AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780040528.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040528.01.T01 MTR_7g092190 82.902 193 20 2 1 180 96 288 5.71e-110 315
MsG0780040528.01.T02 MTR_7g092190 93.956 182 11 0 2 183 1 182 1.40e-123 351
MsG0780040528.01.T02 MTR_7g070220 59.341 91 30 1 3 86 50 140 3.58e-30 115
MsG0780040528.01.T02 MTR_1g023170 71.795 78 22 0 14 91 23 100 5.57e-30 111
MsG0780040528.01.T02 MTR_0939s0010 58.974 78 32 0 24 101 58 135 3.65e-28 105
MsG0780040528.01.T02 MTR_2g089170 64.706 68 24 0 24 91 58 125 1.30e-27 103
MsG0780040528.01.T02 MTR_5g082950 72.059 68 19 0 19 86 54 121 1.47e-27 106
MsG0780040528.01.T02 MTR_5g083340 66.667 69 23 0 24 92 78 146 2.74e-27 107
MsG0780040528.01.T02 MTR_8g090350 38.636 176 81 3 14 169 96 264 6.69e-27 103
MsG0780040528.01.T02 MTR_5g062700 56.311 103 43 2 3 105 146 246 5.23e-26 103
MsG0780040528.01.T02 MTR_3g112440 46.565 131 61 1 14 135 22 152 8.99e-26 99.8
MsG0780040528.01.T02 MTR_3g074130 64.557 79 25 2 31 107 150 227 3.00e-25 100
MsG0780040528.01.T02 MTR_5g083330 67.188 64 21 0 31 94 35 98 1.53e-23 95.5
MsG0780040528.01.T02 MTR_7g020980 58.571 70 29 0 31 100 51 120 1.13e-22 90.1
MsG0780040528.01.T02 MTR_3g090760 69.643 56 17 0 31 86 113 168 5.02e-22 92.0
MsG0780040528.01.T02 MTR_7g021010 66.667 57 19 0 31 87 51 107 8.98e-22 87.8
MsG0780040528.01.T02 MTR_4g086220 65.000 60 21 0 31 90 96 155 9.21e-22 89.4
MsG0780040528.01.T02 MTR_4g008860 65.517 58 20 0 31 88 8 65 1.34e-21 87.8
MsG0780040528.01.T02 MTR_7g021010 66.667 57 19 0 31 87 12 68 1.52e-21 86.3
MsG0780040528.01.T02 MTR_3g102100 53.425 73 34 0 31 103 45 117 1.97e-21 87.0
MsG0780040528.01.T02 MTR_2g090235 67.797 59 19 0 31 89 218 276 2.08e-21 90.9
MsG0780040528.01.T02 MTR_4g086160 66.667 57 19 0 31 87 96 152 2.78e-21 87.8
MsG0780040528.01.T02 MTR_1g090170 56.250 80 26 2 11 90 228 298 2.88e-21 90.5
MsG0780040528.01.T02 MTR_1g090170 56.250 80 26 2 11 90 141 211 3.78e-21 89.4
MsG0780040528.01.T02 MTR_2g105380 40.458 131 69 3 30 152 116 245 4.90e-21 89.4
MsG0780040528.01.T02 MTR_4g086165 66.667 57 19 0 31 87 82 138 5.77e-21 86.7
MsG0780040528.01.T02 MTR_5g009620 66.071 56 19 0 31 86 112 167 7.15e-21 88.2
MsG0780040528.01.T02 MTR_2g435590 53.012 83 38 1 6 88 72 153 7.42e-21 87.4
MsG0780040528.01.T02 MTR_4g086190 63.333 60 22 0 31 90 96 155 8.99e-21 86.7
MsG0780040528.01.T02 MTR_5g016750 48.864 88 43 1 15 100 7 94 1.14e-20 85.1
MsG0780040528.01.T02 MTR_6g088405 64.407 59 21 0 31 89 44 102 1.28e-20 85.9
MsG0780040528.01.T02 MTR_5g012910 61.017 59 23 0 31 89 28 86 2.17e-20 84.3
MsG0780040528.01.T02 MTR_1g079630 50.000 84 26 1 14 97 7 74 3.10e-20 83.2
MsG0780040528.01.T02 MTR_3g106290 63.793 58 21 0 31 88 8 65 4.44e-20 84.0
MsG0780040528.01.T02 MTR_7g046260 48.235 85 44 0 5 89 35 119 4.89e-20 84.7
MsG0780040528.01.T02 MTR_1g028560 66.071 56 19 0 31 86 115 170 5.00e-20 86.7
MsG0780040528.01.T02 MTR_8g022820 62.712 59 22 0 30 88 123 181 5.09e-20 86.7
MsG0780040528.01.T02 MTR_8g022820 62.712 59 22 0 30 88 123 181 5.09e-20 86.7
MsG0780040528.01.T02 MTR_8g022820 62.712 59 22 0 30 88 122 180 5.37e-20 86.7
MsG0780040528.01.T02 MTR_8g092460 65.517 58 20 0 30 87 144 201 5.73e-20 85.9
MsG0780040528.01.T02 MTR_1g019110 62.712 59 22 0 31 89 44 102 6.80e-20 83.2
MsG0780040528.01.T02 MTR_4g088005 62.712 59 21 1 31 88 57 115 9.91e-20 81.3
MsG0780040528.01.T02 MTR_1g087920 62.069 58 22 0 31 88 77 134 1.23e-19 84.7
MsG0780040528.01.T02 MTR_4g078710 61.404 57 22 0 31 87 28 84 2.00e-19 82.8
MsG0780040528.01.T02 MTR_5g075570 54.412 68 31 0 31 98 124 191 2.07e-19 84.0
MsG0780040528.01.T02 MTR_8g013860 59.322 59 24 0 31 89 47 105 3.00e-19 82.0
MsG0780040528.01.T02 MTR_3g110205 61.017 59 23 0 31 89 43 101 3.97e-19 81.3
MsG0780040528.01.T02 MTR_8g006410 61.017 59 23 0 31 89 52 110 4.41e-19 81.6
MsG0780040528.01.T02 MTR_2g014340 59.322 59 24 0 29 87 17 75 4.83e-19 81.3
MsG0780040528.01.T02 MTR_3g053690 61.667 60 23 0 31 90 27 86 5.08e-19 81.6
MsG0780040528.01.T02 MTR_2g014300 34.694 147 89 3 26 165 10 156 5.86e-19 80.5
MsG0780040528.01.T02 MTR_4g100650 59.322 59 24 0 31 89 74 132 6.77e-19 82.0
MsG0780040528.01.T02 MTR_7g117690 49.425 87 42 1 2 88 1 85 7.70e-19 80.1
MsG0780040528.01.T02 MTR_8g102800 61.017 59 23 0 31 89 37 95 8.54e-19 81.3
MsG0780040528.01.T02 MTR_2g078680 63.158 57 21 0 31 87 31 87 9.69e-19 80.5
MsG0780040528.01.T02 MTR_2g101340 46.988 83 40 1 11 89 17 99 9.89e-19 80.5
MsG0780040528.01.T02 MTR_8g099215 64.286 56 20 0 31 86 107 162 9.94e-19 82.4
MsG0780040528.01.T02 MTR_4g114570 59.016 61 25 0 31 91 7 67 2.44e-18 79.7
MsG0780040528.01.T02 MTR_2g015050 54.167 72 32 1 31 101 134 205 3.05e-18 80.5
MsG0780040528.01.T02 MTR_4g100380 54.667 75 25 2 14 87 136 202 5.38e-18 79.7
MsG0780040528.01.T02 MTR_7g081815 55.224 67 29 1 31 96 61 127 5.95e-18 78.6
MsG0780040528.01.T02 MTR_1g070070 62.712 59 21 1 31 88 21 79 6.47e-18 77.0
MsG0780040528.01.T02 MTR_4g010640 57.143 63 27 0 31 93 7 69 7.39e-18 78.6
MsG0780040528.01.T02 MTR_2g103700 61.404 57 22 0 31 87 7 63 8.18e-18 77.4
MsG0780040528.01.T02 MTR_4g100420 67.241 58 18 1 31 87 157 214 8.29e-18 80.1
MsG0780040528.01.T02 MTR_4g082345 39.098 133 67 4 31 149 48 180 1.06e-17 79.7
MsG0780040528.01.T02 MTR_8g006840 58.333 60 24 1 31 89 125 184 1.06e-17 77.8
MsG0780040528.01.T02 MTR_1g014780 51.429 70 34 0 31 100 38 107 1.39e-17 78.2
MsG0780040528.01.T02 MTR_7g081795 58.333 60 24 1 31 89 60 119 1.42e-17 77.4
MsG0780040528.01.T02 MTR_7g081805 58.333 60 24 1 31 89 61 120 1.44e-17 77.8
MsG0780040528.01.T02 MTR_8g027465 55.882 68 28 1 20 87 30 95 1.76e-17 76.6
MsG0780040528.01.T02 MTR_4g100450 65.517 58 19 1 31 87 154 211 1.99e-17 79.0
MsG0780040528.01.T02 MTR_1g014860 51.429 70 34 0 31 100 22 91 2.23e-17 77.4
MsG0780040528.01.T02 MTR_1g048610 50.000 78 32 2 31 101 89 166 2.49e-17 77.4
MsG0780040528.01.T02 MTR_1g074310 56.164 73 28 2 19 87 6 78 2.83e-17 75.1
MsG0780040528.01.T02 MTR_2g015040 60.345 58 22 1 31 87 63 120 2.99e-17 75.5
MsG0780040528.01.T02 MTR_8g006825 56.667 60 25 1 31 89 96 155 4.15e-17 76.3
MsG0780040528.01.T02 MTR_1g014820 58.621 58 24 0 31 88 27 84 5.54e-17 77.0
MsG0780040528.01.T02 MTR_1g014800 56.897 58 25 0 31 88 31 88 6.97e-17 75.9
MsG0780040528.01.T02 MTR_8g006815 55.000 60 26 1 31 89 96 155 1.02e-16 75.1
MsG0780040528.01.T02 MTR_4g111915 45.455 88 43 2 14 101 39 121 1.74e-16 73.2
MsG0780040528.01.T02 MTR_7g085810 43.011 93 52 1 2 93 1 93 2.90e-16 75.1
MsG0780040528.01.T02 MTR_4g035430 56.897 58 25 0 31 88 32 89 2.99e-16 74.3
MsG0780040528.01.T02 MTR_6g088425 64.407 59 21 0 31 89 49 107 4.27e-16 74.3
MsG0780040528.01.T02 MTR_4g112490 45.455 88 43 2 14 101 39 121 6.00e-16 73.2
MsG0780040528.01.T02 MTR_4g054360 49.383 81 30 2 9 88 112 182 6.15e-16 74.3
MsG0780040528.01.T02 MTR_2g438180 65.517 58 19 1 31 87 14 71 6.79e-16 71.2
MsG0780040528.01.T02 MTR_1g074230 52.113 71 31 2 21 88 7 77 8.40e-16 71.2
MsG0780040528.01.T02 MTR_5g085070 56.140 57 25 0 31 87 51 107 1.26e-15 73.6
MsG0780040528.01.T02 MTR_6g465850 60.714 56 22 0 31 86 63 118 1.29e-15 73.6
MsG0780040528.01.T02 MTR_5g085100 57.895 57 24 0 31 87 46 102 1.49e-15 73.6
MsG0780040528.01.T02 MTR_5g032820 58.929 56 23 0 31 86 46 101 1.79e-15 73.9
MsG0780040528.01.T02 MTR_2g016730 51.389 72 33 1 31 100 23 94 2.04e-15 73.6
MsG0780040528.01.T02 MTR_1g006660 61.667 60 23 0 31 90 47 106 2.27e-15 72.4
MsG0780040528.01.T02 MTR_7g096700 59.322 59 23 1 31 88 20 78 2.67e-15 70.1
MsG0780040528.01.T02 MTR_8g069360 50.769 65 32 0 27 91 40 104 2.77e-15 73.6
MsG0780040528.01.T02 MTR_4g054740 55.932 59 25 1 31 88 97 155 3.23e-15 72.0
MsG0780040528.01.T02 MTR_6g465530 62.500 56 21 0 31 86 33 88 4.27e-15 70.9
MsG0780040528.01.T02 MTR_7g084370 50.746 67 33 0 31 97 42 108 4.46e-15 72.0
MsG0780040528.01.T02 MTR_1g101600 60.714 56 22 0 31 86 41 96 5.24e-15 70.5
MsG0780040528.01.T02 MTR_6g466130 58.929 56 23 0 31 86 66 121 8.22e-15 70.5
MsG0780040528.01.T02 MTR_2g043050 54.098 61 28 0 28 88 16 76 8.51e-15 70.5
MsG0780040528.01.T02 MTR_4g102670 58.621 58 23 1 31 88 15 71 9.45e-15 69.3
MsG0780040528.01.T02 MTR_6g465510 60.714 56 22 0 31 86 33 88 1.15e-14 69.7
MsG0780040528.01.T02 MTR_7g096750 57.627 59 24 1 31 88 20 78 1.52e-14 67.8
MsG0780040528.01.T02 MTR_8g032610 57.143 56 24 0 31 86 27 82 1.72e-14 70.9
MsG0780040528.01.T02 MTR_1g090290 56.897 58 24 1 31 87 113 170 2.28e-14 68.9
MsG0780040528.01.T02 MTR_6g465690 58.929 56 23 0 31 86 63 118 2.83e-14 69.7
MsG0780040528.01.T02 MTR_8g085960 53.125 64 28 1 30 93 24 85 3.81e-14 68.9
MsG0780040528.01.T02 MTR_6g029180 44.706 85 46 1 2 86 5 88 3.83e-14 69.7
MsG0780040528.01.T02 MTR_1g070015 54.386 57 25 1 31 86 84 140 4.09e-14 68.6
MsG0780040528.01.T02 MTR_1g070035 52.632 57 26 1 31 86 77 133 4.72e-14 68.6
MsG0780040528.01.T02 MTR_2g043030 53.448 58 27 0 31 88 19 76 5.31e-14 67.8
MsG0780040528.01.T02 MTR_6g012970 50.769 65 32 0 22 86 29 93 5.44e-14 69.7
MsG0780040528.01.T02 MTR_7g096810 54.167 72 32 1 23 93 5 76 6.23e-14 66.2
MsG0780040528.01.T02 MTR_7g011630 44.186 86 42 2 31 110 42 127 6.71e-14 69.7
MsG0780040528.01.T02 MTR_4g054860 56.897 58 24 1 32 88 132 189 6.86e-14 68.9
MsG0780040528.01.T02 MTR_6g465460 58.929 56 23 0 31 86 54 109 8.06e-14 68.6
MsG0780040528.01.T02 MTR_6g466000 58.929 56 23 0 31 86 57 112 8.21e-14 67.8
MsG0780040528.01.T02 MTR_4g119270 49.180 61 31 0 31 91 53 113 8.32e-14 68.9
MsG0780040528.01.T02 MTR_3g105510 54.386 57 26 0 30 86 36 92 8.61e-14 68.2
MsG0780040528.01.T02 MTR_2g019750 51.786 56 27 0 31 86 50 105 9.36e-14 68.6
MsG0780040528.01.T02 MTR_1g070045 54.386 57 25 1 31 86 66 122 1.33e-13 66.2
MsG0780040528.01.T02 MTR_1g097190 53.704 54 25 0 28 81 20 73 1.45e-13 65.5
MsG0780040528.01.T02 MTR_5g008470 51.667 60 29 0 30 89 74 133 1.50e-13 66.2
MsG0780040528.01.T02 MTR_7g028925 55.172 58 23 1 31 88 29 83 1.52e-13 63.9
MsG0780040528.01.T02 MTR_6g465450 57.143 56 24 0 31 86 54 109 1.88e-13 67.0
MsG0780040528.01.T02 MTR_5g008590 62.712 59 22 0 31 89 11 69 1.99e-13 66.2
MsG0780040528.01.T02 MTR_3g062440 50.000 76 36 2 14 88 99 173 3.05e-13 66.6
MsG0780040528.01.T02 MTR_1g069985 52.632 57 26 1 31 86 75 131 3.16e-13 66.2
MsG0780040528.01.T02 MTR_2g043020 53.448 58 27 0 31 88 19 76 3.41e-13 65.9
MsG0780040528.01.T02 MTR_6g465430 57.143 56 24 0 31 86 54 109 3.52e-13 66.6
MsG0780040528.01.T02 MTR_2g085015 54.237 59 25 2 31 87 47 105 3.84e-13 65.9
MsG0780040528.01.T02 MTR_3g098580 70.175 57 17 0 31 87 76 132 3.95e-13 66.6
MsG0780040528.01.T02 MTR_6g466020 55.357 56 25 0 31 86 43 98 4.40e-13 65.1
MsG0780040528.01.T02 MTR_1g074250 51.613 62 28 1 29 88 17 78 4.86e-13 63.9
MsG0780040528.01.T02 MTR_2g043040 51.724 58 28 0 31 88 19 76 5.30e-13 65.9
MsG0780040528.01.T02 MTR_5g008790 50.000 62 29 1 30 89 17 78 5.62e-13 64.3
MsG0780040528.01.T02 MTR_3g095190 48.515 101 46 2 30 129 169 264 7.04e-13 66.6
MsG0780040528.01.T02 MTR_1g070020 52.632 57 26 1 31 86 70 126 7.25e-13 65.1
MsG0780040528.01.T02 MTR_8g023680 48.387 62 26 2 17 78 106 161 7.73e-13 66.2
MsG0780040528.01.T02 MTR_1g070000 52.727 55 25 1 33 86 86 140 8.23e-13 65.1
MsG0780040528.01.T02 MTR_3g017420 44.828 58 30 1 39 96 3 58 8.83e-13 61.6
MsG0780040528.01.T02 MTR_5g083320 48.333 60 30 1 40 99 71 129 1.48e-12 63.5
MsG0780040528.01.T02 MTR_6g465420 55.357 56 25 0 31 86 54 109 1.51e-12 65.1
MsG0780040528.01.T02 MTR_3g105480 55.556 54 24 0 33 86 33 86 2.33e-12 63.9
MsG0780040528.01.T02 MTR_5g057810 55.357 56 25 0 15 70 72 127 3.57e-12 64.3
MsG0780040528.01.T02 MTR_5g057647 55.357 56 25 0 15 70 72 127 3.57e-12 64.3
MsG0780040528.01.T02 MTR_8g023700 62.222 45 16 1 28 71 113 157 3.94e-12 64.3
MsG0780040528.01.T02 MTR_1g101550 62.069 58 21 1 31 88 57 113 1.09e-11 62.0
MsG0780040528.01.T02 MTR_5g085125 36.471 85 54 0 31 115 16 100 1.50e-11 60.8
MsG0780040528.01.T02 MTR_1g105400 56.818 44 19 0 28 71 112 155 1.71e-11 62.4
MsG0780040528.01.T02 MTR_1g012470 57.895 57 24 0 31 87 7 63 1.90e-11 60.8
MsG0780040528.01.T02 MTR_1g074290 43.617 94 45 3 15 104 5 94 2.14e-11 60.1
MsG0780040528.01.T02 MTR_1g069960 53.623 69 31 1 29 96 25 93 2.71e-11 59.7
MsG0780040528.01.T02 MTR_5g008540 47.368 57 30 0 33 89 26 82 2.86e-11 58.2
MsG0780040528.01.T02 MTR_5g009410 63.333 60 22 0 31 90 117 176 2.91e-11 61.6
MsG0780040528.01.T02 MTR_6g033255 53.571 84 31 1 6 89 3 78 3.37e-11 60.5
MsG0780040528.01.T02 MTR_5g058470 41.593 113 54 4 4 115 69 170 4.61e-11 60.8
MsG0780040528.01.T02 MTR_1g110970 58.140 43 18 0 27 69 93 135 5.68e-11 60.8
MsG0780040528.01.T02 MTR_5g053920 43.662 71 38 1 28 98 63 131 8.40e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040528.01.T01 AT3G57600 41.011 178 99 4 5 180 99 272 5.29e-35 124
MsG0780040528.01.T02 AT3G57600 73.571 140 36 1 6 144 3 142 8.86e-75 226
MsG0780040528.01.T02 AT1G75490 73.333 75 20 0 14 88 25 99 2.81e-36 126
MsG0780040528.01.T02 AT2G40340 59.574 94 38 0 6 99 47 140 5.72e-34 122
MsG0780040528.01.T02 AT5G18450 66.667 84 28 0 5 88 8 91 6.21e-34 122
MsG0780040528.01.T02 AT2G40340 59.574 94 38 0 6 99 47 140 8.26e-34 123
MsG0780040528.01.T02 AT2G40340 59.574 94 38 0 6 99 54 147 8.91e-34 123
MsG0780040528.01.T02 AT2G40340 62.963 81 30 0 19 99 2 82 4.04e-32 117
MsG0780040528.01.T02 AT2G40340 62.963 81 30 0 19 99 2 82 4.04e-32 117
MsG0780040528.01.T02 AT2G40340 62.963 81 30 0 19 99 2 82 4.04e-32 117
MsG0780040528.01.T02 AT2G40350 59.524 84 34 0 6 89 49 132 6.63e-32 114
MsG0780040528.01.T02 AT2G40350 59.524 84 34 0 6 89 42 125 8.59e-32 113
MsG0780040528.01.T02 AT5G05410 68.750 64 20 0 24 87 72 135 2.41e-26 102
MsG0780040528.01.T02 AT5G05410 68.750 64 20 0 24 87 72 135 3.63e-26 103
MsG0780040528.01.T02 AT3G11020 70.312 64 19 0 24 87 71 134 9.34e-25 99.0
MsG0780040528.01.T02 AT1G78080 57.831 83 33 1 20 102 141 221 9.60e-24 96.7
MsG0780040528.01.T02 AT5G65130 69.492 59 18 0 31 89 111 169 1.77e-23 94.7
MsG0780040528.01.T02 AT5G65130 69.492 59 18 0 31 89 113 171 1.95e-23 94.7
MsG0780040528.01.T02 AT2G22200 71.186 59 17 0 31 89 71 129 2.42e-23 94.0
MsG0780040528.01.T02 AT4G39780 74.576 59 15 0 31 89 93 151 3.40e-23 94.0
MsG0780040528.01.T02 AT1G36060 55.814 86 32 2 23 102 130 215 3.91e-23 94.4
MsG0780040528.01.T02 AT1G22190 70.000 60 18 0 31 90 83 142 8.66e-23 92.8
MsG0780040528.01.T02 AT2G20880 63.889 72 26 0 18 89 174 245 8.74e-23 94.0
MsG0780040528.01.T02 AT4G27950 69.643 56 17 0 31 86 118 173 1.19e-22 93.6
MsG0780040528.01.T02 AT2G38340 62.651 83 23 1 14 88 53 135 1.32e-22 91.7
MsG0780040528.01.T02 AT5G61890 65.672 67 22 1 31 96 90 156 2.35e-22 91.3
MsG0780040528.01.T02 AT2G40220 73.529 68 18 0 19 86 43 110 6.38e-22 91.7
MsG0780040528.01.T02 AT4G13620 68.333 60 19 0 31 90 232 291 6.73e-22 92.0
MsG0780040528.01.T02 AT4G28140 66.154 65 22 0 24 88 136 200 7.57e-22 90.9
MsG0780040528.01.T02 AT4G11140 66.667 57 19 0 31 87 87 143 7.63e-22 90.5
MsG0780040528.01.T02 AT2G47520 55.714 70 31 0 31 100 50 119 1.78e-21 87.0
MsG0780040528.01.T02 AT4G23750 69.643 56 17 0 31 86 122 177 1.79e-21 90.5
MsG0780040528.01.T02 AT4G23750 69.643 56 17 0 31 86 122 177 1.79e-21 90.5
MsG0780040528.01.T02 AT5G53290 67.857 56 18 0 31 86 125 180 2.38e-21 90.1
MsG0780040528.01.T02 AT2G23340 56.000 75 30 1 31 102 28 102 3.90e-21 86.3
MsG0780040528.01.T02 AT5G13330 67.241 58 19 0 31 88 39 96 4.69e-21 87.0
MsG0780040528.01.T02 AT3G16770 62.712 59 22 0 31 89 79 137 6.65e-21 87.4
MsG0780040528.01.T02 AT5G25190 63.793 58 21 0 31 88 8 65 1.33e-20 85.1
MsG0780040528.01.T02 AT3G50260 62.712 59 22 0 31 89 21 79 1.34e-20 84.3
MsG0780040528.01.T02 AT2G35700 59.677 62 25 0 31 92 45 106 1.70e-20 85.1
MsG0780040528.01.T02 AT5G67190 64.407 59 21 0 31 89 21 79 1.91e-20 84.7
MsG0780040528.01.T02 AT2G33710 66.667 57 19 0 31 87 70 126 2.30e-20 85.1
MsG0780040528.01.T02 AT2G33710 66.667 57 19 0 31 87 70 126 2.82e-20 85.5
MsG0780040528.01.T02 AT4G36900 62.712 59 22 0 31 89 30 88 3.19e-20 84.3
MsG0780040528.01.T02 AT1G46768 50.649 77 38 0 31 107 31 107 3.31e-20 83.2
MsG0780040528.01.T02 AT1G46768 50.649 77 38 0 31 107 31 107 3.31e-20 83.2
MsG0780040528.01.T02 AT1G46768 50.649 77 38 0 31 107 31 107 3.49e-20 82.8
MsG0780040528.01.T02 AT3G15210 53.165 79 36 1 31 109 25 102 4.85e-20 84.3
MsG0780040528.01.T02 AT3G61630 67.857 56 18 0 31 86 105 160 5.12e-20 86.3
MsG0780040528.01.T02 AT4G06746 63.793 58 21 0 31 88 36 93 6.00e-20 82.4
MsG0780040528.01.T02 AT1G72360 48.810 84 40 1 5 88 2 82 6.48e-20 84.0
MsG0780040528.01.T02 AT2G46310 67.857 56 18 0 31 86 99 154 9.98e-20 85.1
MsG0780040528.01.T02 AT2G44940 61.017 59 23 0 31 89 100 158 1.40e-19 84.7
MsG0780040528.01.T02 AT4G32800 59.322 59 24 0 31 89 19 77 2.06e-19 82.8
MsG0780040528.01.T02 AT1G71450 52.564 78 33 1 14 91 11 84 2.07e-19 82.0
MsG0780040528.01.T02 AT4G16750 56.452 62 27 0 31 92 40 101 2.32e-19 81.6
MsG0780040528.01.T02 AT3G16280 57.377 61 26 0 31 91 61 121 3.09e-19 82.8
MsG0780040528.01.T02 AT3G16280 57.377 61 26 0 31 91 79 139 3.80e-19 82.8
MsG0780040528.01.T02 AT2G44840 53.521 71 32 1 20 89 81 151 5.65e-19 81.6
MsG0780040528.01.T02 AT1G21910 61.404 57 22 0 31 87 50 106 7.09e-19 81.6
MsG0780040528.01.T02 AT3G60490 57.627 59 25 0 31 89 71 129 7.82e-19 82.0
MsG0780040528.01.T02 AT1G03800 50.667 75 37 0 22 96 44 118 9.73e-19 81.6
MsG0780040528.01.T02 AT2G25820 59.322 59 24 0 31 89 26 84 1.20e-18 80.9
MsG0780040528.01.T02 AT1G15360 54.795 73 30 1 31 103 7 76 1.45e-18 80.1
MsG0780040528.01.T02 AT1G15360 54.795 73 30 1 31 103 7 76 1.45e-18 80.1
MsG0780040528.01.T02 AT1G72360 54.545 66 30 0 23 88 66 131 1.51e-18 81.3
MsG0780040528.01.T02 AT1G22810 58.065 62 24 1 30 89 13 74 1.58e-18 78.6
MsG0780040528.01.T02 AT1G72360 54.545 66 30 0 23 88 68 133 1.59e-18 81.3
MsG0780040528.01.T02 AT5G47230 68.966 58 17 1 31 87 156 213 2.18e-18 81.6
MsG0780040528.01.T02 AT5G44210 61.404 57 22 0 31 87 33 89 3.30e-18 79.3
MsG0780040528.01.T02 AT1G28360 61.017 59 23 0 29 87 10 68 3.78e-18 79.0
MsG0780040528.01.T02 AT5G11590 59.322 59 24 0 31 89 51 109 5.35e-18 79.3
MsG0780040528.01.T02 AT1G71520 55.224 67 26 1 31 93 14 80 7.47e-18 76.6
MsG0780040528.01.T02 AT5G25810 57.627 59 25 0 31 89 36 94 7.48e-18 78.6
MsG0780040528.01.T02 AT1G50640 61.404 57 22 0 31 87 28 84 7.94e-18 78.6
MsG0780040528.01.T02 AT5G21960 59.677 62 25 0 26 87 2 63 1.10e-17 78.2
MsG0780040528.01.T02 AT1G71130 62.295 61 18 1 31 86 79 139 1.40e-17 76.6
MsG0780040528.01.T02 AT5G25390 47.887 71 37 0 28 98 4 74 1.65e-17 77.0
MsG0780040528.01.T02 AT4G17500 63.793 58 20 1 31 87 148 205 1.83e-17 78.6
MsG0780040528.01.T02 AT5G47220 63.793 58 20 1 31 87 117 174 1.84e-17 78.2
MsG0780040528.01.T02 AT3G20310 59.649 57 23 0 31 87 27 83 1.89e-17 78.2
MsG0780040528.01.T02 AT1G01250 54.054 74 29 1 20 88 29 102 2.03e-17 77.0
MsG0780040528.01.T02 AT5G43410 61.017 59 22 1 31 88 15 73 5.27e-17 74.3
MsG0780040528.01.T02 AT1G22985 52.778 72 31 1 30 98 74 145 5.43e-17 75.1
MsG0780040528.01.T02 AT5G51190 54.167 72 32 1 17 87 58 129 8.46e-17 75.9
MsG0780040528.01.T02 AT4G25490 64.286 56 20 0 31 86 48 103 1.95e-16 74.7
MsG0780040528.01.T02 AT4G25470 64.286 56 20 0 31 86 51 106 3.31e-16 74.3
MsG0780040528.01.T02 AT4G17490 63.793 58 20 1 31 87 137 194 3.44e-16 75.1
MsG0780040528.01.T02 AT1G77200 59.677 62 25 0 31 92 43 104 4.03e-16 74.3
MsG0780040528.01.T02 AT2G36450 61.017 59 22 1 31 88 15 73 4.19e-16 73.2
MsG0780040528.01.T02 AT1G74930 56.897 58 25 0 31 88 21 78 4.86e-16 73.2
MsG0780040528.01.T02 AT5G07310 54.878 82 36 1 31 111 92 173 5.47e-16 74.3
MsG0780040528.01.T02 AT4G25480 62.500 56 21 0 31 86 51 106 8.20e-16 73.2
MsG0780040528.01.T02 AT3G23230 55.385 65 28 1 25 88 14 78 1.00e-15 71.2
MsG0780040528.01.T02 AT1G24590 37.383 107 53 2 31 123 58 164 1.45e-15 73.9
MsG0780040528.01.T02 AT1G28370 54.237 59 27 0 29 87 56 114 1.47e-15 72.4
MsG0780040528.01.T02 AT1G28370 50.794 63 31 0 31 93 20 82 1.48e-15 71.2
MsG0780040528.01.T02 AT1G12980 49.254 67 34 0 22 88 48 114 1.55e-15 73.9
MsG0780040528.01.T02 AT5G61600 60.345 58 22 1 31 87 88 145 1.98e-15 72.4
MsG0780040528.01.T02 AT5G51990 60.714 56 22 0 31 86 54 109 2.31e-15 72.0
MsG0780040528.01.T02 AT1G19210 48.529 68 35 0 21 88 2 69 2.51e-15 71.2
MsG0780040528.01.T02 AT5G25390 46.479 71 35 1 28 98 4 71 4.71e-15 70.5
MsG0780040528.01.T02 AT1G28160 55.172 58 26 0 31 88 39 96 8.54e-15 70.9
MsG0780040528.01.T02 AT5G13910 55.357 56 25 0 31 86 20 75 9.23e-15 70.1
MsG0780040528.01.T02 AT1G12890 52.381 63 30 0 31 93 21 83 1.18e-14 70.1
MsG0780040528.01.T02 AT3G23240 56.140 57 24 1 31 86 82 138 1.35e-14 69.7
MsG0780040528.01.T02 AT4G31060 44.304 79 43 1 9 87 6 83 1.65e-14 68.9
MsG0780040528.01.T02 AT5G18560 35.200 125 77 2 16 136 40 164 1.85e-14 70.9
MsG0780040528.01.T02 AT5G07580 58.621 58 23 1 31 87 110 167 2.52e-14 68.9
MsG0780040528.01.T02 AT5G19790 50.000 70 34 1 30 98 21 90 3.38e-14 69.3
MsG0780040528.01.T02 AT4G18450 64.000 50 17 1 31 79 110 159 5.60e-14 69.3
MsG0780040528.01.T02 AT4G34410 60.938 64 25 0 31 94 136 199 7.34e-14 68.6
MsG0780040528.01.T02 AT2G31230 56.897 58 24 1 31 87 86 143 7.58e-14 68.2
MsG0780040528.01.T02 AT1G68550 74.359 39 10 0 33 71 115 153 8.32e-14 68.9
MsG0780040528.01.T02 AT1G68550 74.359 39 10 0 33 71 115 153 8.32e-14 68.9
MsG0780040528.01.T02 AT1G77640 57.812 64 27 0 30 93 42 105 1.31e-13 67.8
MsG0780040528.01.T02 AT1G43160 68.421 57 18 0 31 87 61 117 2.96e-13 65.9
MsG0780040528.01.T02 AT5G64750 62.000 50 19 0 38 87 192 241 3.44e-13 67.4
MsG0780040528.01.T02 AT1G33760 62.712 59 22 0 31 89 20 78 1.45e-12 63.9
MsG0780040528.01.T02 AT1G53910 55.556 72 32 0 30 101 124 195 3.95e-12 64.3
MsG0780040528.01.T02 AT1G53910 55.556 72 32 0 30 101 124 195 3.95e-12 64.3
MsG0780040528.01.T02 AT1G53910 55.556 72 32 0 30 101 122 193 4.00e-12 64.3
MsG0780040528.01.T02 AT5G52020 59.322 59 23 1 31 89 65 122 8.26e-12 62.4
MsG0780040528.01.T02 AT5G50080 65.517 58 20 0 31 88 86 143 9.36e-12 62.4
MsG0780040528.01.T02 AT5G50080 65.517 58 20 0 31 88 77 134 9.87e-12 62.0
MsG0780040528.01.T02 AT5G11190 52.308 65 31 0 31 95 7 71 1.66e-11 60.8
MsG0780040528.01.T02 AT1G64380 61.905 63 24 0 31 93 136 198 2.07e-11 62.4
MsG0780040528.01.T02 AT3G14230 60.938 64 25 0 30 93 122 185 4.71e-11 61.2
MsG0780040528.01.T02 AT3G14230 64.407 59 21 0 30 88 123 181 4.76e-11 61.2
MsG0780040528.01.T02 AT1G63030 51.786 56 27 0 31 86 30 85 4.87e-11 59.7
MsG0780040528.01.T02 AT1G63030 51.786 56 27 0 31 86 30 85 4.87e-11 59.7
MsG0780040528.01.T02 AT3G14230 64.407 59 21 0 30 88 127 185 5.69e-11 61.2
MsG0780040528.01.T02 AT1G12610 50.000 56 28 0 31 86 30 85 5.99e-11 59.7

Find 68 sgRNAs with CRISPR-Local

Find 77 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCAGACATGAGTGTTAAT+TGG 0.204470 7:+78818275 MsG0780040528.01.T01:CDS
CAGAGTCTAGTTCTCTTCTT+TGG 0.255682 7:-78817690 None:intergenic
AGAGATGATAATGAACAATT+AGG 0.298212 7:+78818247 MsG0780040528.01.T01:CDS
TCCTTTCTTCCATGGTTTCA+AGG 0.319132 7:-78817571 None:intergenic
AAATGGAAGTTGAGAAATTA+AGG 0.327518 7:-78818381 None:intergenic
TCCAATTCAACTATGAAAAC+TGG 0.335348 7:+78817822 MsG0780040528.01.T02:CDS
CTGGTTGGTCCTTTCTTCCA+TGG 0.343239 7:-78817579 None:intergenic
TAAGATGCTTGGAGATCTTC+AGG 0.344696 7:+78818105 MsG0780040528.01.T01:CDS
AGAAATTAAGGTGGTCATTT+GGG 0.344782 7:-78818369 None:intergenic
TAATTTCTCAACTTCCATTT+GGG 0.347112 7:+78818384 MsG0780040528.01.T01:CDS
GAGAAATTAAGGTGGTCATT+TGG 0.348338 7:-78818370 None:intergenic
TTAATTTCTCAACTTCCATT+TGG 0.351333 7:+78818383 MsG0780040528.01.T01:CDS
TTTGCATGTGTGGAAGATTA+AGG 0.358525 7:-78817794 None:intergenic
ATTTCAATGTTTCCTTCTTG+TGG 0.363212 7:+78817876 MsG0780040528.01.T01:CDS
TTGAGGGCCACCTTTGCCTC+TGG 0.380298 7:-78817598 None:intergenic
TTCAGACATGAGTGTTAATT+GGG 0.381842 7:+78818276 MsG0780040528.01.T01:CDS
ATCGAGATGCATGAATTTGC+GGG 0.387497 7:+78818307 MsG0780040528.01.T01:CDS
CCTTTCTTCCATGGTTTCAA+GGG 0.398128 7:-78817570 None:intergenic
CTTCTTTGGCTCTCTTATCT+CGG 0.399919 7:-78817676 None:intergenic
ATTGAAATGAAATTCTTTGA+AGG 0.404024 7:-78817861 None:intergenic
TTCTGAATCTCTGCTGCCAT+TGG 0.410356 7:-78818014 None:intergenic
GAGGCTGCAAGGAGACTCTA+TGG 0.413244 7:+78817759 MsG0780040528.01.T02:CDS
AATTGTTCATTATCATCTCT+TGG 0.416219 7:-78818244 None:intergenic
CCCTTGAAACCATGGAAGAA+AGG 0.432798 7:+78817570 MsG0780040528.01.T02:CDS
GGGCCACCTTTGCCTCTGGT+TGG 0.461484 7:-78817594 None:intergenic
TTGGAGTGTGTTTGCATGTG+TGG 0.478256 7:-78817804 None:intergenic
GCATGAATTTGCGGGTATTG+AGG 0.481970 7:+78818315 MsG0780040528.01.T01:CDS
TAAACTCTTGTAGCCTCTGA+TGG 0.486745 7:-78817938 None:intergenic
TCCTGAACTCTCAGTTTGCT+CGG 0.486789 7:-78818197 None:intergenic
GATCGAGATGCATGAATTTG+CGG 0.490224 7:+78818306 MsG0780040528.01.T01:CDS
ACATCGGCAAATAAGATGCT+TGG 0.501343 7:+78818094 MsG0780040528.01.T01:CDS
TTGGGTCATATGCTTCAAGA+TGG 0.503264 7:-78818351 None:intergenic
TCCGAGCAAACTGAGAGTTC+AGG 0.511697 7:+78818196 MsG0780040528.01.T01:CDS
ACATGAGTTTCTTCAACAGA+TGG 0.516367 7:+78818150 MsG0780040528.01.T01:CDS
AGTTTCTTAAAAGTCCCAAA+TGG 0.517553 7:-78818398 None:intergenic
CTTTCTTCCATGGTTTCAAG+GGG 0.523269 7:-78817569 None:intergenic
GAGGTGTTCGTCAAAGAACA+TGG 0.541929 7:+78817640 MsG0780040528.01.T02:CDS
GGAAGATTAAGGTATGCATC+TGG 0.542811 7:-78817783 None:intergenic
AAGAGAACTAGACTCTGGCT+TGG 0.550459 7:+78817696 MsG0780040528.01.T02:CDS
GTCATATGCTTCAAGATGGG+TGG 0.553547 7:-78818347 None:intergenic
AAAGGACCAACCAGAGGCAA+AGG 0.555591 7:+78817588 MsG0780040528.01.T02:CDS
TGATGGATCAAATGAACGCT+AGG 0.558791 7:-78817921 None:intergenic
GACAGCGGAAGAAGCTGCCA+TGG 0.563383 7:+78817728 MsG0780040528.01.T02:CDS
TGGGTCATATGCTTCAAGAT+GGG 0.567212 7:-78818350 None:intergenic
CATGAGTTTCTTCAACAGAT+GGG 0.568080 7:+78818151 MsG0780040528.01.T01:CDS
CAGATGGGAATACTGAAAGA+AGG 0.569736 7:+78818166 MsG0780040528.01.T01:CDS
GGACCAACCAGAGGCAAAGG+TGG 0.582802 7:+78817591 MsG0780040528.01.T02:CDS
AGACATGAGTGTTAATTGGG+AGG 0.588605 7:+78818279 MsG0780040528.01.T01:CDS
CAAAGAAGAGAACTAGACTC+TGG 0.595270 7:+78817691 MsG0780040528.01.T02:CDS
ACATTAAGTAGTCCACAAGA+AGG 0.600636 7:-78817888 None:intergenic
TGGCTTATGATGAGGCTGCA+AGG 0.604149 7:+78817748 MsG0780040528.01.T02:CDS
GCTTGGTTCTTTCGCGACAG+CGG 0.605004 7:+78817713 MsG0780040528.01.T02:CDS
TGCAGCCTCATCATAAGCCA+TGG 0.606490 7:-78817745 None:intergenic
TAGTTCATCTAATGAACCAA+TGG 0.610449 7:+78817998 MsG0780040528.01.T01:intron
AACTCATGTAGGTCTATCTG+TGG 0.620478 7:-78818136 None:intergenic
AGGTGTTCGTCAAAGAACAT+GGG 0.628435 7:+78817641 MsG0780040528.01.T02:CDS
TCTGTTGAAGAAACTCATGT+AGG 0.630047 7:-78818147 None:intergenic
TGAAAACTGGAAAGTTCAAG+TGG 0.632655 7:+78817835 MsG0780040528.01.T01:CDS
GCGTTCATTTGATCCATCAG+AGG 0.638419 7:+78817925 MsG0780040528.01.T01:CDS
GGTGTTCGTCAAAGAACATG+GGG 0.645339 7:+78817642 MsG0780040528.01.T02:CDS
AGCTGCCATGGCTTATGATG+AGG 0.646576 7:+78817740 MsG0780040528.01.T02:CDS
ATACAGAAGATCCTTTGCCA+AGG 0.647127 7:+78818057 MsG0780040528.01.T01:CDS
TGGAAGAAAGGACCAACCAG+AGG 0.659178 7:+78817582 MsG0780040528.01.T02:CDS
TTTCTTCCATGGTTTCAAGG+GGG 0.664802 7:-78817568 None:intergenic
AATGCTTCATGCGAGTATCG+AGG 0.690187 7:+78817621 MsG0780040528.01.T02:CDS
TGGAAGTTGAGAAATTAAGG+TGG 0.707721 7:-78818378 None:intergenic
GATGCTTGGAGATCTTCAGG+AGG 0.730874 7:+78818108 MsG0780040528.01.T01:CDS
GTGTTCGTCAAAGAACATGG+GGG 0.785597 7:+78817643 MsG0780040528.01.T02:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTGAAATGAAATTCTTTGA+AGG - Chr7:78817864-78817883 None:intergenic 20.0%
! AAATGGAAGTTGAGAAATTA+AGG - Chr7:78818384-78818403 None:intergenic 25.0%
! AATTGTTCATTATCATCTCT+TGG - Chr7:78818247-78818266 None:intergenic 25.0%
! TAATTTCTCAACTTCCATTT+GGG + Chr7:78818384-78818403 MsG0780040528.01.T01:CDS 25.0%
! TTAATTTCTCAACTTCCATT+TGG + Chr7:78818383-78818402 MsG0780040528.01.T01:CDS 25.0%
!! AGAGATGATAATGAACAATT+AGG + Chr7:78818247-78818266 MsG0780040528.01.T01:CDS 25.0%
AGAAATTAAGGTGGTCATTT+GGG - Chr7:78818372-78818391 None:intergenic 30.0%
ATTTCAATGTTTCCTTCTTG+TGG + Chr7:78817876-78817895 MsG0780040528.01.T01:CDS 30.0%
GGAAAAAGATGTTCAAACAT+CGG + Chr7:78818078-78818097 MsG0780040528.01.T01:CDS 30.0%
TAGTTCATCTAATGAACCAA+TGG + Chr7:78817998-78818017 MsG0780040528.01.T01:intron 30.0%
TCCAATTCAACTATGAAAAC+TGG + Chr7:78817822-78817841 MsG0780040528.01.T02:CDS 30.0%
TTCAGACATGAGTGTTAATT+GGG + Chr7:78818276-78818295 MsG0780040528.01.T01:CDS 30.0%
TTTCAGACATGAGTGTTAAT+TGG + Chr7:78818275-78818294 MsG0780040528.01.T01:CDS 30.0%
! TCCAGTTTTCATAGTTGAAT+TGG - Chr7:78817826-78817845 None:intergenic 30.0%
! TGTTTGAACATCTTTTTCCT+TGG - Chr7:78818077-78818096 None:intergenic 30.0%
ACATGAGTTTCTTCAACAGA+TGG + Chr7:78818150-78818169 MsG0780040528.01.T01:CDS 35.0%
ACATTAAGTAGTCCACAAGA+AGG - Chr7:78817891-78817910 None:intergenic 35.0%
CATGAGTTTCTTCAACAGAT+GGG + Chr7:78818151-78818170 MsG0780040528.01.T01:CDS 35.0%
GAGAAATTAAGGTGGTCATT+TGG - Chr7:78818373-78818392 None:intergenic 35.0%
TCTGTTGAAGAAACTCATGT+AGG - Chr7:78818150-78818169 None:intergenic 35.0%
TGAAAACTGGAAAGTTCAAG+TGG + Chr7:78817835-78817854 MsG0780040528.01.T01:CDS 35.0%
TGGAAGTTGAGAAATTAAGG+TGG - Chr7:78818381-78818400 None:intergenic 35.0%
TTTGCATGTGTGGAAGATTA+AGG - Chr7:78817797-78817816 None:intergenic 35.0%
! AACATCTTTTTCCTTGGCAA+AGG - Chr7:78818071-78818090 None:intergenic 35.0%
AACTCATGTAGGTCTATCTG+TGG - Chr7:78818139-78818158 None:intergenic 40.0%
ACATCGGCAAATAAGATGCT+TGG + Chr7:78818094-78818113 MsG0780040528.01.T01:CDS 40.0%
AGACATGAGTGTTAATTGGG+AGG + Chr7:78818279-78818298 MsG0780040528.01.T01:CDS 40.0%
AGGTGTTCGTCAAAGAACAT+GGG + Chr7:78817641-78817660 MsG0780040528.01.T02:CDS 40.0%
ATACAGAAGATCCTTTGCCA+AGG + Chr7:78818057-78818076 MsG0780040528.01.T01:CDS 40.0%
ATCGAGATGCATGAATTTGC+GGG + Chr7:78818307-78818326 MsG0780040528.01.T01:CDS 40.0%
CAAAGAAGAGAACTAGACTC+TGG + Chr7:78817691-78817710 MsG0780040528.01.T02:CDS 40.0%
CAGATGGGAATACTGAAAGA+AGG + Chr7:78818166-78818185 MsG0780040528.01.T01:CDS 40.0%
CCTTTCTTCCATGGTTTCAA+GGG - Chr7:78817573-78817592 None:intergenic 40.0%
CTTTCTTCCATGGTTTCAAG+GGG - Chr7:78817572-78817591 None:intergenic 40.0%
GATCGAGATGCATGAATTTG+CGG + Chr7:78818306-78818325 MsG0780040528.01.T01:CDS 40.0%
GGAAGATTAAGGTATGCATC+TGG - Chr7:78817786-78817805 None:intergenic 40.0%
TAAACTCTTGTAGCCTCTGA+TGG - Chr7:78817941-78817960 None:intergenic 40.0%
TAAGATGCTTGGAGATCTTC+AGG + Chr7:78818105-78818124 MsG0780040528.01.T01:CDS 40.0%
TCAAAGAACATGGGGGAAAT+GGG + Chr7:78817650-78817669 MsG0780040528.01.T02:CDS 40.0%
TCCTTTCTTCCATGGTTTCA+AGG - Chr7:78817574-78817593 None:intergenic 40.0%
TGGGTCATATGCTTCAAGAT+GGG - Chr7:78818353-78818372 None:intergenic 40.0%
TTGGGTCATATGCTTCAAGA+TGG - Chr7:78818354-78818373 None:intergenic 40.0%
TTTCTTCCATGGTTTCAAGG+GGG - Chr7:78817571-78817590 None:intergenic 40.0%
! TGATGGATCAAATGAACGCT+AGG - Chr7:78817924-78817943 None:intergenic 40.0%
!! ACTCGCATGAAGCATTTTGA+GGG - Chr7:78817617-78817636 None:intergenic 40.0%
!! CAGAGTCTAGTTCTCTTCTT+TGG - Chr7:78817693-78817712 None:intergenic 40.0%
!! CTTCTTTGGCTCTCTTATCT+CGG - Chr7:78817679-78817698 None:intergenic 40.0%
!! TACTCGCATGAAGCATTTTG+AGG - Chr7:78817618-78817637 None:intergenic 40.0%
AAGAGAACTAGACTCTGGCT+TGG + Chr7:78817696-78817715 MsG0780040528.01.T02:CDS 45.0%
AGAAATCCCCCTTGAAACCA+TGG + Chr7:78817562-78817581 MsG0780040528.01.T02:CDS 45.0%
CCCTTGAAACCATGGAAGAA+AGG + Chr7:78817570-78817589 MsG0780040528.01.T02:CDS 45.0%
GCGTTCATTTGATCCATCAG+AGG + Chr7:78817925-78817944 MsG0780040528.01.T01:CDS 45.0%
GGTGTTCGTCAAAGAACATG+GGG + Chr7:78817642-78817661 MsG0780040528.01.T02:CDS 45.0%
GTCAAAGAACATGGGGGAAA+TGG + Chr7:78817649-78817668 MsG0780040528.01.T02:CDS 45.0%
GTCATATGCTTCAAGATGGG+TGG - Chr7:78818350-78818369 None:intergenic 45.0%
GTGTTCGTCAAAGAACATGG+GGG + Chr7:78817643-78817662 MsG0780040528.01.T02:CDS 45.0%
TGGTTTCAAGGGGGATTTCT+TGG - Chr7:78817562-78817581 None:intergenic 45.0%
TTCTGAATCTCTGCTGCCAT+TGG - Chr7:78818017-78818036 None:intergenic 45.0%
TTGGAGTGTGTTTGCATGTG+TGG - Chr7:78817807-78817826 None:intergenic 45.0%
! AATGCTTCATGCGAGTATCG+AGG + Chr7:78817621-78817640 MsG0780040528.01.T02:CDS 45.0%
! GAGGTGTTCGTCAAAGAACA+TGG + Chr7:78817640-78817659 MsG0780040528.01.T02:CDS 45.0%
! GCATGAATTTGCGGGTATTG+AGG + Chr7:78818315-78818334 MsG0780040528.01.T01:CDS 45.0%
! TCCTGAACTCTCAGTTTGCT+CGG - Chr7:78818200-78818219 None:intergenic 45.0%
AAAGGACCAACCAGAGGCAA+AGG + Chr7:78817588-78817607 MsG0780040528.01.T02:CDS 50.0%
AGCTGCCATGGCTTATGATG+AGG + Chr7:78817740-78817759 MsG0780040528.01.T02:CDS 50.0%
GATGCTTGGAGATCTTCAGG+AGG + Chr7:78818108-78818127 MsG0780040528.01.T01:CDS 50.0%
TCCGAGCAAACTGAGAGTTC+AGG + Chr7:78818196-78818215 MsG0780040528.01.T01:CDS 50.0%
TGCAGCCTCATCATAAGCCA+TGG - Chr7:78817748-78817767 None:intergenic 50.0%
TGGAAGAAAGGACCAACCAG+AGG + Chr7:78817582-78817601 MsG0780040528.01.T02:CDS 50.0%
TGGCTTATGATGAGGCTGCA+AGG + Chr7:78817748-78817767 MsG0780040528.01.T02:CDS 50.0%
! CTGGTTGGTCCTTTCTTCCA+TGG - Chr7:78817582-78817601 None:intergenic 50.0%
GAGGCTGCAAGGAGACTCTA+TGG + Chr7:78817759-78817778 MsG0780040528.01.T02:CDS 55.0%
! GCTTGGTTCTTTCGCGACAG+CGG + Chr7:78817713-78817732 MsG0780040528.01.T02:CDS 55.0%
GACAGCGGAAGAAGCTGCCA+TGG + Chr7:78817728-78817747 MsG0780040528.01.T02:CDS 60.0%
GGACCAACCAGAGGCAAAGG+TGG + Chr7:78817591-78817610 MsG0780040528.01.T02:CDS 60.0%
TTGAGGGCCACCTTTGCCTC+TGG - Chr7:78817601-78817620 None:intergenic 60.0%
GGGCCACCTTTGCCTCTGGT+TGG - Chr7:78817597-78817616 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr7 gene 78817546 78818414 78817546 ID=MsG0780040528.01;Name=MsG0780040528.01
Chr7 mRNA 78817834 78818414 78817834 ID=MsG0780040528.01.T01;Parent=MsG0780040528.01;Name=MsG0780040528.01.T01;_AED=0.21;_eAED=0.21;_QI=0|0|0|1|0|0|2|0|180
Chr7 exon 78817834 78817981 78817834 ID=MsG0780040528.01.T01:exon:16140;Parent=MsG0780040528.01.T01
Chr7 exon 78818020 78818414 78818020 ID=MsG0780040528.01.T01:exon:16141;Parent=MsG0780040528.01.T01
Chr7 CDS 78817834 78817981 78817834 ID=MsG0780040528.01.T01:cds;Parent=MsG0780040528.01.T01
Chr7 CDS 78818020 78818414 78818020 ID=MsG0780040528.01.T01:cds;Parent=MsG0780040528.01.T01
Chr7 mRNA 78817546 78818145 78817546 ID=MsG0780040528.01.T02;Parent=MsG0780040528.01;Name=MsG0780040528.01.T02;_AED=0.17;_eAED=0.26;_QI=0|-1|0|1|-1|1|1|0|199
Chr7 exon 78817546 78818145 78817546 ID=MsG0780040528.01.T02:exon:16142;Parent=MsG0780040528.01.T02
Chr7 CDS 78817546 78818145 78817546 ID=MsG0780040528.01.T02:cds;Parent=MsG0780040528.01.T02
Chr7 mRNA 78817629 78817706 78817629 ID=MsG0780040528.01.T03;Parent=MsG0780040528.01;Name=MsG0780040528.01.T03;_AED=0.46;_eAED=1.00;_QI=0|-1|0|1|-1|0|1|0|25
Chr7 exon 78817629 78817706 78817629 ID=MsG0780040528.01.T03:exon:16143;Parent=MsG0780040528.01.T03
Chr7 CDS 78817629 78817706 78817629 ID=MsG0780040528.01.T03:cds;Parent=MsG0780040528.01.T03
Gene Sequence

>MsG0780040528.01.T03

ATGCGAGTATCGAGGTGTTCGTCAAAGAACATGGGGGAAATGGGTTGCCGAGATAAGAGAGCCAAAGAAGAGAACTAG

>MsG0780040528.01.T01

ATGAAAACTGGAAAGTTCAAGTGGTTGCCTTCAAAGAATTTCATTTCAATGTTTCCTTCTTGTGGACTACTTAATGTAAACGCTCAACCTAGCGTTCATTTGATCCATCAGAGGCTACAAGAGTTTAAGCAGAATGCAGTCGTTGCAAGCAGCAGAGATTCAGAAAGTAGACAGCAAGAAGAGTCATACAGAAGATCCTTTGCCAAGGAAAAAGATGTTCAAACATCGGCAAATAAGATGCTTGGAGATCTTCAGGAGGACAAACCACAGATAGACCTACATGAGTTTCTTCAACAGATGGGAATACTGAAAGAAGGATCACACTCCGAGCAAACTGAGAGTTCAGGAAGTTCAACAGTGCATGAAGTTTTGCCAAGAGATGATAATGAACAATTAGGAATATTTTCAGACATGAGTGTTAATTGGGAGGCATTGATCGAGATGCATGAATTTGCGGGTATTGAGGAATCAGAAGCCACCCATCTTGAAGCATATGACCCAAATGACCACCTTAATTTCTCAACTTCCATTTGGGACTTTTAA

>MsG0780040528.01.T02

ATGATGGATAATTCCAAGAAATCCCCCTTGAAACCATGGAAGAAAGGACCAACCAGAGGCAAAGGTGGCCCTCAAAATGCTTCATGCGAGTATCGAGGTGTTCGTCAAAGAACATGGGGGAAATGGGTTGCCGAGATAAGAGAGCCAAAGAAGAGAACTAGACTCTGGCTTGGTTCTTTCGCGACAGCGGAAGAAGCTGCCATGGCTTATGATGAGGCTGCAAGGAGACTCTATGGACCAGATGCATACCTTAATCTTCCACACATGCAAACACACTCCAATTCAACTATGAAAACTGGAAAGTTCAAGTGGTTGCCTTCAAAGAATTTCATTTCAATGTTTCCTTCTTGTGGACTACTTAATGTAAACGCTCAACCTAGCGTTCATTTGATCCATCAGAGGCTACAAGAGTTTAAGCAGAATGCAGTCGTTGCAAGTCAATCATCACTTACTAGTTCATCTAATGAACCAATGGCAGCAGAGATTCAGAAAGTAGACAGCAAGAAGAGTCATACAGAAGATCCTTTGCCAAGGAAAAAGATGTTCAAACATCGGCAAATAAGATGCTTGGAGATCTTCAGGAGGACAAACCACAGATAG

Protein sequence

>MsG0780040528.01.T03

MRVSRCSSKNMGEMGCRDKRAKEEN*

>MsG0780040528.01.T01

MKTGKFKWLPSKNFISMFPSCGLLNVNAQPSVHLIHQRLQEFKQNAVVASSRDSESRQQEESYRRSFAKEKDVQTSANKMLGDLQEDKPQIDLHEFLQQMGILKEGSHSEQTESSGSSTVHEVLPRDDNEQLGIFSDMSVNWEALIEMHEFAGIEESEATHLEAYDPNDHLNFSTSIWDF*

>MsG0780040528.01.T02

MMDNSKKSPLKPWKKGPTRGKGGPQNASCEYRGVRQRTWGKWVAEIREPKKRTRLWLGSFATAEEAAMAYDEAARRLYGPDAYLNLPHMQTHSNSTMKTGKFKWLPSKNFISMFPSCGLLNVNAQPSVHLIHQRLQEFKQNAVVASQSSLTSSSNEPMAAEIQKVDSKKSHTEDPLPRKKMFKHRQIRCLEIFRRTNHR*