AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780040513.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040513.01.T01 MTR_7g091850 80.044 451 67 5 1 429 1 450 0.0 681
MsG0780040513.01.T01 MTR_7g091840 88.329 377 32 3 1 365 1 377 0.0 654
MsG0780040513.01.T01 MTR_1g052315 60.690 435 141 10 13 422 1 430 1.39e-176 501
MsG0780040513.01.T01 MTR_2g060350 48.349 424 193 8 11 411 11 431 1.51e-130 384
MsG0780040513.01.T01 MTR_3g030540 50.000 426 188 10 7 412 6 426 9.09e-120 356
MsG0780040513.01.T01 MTR_2g103410 46.524 374 189 5 61 424 58 430 2.70e-110 332
MsG0780040513.01.T01 MTR_8g065030 42.582 364 200 3 61 416 64 426 6.73e-104 316
MsG0780040513.01.T01 MTR_6g005630 43.895 344 187 4 55 395 38 378 5.74e-98 300
MsG0780040513.01.T01 MTR_4g094715 40.157 381 207 7 61 422 64 442 1.73e-89 279
MsG0780040513.01.T01 MTR_5g034090 39.837 369 185 4 61 395 120 485 1.35e-86 274
MsG0780040513.01.T01 MTR_2g435640 39.323 384 210 10 55 422 46 422 3.48e-86 269
MsG0780040513.01.T01 MTR_1g086390 40.000 355 191 6 61 396 80 431 4.66e-85 268
MsG0780040513.01.T01 MTR_6g005630 40.698 344 175 6 55 395 38 355 3.83e-83 261
MsG0780040513.01.T01 MTR_7g110050 39.093 353 196 5 61 396 66 416 1.17e-82 261
MsG0780040513.01.T01 MTR_4g083660 43.056 360 195 7 56 408 3 359 1.55e-82 258
MsG0780040513.01.T01 MTR_4g084050 39.142 373 213 7 62 422 23 393 1.25e-81 256
MsG0780040513.01.T01 MTR_8g030930 40.476 378 205 9 60 422 25 397 2.69e-81 256
MsG0780040513.01.T01 MTR_8g065010 37.669 369 192 4 62 395 107 472 6.55e-81 259
MsG0780040513.01.T01 MTR_2g049400 40.000 370 204 8 63 422 29 390 8.18e-81 254
MsG0780040513.01.T01 MTR_2g103650 38.032 376 216 7 62 422 28 401 1.14e-80 254
MsG0780040513.01.T01 MTR_3g084360 39.944 358 206 6 62 412 24 379 1.31e-80 254
MsG0780040513.01.T01 MTR_5g043350 40.111 359 201 7 62 410 29 383 1.93e-78 249
MsG0780040513.01.T01 MTR_2g032710 39.510 367 203 5 51 400 56 420 2.33e-78 250
MsG0780040513.01.T01 MTR_3g438050 39.050 379 214 8 56 422 21 394 2.81e-78 248
MsG0780040513.01.T01 MTR_1g012390 38.400 375 212 10 58 420 24 391 1.39e-77 246
MsG0780040513.01.T01 MTR_8g010080 40.896 357 191 10 61 410 30 373 2.74e-77 245
MsG0780040513.01.T01 MTR_3g084380 39.496 357 197 7 62 406 21 370 1.87e-76 243
MsG0780040513.01.T01 MTR_5g033680 36.888 347 203 4 62 395 59 402 1.99e-76 246
MsG0780040513.01.T01 MTR_4g120320 38.298 376 210 10 60 420 50 418 1.99e-76 244
MsG0780040513.01.T01 MTR_7g113910 37.010 408 165 8 7 406 11 334 3.39e-76 242
MsG0780040513.01.T01 MTR_6g028080 38.187 364 199 8 62 409 30 383 2.05e-75 241
MsG0780040513.01.T01 MTR_0157s0060 40.171 351 199 6 66 410 2 347 2.82e-75 239
MsG0780040513.01.T01 MTR_4g034020 40.171 351 199 6 66 410 2 347 2.82e-75 239
MsG0780040513.01.T01 MTR_8g010110 40.449 356 195 9 61 410 30 374 2.98e-75 240
MsG0780040513.01.T01 MTR_3g054320 39.058 361 197 9 62 410 30 379 3.07e-75 240
MsG0780040513.01.T01 MTR_8g010070 40.503 358 193 10 61 410 30 375 5.30e-74 237
MsG0780040513.01.T01 MTR_2g103410 45.946 259 131 3 61 310 58 316 1.05e-73 234
MsG0780040513.01.T01 MTR_8g010090 39.496 357 197 10 61 410 30 374 1.73e-73 235
MsG0780040513.01.T01 MTR_1g088160 36.695 357 207 9 61 405 34 383 2.03e-73 236
MsG0780040513.01.T01 MTR_8g008765 40.994 322 178 5 61 379 30 342 3.00e-73 233
MsG0780040513.01.T01 MTR_2g058640 36.436 376 217 9 61 422 24 391 8.85e-73 234
MsG0780040513.01.T01 MTR_7g035415 42.069 290 156 7 61 343 39 323 6.32e-72 229
MsG0780040513.01.T01 MTR_8g010040 40.169 356 193 10 62 410 32 374 1.52e-71 230
MsG0780040513.01.T01 MTR_8g009810 37.887 388 224 9 44 422 20 399 1.03e-70 229
MsG0780040513.01.T01 MTR_1g013740 36.158 354 207 8 62 410 35 374 5.48e-68 221
MsG0780040513.01.T01 MTR_1g013730 37.006 354 204 8 62 410 27 366 1.28e-67 220
MsG0780040513.01.T01 MTR_5g034090 40.493 284 135 2 61 310 120 403 8.33e-66 216
MsG0780040513.01.T01 MTR_2g058840 32.181 376 231 7 61 422 24 389 8.45e-66 216
MsG0780040513.01.T01 MTR_2g058670 32.275 378 230 7 61 422 24 391 1.19e-65 216
MsG0780040513.01.T01 MTR_5g097860 36.778 329 195 8 52 371 16 340 1.25e-64 211
MsG0780040513.01.T01 MTR_2g029170 39.048 315 178 7 104 409 38 347 9.66e-63 207
MsG0780040513.01.T01 MTR_8g077320 39.062 320 156 7 61 365 32 327 3.90e-60 200
MsG0780040513.01.T01 MTR_8g010050 35.097 359 177 11 61 410 30 341 7.60e-58 194
MsG0780040513.01.T01 MTR_5g063430 35.959 292 169 7 60 341 23 306 2.37e-57 191
MsG0780040513.01.T01 MTR_8g008700 40.909 264 145 4 121 382 14 268 2.89e-55 185
MsG0780040513.01.T01 MTR_8g031180 42.857 196 104 2 194 383 70 263 5.86e-46 160
MsG0780040513.01.T01 MTR_2g100040 28.726 369 198 10 38 394 2 317 2.49e-41 150
MsG0780040513.01.T01 MTR_4g124980 24.211 380 227 13 61 395 73 436 3.46e-22 99.0
MsG0780040513.01.T01 MTR_2g042740 23.760 383 225 14 61 395 55 418 1.16e-21 97.4
MsG0780040513.01.T01 MTR_5g090160 25.076 327 183 11 63 343 45 355 1.53e-18 87.8
MsG0780040513.01.T01 MTR_3g449590 25.817 306 178 13 63 329 48 343 4.67e-17 83.2
MsG0780040513.01.T01 MTR_3g096330 25.904 332 160 12 61 334 75 378 9.32e-17 83.2
MsG0780040513.01.T01 MTR_1g100040 24.112 394 249 14 66 420 60 442 7.33e-16 79.7
MsG0780040513.01.T01 MTR_1g100050 22.843 394 254 15 66 420 54 436 1.09e-15 79.3
MsG0780040513.01.T01 MTR_1g100060 23.441 401 256 15 66 426 97 486 1.53e-15 79.0
MsG0780040513.01.T01 MTR_7g078680 24.737 380 220 16 63 395 56 416 1.98e-14 75.5
MsG0780040513.01.T01 MTR_8g098840 23.022 417 262 18 53 425 35 436 2.93e-14 74.7
MsG0780040513.01.T01 MTR_7g088550 24.342 304 182 12 66 330 54 348 4.42e-14 74.3
MsG0780040513.01.T01 MTR_1g086030 25.000 344 210 10 63 368 83 416 6.27e-14 73.9
MsG0780040513.01.T01 MTR_7g110710 27.640 322 181 12 63 343 44 354 9.14e-14 73.2
MsG0780040513.01.T01 MTR_7g110710 27.640 322 181 12 63 343 44 354 1.13e-13 73.2
MsG0780040513.01.T01 MTR_8g028725 25.000 348 212 13 63 371 56 393 2.76e-13 72.0
MsG0780040513.01.T01 MTR_1g086030 27.039 233 149 5 152 368 85 312 9.64e-13 69.7
MsG0780040513.01.T01 MTR_4g120730 22.564 390 240 13 53 395 27 401 3.89e-12 68.2
MsG0780040513.01.T01 MTR_1g099850 22.444 401 251 15 64 420 57 441 1.21e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040513.01.T01 AT2G41850 56.986 365 140 6 57 411 63 420 1.41e-130 384
MsG0780040513.01.T01 AT3G07970 49.883 429 192 9 3 413 7 430 1.39e-129 381
MsG0780040513.01.T01 AT3G57510 52.033 369 159 7 64 422 70 430 1.19e-124 368
MsG0780040513.01.T01 AT1G80170 47.541 366 178 5 43 395 30 394 1.07e-112 338
MsG0780040513.01.T01 AT1G70500 41.562 397 217 5 35 422 45 435 1.39e-104 318
MsG0780040513.01.T01 AT1G23460 43.681 364 196 3 61 416 42 404 9.12e-102 310
MsG0780040513.01.T01 AT1G23460 43.681 364 196 3 61 416 66 428 2.52e-101 310
MsG0780040513.01.T01 AT2G43890 40.782 358 196 7 62 410 29 379 9.17e-91 280
MsG0780040513.01.T01 AT5G14650 41.593 339 190 4 62 395 51 386 8.13e-90 279
MsG0780040513.01.T01 AT1G05660 40.751 373 202 9 61 422 27 391 9.77e-88 272
MsG0780040513.01.T01 AT3G15720 41.316 380 207 7 59 425 15 391 1.14e-87 274
MsG0780040513.01.T01 AT3G15720 41.316 380 207 7 59 425 14 390 1.42e-87 274
MsG0780040513.01.T01 AT2G43880 38.564 376 215 7 56 422 25 393 2.39e-87 271
MsG0780040513.01.T01 AT1G56710 40.113 354 192 5 61 396 47 398 3.96e-87 272
MsG0780040513.01.T01 AT1G05650 41.226 359 192 9 61 408 27 377 4.27e-87 271
MsG0780040513.01.T01 AT1G10640 40.811 370 182 5 60 395 117 483 6.14e-87 275
MsG0780040513.01.T01 AT1G60590 39.678 373 185 5 60 395 121 490 1.36e-86 274
MsG0780040513.01.T01 AT3G15720 41.053 380 205 7 59 425 14 387 5.26e-86 270
MsG0780040513.01.T01 AT5G44840 39.024 369 217 6 60 422 22 388 2.12e-85 266
MsG0780040513.01.T01 AT1G02460 40.274 365 191 7 61 404 88 446 1.51e-84 267
MsG0780040513.01.T01 AT5G27530 41.011 356 195 6 60 410 51 396 5.17e-84 265
MsG0780040513.01.T01 AT3G26610 42.571 350 187 5 61 399 66 412 1.00e-83 265
MsG0780040513.01.T01 AT1G48100 38.162 359 204 4 54 396 72 428 3.57e-83 263
MsG0780040513.01.T01 AT1G78400 39.335 361 204 7 60 409 33 389 9.79e-82 257
MsG0780040513.01.T01 AT1G17150 39.153 378 211 9 60 424 31 402 1.22e-81 257
MsG0780040513.01.T01 AT5G17200 39.554 359 190 6 61 396 38 392 2.78e-81 256
MsG0780040513.01.T01 AT2G33160 40.934 364 197 9 60 409 30 389 2.79e-81 263
MsG0780040513.01.T01 AT2G43860 41.555 373 198 9 62 422 33 397 3.10e-80 253
MsG0780040513.01.T01 AT4G01890 38.781 361 198 7 61 400 64 422 1.25e-79 254
MsG0780040513.01.T01 AT4G18180 38.107 391 212 11 58 422 35 421 2.82e-79 251
MsG0780040513.01.T01 AT1G80170 45.907 281 139 4 43 310 30 310 4.58e-79 248
MsG0780040513.01.T01 AT4G35670 38.965 367 215 6 62 422 24 387 9.77e-79 249
MsG0780040513.01.T01 AT3G59850 39.037 374 210 9 60 422 21 387 7.10e-78 247
MsG0780040513.01.T01 AT3G59850 39.037 374 210 9 60 422 65 431 1.17e-77 248
MsG0780040513.01.T01 AT2G43870 39.011 364 203 9 56 408 15 370 9.35e-77 244
MsG0780040513.01.T01 AT1G43080 37.731 379 215 10 60 422 29 402 1.16e-76 244
MsG0780040513.01.T01 AT3G07840 38.501 387 203 11 54 422 18 387 1.69e-75 241
MsG0780040513.01.T01 AT1G43090 38.251 366 205 10 60 409 29 389 3.43e-75 241
MsG0780040513.01.T01 AT1G80140 39.144 327 188 5 98 419 6 326 4.55e-75 238
MsG0780040513.01.T01 AT2G15450 37.368 380 215 11 60 422 29 402 7.09e-75 239
MsG0780040513.01.T01 AT2G15460 38.420 367 203 11 60 409 29 389 9.75e-75 239
MsG0780040513.01.T01 AT4G32380 37.288 354 215 5 76 422 41 394 1.00e-74 241
MsG0780040513.01.T01 AT1G43100 37.802 373 197 11 60 409 29 389 1.62e-73 237
MsG0780040513.01.T01 AT4G13760 37.158 366 209 10 60 409 29 389 2.15e-73 236
MsG0780040513.01.T01 AT5G44830 38.824 340 192 6 88 422 1 329 9.14e-73 232
MsG0780040513.01.T01 AT1G02790 38.218 348 196 8 61 400 51 387 1.55e-72 234
MsG0780040513.01.T01 AT3G07820 36.842 380 219 9 54 422 17 386 1.70e-72 233
MsG0780040513.01.T01 AT2G15470 37.602 367 206 11 60 409 29 389 3.81e-72 233
MsG0780040513.01.T01 AT2G43880 39.103 312 175 6 56 358 25 330 9.63e-72 229
MsG0780040513.01.T01 AT2G40310 37.158 366 209 10 60 409 29 389 2.11e-71 231
MsG0780040513.01.T01 AT3G07830 38.251 366 196 10 75 422 34 387 3.52e-71 230
MsG0780040513.01.T01 AT5G48140 36.649 382 220 9 54 424 18 388 4.59e-71 229
MsG0780040513.01.T01 AT3G15720 39.634 328 189 5 104 425 3 327 4.80e-71 229
MsG0780040513.01.T01 AT2G26620 38.187 364 206 11 60 409 29 387 6.54e-70 226
MsG0780040513.01.T01 AT1G65570 37.778 360 205 10 62 409 31 383 1.16e-68 223
MsG0780040513.01.T01 AT3G14040 38.070 373 209 11 62 419 71 436 1.10e-67 222
MsG0780040513.01.T01 AT3G07850 37.534 373 211 11 62 419 70 435 9.40e-66 217
MsG0780040513.01.T01 AT4G32375 39.362 282 169 1 143 422 13 294 2.77e-65 215
MsG0780040513.01.T01 AT5G14650 40.157 254 147 2 62 310 51 304 2.05e-63 207
MsG0780040513.01.T01 AT4G32370 40.357 280 158 5 76 346 49 328 7.83e-63 206
MsG0780040513.01.T01 AT5G39910 37.037 297 167 7 61 351 35 317 2.34e-60 201
MsG0780040513.01.T01 AT4G35670 39.716 282 165 3 143 422 2 280 7.58e-59 194
MsG0780040513.01.T01 AT4G32380 32.861 353 191 5 76 422 41 353 2.59e-58 197
MsG0780040513.01.T01 AT3G42950 25.323 387 214 11 61 395 65 428 1.92e-23 102
MsG0780040513.01.T01 AT1G19170 24.416 385 221 15 61 395 86 450 1.41e-21 97.4
MsG0780040513.01.T01 AT4G33440 24.724 453 243 15 7 388 22 447 1.52e-18 88.2
MsG0780040513.01.T01 AT3G06770 25.773 388 218 12 55 393 36 402 3.20e-18 87.0
MsG0780040513.01.T01 AT3G06770 25.773 388 218 12 55 393 37 403 3.56e-18 86.7
MsG0780040513.01.T01 AT2G23900 25.185 405 246 18 64 425 58 448 3.84e-18 86.7
MsG0780040513.01.T01 AT4G23820 25.429 350 200 15 63 365 42 377 7.42e-17 82.8
MsG0780040513.01.T01 AT3G62110 23.427 461 288 16 5 426 3 437 2.06e-15 78.6
MsG0780040513.01.T01 AT3G62110 23.427 461 288 16 5 426 3 437 2.06e-15 78.6
MsG0780040513.01.T01 AT3G48950 22.892 415 243 14 64 425 47 437 3.68e-15 77.8
MsG0780040513.01.T01 AT5G41870 23.913 322 199 11 60 343 43 356 5.85e-15 77.0
MsG0780040513.01.T01 AT4G23500 23.116 398 254 16 63 420 69 454 6.36e-15 77.0
MsG0780040513.01.T01 AT3G61490 23.250 400 253 15 63 420 61 448 4.36e-14 74.3
MsG0780040513.01.T01 AT3G61490 23.250 400 253 15 63 420 46 433 4.43e-14 74.3
MsG0780040513.01.T01 AT3G61490 23.250 400 253 15 63 420 46 433 4.43e-14 74.3
MsG0780040513.01.T01 AT3G61490 23.250 400 253 15 63 420 46 433 4.43e-14 74.3
MsG0780040513.01.T01 AT3G06770 26.866 268 164 7 148 393 76 333 4.99e-14 73.6
MsG0780040513.01.T01 AT3G06770 26.866 268 164 7 148 393 76 333 4.99e-14 73.6
MsG0780040513.01.T01 AT3G06770 26.866 268 164 7 148 393 58 315 5.11e-14 73.6
MsG0780040513.01.T01 AT3G61490 23.250 400 253 15 63 420 159 546 5.35e-14 74.3

Find 91 sgRNAs with CRISPR-Local

Find 211 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTATGACACATTGCTAATT+TGG 0.120438 7:+78591184 None:intergenic
GTGAATGGAGCTAAGATTTC+TGG 0.145479 7:-78592135 MsG0780040513.01.T01:CDS
ACAAATCCATATTTCATTTC+AGG 0.195474 7:-78593268 MsG0780040513.01.T01:CDS
TCGGTTAATGTTACAGCTTC+TGG 0.250981 7:-78593243 MsG0780040513.01.T01:CDS
CCGAATCCTGAAATGAAATA+TGG 0.268272 7:+78593262 None:intergenic
GTTCAACAACTATTAGTTAA+TGG 0.273645 7:-78593782 MsG0780040513.01.T01:CDS
TGGGAAGTAGTATGTTCTTC+AGG 0.283522 7:-78594072 MsG0780040513.01.T01:CDS
AAATTTAATTGACAGATATC+TGG 0.297808 7:-78593875 MsG0780040513.01.T01:intron
TCATTGAAATATACAAATTA+AGG 0.298953 7:-78590979 None:intergenic
AAATCCAGGGACATTGTTTC+GGG 0.300030 7:-78592165 MsG0780040513.01.T01:CDS
GGTTAAATGCAGGGAGGTTC+AGG 0.324538 7:-78591426 MsG0780040513.01.T01:intron
ATTTCAATGAGCCGCAGTTT+GGG 0.346475 7:+78590992 None:intergenic
CCATATTTCATTTCAGGATT+CGG 0.351816 7:-78593262 MsG0780040513.01.T01:CDS
AAAATCCAGGGACATTGTTT+CGG 0.353625 7:-78592166 MsG0780040513.01.T01:CDS
TATTTCAATGAGCCGCAGTT+TGG 0.369531 7:+78590991 None:intergenic
AACTAATAGTTGTTGAACTT+TGG 0.373745 7:+78593787 None:intergenic
TATCTTAGTATTGGAAGCTT+GGG 0.374211 7:-78592195 MsG0780040513.01.T01:intron
ATGAGAGGAGGAAATGTCTT+AGG 0.383327 7:+78594417 None:intergenic
CACATTTCAGAACATTGAAA+TGG 0.390271 7:-78591388 MsG0780040513.01.T01:CDS
GTGTCATACCTGAATATAAC+AGG 0.395209 7:-78591171 MsG0780040513.01.T01:CDS
AAGATTTCTGGAACTACAAA+TGG 0.398447 7:-78592123 MsG0780040513.01.T01:CDS
GCGGACCAGGCCATGGCATC+AGG 0.406952 7:-78592907 MsG0780040513.01.T01:intron
CAAGGACCAGAGAATCTGAT+TGG 0.415737 7:+78594003 None:intergenic
ACATGAATTCCATCCGTGTT+AGG 0.419206 7:+78593192 None:intergenic
ATATCTTAGTATTGGAAGCT+TGG 0.428320 7:-78592196 MsG0780040513.01.T01:intron
TTCAGGCATTCGAGAAGGCT+TGG 0.431825 7:-78594092 MsG0780040513.01.T01:intron
GTCGATGATTATGGAGCTAA+AGG 0.435348 7:-78594236 MsG0780040513.01.T01:CDS
TAATTTACCATTTGTTTACA+TGG 0.435991 7:+78591309 None:intergenic
CTCAAACCAATCAGATTCTC+TGG 0.441568 7:-78594009 MsG0780040513.01.T01:CDS
GATTGTATATCAATTGTAGA+TGG 0.452714 7:-78592962 MsG0780040513.01.T01:CDS
CGCTACCTGATGCCATGGCC+TGG 0.453593 7:+78592902 None:intergenic
TCAGGCATTCGAGAAGGCTT+GGG 0.458704 7:-78594091 MsG0780040513.01.T01:intron
GTTTCGGGAGTATTAGTGAA+TGG 0.461707 7:-78592150 MsG0780040513.01.T01:CDS
AACATAGACTTGATATATGA+TGG 0.466309 7:-78591075 MsG0780040513.01.T01:CDS
TTGGTCAATTATTATAGGGT+TGG 0.477376 7:+78591356 None:intergenic
TGCATTTCTATCTCCTTGCA+TGG 0.477492 7:+78591099 None:intergenic
TGGTCTCATTGTGGCATCAC+CGG 0.491708 7:-78593223 MsG0780040513.01.T01:CDS
TTGTTGCATATAGCCTTGGC+TGG 0.493962 7:+78591048 None:intergenic
TACTCCCGAAACAATGTCCC+TGG 0.495411 7:+78592161 None:intergenic
TGGTCCGCAAGTTATGTTTG+TGG 0.496099 7:+78592922 None:intergenic
GGGAAGTAGTATGTTCTTCA+GGG 0.496325 7:-78594071 MsG0780040513.01.T01:CDS
TCGATGATTATGGAGCTAAA+GGG 0.500138 7:-78594235 MsG0780040513.01.T01:CDS
TGATCTTCACTGTAATCTGA+TGG 0.503126 7:+78593830 None:intergenic
TCAACGTATGTAGTAATAAG+TGG 0.504104 7:+78594341 None:intergenic
AACATTGTTGCATATAGCCT+TGG 0.504686 7:+78591044 None:intergenic
TCTAGCTCTATCGCAGCAGC+TGG 0.519170 7:-78593144 MsG0780040513.01.T01:intron
GGTGGCAAAACTCATGCAAA+AGG 0.522181 7:-78593727 MsG0780040513.01.T01:CDS
ACAAACATAACTTGCGGACC+AGG 0.540843 7:-78592920 MsG0780040513.01.T01:CDS
CAAATCTAATGTATCAGTCC+AGG 0.542567 7:-78593980 MsG0780040513.01.T01:intron
AAATTTGAAGTGAACGGGAA+AGG 0.542887 7:+78594264 None:intergenic
ATCTTAGTATTGGAAGCTTG+GGG 0.543845 7:-78592194 MsG0780040513.01.T01:intron
CAACTATTAGTTAATGGTGG+TGG 0.545431 7:-78593776 MsG0780040513.01.T01:CDS
CAGTAAGAAATTTCCATGCA+AGG 0.545752 7:-78591112 MsG0780040513.01.T01:CDS
TAGACGGAAAAGGAAACATA+TGG 0.546731 7:-78593748 MsG0780040513.01.T01:CDS
GGTGGAACCCTAGACGGAAA+AGG 0.550821 7:-78593758 MsG0780040513.01.T01:CDS
ACTGATACATTAGATTTGCA+AGG 0.559269 7:+78593985 None:intergenic
TACAGCTTCTGGTCTCATTG+TGG 0.565673 7:-78593232 MsG0780040513.01.T01:CDS
AGTTAGAATTAAGACTTGGC+CGG 0.569890 7:-78592100 MsG0780040513.01.T01:intron
AGTAGATAAATATTATCTTG+AGG 0.574660 7:+78594030 None:intergenic
TAGTTCGCTACCTGATGCCA+TGG 0.577254 7:+78592897 None:intergenic
TCAGATTACAGTGAAGATCA+AGG 0.584050 7:-78593827 MsG0780040513.01.T01:CDS
ATAACTTGCGGACCAGGCCA+TGG 0.586221 7:-78592914 MsG0780040513.01.T01:CDS
AATGGTGGTGGAACCCTAGA+CGG 0.587941 7:-78593764 MsG0780040513.01.T01:CDS
AACAAATGAAATGATGATGA+TGG 0.588388 7:+78594391 None:intergenic
ACTACATACGTTGATGATGA+TGG 0.588826 7:-78594332 MsG0780040513.01.T01:CDS
TTGCAATAGCAACTTGCAAG+AGG 0.593871 7:-78594366 MsG0780040513.01.T01:CDS
TAATATTCAGGCATTCGAGA+AGG 0.594551 7:-78594097 MsG0780040513.01.T01:intron
CGATGATTATGGAGCTAAAG+GGG 0.599082 7:-78594234 MsG0780040513.01.T01:CDS
TGATGATGATGGTGAATGAG+AGG 0.600422 7:+78594402 None:intergenic
CAACGTATGTAGTAATAAGT+GGG 0.610682 7:+78594342 None:intergenic
GAGGATAGTCCTAACACGGA+TGG 0.610894 7:-78593201 MsG0780040513.01.T01:CDS
GATTATGGAGCTAAAGGGGA+TGG 0.614396 7:-78594230 MsG0780040513.01.T01:CDS
ATGGAGTTAGAATTAAGACT+TGG 0.618304 7:-78592104 MsG0780040513.01.T01:CDS
CAACAACTATTAGTTAATGG+TGG 0.624830 7:-78593779 MsG0780040513.01.T01:CDS
GGAAGTAGTATGTTCTTCAG+GGG 0.627265 7:-78594070 MsG0780040513.01.T01:CDS
ACAGTGAAGATCAAGGACAT+TGG 0.627832 7:-78593820 MsG0780040513.01.T01:CDS
TTTCAATGAGCCGCAGTTTG+GGG 0.630109 7:+78590993 None:intergenic
TCTGACGTTTGATAATTGCA+AGG 0.636252 7:-78593328 MsG0780040513.01.T01:CDS
TCCGTGTTAGGACTATCCTC+CGG 0.636638 7:+78593204 None:intergenic
TTGATCAAGCAAAACACATG+TGG 0.642969 7:-78594287 MsG0780040513.01.T01:CDS
TGATGATGGTGAATGAGAGG+AGG 0.645161 7:+78594405 None:intergenic
ATATGATGGAGAACCAGCCA+AGG 0.648729 7:-78591061 MsG0780040513.01.T01:CDS
TCTTAGTATTGGAAGCTTGG+GGG 0.650863 7:-78592193 MsG0780040513.01.T01:intron
TCTCATTGTGGCATCACCGG+AGG 0.661986 7:-78593220 MsG0780040513.01.T01:CDS
GTTGTTTATTCAGGACTCTG+CGG 0.674299 7:-78591208 MsG0780040513.01.T01:intron
TGGTCAAACTGATGACACAC+AGG 0.686944 7:-78594210 MsG0780040513.01.T01:intron
ACCGGAGGATAGTCCTAACA+CGG 0.688656 7:-78593205 MsG0780040513.01.T01:CDS
ACGGAAAAGGAAACATATGG+TGG 0.700504 7:-78593745 MsG0780040513.01.T01:CDS
GAAGCCACAAACATAACTTG+CGG 0.718028 7:-78592926 MsG0780040513.01.T01:CDS
GTACAAGCTGCCCCAAACTG+CGG 0.740909 7:-78591003 MsG0780040513.01.T01:CDS
ACATACGTTGATGATGATGG+TGG 0.752844 7:-78594329 MsG0780040513.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTAAAATTTGATATTAC+CGG + Chr7:78593328-78593347 None:intergenic 10.0%
!! AGTTGATTATTAAATATAAA+GGG + Chr7:78593931-78593950 None:intergenic 10.0%
!! TAGTTGATTATTAAATATAA+AGG + Chr7:78593932-78593951 None:intergenic 10.0%
!! TTCAAAAAAAAAAAAAAACT+TGG + Chr7:78593095-78593114 None:intergenic 10.0%
!!! AAGTTTTTTTTTTTTTTTGA+AGG - Chr7:78593094-78593113 MsG0780040513.01.T01:intron 10.0%
!! ACAAAAAAATTACAAGAATT+AGG - Chr7:78592318-78592337 MsG0780040513.01.T01:intron 15.0%
!! GTTGATTATTAAATATAAAG+GGG + Chr7:78593930-78593949 None:intergenic 15.0%
!! TATTTATACATTCAACAATT+CGG + Chr7:78593027-78593046 None:intergenic 15.0%
!! TCATAATGAAAGATATTAAT+TGG - Chr7:78592014-78592033 MsG0780040513.01.T01:intron 15.0%
!! TGACTTGATTAAAAAATATT+GGG + Chr7:78591738-78591757 None:intergenic 15.0%
!! TGATTTATATATCTTAGTAT+TGG - Chr7:78593202-78593221 MsG0780040513.01.T01:CDS 15.0%
!! TTATTCATATTTACTCAAAT+AGG - Chr7:78592730-78592749 MsG0780040513.01.T01:intron 15.0%
!! TTCTTAAATAGATAATGATT+AGG + Chr7:78592832-78592851 None:intergenic 15.0%
!!! AAAAAATTGTTAACTTTTTC+AGG + Chr7:78592667-78592686 None:intergenic 15.0%
!!! AATTTTGGTCAATTATTATA+GGG + Chr7:78594057-78594076 None:intergenic 15.0%
!!! GAAATATTTTATTGATTTAG+TGG + Chr7:78593705-78593724 None:intergenic 15.0%
!!! TAATTTTGGTCAATTATTAT+AGG + Chr7:78594058-78594077 None:intergenic 15.0%
!!! TTGACTTGATTAAAAAATAT+TGG + Chr7:78591739-78591758 None:intergenic 15.0%
!! AAATTTAATTGACAGATATC+TGG - Chr7:78591531-78591550 MsG0780040513.01.T01:intron 20.0%
!! ACACTATTATTGTGTTTAAT+TGG + Chr7:78593801-78593820 None:intergenic 20.0%
!! AGTAGATAAATATTATCTTG+AGG + Chr7:78591379-78591398 None:intergenic 20.0%
!! ATATATTATACACAAAAGCA+AGG + Chr7:78593358-78593377 None:intergenic 20.0%
!! ATTAAACACAATAATAGTGT+TGG - Chr7:78593801-78593820 MsG0780040513.01.T01:CDS 20.0%
!! CTAAATAGTTAATTAATCAC+TGG + Chr7:78591473-78591492 None:intergenic 20.0%
!! CTAAATTGATGAGAAAATTT+AGG + Chr7:78591886-78591905 None:intergenic 20.0%
!! TAACTTAATTGTTGAAATCA+TGG - Chr7:78593464-78593483 MsG0780040513.01.T01:intron 20.0%
!! TAATTTACCATTTGTTTACA+TGG + Chr7:78594100-78594119 None:intergenic 20.0%
!! TATATTATACACAAAAGCAA+GGG + Chr7:78593357-78593376 None:intergenic 20.0%
!! TTGAATTCTTTATTGATCAT+AGG - Chr7:78593893-78593912 MsG0780040513.01.T01:intron 20.0%
!! TTTCAACAATTAAGTTAATC+AGG + Chr7:78593461-78593480 None:intergenic 20.0%
!!! ACTAAGACATAAATTTTCTT+TGG - Chr7:78593948-78593967 MsG0780040513.01.T01:intron 20.0%
!!! ATTAAAAATTTGAAGTGAAC+GGG + Chr7:78591150-78591169 None:intergenic 20.0%
!!! ATTTGGGTTAAATATGTTTT+TGG + Chr7:78591255-78591274 None:intergenic 20.0%
!!! ATTTTCCAATAATTTGTTTC+AGG - Chr7:78592417-78592436 MsG0780040513.01.T01:intron 20.0%
!!! ATTTTTAATGTCGATGATTA+TGG - Chr7:78591161-78591180 MsG0780040513.01.T01:CDS 20.0%
!!! CATTAAAAATTTGAAGTGAA+CGG + Chr7:78591151-78591170 None:intergenic 20.0%
!!! TAGTTTTAATAAAACTACGA+TGG - Chr7:78593548-78593567 MsG0780040513.01.T01:intron 20.0%
!!! TGATTTTTTGTTGTTTATTC+AGG - Chr7:78594189-78594208 MsG0780040513.01.T01:intron 20.0%
!!! TTAACTAACTTTGTTTTTGT+AGG - Chr7:78592054-78592073 MsG0780040513.01.T01:intron 20.0%
!!! TTTGAAAAAAGCTACTTTTT+GGG + Chr7:78591512-78591531 None:intergenic 20.0%
!!! TTTTCCAATAATTTGTTTCA+GGG - Chr7:78592418-78592437 MsG0780040513.01.T01:intron 20.0%
!!! TTTTGAAAAAAGCTACTTTT+TGG + Chr7:78591513-78591532 None:intergenic 20.0%
! AAAAAAGCCATGTAAACAAA+TGG - Chr7:78594090-78594109 MsG0780040513.01.T01:CDS 25.0%
! AACATAGACTTGATATATGA+TGG - Chr7:78594331-78594350 MsG0780040513.01.T01:CDS 25.0%
! AACTAATAGTTGTTGAACTT+TGG + Chr7:78591622-78591641 None:intergenic 25.0%
! AATATATAATGTAACTGACC+TGG + Chr7:78591447-78591466 None:intergenic 25.0%
! ACAAATCCATATTTCATTTC+AGG - Chr7:78592138-78592157 MsG0780040513.01.T01:CDS 25.0%
! ATATTATACACAAAAGCAAG+GGG + Chr7:78593356-78593375 None:intergenic 25.0%
! ATGACTATTATTTGACTGTT+CGG - Chr7:78591959-78591978 MsG0780040513.01.T01:intron 25.0%
! GATTGTATATCAATTGTAGA+TGG - Chr7:78592444-78592463 MsG0780040513.01.T01:intron 25.0%
! GTTCAACAACTATTAGTTAA+TGG - Chr7:78591624-78591643 MsG0780040513.01.T01:intron 25.0%
! TCATATTTACTCAAATAGGT+CGG - Chr7:78592734-78592753 MsG0780040513.01.T01:intron 25.0%
! TTTAAGAAAAAAGTCTAGTC+TGG - Chr7:78592844-78592863 MsG0780040513.01.T01:intron 25.0%
!! AACAAATGAAATGATGATGA+TGG + Chr7:78591018-78591037 None:intergenic 25.0%
!! AGAAGCCTATTTAACTTAAA+AGG + Chr7:78592802-78592821 None:intergenic 25.0%
!! TTTTCTTGTCACAGTAATTT+TGG + Chr7:78594072-78594091 None:intergenic 25.0%
!!! ACTTCTTTAAGCTAGTTTTT+GGG - Chr7:78593062-78593081 MsG0780040513.01.T01:intron 25.0%
!!! ATAAATTTTCTTTGGTCTTG+CGG - Chr7:78593956-78593975 MsG0780040513.01.T01:intron 25.0%
!!! CTTGACCTTTTAAGTTAAAT+AGG - Chr7:78592794-78592813 MsG0780040513.01.T01:intron 25.0%
!!! TTTCCAATAATTTGTTTCAG+GGG - Chr7:78592419-78592438 MsG0780040513.01.T01:intron 25.0%
AAAAACCTCTTAGACCTATT+AGG + Chr7:78592760-78592779 None:intergenic 30.0%
AATATAAAGGGGAGTAAGTT+AGG + Chr7:78593919-78593938 None:intergenic 30.0%
ACTGATACATTAGATTTGCA+AGG + Chr7:78591424-78591443 None:intergenic 30.0%
ATGGAGTTAGAATTAAGACT+TGG - Chr7:78593302-78593321 MsG0780040513.01.T01:CDS 30.0%
ATGTGGGATACATAATATTC+AGG - Chr7:78591297-78591316 MsG0780040513.01.T01:intron 30.0%
CAACAACTATTAGTTAATGG+TGG - Chr7:78591627-78591646 MsG0780040513.01.T01:intron 30.0%
CAACGTATGTAGTAATAAGT+GGG + Chr7:78591067-78591086 None:intergenic 30.0%
CACATTTCAGAACATTGAAA+TGG - Chr7:78594018-78594037 MsG0780040513.01.T01:CDS 30.0%
CCATATTTCATTTCAGGATT+CGG - Chr7:78592144-78592163 MsG0780040513.01.T01:CDS 30.0%
GAATATTATGTATCCCACAT+GGG + Chr7:78591297-78591316 None:intergenic 30.0%
TATTATACACAAAAGCAAGG+GGG + Chr7:78593355-78593374 None:intergenic 30.0%
TCAACGTATGTAGTAATAAG+TGG + Chr7:78591068-78591087 None:intergenic 30.0%
TGAATATTATGTATCCCACA+TGG + Chr7:78591298-78591317 None:intergenic 30.0%
TTGGTCAATTATTATAGGGT+TGG + Chr7:78594053-78594072 None:intergenic 30.0%
! AAAACTAGCTTAAAGAAGTG+AGG + Chr7:78593061-78593080 None:intergenic 30.0%
! AAACTAGCTTAAAGAAGTGA+GGG + Chr7:78593060-78593079 None:intergenic 30.0%
! AGAGGAGTATGTTATGATTT+GGG + Chr7:78591271-78591290 None:intergenic 30.0%
! ATATCTTAGTATTGGAAGCT+TGG - Chr7:78593210-78593229 MsG0780040513.01.T01:CDS 30.0%
! CACTTTTACCTGTTATATTC+AGG + Chr7:78594246-78594265 None:intergenic 30.0%
! GATTGAACTGTTTAGAATAC+GGG - Chr7:78591981-78592000 MsG0780040513.01.T01:intron 30.0%
! GGATTGAACTGTTTAGAATA+CGG - Chr7:78591980-78591999 MsG0780040513.01.T01:intron 30.0%
! TAGAGGAGTATGTTATGATT+TGG + Chr7:78591272-78591291 None:intergenic 30.0%
! TATCTTAGTATTGGAAGCTT+GGG - Chr7:78593211-78593230 MsG0780040513.01.T01:CDS 30.0%
!! AAGATTTCTGGAACTACAAA+TGG - Chr7:78593283-78593302 MsG0780040513.01.T01:CDS 30.0%
!! AGCTAGAGATTTTGATGTTT+TGG + Chr7:78592249-78592268 None:intergenic 30.0%
!! GATTTTGATGTTTTGGGTAT+TGG + Chr7:78592242-78592261 None:intergenic 30.0%
!! GCTAGAGATTTTGATGTTTT+GGG + Chr7:78592248-78592267 None:intergenic 30.0%
!!! CACTTCTTTAAGCTAGTTTT+TGG - Chr7:78593061-78593080 MsG0780040513.01.T01:intron 30.0%
AAAATCCAGGGACATTGTTT+CGG - Chr7:78593240-78593259 MsG0780040513.01.T01:CDS 35.0%
AACATTGTTGCATATAGCCT+TGG + Chr7:78594365-78594384 None:intergenic 35.0%
ACGACTGAGATTTGTCTAAA+CGG + Chr7:78591910-78591929 None:intergenic 35.0%
AGTTAGAATTAAGACTTGGC+CGG - Chr7:78593306-78593325 MsG0780040513.01.T01:CDS 35.0%
ATTATACACAAAAGCAAGGG+GGG + Chr7:78593354-78593373 None:intergenic 35.0%
CAAAGTAAATAGAGCAAAGC+TGG - Chr7:78593761-78593780 MsG0780040513.01.T01:CDS 35.0%
CAAATCTAATGTATCAGTCC+AGG - Chr7:78591426-78591445 MsG0780040513.01.T01:intron 35.0%
CAACTATTAGTTAATGGTGG+TGG - Chr7:78591630-78591649 MsG0780040513.01.T01:intron 35.0%
CAGTAAGAAATTTCCATGCA+AGG - Chr7:78594294-78594313 MsG0780040513.01.T01:CDS 35.0%
CCGAATCCTGAAATGAAATA+TGG + Chr7:78592147-78592166 None:intergenic 35.0%
GAACTATGTATACATACCGT+TGG + Chr7:78591861-78591880 None:intergenic 35.0%
GCTGGAAAAAAAAAGTGAAG+AGG + Chr7:78591824-78591843 None:intergenic 35.0%
GGTATGACACATTGCTAATT+TGG + Chr7:78594225-78594244 None:intergenic 35.0%
GTGTCATACCTGAATATAAC+AGG - Chr7:78594235-78594254 MsG0780040513.01.T01:CDS 35.0%
TAATATTCAGGCATTCGAGA+AGG - Chr7:78591309-78591328 MsG0780040513.01.T01:intron 35.0%
TAGACGGAAAAGGAAACATA+TGG - Chr7:78591658-78591677 MsG0780040513.01.T01:intron 35.0%
TCAGATTACAGTGAAGATCA+AGG - Chr7:78591579-78591598 MsG0780040513.01.T01:intron 35.0%
TCGATGATTATGGAGCTAAA+GGG - Chr7:78591171-78591190 MsG0780040513.01.T01:CDS 35.0%
TGATAAGTCTAGTGCATGTT+TGG + Chr7:78593606-78593625 None:intergenic 35.0%
TGATCTTCACTGTAATCTGA+TGG + Chr7:78591579-78591598 None:intergenic 35.0%
TGTATGTTTCCTCCATCTAT+TGG + Chr7:78593828-78593847 None:intergenic 35.0%
TTGATCAAGCAAAACACATG+TGG - Chr7:78591119-78591138 MsG0780040513.01.T01:CDS 35.0%
! AAAGTGAAGAGGCATAAGAT+TGG + Chr7:78591813-78591832 None:intergenic 35.0%
! AAATTTGAAGTGAACGGGAA+AGG + Chr7:78591145-78591164 None:intergenic 35.0%
! AACTTTTACAAACTCACGAC+CGG + Chr7:78593494-78593513 None:intergenic 35.0%
! AATAGTGTTGGACCAATAGA+TGG - Chr7:78593813-78593832 MsG0780040513.01.T01:CDS 35.0%
! ATATGTTTCCTTTTCCGTCT+AGG + Chr7:78591659-78591678 None:intergenic 35.0%
! ATCTTAGTATTGGAAGCTTG+GGG - Chr7:78593212-78593231 MsG0780040513.01.T01:CDS 35.0%
! TATGTTTCCTTTTCCGTCTA+GGG + Chr7:78591658-78591677 None:intergenic 35.0%
! TCTGACGTTTGATAATTGCA+AGG - Chr7:78592078-78592097 MsG0780040513.01.T01:intron 35.0%
! TTGTTAGTTTCACATCGCTT+AGG - Chr7:78592998-78593017 MsG0780040513.01.T01:intron 35.0%
!! ACTACATACGTTGATGATGA+TGG - Chr7:78591074-78591093 MsG0780040513.01.T01:CDS 35.0%
!!! GGTCTAAGAGGTTTTTTGAA+TGG - Chr7:78592764-78592783 MsG0780040513.01.T01:intron 35.0%
!!! TTTTTTTTTCCAGCCTTGCA+AGG - Chr7:78591830-78591849 MsG0780040513.01.T01:intron 35.0%
AAATCCAGGGACATTGTTTC+GGG - Chr7:78593241-78593260 MsG0780040513.01.T01:CDS 40.0%
ACAGTGAAGATCAAGGACAT+TGG - Chr7:78591586-78591605 MsG0780040513.01.T01:intron 40.0%
ACATGAATTCCATCCGTGTT+AGG + Chr7:78592217-78592236 None:intergenic 40.0%
ACGGAAAAGGAAACATATGG+TGG - Chr7:78591661-78591680 MsG0780040513.01.T01:intron 40.0%
ATACTCCTCTATTCCCATGT+GGG - Chr7:78591281-78591300 MsG0780040513.01.T01:intron 40.0%
ATGAGAGGAGGAAATGTCTT+AGG + Chr7:78590992-78591011 None:intergenic 40.0%
ATTTCAATGAGCCGCAGTTT+GGG + Chr7:78594417-78594436 None:intergenic 40.0%
CATGGGTCAAATTCTCACTA+GGG + Chr7:78592921-78592940 None:intergenic 40.0%
CGATGATTATGGAGCTAAAG+GGG - Chr7:78591172-78591191 MsG0780040513.01.T01:CDS 40.0%
CGTCCCCTGAAACAAATTAT+TGG + Chr7:78592425-78592444 None:intergenic 40.0%
CTAGTGCATGTTTGGTATCT+TGG + Chr7:78593598-78593617 None:intergenic 40.0%
CTCAAACCAATCAGATTCTC+TGG - Chr7:78591397-78591416 MsG0780040513.01.T01:CDS 40.0%
GAAAAAAGTCTAGTCTGGCT+TGG - Chr7:78592849-78592868 MsG0780040513.01.T01:intron 40.0%
GAAGCCACAAACATAACTTG+CGG - Chr7:78592480-78592499 MsG0780040513.01.T01:intron 40.0%
GGAAGTAGTATGTTCTTCAG+GGG - Chr7:78591336-78591355 MsG0780040513.01.T01:CDS 40.0%
GGGAAGTAGTATGTTCTTCA+GGG - Chr7:78591335-78591354 MsG0780040513.01.T01:CDS 40.0%
GTCGATGATTATGGAGCTAA+AGG - Chr7:78591170-78591189 MsG0780040513.01.T01:CDS 40.0%
GTGAATGGAGCTAAGATTTC+TGG - Chr7:78593271-78593290 MsG0780040513.01.T01:CDS 40.0%
GTTGTTTATTCAGGACTCTG+CGG - Chr7:78594198-78594217 MsG0780040513.01.T01:intron 40.0%
TATTTCAATGAGCCGCAGTT+TGG + Chr7:78594418-78594437 None:intergenic 40.0%
TCGGTTAATGTTACAGCTTC+TGG - Chr7:78592163-78592182 MsG0780040513.01.T01:CDS 40.0%
TGCATTTCTATCTCCTTGCA+TGG + Chr7:78594310-78594329 None:intergenic 40.0%
TGGGAAGTAGTATGTTCTTC+AGG - Chr7:78591334-78591353 MsG0780040513.01.T01:CDS 40.0%
TTGCAATAGCAACTTGCAAG+AGG - Chr7:78591040-78591059 MsG0780040513.01.T01:CDS 40.0%
TTGTTGAAATCATGGTGAGC+CGG - Chr7:78593472-78593491 MsG0780040513.01.T01:intron 40.0%
! TCTTAGTATTGGAAGCTTGG+GGG - Chr7:78593213-78593232 MsG0780040513.01.T01:CDS 40.0%
!! ACATACGTTGATGATGATGG+TGG - Chr7:78591077-78591096 MsG0780040513.01.T01:CDS 40.0%
!! GTTTCGGGAGTATTAGTGAA+TGG - Chr7:78593256-78593275 MsG0780040513.01.T01:CDS 40.0%
!! TGATGATGATGGTGAATGAG+AGG + Chr7:78591007-78591026 None:intergenic 40.0%
!!! AATTTTCTTTGGTCTTGCGG+TGG - Chr7:78593959-78593978 MsG0780040513.01.T01:intron 40.0%
ACTAGGGATGAGAATAGACC+AGG + Chr7:78592905-78592924 None:intergenic 45.0%
CAAGGACCAGAGAATCTGAT+TGG + Chr7:78591406-78591425 None:intergenic 45.0%
CATACTCCTCTATTCCCATG+TGG - Chr7:78591280-78591299 MsG0780040513.01.T01:intron 45.0%
CTCAAATAGGTCGGCCTAAT+AGG - Chr7:78592743-78592762 MsG0780040513.01.T01:intron 45.0%
GATTATGGAGCTAAAGGGGA+TGG - Chr7:78591176-78591195 MsG0780040513.01.T01:CDS 45.0%
GCATGGGTCAAATTCTCACT+AGG + Chr7:78592922-78592941 None:intergenic 45.0%
GGTGGCAAAACTCATGCAAA+AGG - Chr7:78591679-78591698 MsG0780040513.01.T01:intron 45.0%
GTGCATGTTTGGTATCTTGG+TGG + Chr7:78593595-78593614 None:intergenic 45.0%
TACAGCTTCTGGTCTCATTG+TGG - Chr7:78592174-78592193 MsG0780040513.01.T01:CDS 45.0%
TCTTGCGGTGGTTAAATGCA+GGG - Chr7:78593971-78593990 MsG0780040513.01.T01:intron 45.0%
TGGTCAAACTGATGACACAC+AGG - Chr7:78591196-78591215 MsG0780040513.01.T01:CDS 45.0%
TGGTCCGCAAGTTATGTTTG+TGG + Chr7:78592487-78592506 None:intergenic 45.0%
TGTATCCCACATGGGAATAG+AGG + Chr7:78591289-78591308 None:intergenic 45.0%
TTTCAATGAGCCGCAGTTTG+GGG + Chr7:78594416-78594435 None:intergenic 45.0%
! ACAAACATAACTTGCGGACC+AGG - Chr7:78592486-78592505 MsG0780040513.01.T01:intron 45.0%
! AGTGTTGGACCAATAGATGG+AGG - Chr7:78593816-78593835 MsG0780040513.01.T01:CDS 45.0%
! ATATGATGGAGAACCAGCCA+AGG - Chr7:78594345-78594364 MsG0780040513.01.T01:CDS 45.0%
! TTGTTGCATATAGCCTTGGC+TGG + Chr7:78594361-78594380 None:intergenic 45.0%
!! TGATGATGGTGAATGAGAGG+AGG + Chr7:78591004-78591023 None:intergenic 45.0%
ACCGGAGGATAGTCCTAACA+CGG - Chr7:78592201-78592220 MsG0780040513.01.T01:intron 50.0%
ATTTGACCCATGCTCACGCT+AGG - Chr7:78592929-78592948 MsG0780040513.01.T01:CDS 50.0%
GAGGATAGTCCTAACACGGA+TGG - Chr7:78592205-78592224 MsG0780040513.01.T01:intron 50.0%
GGTTAAATGCAGGGAGGTTC+AGG - Chr7:78593980-78593999 MsG0780040513.01.T01:intron 50.0%
GTCGGCCTAATAGGTCTAAG+AGG - Chr7:78592752-78592771 MsG0780040513.01.T01:intron 50.0%
GTCTTGCGGTGGTTAAATGC+AGG - Chr7:78593970-78593989 MsG0780040513.01.T01:intron 50.0%
TACTCCCGAAACAATGTCCC+TGG + Chr7:78593248-78593267 None:intergenic 50.0%
TAGTTCGCTACCTGATGCCA+TGG + Chr7:78592512-78592531 None:intergenic 50.0%
TCAGGCATTCGAGAAGGCTT+GGG - Chr7:78591315-78591334 MsG0780040513.01.T01:intron 50.0%
TCCGTGTTAGGACTATCCTC+CGG + Chr7:78592205-78592224 None:intergenic 50.0%
TGGTCTCATTGTGGCATCAC+CGG - Chr7:78592183-78592202 MsG0780040513.01.T01:CDS 50.0%
TTCAGGCATTCGAGAAGGCT+TGG - Chr7:78591314-78591333 MsG0780040513.01.T01:intron 50.0%
!! AATGGTGGTGGAACCCTAGA+CGG - Chr7:78591642-78591661 MsG0780040513.01.T01:intron 50.0%
CTTGGGGGCTGGAAAATCCA+GGG - Chr7:78593228-78593247 MsG0780040513.01.T01:CDS 55.0%
GCCTTGCAAGGATGCTCCAA+CGG - Chr7:78591842-78591861 MsG0780040513.01.T01:intron 55.0%
GGGATGAGAATAGACCAGGC+CGG + Chr7:78592901-78592920 None:intergenic 55.0%
GGTGGAACCCTAGACGGAAA+AGG - Chr7:78591648-78591667 MsG0780040513.01.T01:intron 55.0%
GTACAAGCTGCCCCAAACTG+CGG - Chr7:78594403-78594422 MsG0780040513.01.T01:CDS 55.0%
TCTCATTGTGGCATCACCGG+AGG - Chr7:78592186-78592205 MsG0780040513.01.T01:CDS 55.0%
TGCGGTGGTTAAATGCAGGG+AGG - Chr7:78593974-78593993 MsG0780040513.01.T01:intron 55.0%
! ACCGTTGGAGCATCCTTGCA+AGG + Chr7:78591846-78591865 None:intergenic 55.0%
! AGTATTGGAAGCTTGGGGGC+TGG - Chr7:78593217-78593236 MsG0780040513.01.T01:CDS 55.0%
! ATAACTTGCGGACCAGGCCA+TGG - Chr7:78592492-78592511 MsG0780040513.01.T01:intron 55.0%
! TTGGAGCATCCTTGCAAGGC+TGG + Chr7:78591842-78591861 None:intergenic 55.0%
!! AGTCTGGCTTGGTCTGTCGT+AGG - Chr7:78592860-78592879 MsG0780040513.01.T01:intron 55.0%
!! TCTAGCTCTATCGCAGCAGC+TGG - Chr7:78592262-78592281 MsG0780040513.01.T01:intron 55.0%
CATGCTCACGCTAGGCGTGA+GGG - Chr7:78592937-78592956 MsG0780040513.01.T01:CDS 60.0%
CTCACGCCTAGCGTGAGCAT+GGG + Chr7:78592938-78592957 None:intergenic 60.0%
GCTTGGGGGCTGGAAAATCC+AGG - Chr7:78593227-78593246 MsG0780040513.01.T01:CDS 60.0%
GTCGTAGGCTAGGCCTCTGT+AGG - Chr7:78592875-78592894 MsG0780040513.01.T01:intron 60.0%
TAGGCTAGGCCTCTGTAGGC+CGG - Chr7:78592879-78592898 MsG0780040513.01.T01:intron 60.0%
! GGCTTGGTCTGTCGTAGGCT+AGG - Chr7:78592865-78592884 MsG0780040513.01.T01:intron 60.0%
CCATGCTCACGCTAGGCGTG+AGG - Chr7:78592936-78592955 MsG0780040513.01.T01:CDS 65.0%
CCTCACGCCTAGCGTGAGCA+TGG + Chr7:78592939-78592958 None:intergenic 65.0%
CGCTACCTGATGCCATGGCC+TGG + Chr7:78592507-78592526 None:intergenic 65.0%
CTCACGCTAGGCGTGAGGGT+GGG - Chr7:78592941-78592960 MsG0780040513.01.T01:CDS 65.0%
TAGACCAGGCCGGCCTACAG+AGG + Chr7:78592891-78592910 None:intergenic 65.0%
GCGGACCAGGCCATGGCATC+AGG - Chr7:78592499-78592518 MsG0780040513.01.T01:intron 70.0%
GCTCACGCTAGGCGTGAGGG+TGG - Chr7:78592940-78592959 MsG0780040513.01.T01:CDS 70.0%
TAGGCCTCTGTAGGCCGGCC+TGG - Chr7:78592884-78592903 MsG0780040513.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr7 gene 78590981 78594447 78590981 ID=MsG0780040513.01;Name=MsG0780040513.01
Chr7 mRNA 78590981 78594447 78590981 ID=MsG0780040513.01.T01;Parent=MsG0780040513.01;Name=MsG0780040513.01.T01;_AED=0.49;_eAED=0.50;_QI=0|0|0|1|1|1|8|0|429
Chr7 exon 78594211 78594447 78594211 ID=MsG0780040513.01.T01:exon:381;Parent=MsG0780040513.01.T01
Chr7 exon 78593981 78594109 78593981 ID=MsG0780040513.01.T01:exon:380;Parent=MsG0780040513.01.T01
Chr7 exon 78593715 78593882 78593715 ID=MsG0780040513.01.T01:exon:379;Parent=MsG0780040513.01.T01
Chr7 exon 78593145 78593352 78593145 ID=MsG0780040513.01.T01:exon:378;Parent=MsG0780040513.01.T01
Chr7 exon 78592908 78592989 78592908 ID=MsG0780040513.01.T01:exon:377;Parent=MsG0780040513.01.T01
Chr7 exon 78592101 78592209 78592101 ID=MsG0780040513.01.T01:exon:376;Parent=MsG0780040513.01.T01
Chr7 exon 78591317 78591436 78591317 ID=MsG0780040513.01.T01:exon:375;Parent=MsG0780040513.01.T01
Chr7 exon 78590981 78591217 78590981 ID=MsG0780040513.01.T01:exon:374;Parent=MsG0780040513.01.T01
Chr7 CDS 78594211 78594447 78594211 ID=MsG0780040513.01.T01:cds;Parent=MsG0780040513.01.T01
Chr7 CDS 78593981 78594109 78593981 ID=MsG0780040513.01.T01:cds;Parent=MsG0780040513.01.T01
Chr7 CDS 78593715 78593882 78593715 ID=MsG0780040513.01.T01:cds;Parent=MsG0780040513.01.T01
Chr7 CDS 78593145 78593352 78593145 ID=MsG0780040513.01.T01:cds;Parent=MsG0780040513.01.T01
Chr7 CDS 78592908 78592989 78592908 ID=MsG0780040513.01.T01:cds;Parent=MsG0780040513.01.T01
Chr7 CDS 78592101 78592209 78592101 ID=MsG0780040513.01.T01:cds;Parent=MsG0780040513.01.T01
Chr7 CDS 78591317 78591436 78591317 ID=MsG0780040513.01.T01:cds;Parent=MsG0780040513.01.T01
Chr7 CDS 78590981 78591217 78590981 ID=MsG0780040513.01.T01:cds;Parent=MsG0780040513.01.T01
Gene Sequence

>MsG0780040513.01.T01

ATGGCTCTCCTAAGACATTTCCTCCTCTCATTCACCATCATCATCATTTCATTTGTTGCTTGCAATAGCAACTTGCAAGAGGACCCACTTATTACTACATACGTTGATGATGATGGTGGTACATTATCATTCAAGAATTTGATCAAGCAAAACACATGTGGCCTTTCCCGTTCACTTCAAATTTTTAATGTCGATGATTATGGAGCTAAAGGGGATGGTCAAACTGATGACACACAGGCATTCGAGAAGGCTTGGGAAGTAGTATGTTCTTCAGGGGAAGCAGTTTTTGTTGCACCTCAAGATAATATTTATCTACTCAAACCAATCAGATTCTCTGGTCCTTGCAAATCTAATGTATCAGTCCAGATATCTGGAATTCTCATAGCATCAAATAATCCATCAGATTACAGTGAAGATCAAGGACATTGGCTTGTATTTGCCAAAGTTCAACAACTATTAGTTAATGGTGGTGGAACCCTAGACGGAAAAGGAAACATATGGTGGCAAAACTCATGCAAAAGGAACAAAAAGAAAGCTCTGACGTTTGATAATTGCAAGGACTTGATAGTTGAGAATTTGAAGATACGAAATGCGCAACAAATCCATATTTCATTTCAGGATTCGGTTAATGTTACAGCTTCTGGTCTCATTGTGGCATCACCGGAGGATAGTCCTAACACGGATGGAATTCATGTCACCAATACCCAAAACATCAAAATCTCTAGCTCTATCGCAGCAGCTGGGGACGATTGTATATCAATTGTAGATGGATCTAGAAATGTAGAAGCCACAAACATAACTTGCGGACCAGGCCATGGCATCAGTATTGGAAGCTTGGGGGCTGGAAAATCCAGGGACATTGTTTCGGGAGTATTAGTGAATGGAGCTAAGATTTCTGGAACTACAAATGGAGTTAGAATTAAGACTTGGCCGGGAGGTTCAGGAAGTGCTAGCAACATCACATTTCAGAACATTGAAATGGACAATGTGACCAACCCTATAATAATTGACCAAAATTACTGTGACAAGAAAAAAAAGCCATGTAAACAAATGGACTCTGCGGTCCAAATTAGCAATGTGTCATACCTGAATATAACAGGTAAAAGTGCTTCTGATGTAGCAGTGAAGTTTGATTGCAGTAAGAAATTTCCATGCAAGGAGATAGAAATGCAGAACATAGACTTGATATATGATGGAGAACCAGCCAAGGCTATATGCAACAATGTTCAGTTGTCTTCTTACACAGTACAAGCTGCCCCAAACTGCGGCTCATTGAAATATACAAATTAA
Protein sequence

>MsG0780040513.01.T01

MALLRHFLLSFTIIIISFVACNSNLQEDPLITTYVDDDGGTLSFKNLIKQNTCGLSRSLQIFNVDDYGAKGDGQTDDTQAFEKAWEVVCSSGEAVFVAPQDNIYLLKPIRFSGPCKSNVSVQISGILIASNNPSDYSEDQGHWLVFAKVQQLLVNGGGTLDGKGNIWWQNSCKRNKKKALTFDNCKDLIVENLKIRNAQQIHISFQDSVNVTASGLIVASPEDSPNTDGIHVTNTQNIKISSSIAAAGDDCISIVDGSRNVEATNITCGPGHGISIGSLGAGKSRDIVSGVLVNGAKISGTTNGVRIKTWPGGSGSASNITFQNIEMDNVTNPIIIDQNYCDKKKKPCKQMDSAVQISNVSYLNITGKSASDVAVKFDCSKKFPCKEIEMQNIDLIYDGEPAKAICNNVQLSSYTVQAAPNCGSLKYTN*