324 7:+78035567 MsG0780040470.01.T01:CDS
CTGATGATTTACCGCCGTTT+TGG 0.262594 7:+78035463 MsG0780040470.01.T01:CDS
TCATCAGTCTTGAAAGATTC+AGG 0.265059 7:-78038083 None:intergenic
CCCCACCAATGCAGTGTCTT+TGG 0.276924 7:-78036398 None:intergenic
TTGGTAGATGACCTTACTTC+TGG 0.293841 7:-78038134 None:intergenic
TTGGAGTCGTATGGGTTTAA+AGG 0.302377 7:-78034943 None:intergenic
TGACAAGTCTCAACAATCTT+AGG 0.342045 7:-78036427 None:intergenic
AAGATCTTCATTGACCCATT+TGG 0.343443 7:+78040072 MsG0780040470.01.T01:CDS
TTGCGGACGGGATGGGATTA+GGG 0.354547 7:+78035568 MsG0780040470.01.T01:CDS
TACTGTTCCTCCGAGGCGTC+GGG 0.359411 7:+78041413 MsG0780040470.01.T01:CDS
AACTGATATGAATCTGTTCT+TGG 0.361438 7:+78040096 MsG0780040470.01.T01:CDS
CGAGTTTGAAAATTTGATCT+AGG 0.366948 7:-78035314 None:intergenic
CGGTTCAGAAACTAGGGTTT+TGG 0.367071 7:-78035355 None:intergenic
GGCACCGGTACCGGCATGTC+TGG 0.371562 7:-78041751 None:intergenic
TGCGCGGCCGGAGCCTCTCT+CGG 0.374792 7:+78035536 MsG0780040470.01.T01:CDS
TCTATGTCTTCTTGCTGATC+TGG 0.375600 7:-78041483 None:intergenic
TTGCCTACGCGCTCTCCTAC+TGG 0.379670 7:-78041373 None:intergenic
AGAGAAAGTAAGAACAGAAA+TGG 0.386214 7:+78040126 MsG0780040470.01.T01:CDS
CGTCTAATACTCAGCGCGTA+AGG 0.390625 7:+78041334 MsG0780040470.01.T01:CDS
AGGAGCGAGAGCGGCGGCGA+CGG 0.400378 7:-78035019 None:intergenic
TGCCATTCCTCACTCCCTTT+CGG 0.404251 7:-78041827 None:intergenic
GGTTTAACGGTTCAGAAACT+AGG 0.413284 7:-78035362 None:intergenic
GTCAGCGCGTGTTTCTTTAA+CGG 0.413934 7:-78035244 None:intergenic
TTGTTAGAGCGAGTGTTTGT+GGG 0.416623 7:-78035081 None:intergenic
GGAGCTTGAGGAGGAGCTGC+AGG 0.426029 7:+78041548 MsG0780040470.01.T01:CDS
TACTTTGATAAAGCTTCTTA+CGG 0.433519 7:+78038163 MsG0780040470.01.T01:CDS
GACCGGGATGAGTCGATTGC+AGG 0.436131 7:+78036135 MsG0780040470.01.T01:CDS
ATGCTAGAAGGAGGGTTTAA+CGG 0.438865 7:-78035375 None:intergenic
GATTCATATCAGTTTCCAAA+TGG 0.439557 7:-78040087 None:intergenic
AAATGAAAAGTGGGAAGAAA+AGG 0.441643 7:+78035635 MsG0780040470.01.T01:CDS
GATGAAGTTGATTTAGAAGC+TGG 0.444831 7:+78040019 MsG0780040470.01.T01:CDS
TCTGGCTGCTGCTCGACATC+AGG 0.446727 7:-78041465 None:intergenic
TTAACGTTGCTATCGTTGAT+TGG 0.448424 7:+78035597 MsG0780040470.01.T01:CDS
CATGGTGTGGAGGTAGTAGA+TGG 0.448559 7:+78041682 MsG0780040470.01.T01:CDS
TAAAGCTTCTTACGGAATCA+AGG 0.449329 7:+78038171 MsG0780040470.01.T01:CDS
TTGATGGCGTTGGAGTCGTA+TGG 0.450151 7:-78034952 None:intergenic
ACTCAGCGCGTAAGGGAGGC+AGG 0.452895 7:+78041342 MsG0780040470.01.T01:CDS
TCTGATTTAATAATGCTAGA+AGG 0.452942 7:-78035387 None:intergenic
ATCCCTCCCGAGAGAGGCTC+CGG 0.453624 7:-78035543 None:intergenic
GCGCGGCCGGAGCCTCTCTC+GGG 0.458130 7:+78035537 MsG0780040470.01.T01:CDS
GGTCTCTGTGGCACCGGTAC+CGG 0.460058 7:-78041760 None:intergenic
GGGATATTTGCGGACGGGAT+GGG 0.460336 7:+78035561 MsG0780040470.01.T01:CDS
CGTATGGGTTTAAAGGTTCA+CGG 0.463807 7:-78034936 None:intergenic
GTACTGTTCCTCCGAGGCGT+CGG 0.467201 7:+78041412 MsG0780040470.01.T01:CDS
TTGAGTGTTGAGGACTTTGA+TGG 0.469309 7:-78034968 None:intergenic
ATTCATATCAGTTTCCAAAT+GGG 0.473520 7:-78040086 None:intergenic
CACTACTCCGGCACCATCAC+CGG 0.474897 7:+78034892 MsG0780040470.01.T01:CDS
ATACGCTGCAACTCCACATC+AGG 0.478821 7:-78041516 None:intergenic
GAGGATTTCGCGGCCGGTGA+TGG 0.480465 7:-78034905 None:intergenic
TAGAATCATACTTAGTATAG+TGG 0.481589 7:-78036557 None:intergenic
TAAGCCGAGGATTTCGCGGC+CGG 0.485440 7:-78034911 None:intergenic
CCCTCTTTCTCCTCCCAAAA+CGG 0.487569 7:-78035477 None:intergenic
GTTCAGCGACCTCTTAATCA+AGG 0.488325 7:+78036106 MsG0780040470.01.T01:CDS
TTCGCGGCCGGTGATGGTGC+CGG 0.488545 7:-78034899 None:intergenic
TAAGAGTTATTGGCAAAGCT+TGG 0.490157 7:+78036084 MsG0780040470.01.T01:intron
GTTGCAGCGTATGGAGGAGC+AGG 0.493532 7:+78041527 MsG0780040470.01.T01:CDS
GGATTAAGCCGAGGATTTCG+CGG 0.499045 7:-78034915 None:intergenic
GTTGAGGACTTTGATGGCGT+TGG 0.504215 7:-78034962 None:intergenic
TCTTCCAGACATGCCGGTAC+CGG 0.511333 7:+78041747 MsG0780040470.01.T01:CDS
ACTGTATGATGAGGTTAAAG+AGG 0.511501 7:+78036477 MsG0780040470.01.T01:CDS
TATGAATCTGTTCTTGGAAG+AGG 0.513466 7:+78040102 MsG0780040470.01.T01:CDS
AGCGCTGATTCTGTAACAAC+CGG 0.513980 7:+78035273 MsG0780040470.01.T01:CDS
AACCAAAGACACTGCATTGG+TGG 0.514527 7:+78036396 MsG0780040470.01.T01:CDS
TGCTGTGATGAGAAGCGGTC+TGG 0.514854 7:+78041802 MsG0780040470.01.T01:CDS
CGCGTTCGATGTAACCGACT+TGG 0.516483 7:-78034996 None:intergenic
TCTGGTGTGCACGGCTCAGT+AGG 0.518306 7:-78038116 None:intergenic
AGGGATATTTGCGGACGGGA+TGG 0.519906 7:+78035560 MsG0780040470.01.T01:CDS
TGATGGCGTTGGAGTCGTAT+GGG 0.521093 7:-78034951 None:intergenic
CGGCCGGAGCCTCTCTCGGG+AGG 0.523817 7:+78035540 MsG0780040470.01.T01:CDS
ATTGTTAGAGCGAGTGTTTG+TGG 0.524806 7:-78035082 None:intergenic
TATGAATCTGACAAGGGATA+CGG 0.528146 7:-78035113 None:intergenic
ATCACCGGCCGCGAAATCCT+CGG 0.528188 7:+78034907 MsG0780040470.01.T01:CDS
GTCGAGGAGAGGAGCGAGAG+CGG 0.529382 7:-78035028 None:intergenic
AGCCGTGCACACCAGAAGTA+AGG 0.529401 7:+78038123 MsG0780040470.01.T01:CDS
TGATGTGGTCTCTGTGGCAC+CGG 0.530317 7:-78041766 None:intergenic
TTCGTAATGGCCAACATCGT+CGG 0.530765 7:+78034862 None:intergenic
GACCTTACTTCTGGTGTGCA+CGG 0.530787 7:-78038125 None:intergenic
GCGTGTTTCTTTAACGGCGG+CGG 0.532351 7:-78035238 None:intergenic
GAGAAAGTAAGAACAGAAAT+GGG 0.532673 7:+78040127 MsG0780040470.01.T01:CDS
CTTGGAGTGTTTGAGTGTTG+AGG 0.532776 7:-78034978 None:intergenic
TGATGTGGAGTTGCAGCGTA+TGG 0.534755 7:+78041518 MsG0780040470.01.T01:CDS
GAAGCGGTCTGGTGCCGAAA+GGG 0.538812 7:+78041813 MsG0780040470.01.T01:CDS
TTATCAAACTAATGCGCGGC+CGG 0.540005 7:+78035524 MsG0780040470.01.T01:CDS
GTCTAATACTCAGCGCGTAA+GGG 0.541575 7:+78041335 MsG0780040470.01.T01:CDS
TCAGCAAGAAGACATAGAGC+AGG 0.543564 7:+78041488 MsG0780040470.01.T01:CDS
ATACGAAATGAAATGAACAT+TGG 0.545733 7:-78035187 None:intergenic
GTGTTTAATGCCGACGATGT+TGG 0.546373 7:-78034872 None:intergenic
GAGAGCGCGTAGGCAACAGA+TGG 0.549926 7:+78041380 MsG0780040470.01.T01:CDS
GTTTAACGGTTCAGAAACTA+GGG 0.551674 7:-78035361 None:intergenic
GGCCGGAGCCTCTCTCGGGA+GGG 0.552185 7:+78035541 MsG0780040470.01.T01:CDS
CATCAGTCTTGAAAGATTCA+GGG 0.552635 7:-78038082 None:intergenic
CTTAATCAAGGAAAACAGAC+CGG 0.556797 7:+78036118 MsG0780040470.01.T01:CDS
ACCAAAGACACTGCATTGGT+GGG 0.558464 7:+78036397 MsG0780040470.01.T01:CDS
TACCTGCAATCGACTCATCC+CGG 0.558747 7:-78036137 None:intergenic
GCAAATATCCCTCCCGAGAG+AGG 0.560537 7:-78035549 None:intergenic
TATGGAGGAGCAGGAGCTTG+AGG 0.561892 7:+78041536 MsG0780040470.01.T01:CDS
CCTCTAGCACCCCGACGCCT+CGG 0.565434 7:-78041423 None:intergenic
AGCGCGTGTTTCTTTAACGG+CGG 0.569465 7:-78035241 None:intergenic
AAAGCTTCTTACGGAATCAA+GGG 0.574359 7:+78038172 MsG0780040470.01.T01:CDS
ATTTAATAATGCTAGAAGGA+GGG 0.574890 7:-78035383 None:intergenic
GATTTAATAATGCTAGAAGG+AGG 0.575245 7:-78035384 None:intergenic
CGGGAGGGATATTTGCGGAC+GGG 0.579950 7:+78035556 MsG0780040470.01.T01:CDS
GAGGAGAGGAGCGAGAGCGG+CGG 0.582518 7:-78035025 None:intergenic
CCGAGGCGTCGGGGTGCTAG+AGG 0.591259 7:+78041423 MsG0780040470.01.T01:CDS
GCGAGTGTTTGTGGGGACGA+TGG 0.593250 7:-78035073 None:intergenic
GACTGCAGTCCATGGTGTGG+AGG 0.594349 7:+78041672 MsG0780040470.01.T01:intron
AGCGCGTAGGCAACAGATGG+AGG 0.599269 7:+78041383 MsG0780040470.01.T01:CDS
TAATACTCAGCGCGTAAGGG+AGG 0.601619 7:+78041338 MsG0780040470.01.T01:CDS
AGAAGCGGTCTGGTGCCGAA+AGG 0.602323 7:+78041812 MsG0780040470.01.T01:CDS
ATTTATGCTGTGATGAGAAG+CGG 0.604896 7:+78041797 MsG0780040470.01.T01:CDS
TGTTACAGAATCAGCGCTGA+CGG 0.605972 7:-78035268 None:intergenic
CTCAGCGCGTAAGGGAGGCA+GGG 0.608325 7:+78041343 MsG0780040470.01.T01:CDS
CAAGTCTCAACAATCTTAGG+TGG 0.610314 7:-78036424 None:intergenic
TGTTAGAGCGAGTGTTTGTG+GGG 0.610967 7:-78035080 None:intergenic
CATGATTCTTCCAGACATGC+CGG 0.611169 7:+78041741 MsG0780040470.01.T01:CDS
ATGATGTGAGCGTCGAGGAG+AGG 0.613070 7:-78035039 None:intergenic
GCGAAGATATGAATCTGACA+AGG 0.618949 7:-78035120 None:intergenic
AGGCAGGGCATGCTTCCAGT+AGG 0.621280 7:+78041358 MsG0780040470.01.T01:CDS
AAGAACCAAAGACACTGCAT+TGG 0.621297 7:+78036393 MsG0780040470.01.T01:CDS
TTAATCAAGGAAAACAGACC+GGG 0.621325 7:+78036119 MsG0780040470.01.T01:CDS
AGAGCAGGAGATGCCTGATG+TGG 0.621665 7:+78041503 MsG0780040470.01.T01:CDS
GGTCTTTGATGTGGTCTCTG+TGG 0.624832 7:-78041772 None:intergenic
CTAGCACCCCGACGCCTCGG+AGG 0.627649 7:-78041420 None:intergenic
ATCAGTCTTGAAAGATTCAG+GGG 0.629623 7:-78038081 None:intergenic
GAGCTTGAGGAGGAGCTGCA+GGG 0.631189 7:+78041549 MsG0780040470.01.T01:CDS
GGAGGAGCAGGAGCTTGAGG+AGG 0.632076 7:+78041539 MsG0780040470.01.T01:CDS
TTCTCATCACAGCATAAATG+TGG 0.634144 7:-78041793 None:intergenic
CCAAAGACACTGCATTGGTG+GGG 0.634211 7:+78036398 MsG0780040470.01.T01:CDS
TCTCTCGGGAGGGATATTTG+CGG 0.634363 7:+78035551 MsG0780040470.01.T01:CDS
TCGGGAGGGATATTTGCGGA+CGG 0.634657 7:+78035555 MsG0780040470.01.T01:CDS
TCTGGTGCCGAAAGGGAGTG+AGG 0.635832 7:+78041820 MsG0780040470.01.T01:CDS
AGGCAACAGATGGAGGCTGA+AGG 0.637837 7:+78041390 MsG0780040470.01.T01:CDS
TCATGCGTGGATGAGACACC+TGG 0.650338 7:-78041723 None:intergenic
GTCGGCATTAAACACTACTC+CGG 0.651569 7:+78034880 MsG0780040470.01.T01:CDS
AACACTCAAACACTCCAAGT+CGG 0.656074 7:+78034982 MsG0780040470.01.T01:CDS
AAGGTTCACGGATTAAGCCG+AGG 0.656621 7:-78034924 None:intergenic
AGAGACTGCAGTCCATGGTG+TGG 0.659301 7:+78041669 MsG0780040470.01.T01:intron
ACTGTTCCTCCGAGGCGTCG+GGG 0.659883 7:+78041414 MsG0780040470.01.T01:CDS
AGACACGACTTGAAATCCAA+AGG 0.665373 7:-78036616 None:intergenic
AGAACGTAAACTGTATGATG+AGG 0.665949 7:+78036468 MsG0780040470.01.T01:CDS
CGAAGATATGAATCTGACAA+GGG 0.668320 7:-78035119 None:intergenic
TAGTAGATGGATACATCGAG+TGG 0.668862 7:+78041695 MsG0780040470.01.T01:CDS
TGTGGAGTTGCAGCGTATGG+AGG 0.670747 7:+78041521 MsG0780040470.01.T01:CDS
CATCTACTACCTCCACACCA+TGG 0.670986 7:-78041681 None:intergenic
CATAAATGTGGTCTTTGATG+TGG 0.676384 7:-78041781 None:intergenic
TGGGGACGATGGCTTCGACG+TGG 0.692828 7:-78035062 None:intergenic
CGTGGATGATGTGAGCGTCG+AGG 0.693865 7:-78035044 None:intergenic
CTGAAGGTACTGTTCCTCCG+AGG 0.706637 7:+78041406 MsG0780040470.01.T01:CDS
CGAATTATCAAACTAATGCG+CGG 0.709330 7:+78035520 MsG0780040470.01.T01:CDS
TCTTTCTCCTCCCAAAACGG+CGG 0.713897 7:-78035474 None:intergenic
GAATGAGAAAGAGTAAACGA+AGG 0.718846 7:-78035216 None:intergenic
CTTCCAGTAGGAGAGCGCGT+AGG 0.725107 7:+78041370 MsG0780040470.01.T01:CDS
TCAGTCTTGAAAGATTCAGG+GGG 0.730552 7:-78038080 None:intergenic
ATGTCTGGAAGAATCATGCG+TGG 0.751258 7:-78041736 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATTAATTAATAAAAAAA+TGG - Chr7:78039863-78039882 None:intergenic 0.0%
!! CCTATATTTATTTAATAAAA+AGG + Chr7:78039073-78039092 MsG0780040470.01.T01:intron 10.0%
!!! AGTTTTTAATAAATAATTGT+TGG + Chr7:78037309-78037328 MsG0780040470.01.T01:intron 10.0%
!!! CCTTTTTATTAAATAAATAT+AGG - Chr7:78039076-78039095 None:intergenic 10.0%
!! AAAATGTAAAACTGTAAAAA+TGG - Chr7:78040956-78040975 None:intergenic 15.0%
!! AAATGTAAAACTGTAAAAAT+GGG - Chr7:78040955-78040974 None:intergenic 15.0%
!! AACATAATGTATTATGAATT+AGG - Chr7:78036821-78036840 None:intergenic 15.0%
!! ATAAAATGAAAAATGAAAAG+TGG + Chr7:78035625-78035644 MsG0780040470.01.T01:CDS 15.0%
!! TAAAATGAAAAATGAAAAGT+GGG + Chr7:78035626-78035645 MsG0780040470.01.T01:CDS 15.0%
!! TATAATTTACTTAACTTTGT+GGG - Chr7:78039134-78039153 None:intergenic 15.0%
!! TTATTCCAGAATATATATTT+CGG - Chr7:78040871-78040890 None:intergenic 15.0%
!!! AAATATCATTTTATTGGTTA+CGG + Chr7:78037053-78037072 MsG0780040470.01.T01:intron 15.0%
!!! CCAATAAAATGATATTTTTT+AGG - Chr7:78037050-78037069 None:intergenic 15.0%
!!! CCTAAAAAATATCATTTTAT+TGG + Chr7:78037047-78037066 MsG0780040470.01.T01:intron 15.0%
!!! CCTTCTATTTTTTTAATAAA+GGG + Chr7:78037194-78037213 MsG0780040470.01.T01:intron 15.0%
!!! GTTTTTACTATTATTATTAC+CGG - Chr7:78035295-78035314 None:intergenic 15.0%
!!! TCCTTCTATTTTTTTAATAA+AGG + Chr7:78037193-78037212 MsG0780040470.01.T01:intron 15.0%
!!! TTATGTAATTAGTCTTTTAT+AGG - Chr7:78037003-78037022 None:intergenic 15.0%
!!! TTTTTATGATGTAATACAAA+GGG - Chr7:78038902-78038921 None:intergenic 15.0%
!!! TTTTTTATGATGTAATACAA+AGG - Chr7:78038903-78038922 None:intergenic 15.0%
!! AAAAACAAAACAAAAAGTTG+GGG + Chr7:78039096-78039115 MsG0780040470.01.T01:intron 20.0%
!! AAACCAAAAAACAGAATAAT+TGG - Chr7:78036287-78036306 None:intergenic 20.0%
!! AATGTAAAACTGTAAAAATG+GGG - Chr7:78040954-78040973 None:intergenic 20.0%
!! ACAATATCATCAAATAGAAT+TGG + Chr7:78039571-78039590 MsG0780040470.01.T01:intron 20.0%
!! ACTTAAAAAGAAAAACCAAA+AGG - Chr7:78039657-78039676 None:intergenic 20.0%
!! ACTTTAAACATTAAGAAATC+CGG - Chr7:78038820-78038839 None:intergenic 20.0%
!! AGTTAAGTAAATTATAGGTA+TGG + Chr7:78039138-78039157 MsG0780040470.01.T01:intron 20.0%
!! CAATAACTCTTAATAGAAAA+CGG - Chr7:78036076-78036095 None:intergenic 20.0%
!! CACAAAGTTAAGTAAATTAT+AGG + Chr7:78039133-78039152 MsG0780040470.01.T01:intron 20.0%
!! CCCTTTATTAAAAAAATAGA+AGG - Chr7:78037197-78037216 None:intergenic 20.0%
!! CTATAATTTACTTAACTTTG+TGG - Chr7:78039135-78039154 None:intergenic 20.0%
!! GAAAAACAAAACAAAAAGTT+GGG + Chr7:78039095-78039114 MsG0780040470.01.T01:intron 20.0%
!! TAAGAAACATAGATAATATG+AGG - Chr7:78036870-78036889 None:intergenic 20.0%
!! TCAATAGTAATGAAAATGTA+TGG - Chr7:78037768-78037787 None:intergenic 20.0%
!! TTAATAAAAAAATGGAAGTG+TGG - Chr7:78039855-78039874 None:intergenic 20.0%
!! TTAGGCATAGTATAAAAAAA+GGG + Chr7:78038876-78038895 MsG0780040470.01.T01:intron 20.0%
!! TTATAACAAATTATAGTCAC+CGG + Chr7:78038798-78038817 MsG0780040470.01.T01:intron 20.0%
!! TTGAAGGTTTATATGTATTA+TGG + Chr7:78035771-78035790 MsG0780040470.01.T01:intron 20.0%
!! TTTATATGTATTATGGTGAT+AGG + Chr7:78035778-78035797 MsG0780040470.01.T01:intron 20.0%
!!! AATTATTCTGTTTTTTGGTT+TGG + Chr7:78036286-78036305 MsG0780040470.01.T01:intron 20.0%
!!! AATTTGTTACTTTCAATTGT+TGG + Chr7:78036925-78036944 MsG0780040470.01.T01:intron 20.0%
!!! ATTCATTTTATGTGTATGTA+TGG + Chr7:78037578-78037597 MsG0780040470.01.T01:intron 20.0%
!!! ATTTCTTGATTTAGGATAAA+TGG + Chr7:78040444-78040463 MsG0780040470.01.T01:intron 20.0%
!!! ATTTGTTACTTTCAATTGTT+GGG + Chr7:78036926-78036945 MsG0780040470.01.T01:intron 20.0%
!!! TAAATAATTGTTGGTTTTCA+AGG + Chr7:78037318-78037337 MsG0780040470.01.T01:intron 20.0%
!!! TTCTTAATGTTTAAAGTCAT+TGG + Chr7:78038823-78038842 MsG0780040470.01.T01:intron 20.0%
! AAAACAAAACAAAAAGTTGG+GGG + Chr7:78039097-78039116 MsG0780040470.01.T01:intron 25.0%
! AAAATGAAAAAAGCCATAAG+AGG - Chr7:78036050-78036069 None:intergenic 25.0%
! AAATTAATCTATGGAAGAGA+AGG - Chr7:78040296-78040315 None:intergenic 25.0%
! AAATTCCGGATTATATAATC+CGG + Chr7:78040897-78040916 MsG0780040470.01.T01:intron 25.0%
! AACAGTTTATCAACTGAAAT+CGG - Chr7:78037422-78037441 None:intergenic 25.0%
! AATATCGTATTATAGTGACT+TGG - Chr7:78038998-78039017 None:intergenic 25.0%
! AATTAATCTATGGAAGAGAA+GGG - Chr7:78040295-78040314 None:intergenic 25.0%
! AATTCAATTCATTGAGCAAA+AGG - Chr7:78036238-78036257 None:intergenic 25.0%
! AATTGCTGCAAACATTAATT+AGG + Chr7:78037878-78037897 MsG0780040470.01.T01:intron 25.0%
! AGCATGTAATTACAATATCT+GGG - Chr7:78037953-78037972 None:intergenic 25.0%
! ATACGAAATGAAATGAACAT+TGG - Chr7:78035190-78035209 None:intergenic 25.0%
! ATATCGTATTATAGTGACTT+GGG - Chr7:78038997-78039016 None:intergenic 25.0%
! ATGATAACATTTAGCCATTT+AGG + Chr7:78036709-78036728 MsG0780040470.01.T01:intron 25.0%
! ATGTAAAACTGTAAAAATGG+GGG - Chr7:78040953-78040972 None:intergenic 25.0%
! ATTAGATCAAACTTGGTTAA+TGG - Chr7:78040250-78040269 None:intergenic 25.0%
! ATTCATATCAGTTTCCAAAT+GGG - Chr7:78040089-78040108 None:intergenic 25.0%
! ATTTAATAATGCTAGAAGGA+GGG - Chr7:78035386-78035405 None:intergenic 25.0%
! CAATGATTATCAAAGAGAAT+TGG + Chr7:78039492-78039511 MsG0780040470.01.T01:intron 25.0%
! CACGTAAAGAAATTAATCTA+TGG - Chr7:78040305-78040324 None:intergenic 25.0%
! CCAAGTTTGATCTAATTTAA+TGG + Chr7:78040254-78040273 MsG0780040470.01.T01:intron 25.0%
! CCATTAAATTAGATCAAACT+TGG - Chr7:78040257-78040276 None:intergenic 25.0%
! CTTAGGCATAGTATAAAAAA+AGG + Chr7:78038875-78038894 MsG0780040470.01.T01:intron 25.0%
! CTTCTGTAACATTCAAATTA+GGG - Chr7:78041308-78041327 None:intergenic 25.0%
! GGAAAAACAAAACAAAAAGT+TGG + Chr7:78039094-78039113 MsG0780040470.01.T01:intron 25.0%
! GGAAAAATCAAGAATTCAAT+TGG + Chr7:78039404-78039423 MsG0780040470.01.T01:intron 25.0%
! TACTTTGATAAAGCTTCTTA+CGG + Chr7:78038163-78038182 MsG0780040470.01.T01:CDS 25.0%
! TAGAATCATACTTAGTATAG+TGG - Chr7:78036560-78036579 None:intergenic 25.0%
! TATACCTAAAACAATTTACC+TGG + Chr7:78039610-78039629 MsG0780040470.01.T01:intron 25.0%
! TCTATTCTCCTAAAACAAAA+CGG - Chr7:78038656-78038675 None:intergenic 25.0%
! TCTGATTTAATAATGCTAGA+AGG - Chr7:78035390-78035409 None:intergenic 25.0%
! TGGAATAACTATGAAAATTC+CGG + Chr7:78040883-78040902 MsG0780040470.01.T01:intron 25.0%
!! AAAGAGGAAAATAATGGAAA+TGG - Chr7:78040761-78040780 None:intergenic 25.0%
!! AAATCATGTCATATGCTTTT+TGG + Chr7:78039362-78039381 MsG0780040470.01.T01:intron 25.0%
!! AGTATTTTACTTGTGTCAAT+AGG + Chr7:78040668-78040687 MsG0780040470.01.T01:intron 25.0%
!! AGTATTTTACTTGTGTCAAT+AGG - Chr7:78040687-78040668 None:intergenic 25.0%
!! CATTGCTAGTTTCATAAAAA+AGG - Chr7:78036692-78036711 None:intergenic 25.0%
!! CCATTATTTTCCTCTTTATT+GGG + Chr7:78040764-78040783 MsG0780040470.01.T01:intron 25.0%
!! CGTTTTCTATTAAGAGTTAT+TGG + Chr7:78036074-78036093 MsG0780040470.01.T01:intron 25.0%
!! GGTTTTACTTACTCTTTTTT+GGG + Chr7:78036341-78036360 MsG0780040470.01.T01:intron 25.0%
!! TATTTGACACACGATATTTT+GGG - Chr7:78039045-78039064 None:intergenic 25.0%
!! TCCATTATTTTCCTCTTTAT+TGG + Chr7:78040763-78040782 MsG0780040470.01.T01:intron 25.0%
!! TTTTCTTCAACTGATATTGA+AGG + Chr7:78036640-78036659 MsG0780040470.01.T01:CDS 25.0%
!!! ATCTCACTTATGTTTTTTGT+TGG + Chr7:78036735-78036754 MsG0780040470.01.T01:intron 25.0%
!!! ATTTTTTACTTGCATGTGTA+GGG + Chr7:78036187-78036206 MsG0780040470.01.T01:intron 25.0%
!!! CTTTTTTTATACTATGCCTA+AGG - Chr7:78038877-78038896 None:intergenic 25.0%
!!! TGACCAATTATTCTGTTTTT+TGG + Chr7:78036281-78036300 MsG0780040470.01.T01:intron 25.0%
!!! TGGTTTTACTTACTCTTTTT+TGG + Chr7:78036340-78036359 MsG0780040470.01.T01:intron 25.0%
!!! TTATGACTTTTTTCCTCTTA+TGG + Chr7:78036034-78036053 MsG0780040470.01.T01:intron 25.0%
!!! TTTGTTACTTTCAATTGTTG+GGG + Chr7:78036927-78036946 MsG0780040470.01.T01:intron 25.0%
!!! TTTTTGTTTGTGTGTTAGTT+GGG + Chr7:78040735-78040754 MsG0780040470.01.T01:intron 25.0%
AAAACAAGTCAAGAAACCAT+GGG - Chr7:78039951-78039970 None:intergenic 30.0%
AAAATGTATGGTTCACTGTA+TGG - Chr7:78037756-78037775 None:intergenic 30.0%
AAACAAAACAAAAAGTTGGG+GGG + Chr7:78039098-78039117 MsG0780040470.01.T01:intron 30.0%
AAACATCTGCTGCAATATAT+TGG - Chr7:78039902-78039921 None:intergenic 30.0%
AAACTTGGTTAATGGTGAAT+TGG - Chr7:78040242-78040261 None:intergenic 30.0%
AAAGAAGCAAAACAACATTC+TGG - Chr7:78041242-78041261 None:intergenic 30.0%
AAATGAAAAGTGGGAAGAAA+AGG + Chr7:78035635-78035654 MsG0780040470.01.T01:CDS 30.0%
AACTGATATGAATCTGTTCT+TGG + Chr7:78040096-78040115 MsG0780040470.01.T01:CDS 30.0%
ACATAGATAATATGAGGTGT+TGG - Chr7:78036864-78036883 None:intergenic 30.0%
AGAAAAAGGTTGAAGGTAAT+TGG + Chr7:78040377-78040396 MsG0780040470.01.T01:intron 30.0%
AGAAGGAAAAAAAACAGCAA+CGG - Chr7:78037180-78037199 None:intergenic 30.0%
AGAGAAAGTAAGAACAGAAA+TGG + Chr7:78040126-78040145 MsG0780040470.01.T01:CDS 30.0%
AGTAACACCCAAAAAAAATG+TGG - Chr7:78040795-78040814 None:intergenic 30.0%
ATAAGTGAGATGTACCTAAA+TGG - Chr7:78036726-78036745 None:intergenic 30.0%
ATATGTATTATGGTGATAGG+AGG + Chr7:78035781-78035800 MsG0780040470.01.T01:intron 30.0%
ATCCAAAAATCTGTAGTCTA+TGG + Chr7:78039250-78039269 MsG0780040470.01.T01:intron 30.0%
ATGTAATTACAATATCTGGG+GGG - Chr7:78037950-78037969 None:intergenic 30.0%
ATGTCCTTAACAACTTAACT+CGG + Chr7:78037528-78037547 MsG0780040470.01.T01:intron 30.0%
ATTAATGTTTGCAGCAATTC+AGG - Chr7:78037877-78037896 None:intergenic 30.0%
ATTGTCCGGATTATATAATC+CGG - Chr7:78040905-78040924 None:intergenic 30.0%
CAACAAATCTTGTCCAAATT+TGG + Chr7:78041039-78041058 MsG0780040470.01.T01:intron 30.0%
CAGAAATGAAATATGTGACA+AGG - Chr7:78037093-78037112 None:intergenic 30.0%
CAGCATGTAATTACAATATC+TGG - Chr7:78037954-78037973 None:intergenic 30.0%
CATGTAATTACAATATCTGG+GGG - Chr7:78037951-78037970 None:intergenic 30.0%
CCCAATAAAGAGGAAAATAA+TGG - Chr7:78040767-78040786 None:intergenic 30.0%
CCTAATTTGAATGTTACAGA+AGG + Chr7:78041306-78041325 MsG0780040470.01.T01:intron 30.0%
CCTTCTGTAACATTCAAATT+AGG - Chr7:78041309-78041328 None:intergenic 30.0%
CGAGTTTGAAAATTTGATCT+AGG - Chr7:78035317-78035336 None:intergenic 30.0%
GAAAAAGGTTGAAGGTAATT+GGG + Chr7:78040378-78040397 MsG0780040470.01.T01:intron 30.0%
GACATTAATATTAGATGAGC+TGG + Chr7:78037674-78037693 MsG0780040470.01.T01:intron 30.0%
GAGAAAGTAAGAACAGAAAT+GGG + Chr7:78040127-78040146 MsG0780040470.01.T01:CDS 30.0%
GAGACATGTATTAGTTATAG+TGG + Chr7:78038947-78038966 MsG0780040470.01.T01:intron 30.0%
GAGCAAAAAAACTCCAAATT+TGG - Chr7:78041055-78041074 None:intergenic 30.0%
GAGTGCAAATTTCTTGATTT+AGG + Chr7:78040436-78040455 MsG0780040470.01.T01:intron 30.0%
GATTCATATCAGTTTCCAAA+TGG - Chr7:78040090-78040109 None:intergenic 30.0%
GATTTAATAATGCTAGAAGG+AGG - Chr7:78035387-78035406 None:intergenic 30.0%
GCATGTAATTACAATATCTG+GGG - Chr7:78037952-78037971 None:intergenic 30.0%
TAAAACAAGTCAAGAAACCA+TGG - Chr7:78039952-78039971 None:intergenic 30.0%
TAAGCGCTTGTTTGTTTATA+TGG + Chr7:78036320-78036339 MsG0780040470.01.T01:intron 30.0%
TACGATCAAGAATGTTAATG+CGG + Chr7:78035935-78035954 MsG0780040470.01.T01:intron 30.0%
TATCGTATTATAGTGACTTG+GGG - Chr7:78038996-78039015 None:intergenic 30.0%
TCAGAAAAGCAATATTCTAG+CGG + Chr7:78040564-78040583 MsG0780040470.01.T01:intron 30.0%
TCATAAGAACCATTCTGAAT+AGG - Chr7:78036020-78036039 None:intergenic 30.0%
TCCAAAAATCTGTAGTCTAT+GGG + Chr7:78039251-78039270 MsG0780040470.01.T01:intron 30.0%
TCCAGAATATATATTTCGGA+GGG - Chr7:78040867-78040886 None:intergenic 30.0%
TGATTTATGTTCATGAAGAG+AGG + Chr7:78040216-78040235 MsG0780040470.01.T01:intron 30.0%
TGCTTAGCAAAAATTATGCA+TGG - Chr7:78037839-78037858 None:intergenic 30.0%
TGTAAAACTGTAAAAATGGG+GGG - Chr7:78040952-78040971 None:intergenic 30.0%
TTAATGTTTGCAGCAATTCA+GGG - Chr7:78037876-78037895 None:intergenic 30.0%
TTAATTAGGATGCTACAAGA+TGG + Chr7:78037892-78037911 MsG0780040470.01.T01:intron 30.0%
TTCATAAAAAAGGTCATTGC+TGG - Chr7:78036682-78036701 None:intergenic 30.0%
TTCCAGAATATATATTTCGG+AGG - Chr7:78040868-78040887 None:intergenic 30.0%
TTGACTACTTATGCTACATT+GGG + Chr7:78035842-78035861 MsG0780040470.01.T01:intron 30.0%
TTTACTTAACTTTGTGGGTT+AGG - Chr7:78039129-78039148 None:intergenic 30.0%
! ATAAAAAAATGGAAGTGTGG+TGG - Chr7:78039852-78039871 None:intergenic 30.0%
! ATGTTTAAAGTCATTGGATC+AGG + Chr7:78038829-78038848 MsG0780040470.01.T01:intron 30.0%
! ATTTGACACACGATATTTTG+GGG - Chr7:78039044-78039063 None:intergenic 30.0%
! CTTTATCAAAGTAGCGATTT+TGG - Chr7:78038156-78038175 None:intergenic 30.0%
! GAGTTTTCAGAATACATTCT+CGG - Chr7:78037992-78038011 None:intergenic 30.0%
! GTATTTGACACACGATATTT+TGG - Chr7:78039046-78039065 None:intergenic 30.0%
! TGTTTAAAGTCATTGGATCA+GGG + Chr7:78038830-78038849 MsG0780040470.01.T01:intron 30.0%
! TTCTCCAGGTAAATTGTTTT+AGG - Chr7:78039617-78039636 None:intergenic 30.0%
! TTTAAAACATTGCGTCTTGA+CGG + Chr7:78038280-78038299 MsG0780040470.01.T01:intron 30.0%
! TTTTATATGTCGCAATTGTC+CGG - Chr7:78040919-78040938 None:intergenic 30.0%
!! AATACAACTGATTTTGTAGC+TGG - Chr7:78038206-78038225 None:intergenic 30.0%
!! ATTTGTTGTGTTCGGAATTT+GGG - Chr7:78041027-78041046 None:intergenic 30.0%
!! CACTCTTTTGATTGATACAA+TGG - Chr7:78040421-78040440 None:intergenic 30.0%
!! GTATGTTGGTAATTTGCATA+GGG - Chr7:78040845-78040864 None:intergenic 30.0%
!! GTTTTTGTTTGTGTGTTAGT+TGG + Chr7:78040734-78040753 MsG0780040470.01.T01:intron 30.0%
!!! ATGTTTTTTGTTGGAAGCTT+AGG + Chr7:78036744-78036763 MsG0780040470.01.T01:intron 30.0%
!!! CATTTTTTACTTGCATGTGT+AGG + Chr7:78036186-78036205 MsG0780040470.01.T01:intron 30.0%
!!! TTACTTACTCTTTTTTGGGT+AGG + Chr7:78036345-78036364 MsG0780040470.01.T01:intron 30.0%
!!! TTGTTTTAGGAGAATAGAGT+TGG + Chr7:78038658-78038677 MsG0780040470.01.T01:intron 30.0%
!!! TTTTTTACTTGCATGTGTAG+GGG + Chr7:78036188-78036207 MsG0780040470.01.T01:intron 30.0%
AAAAAGGTCATTGCTGGTAA+AGG - Chr7:78036676-78036695 None:intergenic 35.0%
AAAAGGTCATTGCTGGTAAA+GGG - Chr7:78036675-78036694 None:intergenic 35.0%
AAAAGTGGGAAGAAAAGGTA+GGG + Chr7:78035640-78035659 MsG0780040470.01.T01:intron 35.0%
AAAGCTTCTTACGGAATCAA+GGG + Chr7:78038172-78038191 MsG0780040470.01.T01:CDS 35.0%
AAATACTAAAATGCCTCCAG+CGG - Chr7:78040655-78040674 None:intergenic 35.0%
AAGAAAACAATTACAAGCCG+AGG + Chr7:78038583-78038602 MsG0780040470.01.T01:intron 35.0%
AAGATCTTCATTGACCCATT+TGG + Chr7:78040072-78040091 MsG0780040470.01.T01:CDS 35.0%
ACCCTCCGAAATATATATTC+TGG + Chr7:78040863-78040882 MsG0780040470.01.T01:intron 35.0%
ACTGTATGATGAGGTTAAAG+AGG + Chr7:78036477-78036496 MsG0780040470.01.T01:CDS 35.0%
AGAACGTAAACTGTATGATG+AGG + Chr7:78036468-78036487 MsG0780040470.01.T01:CDS 35.0%
AGAATAACTCAGATTCTGAG+AGG - Chr7:78038055-78038074 None:intergenic 35.0%
AGTTTATCAACTGAAATCGG+AGG - Chr7:78037419-78037438 None:intergenic 35.0%
ATCAGTCTTGAAAGATTCAG+GGG - Chr7:78038084-78038103 None:intergenic 35.0%
ATCCAGAAAAATGGAAGTTG+TGG + Chr7:78040519-78040538 MsG0780040470.01.T01:intron 35.0%
ATCCATTGCTTGTTCTTCAA+CGG - Chr7:78038467-78038486 None:intergenic 35.0%
ATTTATGCTGTGATGAGAAG+CGG + Chr7:78041797-78041816 MsG0780040470.01.T01:CDS 35.0%
CACCCAAAAAAAATGTGGAA+AGG - Chr7:78040790-78040809 None:intergenic 35.0%
CATAAATGTGGTCTTTGATG+TGG - Chr7:78041784-78041803 None:intergenic 35.0%
CATCAGTCTTGAAAGATTCA+GGG - Chr7:78038085-78038104 None:intergenic 35.0%
CCTAATTGATATTCAACCAG+TGG - Chr7:78037445-78037464 None:intergenic 35.0%
CGAAGATATGAATCTGACAA+GGG - Chr7:78035122-78035141 None:intergenic 35.0%
CGAATTATCAAACTAATGCG+CGG + Chr7:78035520-78035539 MsG0780040470.01.T01:CDS 35.0%
CTTAATCAAGGAAAACAGAC+CGG + Chr7:78036118-78036137 MsG0780040470.01.T01:CDS 35.0%
GAATGAGAAAGAGTAAACGA+AGG - Chr7:78035219-78035238 None:intergenic 35.0%
GGACAATTGCGACATATAAA+AGG + Chr7:78040918-78040937 MsG0780040470.01.T01:intron 35.0%
GGTGTACAAATCATGCTATA+TGG + Chr7:78039383-78039402 MsG0780040470.01.T01:intron 35.0%
GTAAAACTGTAAAAATGGGG+GGG - Chr7:78040951-78040970 None:intergenic 35.0%
GTGCAATATTGCACAAGTTA+AGG - Chr7:78037365-78037384 None:intergenic 35.0%
GTGTTCATACCTTTGAACAA+TGG + Chr7:78040487-78040506 MsG0780040470.01.T01:intron 35.0%
GTTGACTACTTATGCTACAT+TGG + Chr7:78035841-78035860 MsG0780040470.01.T01:intron 35.0%
GTTTAACGGTTCAGAAACTA+GGG - Chr7:78035364-78035383 None:intergenic 35.0%
TAAAGCTTCTTACGGAATCA+AGG + Chr7:78038171-78038190 MsG0780040470.01.T01:CDS 35.0%
TAAGAGTTATTGGCAAAGCT+TGG + Chr7:78036084-78036103 MsG0780040470.01.T01:intron 35.0%
TATGAATCTGACAAGGGATA+CGG - Chr7:78035116-78035135 None:intergenic 35.0%
TATGAATCTGTTCTTGGAAG+AGG + Chr7:78040102-78040121 MsG0780040470.01.T01:CDS 35.0%
TCATACCTTTGAACAATGGA+AGG + Chr7:78040491-78040510 MsG0780040470.01.T01:intron 35.0%
TCATCAGTCTTGAAAGATTC+AGG - Chr7:78038086-78038105 None:intergenic 35.0%
TGACAAGTCTCAACAATCTT+AGG - Chr7:78036430-78036449 None:intergenic 35.0%
TGCAGAAAAGAAATTTCCAG+CGG - Chr7:78039810-78039829 None:intergenic 35.0%
TGTAATTACAATATCTGGGG+GGG - Chr7:78037949-78037968 None:intergenic 35.0%
TGTATTGAAACGCAAGTTTG+TGG + Chr7:78037140-78037159 MsG0780040470.01.T01:intron 35.0%
TGTCCTTAACAACTTAACTC+GGG + Chr7:78037529-78037548 MsG0780040470.01.T01:intron 35.0%
TTAAAACATTGCGTCTTGAC+GGG + Chr7:78038281-78038300 MsG0780040470.01.T01:intron 35.0%
TTAACGTTGCTATCGTTGAT+TGG + Chr7:78035597-78035616 MsG0780040470.01.T01:CDS 35.0%
TTAATCAAGGAAAACAGACC+GGG + Chr7:78036119-78036138 MsG0780040470.01.T01:CDS 35.0%
TTCGACATGGATAACTCAAT+TGG + Chr7:78035725-78035744 MsG0780040470.01.T01:intron 35.0%
TTCTCATCACAGCATAAATG+TGG - Chr7:78041796-78041815 None:intergenic 35.0%
! ACCCATAGACTACAGATTTT+TGG - Chr7:78039255-78039274 None:intergenic 35.0%
! AGCTGGCTTAGATAAAACTA+AGG + Chr7:78037691-78037710 MsG0780040470.01.T01:intron 35.0%
! ATATATTTCGGAGGGTATGT+TGG - Chr7:78040859-78040878 None:intergenic 35.0%
! CCACTGGTTGAATATCAATT+AGG + Chr7:78037442-78037461 MsG0780040470.01.T01:intron 35.0%
! GAATAACTCAGATTCTGAGA+GGG - Chr7:78038054-78038073 None:intergenic 35.0%
! GATGAAGTTGATTTAGAAGC+TGG + Chr7:78040019-78040038 MsG0780040470.01.T01:CDS 35.0%
! GTAGTGCTGAAAATATCAGT+TGG + Chr7:78038766-78038785 MsG0780040470.01.T01:intron 35.0%
! GTCTGTTTTCCTTGATTAAG+AGG - Chr7:78036118-78036137 None:intergenic 35.0%
! TTTAATGGATCCAGTTGTAG+AGG + Chr7:78040269-78040288 MsG0780040470.01.T01:intron 35.0%
! TTTAGGATAAATGGCAGTAG+AGG + Chr7:78040453-78040472 MsG0780040470.01.T01:intron 35.0%
! TTTTGACATCTCAGCTATGT+TGG + Chr7:78039016-78039035 MsG0780040470.01.T01:intron 35.0%
!! AAACAACATTCTGGTTTGTC+CGG - Chr7:78041233-78041252 None:intergenic 35.0%
!! AATGTGCTGTTTGATTGTGA+TGG + Chr7:78041275-78041294 MsG0780040470.01.T01:intron 35.0%
!! CAAAATCAGTCATTTTCTCC+AGG - Chr7:78039631-78039650 None:intergenic 35.0%
!! CTGGAGAAAATGACTGATTT+TGG + Chr7:78039629-78039648 MsG0780040470.01.T01:intron 35.0%
!! GAGTTGTTTTCTCTAGAGAT+AGG - Chr7:78039171-78039190 None:intergenic 35.0%
!! GATTTGTTGTGTTCGGAATT+TGG - Chr7:78041028-78041047 None:intergenic 35.0%
!! GGTATGTTGGTAATTTGCAT+AGG - Chr7:78040846-78040865 None:intergenic 35.0%
!! TGATTTTTCGATGGTTCCTT+TGG + Chr7:78036600-78036619 MsG0780040470.01.T01:CDS 35.0%
!! TGGACAAGATTTGTTGTGTT+CGG - Chr7:78041035-78041054 None:intergenic 35.0%
!! TGTTTTCTCTAGAGATAGGT+TGG - Chr7:78039167-78039186 None:intergenic 35.0%
!! TTAACTTTGTGGGTTAGGTT+CGG - Chr7:78039124-78039143 None:intergenic 35.0%
!! TTTTGGGTAGGTTTTGATGT+CGG + Chr7:78036357-78036376 MsG0780040470.01.T01:intron 35.0%
!!! GGCCTTTCCACATTTTTTTT+GGG + Chr7:78040785-78040804 MsG0780040470.01.T01:intron 35.0%
!!! TGACTGATTTTGGAACCTTT+TGG + Chr7:78039639-78039658 MsG0780040470.01.T01:intron 35.0%
!!! TTTAAAGCCAGCTGCTTTTA+AGG - Chr7:78038266-78038285 None:intergenic 35.0%
AAAGGTCATTGCTGGTAAAG+GGG - Chr7:78036674-78036693 None:intergenic 40.0%
AAATACTAAAATGCCCCCAG+CGG + Chr7:78039755-78039774 MsG0780040470.01.T01:intron 40.0%
AACACTCAAACACTCCAAGT+CGG + Chr7:78034982-78035001 MsG0780040470.01.T01:CDS 40.0%
AAGAACCAAAGACACTGCAT+TGG + Chr7:78036393-78036412 MsG0780040470.01.T01:CDS 40.0%
AAGGAGGAGATCCAGAAAAA+TGG + Chr7:78040510-78040529 MsG0780040470.01.T01:intron 40.0%
ACCTTCCATGATGTTTGACA+AGG - Chr7:78041097-78041116 None:intergenic 40.0%
AGAAGAACCTTAAAAGCAGC+TGG + Chr7:78038256-78038275 MsG0780040470.01.T01:intron 40.0%
AGAAGATCAAAGGATATCGC+TGG + Chr7:78038613-78038632 MsG0780040470.01.T01:intron 40.0%
AGACACGACTTGAAATCCAA+AGG - Chr7:78036619-78036638 None:intergenic 40.0%
AGACTTGCAAGCAGAATCAT+TGG - Chr7:78038369-78038388 None:intergenic 40.0%
AGAGAGAGAGAGAGAAAATG+GGG - Chr7:78040985-78041004 None:intergenic 40.0%
AGAGAGAGAGAGAGAGAAAA+TGG - Chr7:78040987-78041006 None:intergenic 40.0%
AGGTTGAAGGTAATTGGGTT+TGG + Chr7:78040383-78040402 MsG0780040470.01.T01:intron 40.0%
ATCCATGTCGAAATCACAGA+AGG - Chr7:78035717-78035736 None:intergenic 40.0%
ATGCTAGAAGGAGGGTTTAA+CGG - Chr7:78035378-78035397 None:intergenic 40.0%
ATTCCAGTTGTCCACTTTGT+CGG + Chr7:78038024-78038043 MsG0780040470.01.T01:intron 40.0%
ATTGTTAGAGCGAGTGTTTG+TGG - Chr7:78035085-78035104 None:intergenic 40.0%
CAAGTCTCAACAATCTTAGG+TGG - Chr7:78036427-78036446 None:intergenic 40.0%
CCTTCCATGATGTTTGACAA+GGG - Chr7:78041096-78041115 None:intergenic 40.0%
CGTATGGGTTTAAAGGTTCA+CGG - Chr7:78034939-78034958 None:intergenic 40.0%
CTAACAACAGCAGCATCTTA+CGG - Chr7:78038238-78038257 None:intergenic 40.0%
CTTCTTCTTTCTGTCCAATG+CGG - Chr7:78038498-78038517 None:intergenic 40.0%
GAAAAGTGGGAAGAAAAGGT+AGG + Chr7:78035639-78035658 MsG0780040470.01.T01:intron 40.0%
GAATTCTGTCGAATCCAATC+CGG + Chr7:78041163-78041182 MsG0780040470.01.T01:intron 40.0%
GACATGGATAACTCAATTGG+AGG + Chr7:78035728-78035747 MsG0780040470.01.T01:intron 40.0%
GAGAGAGAGAGAGAGAAAAT+GGG - Chr7:78040986-78041005 None:intergenic 40.0%
GATACTCCTGTGAAGAAATG+GGG + Chr7:78035884-78035903 MsG0780040470.01.T01:intron 40.0%
GCATCAATACCAAAACCTTC+AGG + Chr7:78037464-78037483 MsG0780040470.01.T01:intron 40.0%
GCGAAGATATGAATCTGACA+AGG - Chr7:78035123-78035142 None:intergenic 40.0%
GGACAATGAATGCCAAACAA+GGG + Chr7:78038302-78038321 MsG0780040470.01.T01:intron 40.0%
GGATACTCCTGTGAAGAAAT+GGG + Chr7:78035883-78035902 MsG0780040470.01.T01:intron 40.0%
GGTTGAAGGTAATTGGGTTT+GGG + Chr7:78040384-78040403 MsG0780040470.01.T01:intron 40.0%
GGTTTAACGGTTCAGAAACT+AGG - Chr7:78035365-78035384 None:intergenic 40.0%
GTGAGGAATTCATCTTAGCA+TGG + Chr7:78037611-78037630 MsG0780040470.01.T01:intron 40.0%
GTGTATGTATGGAACACAGT+CGG + Chr7:78037589-78037608 MsG0780040470.01.T01:intron 40.0%
GTTTGACAAGGGTTGAAATG+TGG - Chr7:78041085-78041104 None:intergenic 40.0%
TACCAAAACCTTCAGGTGAT+AGG + Chr7:78037471-78037490 MsG0780040470.01.T01:intron 40.0%
TACCTTTGAACAATGGAAGG+AGG + Chr7:78040494-78040513 MsG0780040470.01.T01:intron 40.0%
TAGTAGATGGATACATCGAG+TGG + Chr7:78041695-78041714 MsG0780040470.01.T01:CDS 40.0%
TATAAACCTTCAACGTGCCA+CGG - Chr7:78035764-78035783 None:intergenic 40.0%
TCAACCCTTGTCAAACATCA+TGG + Chr7:78041089-78041108 MsG0780040470.01.T01:intron 40.0%
TCAGTCTTGAAAGATTCAGG+GGG - Chr7:78038083-78038102 None:intergenic 40.0%
TCCATTAAGTACACTCTGGA+GGG - Chr7:78038427-78038446 None:intergenic 40.0%
TCCGGATTCGAATTTCGAAA+GGG - Chr7:78041215-78041234 None:intergenic 40.0%
TCTATGTCTTCTTGCTGATC+TGG - Chr7:78041486-78041505 None:intergenic 40.0%
TTAACAACTTAACTCGGGTC+AGG + Chr7:78037534-78037553 MsG0780040470.01.T01:intron 40.0%
TTCAATTGTTGGGGTGTGAT+TGG + Chr7:78036936-78036955 MsG0780040470.01.T01:intron 40.0%
TTGGAGTCGTATGGGTTTAA+AGG - Chr7:78034946-78034965 None:intergenic 40.0%
TTGGTAGATGACCTTACTTC+TGG - Chr7:78038137-78038156 None:intergenic 40.0%
TTGGTTACTGTGAGGATTAG+TGG + Chr7:78038677-78038696 MsG0780040470.01.T01:intron 40.0%
TTGTGGCTGAAACAACAAGT+GGG + Chr7:78040536-78040555 MsG0780040470.01.T01:intron 40.0%
TTGTTAGAGCGAGTGTTTGT+GGG - Chr7:78035084-78035103 None:intergenic 40.0%
TTTGAATGCGAAGAGGAGAT+GGG + Chr7:78035979-78035998 MsG0780040470.01.T01:intron 40.0%
! GAATAGAGTTGGTTACTGTG+AGG + Chr7:78038669-78038688 MsG0780040470.01.T01:intron 40.0%
! GCTGTTCATGACGCTTTTAA+CGG + Chr7:78035162-78035181 MsG0780040470.01.T01:CDS 40.0%
! TGACCCGAGTTAAGTTGTTA+AGG - Chr7:78037535-78037554 None:intergenic 40.0%
! TGATTGCTTTGAATGCGAAG+AGG + Chr7:78035972-78035991 MsG0780040470.01.T01:intron 40.0%
! TGGTTACTGTGAGGATTAGT+GGG + Chr7:78038678-78038697 MsG0780040470.01.T01:intron 40.0%
!! ACCAAAAAGAAGCACTAGGA+TGG + Chr7:78035421-78035440 MsG0780040470.01.T01:CDS 40.0%
!! AGCCACAACTTCCATTTTTC+TGG - Chr7:78040524-78040543 None:intergenic 40.0%
!! ATACATCGAGTGGTTTTACC+AGG + Chr7:78041705-78041724 MsG0780040470.01.T01:CDS 40.0%
!! CAGTTGATAAACTGTTCCAC+TGG + Chr7:78037426-78037445 MsG0780040470.01.T01:intron 40.0%
!! GAAGCTGGTCTTCAAAAACA+AGG + Chr7:78040034-78040053 MsG0780040470.01.T01:CDS 40.0%
!! TGATGATTTACCGCCGTTTT+GGG + Chr7:78035464-78035483 MsG0780040470.01.T01:CDS 40.0%
!! TTGAGTGTTGAGGACTTTGA+TGG - Chr7:78034971-78034990 None:intergenic 40.0%
!!! AAACTAGGGTTTTGGAAGCT+AGG - Chr7:78035350-78035369 None:intergenic 40.0%
!!! GAGGATCTCCGTTTTGTTTT+AGG + Chr7:78038645-78038664 MsG0780040470.01.T01:intron 40.0%
!!! GATCTGTGCTGATTTTTCGA+TGG + Chr7:78036591-78036610 MsG0780040470.01.T01:CDS 40.0%
!!! GGGCCTTTCCACATTTTTTT+TGG + Chr7:78040784-78040803 MsG0780040470.01.T01:intron 40.0%
!!! GTGTTACTTTTTCCACCCTA+TGG + Chr7:78040807-78040826 MsG0780040470.01.T01:intron 40.0%
AAAGGTAGGGTAGTGTAGAG+AGG + Chr7:78035653-78035672 MsG0780040470.01.T01:intron 45.0%
AACCAAAGACACTGCATTGG+TGG + Chr7:78036396-78036415 MsG0780040470.01.T01:CDS 45.0%
AAGACATGCCTATCACCTGA+AGG - Chr7:78037482-78037501 None:intergenic 45.0%
AAGGTAGGGTAGTGTAGAGA+GGG + Chr7:78035654-78035673 MsG0780040470.01.T01:intron 45.0%
ACAATTACAAGCCGAGGATC+TGG + Chr7:78038589-78038608 MsG0780040470.01.T01:intron 45.0%
AGGATCTGGGAGAAGATCAA+AGG + Chr7:78038603-78038622 MsG0780040470.01.T01:intron 45.0%
ATCAAAGGATATCGCTGGCA+TGG + Chr7:78038618-78038637 MsG0780040470.01.T01:intron 45.0%
ATGTCTGGAAGAATCATGCG+TGG - Chr7:78041739-78041758 None:intergenic 45.0%
ATGTTAATGCGGACAGAGTC+AGG + Chr7:78035946-78035965 MsG0780040470.01.T01:intron 45.0%
ATTGCTTGTTCTTCAACGGC+AGG - Chr7:78038463-78038482 None:intergenic 45.0%
CAATAACCTGAGCCCTTGTT+TGG - Chr7:78038317-78038336 None:intergenic 45.0%
CAATTACAAGCCGAGGATCT+GGG + Chr7:78038590-78038609 MsG0780040470.01.T01:intron 45.0%
CATGATTCTTCCAGACATGC+CGG + Chr7:78041741-78041760 MsG0780040470.01.T01:CDS 45.0%
CATGTCGAAATCACAGAAGG+AGG - Chr7:78035714-78035733 None:intergenic 45.0%
CCCTTGTCAAACATCATGGA+AGG + Chr7:78041093-78041112 MsG0780040470.01.T01:intron 45.0%
CGGATACTCCTGTGAAGAAA+TGG + Chr7:78035882-78035901 MsG0780040470.01.T01:intron 45.0%
CTCCATTAAGTACACTCTGG+AGG - Chr7:78038428-78038447 None:intergenic 45.0%
CTCCTCCTTCCATTGTTCAA+AGG - Chr7:78040499-78040518 None:intergenic 45.0%
CTCCTTCTGTGATTTCGACA+TGG + Chr7:78035712-78035731 MsG0780040470.01.T01:intron 45.0%
CTTTGAATGCGAAGAGGAGA+TGG + Chr7:78035978-78035997 MsG0780040470.01.T01:intron 45.0%
GAGGTGCAGAAAAAGGTTGA+AGG + Chr7:78040370-78040389 MsG0780040470.01.T01:intron 45.0%
GCATGTCTTGGCAGATGATT+GGG + Chr7:78037493-78037512 MsG0780040470.01.T01:intron 45.0%
GCCCTTTCGAAATTCGAATC+CGG + Chr7:78041211-78041230 MsG0780040470.01.T01:intron 45.0%
GGGACAATGAATGCCAAACA+AGG + Chr7:78038301-78038320 MsG0780040470.01.T01:intron 45.0%
GTCAGCGCGTGTTTCTTTAA+CGG - Chr7:78035247-78035266 None:intergenic 45.0%
GTCCGGATTCGAATTTCGAA+AGG - Chr7:78041216-78041235 None:intergenic 45.0%
GTCGGCATTAAACACTACTC+CGG + Chr7:78034880-78034899 MsG0780040470.01.T01:CDS 45.0%
GTCTAATACTCAGCGCGTAA+GGG + Chr7:78041335-78041354 MsG0780040470.01.T01:CDS 45.0%
GTGTTTAATGCCGACGATGT+TGG - Chr7:78034875-78034894 None:intergenic 45.0%
GTTCAGCGACCTCTTAATCA+AGG + Chr7:78036106-78036125 MsG0780040470.01.T01:CDS 45.0%
GTTGTGGCTGAAACAACAAG+TGG + Chr7:78040535-78040554 MsG0780040470.01.T01:intron 45.0%
TAGTCCCGGAAAACGAAATC+CGG - Chr7:78041185-78041204 None:intergenic 45.0%
TCAATCATTCATGCAGCCCA+TGG + Chr7:78039932-78039951 MsG0780040470.01.T01:intron 45.0%
TCAGCAAGAAGACATAGAGC+AGG + Chr7:78041488-78041507 MsG0780040470.01.T01:CDS 45.0%
TCTGCCAAGTTCACATCAAC+AGG - Chr7:78041592-78041611 None:intergenic 45.0%
TGCACCTGTTGATGTGAACT+TGG + Chr7:78041585-78041604 MsG0780040470.01.T01:intron 45.0%
TGCCGTTGAAGAACAAGCAA+TGG + Chr7:78038462-78038481 MsG0780040470.01.T01:intron 45.0%
TGGGGGGGAGATAAACAAAT+TGG - Chr7:78037934-78037953 None:intergenic 45.0%
TGTGGAAAGGCCCAATAAAG+AGG - Chr7:78040777-78040796 None:intergenic 45.0%
TGTTAGAGCGAGTGTTTGTG+GGG - Chr7:78035083-78035102 None:intergenic 45.0%
TTATCAAACTAATGCGCGGC+CGG + Chr7:78035524-78035543 MsG0780040470.01.T01:CDS 45.0%
TTCAGGTGATAGGCATGTCT+TGG + Chr7:78037481-78037500 MsG0780040470.01.T01:intron 45.0%
TTGATCTTCTCCCAGATCCT+CGG - Chr7:78038603-78038622 None:intergenic 45.0%
TTGCAGCAATTCAGGGTTCT+TGG - Chr7:78037869-78037888 None:intergenic 45.0%
TTGCTTGTTCTTCAACGGCA+GGG - Chr7:78038462-78038481 None:intergenic 45.0%
TTGGAGGAACATACTAACCG+TGG + Chr7:78035744-78035763 MsG0780040470.01.T01:intron 45.0%
TTTGTTGGAAGCTTAGGACG+AGG + Chr7:78036750-78036769 MsG0780040470.01.T01:intron 45.0%
! ACCAAAGACACTGCATTGGT+GGG + Chr7:78036397-78036416 MsG0780040470.01.T01:CDS 45.0%
! CAACCTTTTTCTGCACCTCT+TGG - Chr7:78040369-78040388 None:intergenic 45.0%
! CAATCCGGATTTCGTTTTCC+GGG + Chr7:78041178-78041197 MsG0780040470.01.T01:intron 45.0%
! CCAATCCGGATTTCGTTTTC+CGG + Chr7:78041177-78041196 MsG0780040470.01.T01:intron 45.0%
! CGGTTCAGAAACTAGGGTTT+TGG - Chr7:78035358-78035377 None:intergenic 45.0%
! CTGATGATTTACCGCCGTTT+TGG + Chr7:78035463-78035482 MsG0780040470.01.T01:CDS 45.0%
! CTTGGAGTGTTTGAGTGTTG+AGG - Chr7:78034981-78035000 None:intergenic 45.0%
! GCCATCCTAGTGCTTCTTTT+TGG - Chr7:78035425-78035444 None:intergenic 45.0%
! TGCCTATCACCTGAAGGTTT+TGG - Chr7:78037476-78037495 None:intergenic 45.0%
! TGTTACAGAATCAGCGCTGA+CGG - Chr7:78035271-78035290 None:intergenic 45.0%
!! AGCGCTGATTCTGTAACAAC+CGG + Chr7:78035273-78035292 MsG0780040470.01.T01:CDS 45.0%
!! CAGCACCAAAAAGAAGCACT+AGG + Chr7:78035417-78035436 MsG0780040470.01.T01:CDS 45.0%
!! GCTGGTCTTCAAAAACAAGG+TGG + Chr7:78040037-78040056 MsG0780040470.01.T01:CDS 45.0%
AAGAGAAGGGCCTCTACAAC+TGG - Chr7:78040282-78040301 None:intergenic 50.0%
ACTCCTGTGAAGAAATGGGG+TGG + Chr7:78035887-78035906 MsG0780040470.01.T01:intron 50.0%
AGCGCGTGTTTCTTTAACGG+CGG - Chr7:78035244-78035263 None:intergenic 50.0%
AGGATGGAACACAGTCAGTG+AGG + Chr7:78037554-78037573 MsG0780040470.01.T01:intron 50.0%
AGGGTGGAGAGTGAGACAAA+TGG + Chr7:78035673-78035692 MsG0780040470.01.T01:intron 50.0%
AGTCTCAGAGCTTCGAGTAC+AGG + Chr7:78038384-78038403 MsG0780040470.01.T01:intron 50.0%
ATACGCTGCAACTCCACATC+AGG - Chr7:78041519-78041538 None:intergenic 50.0%
ATATCGCTGGCATGGCATTG+AGG + Chr7:78038626-78038645 MsG0780040470.01.T01:intron 50.0%
CAACTTAACTCGGGTCAGGA+TGG + Chr7:78037538-78037557 MsG0780040470.01.T01:intron 50.0%
CATCTACTACCTCCACACCA+TGG - Chr7:78041684-78041703 None:intergenic 50.0%
CATGGTGTGGAGGTAGTAGA+TGG + Chr7:78041682-78041701 MsG0780040470.01.T01:CDS 50.0%
CCCTCTTTCTCCTCCCAAAA+CGG - Chr7:78035480-78035499 None:intergenic 50.0%
CCGGAAAACGAAATCCGGAT+TGG - Chr7:78041180-78041199 None:intergenic 50.0%
CGGCTCCATTAAGTACACTC+TGG - Chr7:78038431-78038450 None:intergenic 50.0%
CGTCTAATACTCAGCGCGTA+AGG + Chr7:78041334-78041353 MsG0780040470.01.T01:CDS 50.0%
CTACATTGGGAGCTGAGTTG+CGG + Chr7:78035855-78035874 MsG0780040470.01.T01:intron 50.0%
CTCAAGATGCTGAGGAGTTG+AGG + Chr7:78035805-78035824 MsG0780040470.01.T01:intron 50.0%
CTTCTTTCTGTCCAATGCGG+TGG - Chr7:78038495-78038514 None:intergenic 50.0%
GAAAGGGCAACAACTAGTCC+CGG - Chr7:78041199-78041218 None:intergenic 50.0%
GACCTTACTTCTGGTGTGCA+CGG - Chr7:78038128-78038147 None:intergenic 50.0%
GAGTGTACTTAATGGAGCCG+TGG + Chr7:78038431-78038450 MsG0780040470.01.T01:intron 50.0%
GCCCTCCAGAGTGTACTTAA+TGG + Chr7:78038423-78038442 MsG0780040470.01.T01:intron 50.0%
GGATTAAGCCGAGGATTTCG+CGG - Chr7:78034918-78034937 None:intergenic 50.0%
GGCAGTAGAGGACATGTGAT+CGG + Chr7:78040465-78040484 MsG0780040470.01.T01:intron 50.0%
GGCATGTCTTGGCAGATGAT+TGG + Chr7:78037492-78037511 MsG0780040470.01.T01:intron 50.0%
GGTCTTTGATGTGGTCTCTG+TGG - Chr7:78041775-78041794 None:intergenic 50.0%
TAATACTCAGCGCGTAAGGG+AGG + Chr7:78041338-78041357 MsG0780040470.01.T01:CDS 50.0%
TACTAACCGTGGCACGTTGA+AGG + Chr7:78035755-78035774 MsG0780040470.01.T01:intron 50.0%
TAGGAGGACTCAAGATGCTG+AGG + Chr7:78035797-78035816 MsG0780040470.01.T01:intron 50.0%
TCTCTCGGGAGGGATATTTG+CGG + Chr7:78035551-78035570 MsG0780040470.01.T01:CDS 50.0%
TCTTTCTCCTCCCAAAACGG+CGG - Chr7:78035477-78035496 None:intergenic 50.0%
TGAATGCCAAACAAGGGCTC+AGG + Chr7:78038308-78038327 MsG0780040470.01.T01:intron 50.0%
TGAGGCTGTTAACAACCGCT+GGG - Chr7:78039773-78039792 None:intergenic 50.0%
TGATGTGGAGTTGCAGCGTA+TGG + Chr7:78041518-78041537 MsG0780040470.01.T01:CDS 50.0%
TGTACTTAATGGAGCCGTGG+TGG + Chr7:78038434-78038453 MsG0780040470.01.T01:intron 50.0%
TGTATGGAACACAGTCGGTG+AGG + Chr7:78037594-78037613 MsG0780040470.01.T01:intron 50.0%
! AAGGTTCACGGATTAAGCCG+AGG - Chr7:78034927-78034946 None:intergenic 50.0%
! CCAAAGACACTGCATTGGTG+GGG + Chr7:78036398-78036417 MsG0780040470.01.T01:CDS 50.0%
! CCACCAAGAGGTGCAGAAAA+AGG + Chr7:78040363-78040382 MsG0780040470.01.T01:intron 50.0%
! CCTTTTTCTGCACCTCTTGG+TGG - Chr7:78040366-78040385 None:intergenic 50.0%
! TACCTGCAATCGACTCATCC+CGG - Chr7:78036140-78036159 None:intergenic 50.0%
! TGATGGCGTTGGAGTCGTAT+GGG - Chr7:78034954-78034973 None:intergenic 50.0%
! TGATTATGCGCTGACACCTC+AGG + Chr7:78041639-78041658 MsG0780040470.01.T01:intron 50.0%
! TTTCTGCACCTCTTGGTGGT+GGG - Chr7:78040362-78040381 None:intergenic 50.0%
! TTTTCTGCACCTCTTGGTGG+TGG - Chr7:78040363-78040382 None:intergenic 50.0%
!! AAGAGGAGATGGGCTGTTAC+GGG + Chr7:78035989-78036008 MsG0780040470.01.T01:intron 50.0%
!! AGGTGTTGGCTGCAAGTACA+TGG - Chr7:78036850-78036869 None:intergenic 50.0%
!! CGCAAGTTTGTGGCTTGCTT+AGG + Chr7:78037150-78037169 MsG0780040470.01.T01:intron 50.0%
!! GAAGAGGAGATGGGCTGTTA+CGG + Chr7:78035988-78036007 MsG0780040470.01.T01:intron 50.0%
!! GGAGGAGGATGTTTTGGATG+AGG + Chr7:78035908-78035927 MsG0780040470.01.T01:intron 50.0%
!! GTTGAGGACTTTGATGGCGT+TGG - Chr7:78034965-78034984 None:intergenic 50.0%
!! TGATTTACCGCCGTTTTGGG+AGG + Chr7:78035467-78035486 MsG0780040470.01.T01:CDS 50.0%
!! TTGATGGCGTTGGAGTCGTA+TGG - Chr7:78034955-78034974 None:intergenic 50.0%
!!! CCGTTTTGGGAGGAGAAAGA+GGG + Chr7:78035477-78035496 MsG0780040470.01.T01:CDS 50.0%
!!! CGTTTTGGGAGGAGAAAGAG+GGG + Chr7:78035478-78035497 MsG0780040470.01.T01:CDS 50.0%
AGAGACTGCAGTCCATGGTG+TGG + Chr7:78041669-78041688 MsG0780040470.01.T01:intron 55.0%
AGAGCAGGAGATGCCTGATG+TGG + Chr7:78041503-78041522 MsG0780040470.01.T01:CDS 55.0%
AGCCGTGCACACCAGAAGTA+AGG + Chr7:78038123-78038142 MsG0780040470.01.T01:CDS 55.0%
AGGCAACAGATGGAGGCTGA+AGG + Chr7:78041390-78041409 MsG0780040470.01.T01:CDS 55.0%
AGGCTGTTAACAACCGCTGG+GGG - Chr7:78039771-78039790 None:intergenic 55.0%
AGGGATATTTGCGGACGGGA+TGG + Chr7:78035560-78035579 MsG0780040470.01.T01:CDS 55.0%
ATGGATCGTGTCCACCGCAT+TGG + Chr7:78038481-78038500 MsG0780040470.01.T01:intron 55.0%
CAGCGGTAGTTAACTACCGC+TGG + Chr7:78039791-78039810 MsG0780040470.01.T01:intron 55.0%
CCCCACCAATGCAGTGTCTT+TGG - Chr7:78036401-78036420 None:intergenic 55.0%
CCTCCACCCCATTTCTTCAC+AGG - Chr7:78035893-78035912 None:intergenic 55.0%
CCTGTGAAGAAATGGGGTGG+AGG + Chr7:78035890-78035909 MsG0780040470.01.T01:intron 55.0%
CGCGTTCGATGTAACCGACT+TGG - Chr7:78034999-78035018 None:intergenic 55.0%
CGGTTGTTAACAACCGCTGG+AGG + Chr7:78040639-78040658 MsG0780040470.01.T01:intron 55.0%
CTGAGGCTGTTAACAACCGC+TGG - Chr7:78039774-78039793 None:intergenic 55.0%
GAGCGGTTGTTAACAACCGC+TGG + Chr7:78040636-78040655 MsG0780040470.01.T01:intron 55.0%
GAGGCTGTTAACAACCGCTG+GGG - Chr7:78039772-78039791 None:intergenic 55.0%
GCAAATATCCCTCCCGAGAG+AGG - Chr7:78035552-78035571 None:intergenic 55.0%
GCGGTAGTTAACTACCGCTG+AGG + Chr7:78039793-78039812 MsG0780040470.01.T01:intron 55.0%
GCGGTAGTTAACTACCGCTG+AGG - Chr7:78039812-78039793 None:intergenic 55.0%
GCGGTTGTTAACAGCCTCAG+CGG + Chr7:78039774-78039793 MsG0780040470.01.T01:intron 55.0%
GCGTGTTTCTTTAACGGCGG+CGG - Chr7:78035241-78035260 None:intergenic 55.0%
GGGATATTTGCGGACGGGAT+GGG + Chr7:78035561-78035580 MsG0780040470.01.T01:CDS 55.0%
GGTTGACATCCCAGCTATGC+TGG + Chr7:78038968-78038987 MsG0780040470.01.T01:intron 55.0%
GTAGGGTAGTGTAGAGAGGG+TGG + Chr7:78035657-78035676 MsG0780040470.01.T01:intron 55.0%
GTGAAGAAATGGGGTGGAGG+AGG + Chr7:78035893-78035912 MsG0780040470.01.T01:intron 55.0%
TATGGAGGAGCAGGAGCTTG+AGG + Chr7:78041536-78041555 MsG0780040470.01.T01:CDS 55.0%
TCATGCGTGGATGAGACACC+TGG - Chr7:78041726-78041745 None:intergenic 55.0%
TCGGGAGGGATATTTGCGGA+CGG + Chr7:78035555-78035574 MsG0780040470.01.T01:CDS 55.0%
TCTTCCAGACATGCCGGTAC+CGG + Chr7:78041747-78041766 MsG0780040470.01.T01:CDS 55.0%
TGATGTGGTCTCTGTGGCAC+CGG - Chr7:78041769-78041788 None:intergenic 55.0%
TGCTGTGATGAGAAGCGGTC+TGG + Chr7:78041802-78041821 MsG0780040470.01.T01:CDS 55.0%
TGTGGAGTTGCAGCGTATGG+AGG + Chr7:78041521-78041540 MsG0780040470.01.T01:CDS 55.0%
TTAACTACCGCTGAGGCCAG+CGG + Chr7:78040590-78040609 MsG0780040470.01.T01:intron 55.0%
TTGCGGACGGGATGGGATTA+GGG + Chr7:78035568-78035587 MsG0780040470.01.T01:CDS 55.0%
TTGGGAGAGACTGCAGTCCA+TGG + Chr7:78041664-78041683 MsG0780040470.01.T01:intron 55.0%
TTTGCGGACGGGATGGGATT+AGG + Chr7:78035567-78035586 MsG0780040470.01.T01:CDS 55.0%
! GGGGTTGCTGCTTGTAGTCT+TGG - Chr7:78040342-78040361 None:intergenic 55.0%
! TAATTTGCATAGGGCGCGCG+AGG - Chr7:78040836-78040855 None:intergenic 55.0%
! TGGGGTGGAGGAGGATGTTT+TGG + Chr7:78035902-78035921 MsG0780040470.01.T01:intron 55.0%
!! AGAGGAGATGGGCTGTTACG+GGG + Chr7:78035990-78036009 MsG0780040470.01.T01:intron 55.0%
!! ATGATGTGAGCGTCGAGGAG+AGG - Chr7:78035042-78035061 None:intergenic 55.0%
!! CTGAAGGTACTGTTCCTCCG+AGG + Chr7:78041406-78041425 MsG0780040470.01.T01:CDS 55.0%
!! TTCTGCACCTCTTGGTGGTG+GGG - Chr7:78040361-78040380 None:intergenic 55.0%
!!! GCCGTTTTGGGAGGAGAAAG+AGG + Chr7:78035476-78035495 MsG0780040470.01.T01:CDS 55.0%
ACAACCGCTCTGCAAACCGC+CGG - Chr7:78040626-78040645 None:intergenic 60.0%
ACAACCGGCGGTTTGCAGAG+CGG + Chr7:78040619-78040638 MsG0780040470.01.T01:intron 60.0%
AGCGCGTAGGCAACAGATGG+AGG + Chr7:78041383-78041402 MsG0780040470.01.T01:CDS 60.0%
AGGCAGGGCATGCTTCCAGT+AGG + Chr7:78041358-78041377 MsG0780040470.01.T01:CDS 60.0%
ATCACCGGCCGCGAAATCCT+CGG + Chr7:78034907-78034926 MsG0780040470.01.T01:CDS 60.0%
CACTACTCCGGCACCATCAC+CGG + Chr7:78034892-78034911 MsG0780040470.01.T01:CDS 60.0%
CAGCGGCAGTTAACAACCGG+CGG + Chr7:78040607-78040626 MsG0780040470.01.T01:intron 60.0%
CGGGAGGGATATTTGCGGAC+GGG + Chr7:78035556-78035575 MsG0780040470.01.T01:CDS 60.0%
CGGGGGACGCCTATTCAGAA+TGG + Chr7:78036008-78036027 MsG0780040470.01.T01:intron 60.0%
GACCGGGATGAGTCGATTGC+AGG + Chr7:78036135-78036154 MsG0780040470.01.T01:CDS 60.0%
GACTGCAGTCCATGGTGTGG+AGG + Chr7:78041672-78041691 MsG0780040470.01.T01:intron 60.0%
GAGCTTGAGGAGGAGCTGCA+GGG + Chr7:78041549-78041568 MsG0780040470.01.T01:CDS 60.0%
GCAGTCTCTCCCAACTCCTG+AGG - Chr7:78041658-78041677 None:intergenic 60.0%
GCGAGTGTTTGTGGGGACGA+TGG - Chr7:78035076-78035095 None:intergenic 60.0%
GGCCAGCGGCAGTTAACAAC+CGG + Chr7:78040604-78040623 MsG0780040470.01.T01:intron 60.0%
GGGAGCTGAGTTGCGGTGTT+CGG + Chr7:78035862-78035881 MsG0780040470.01.T01:intron 60.0%
GTACTGTTCCTCCGAGGCGT+CGG + Chr7:78041412-78041431 MsG0780040470.01.T01:CDS 60.0%
GTTGCAGCGTATGGAGGAGC+AGG + Chr7:78041527-78041546 MsG0780040470.01.T01:CDS 60.0%
TAAGCCGAGGATTTCGCGGC+CGG - Chr7:78034914-78034933 None:intergenic 60.0%
TCAACGGCAGGGTTCCACCA+CGG - Chr7:78038451-78038470 None:intergenic 60.0%
TCTGGCTGCTGCTCGACATC+AGG - Chr7:78041468-78041487 None:intergenic 60.0%
TCTGGTGTGCACGGCTCAGT+AGG - Chr7:78038119-78038138 None:intergenic 60.0%
TGAGGAGGAGCTGCAGGGTA+TGG + Chr7:78041554-78041573 MsG0780040470.01.T01:intron 60.0%
TTGCCTACGCGCTCTCCTAC+TGG - Chr7:78041376-78041395 None:intergenic 60.0%
! ACTTGGGGTGCCAGCATAGC+TGG - Chr7:78038981-78039000 None:intergenic 60.0%
! AGAAGCGGTCTGGTGCCGAA+AGG + Chr7:78041812-78041831 MsG0780040470.01.T01:CDS 60.0%
! CGTGGATGATGTGAGCGTCG+AGG - Chr7:78035047-78035066 None:intergenic 60.0%
! CTTCCAGTAGGAGAGCGCGT+AGG + Chr7:78041370-78041389 MsG0780040470.01.T01:CDS 60.0%
! CTTGGGGTGCCAGCATAGCT+GGG - Chr7:78038980-78038999 None:intergenic 60.0%
! GAAGCGGTCTGGTGCCGAAA+GGG + Chr7:78041813-78041832 MsG0780040470.01.T01:CDS 60.0%
! GAGAGCGCGTAGGCAACAGA+TGG + Chr7:78041380-78041399 MsG0780040470.01.T01:CDS 60.0%
! GCGCCGACAAAGTGGACAAC+TGG - Chr7:78038030-78038049 None:intergenic 60.0%
! GCGCTGACACCTCAGGAGTT+GGG + Chr7:78041646-78041665 MsG0780040470.01.T01:intron 60.0%
! TACTGTTCCTCCGAGGCGTC+GGG + Chr7:78041413-78041432 MsG0780040470.01.T01:CDS 60.0%
! TGCGCTGACACCTCAGGAGT+TGG + Chr7:78041645-78041664 MsG0780040470.01.T01:intron 60.0%
! TTAACTGCCGCTGGCCTCAG+CGG - Chr7:78040600-78040619 None:intergenic 60.0%
!! GAGGAGATGGGCTGTTACGG+GGG + Chr7:78035991-78036010 MsG0780040470.01.T01:intron 60.0%
ACTCAGCGCGTAAGGGAGGC+AGG + Chr7:78041342-78041361 MsG0780040470.01.T01:CDS 65.0%
ATCCCTCCCGAGAGAGGCTC+CGG - Chr7:78035546-78035565 None:intergenic 65.0%
CTCAGCGCGTAAGGGAGGCA+GGG + Chr7:78041343-78041362 MsG0780040470.01.T01:CDS 65.0%
GAGGATTTCGCGGCCGGTGA+TGG - Chr7:78034908-78034927 None:intergenic 65.0%
GCAGCAACCCCACCACCAAG+AGG + Chr7:78040351-78040370 MsG0780040470.01.T01:intron 65.0%
GGAGCTGCAGGGTATGGACG+AGG + Chr7:78041560-78041579 MsG0780040470.01.T01:intron 65.0%
GGAGCTTGAGGAGGAGCTGC+AGG + Chr7:78041548-78041567 MsG0780040470.01.T01:CDS 65.0%
GGAGGAGCAGGAGCTTGAGG+AGG + Chr7:78041539-78041558 MsG0780040470.01.T01:CDS 65.0%
GTCGAGGAGAGGAGCGAGAG+CGG - Chr7:78035031-78035050 None:intergenic 65.0%
TGGGGACGATGGCTTCGACG+TGG - Chr7:78035065-78035084 None:intergenic 65.0%
TTTGCATAGGGCGCGCGAGG+AGG - Chr7:78040833-78040852 None:intergenic 65.0%
! CGCCGGTTGTTAACTGCCGC+TGG - Chr7:78040609-78040628 None:intergenic 65.0%
!! ACTGTTCCTCCGAGGCGTCG+GGG + Chr7:78041414-78041433 MsG0780040470.01.T01:CDS 65.0%
!! GAGAGGGAGCGCCGACAAAG+TGG - Chr7:78038038-78038057 None:intergenic 65.0%
!! GGTCTCTGTGGCACCGGTAC+CGG - Chr7:78041763-78041782 None:intergenic 65.0%
CCTCTAGCACCCCGACGCCT+CGG - Chr7:78041426-78041445 None:intergenic 70.0%
GAGGAGAGGAGCGAGAGCGG+CGG - Chr7:78035028-78035047 None:intergenic 70.0%
! TTCGCGGCCGGTGATGGTGC+CGG - Chr7:78034902-78034921 None:intergenic 70.0%
!! GGCACCGGTACCGGCATGTC+TGG - Chr7:78041754-78041773 None:intergenic 70.0%
AGGAGCGAGAGCGGCGGCGA+CGG - Chr7:78035022-78035041 None:intergenic 75.0%
AGGGCGCGCGAGGAGGCCAT+AGG - Chr7:78040826-78040845 None:intergenic 75.0%
CGCGCGAGGAGGCCATAGGG+TGG - Chr7:78040822-78040841 None:intergenic 75.0%
CTAGCACCCCGACGCCTCGG+AGG - Chr7:78041423-78041442 None:intergenic 75.0%
GGCCGGAGCCTCTCTCGGGA+GGG + Chr7:78035541-78035560 MsG0780040470.01.T01:CDS 75.0%
GGGCGCGCGAGGAGGCCATA+GGG - Chr7:78040825-78040844 None:intergenic 75.0%
TGCGCGGCCGGAGCCTCTCT+CGG + Chr7:78035536-78035555 MsG0780040470.01.T01:CDS 75.0%
!! CCGAGGCGTCGGGGTGCTAG+AGG + Chr7:78041423-78041442 MsG0780040470.01.T01:CDS 75.0%
! CGGCCGGAGCCTCTCTCGGG+AGG + Chr7:78035540-78035559 MsG0780040470.01.T01:CDS 80.0%
! GCGCGGCCGGAGCCTCTCTC+GGG + Chr7:78035537-78035556 MsG0780040470.01.T01:CDS 80.0%
Chromosome Type Strat End Strand Name
Chr7 gene 78034868 78041840 78034868 ID=MsG0780040470.01;Name=MsG0780040470.01
Chr7 mRNA 78034868 78041840 78034868 ID=MsG0780040470.01.T01;Parent=MsG0780040470.01;Name=MsG0780040470.01.T01;_AED=0.40;_eAED=0.40;_QI=0|0|0|0.71|1|1|7|0|624
Chr7 exon 78034868 78035656 78034868 ID=MsG0780040470.01.T01:exon:15512;Parent=MsG0780040470.01.T01
Chr7 exon 78036088 78036156 78036088 ID=MsG0780040470.01.T01:exon:15513;Parent=MsG0780040470.01.T01
Chr7 exon 78036367 78036661 78036367 ID=MsG0780040470.01.T01:exon:15514;Parent=MsG0780040470.01.T01
Chr7 exon 78038060 78038236 78038060 ID=MsG0780040470.01.T01:exon:15515;Parent=MsG0780040470.01.T01
Chr7 exon 78040011 78040148 78040011 ID=MsG0780040470.01.T01:exon:15516;Parent=MsG0780040470.01.T01
Chr7 exon 78041325 78041570 78041325 ID=MsG0780040470.01.T01:exon:15517;Parent=MsG0780040470.01.T01
Chr7 exon 78041680 78041840 78041680 ID=MsG0780040470.01.T01:exon:15518;Parent=MsG0780040470.01.T01
Chr7 CDS 78034868 78035656 78034868 ID=MsG0780040470.01.T01:cds;Parent=MsG0780040470.01.T01
Chr7 CDS 78036088 78036156 78036088 ID=MsG0780040470.01.T01:cds;Parent=MsG0780040470.01.T01
Chr7 CDS 78036367 78036661 78036367 ID=MsG0780040470.01.T01:cds;Parent=MsG0780040470.01.T01
Chr7 CDS 78038060 78038236 78038060 ID=MsG0780040470.01.T01:cds;Parent=MsG0780040470.01.T01
Chr7 CDS 78040011 78040148 78040011 ID=MsG0780040470.01.T01:cds;Parent=MsG0780040470.01.T01
Chr7 CDS 78041325 78041570 78041325 ID=MsG0780040470.01.T01:cds;Parent=MsG0780040470.01.T01
Chr7 CDS 78041680 78041840 78041680 ID=MsG0780040470.01.T01:cds;Parent=MsG0780040470.01.T01
Gene Sequence

>MsG0780040470.01.T01

ATGGCCAACATCGTCGGCATTAAACACTACTCCGGCACCATCACCGGCCGCGAAATCCTCGGCTTAATCCGTGAACCTTTAAACCCATACGACTCCAACGCCATCAAAGTCCTCAACACTCAAACACTCCAAGTCGGTTACATCGAACGCGCCGTCGCCGCCGCTCTCGCTCCTCTCCTCGACGCTCACATCATCCACGTCGAAGCCATCGTCCCCACAAACACTCGCTCTAACAATAACAAATTCCGTATCCCTTGTCAGATTCATATCTTCGCTCATCAATCTGCTTTTGATGCTGTTCATGACGCTTTTAACGGTTCCAATGTTCATTTCATTTCGTATAGTGATCCTTCGTTTACTCTTTCTCATTCCGCCGCCGTTAAAGAAACACGCGCTGACACCGTCAGCGCTGATTCTGTAACAACCGGTAATAATAATAGTAAAAACCTAGATCAAATTTTCAAACTCGTTCGAGAAAACCTAGCTTCCAAAACCCTAGTTTCTGAACCGTTAAACCCTCCTTCTAGCATTATTAAATCAGAGCTTCTGCAGCACCAAAAAGAAGCACTAGGATGGCTTTATCATCGTGAAAGTGCTGATGATTTACCGCCGTTTTGGGAGGAGAAAGAGGGGAATTTTGTTAATGTGTTGACGAATTATCAAACTAATGCGCGGCCGGAGCCTCTCTCGGGAGGGATATTTGCGGACGGGATGGGATTAGGGAAGACGTTAACGTTGCTATCGTTGATTGGTTATGATAAAATGAAAAATGAAAAGTGGGAAGAAAAGAGTTATTGGCAAAGCTTGGTTCAGCGACCTCTTAATCAAGGAAAACAGACCGGGATGAGTCGATTGCAGGTTTTGATGTCGGCAATATCATTGCGAAGAACCAAAGACACTGCATTGGTGGGGCTTCCACCTAAGATTGTTGAGACTTGTCATGTTGAACTTTCATTTGAAGAACGTAAACTGTATGATGAGGTTAAAGAGGAAATAAAGTCACTTATGATGCATCATAACAGCAATGACAGACTAGTATCTAGTTATTCCACTATACTAAGTATGATTCTAAGACTTCGTCAGATCTGTGCTGATTTTTCGATGGTTCCTTTGGATTTCAAGTCGTGTCTATTTTCTTCAACTGATATTGAAGAATCTGAGTTATTCTCAGCACCCCCTGAATCTTTCAAGACTGATGACACTGATGATCCTACTGAGCCGTGCACACCAGAAGTAAGGTCATCTACCAAAATCGCTACTTTGATAAAGCTTCTTACGGAATCAAGGGATCAAAATCCAGCTACAAAATCAGTTGTATTTTCACAATTCCTTATGAAAGATGAAGTTGATTTAGAAGCTGGTCTTCAAAAACAAGGTGGTGTTGAATTAACAAGATCTTCATTGACCCATTTGGAAACTGATATGAATCTGTTCTTGGAAGAGGCAGAGAAAGTAAGAACAGAAATGGAAGGTTCAACGTCTAATACTCAGCGCGTAAGGGAGGCAGGGCATGCTTCCAGTAGGAGAGCGCGTAGGCAACAGATGGAGGCTGAAGGTACTGTTCCTCCGAGGCGTCGGGGTGCTAGAGGACGTCGTGCTGATGTCGATCCTGATGTCGAGCAGCAGCCAGATCAGCAAGAAGACATAGAGCAGGAGATGCCTGATGTGGAGTTGCAGCGTATGGAGGAGCAGGAGCTTGAGGAGGAGCTGCAGGTCCATGGTGTGGAGGTAGTAGATGGATACATCGAGTGGTTTTACCAGGTGTCTCATCCACGCATGATTCTTCCAGACATGCCGGTACCGGTGCCACAGAGACCACATCAAAGACCACATTTATGCTGTGATGAGAAGCGGTCTGGTGCCGAAAGGGAGTGA
Protein sequence

>MsG0780040470.01.T01

MANIVGIKHYSGTITGREILGLIREPLNPYDSNAIKVLNTQTLQVGYIERAVAAALAPLLDAHIIHVEAIVPTNTRSNNNKFRIPCQIHIFAHQSAFDAVHDAFNGSNVHFISYSDPSFTLSHSAAVKETRADTVSADSVTTGNNNSKNLDQIFKLVRENLASKTLVSEPLNPPSSIIKSELLQHQKEALGWLYHRESADDLPPFWEEKEGNFVNVLTNYQTNARPEPLSGGIFADGMGLGKTLTLLSLIGYDKMKNEKWEEKSYWQSLVQRPLNQGKQTGMSRLQVLMSAISLRRTKDTALVGLPPKIVETCHVELSFEERKLYDEVKEEIKSLMMHHNSNDRLVSSYSTILSMILRLRQICADFSMVPLDFKSCLFSSTDIEESELFSAPPESFKTDDTDDPTEPCTPEVRSSTKIATLIKLLTESRDQNPATKSVVFSQFLMKDEVDLEAGLQKQGGVELTRSSLTHLETDMNLFLEEAEKVRTEMEGSTSNTQRVREAGHASSRRARRQQMEAEGTVPPRRRGARGRRADVDPDVEQQPDQQEDIEQEMPDVELQRMEEQELEEELQVHGVEVVDGYIEWFYQVSHPRMILPDMPVPVPQRPHQRPHLCCDEKRSGAERE*