AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780041690.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780041690.01.T01 MTR_7g116330 97.392 767 16 2 1 765 1 765 0.0 1529
MsG0780041690.01.T01 MTR_1g079790 72.200 741 197 6 32 765 24 762 0.0 1077
MsG0780041690.01.T01 MTR_1g073840 57.483 755 307 7 16 761 8 757 0.0 889
MsG0780041690.01.T01 MTR_1g079790 73.097 565 144 5 32 590 24 586 0.0 822
MsG0780041690.01.T01 MTR_1g044210 52.987 770 337 11 1 758 1 757 0.0 801
MsG0780041690.01.T01 MTR_4g031150 39.625 747 412 15 36 760 54 783 7.51e-166 498
MsG0780041690.01.T01 MTR_7g109150 37.838 629 327 15 36 635 5 598 1.76e-110 350
MsG0780041690.01.T01 MTR_4g134880 53.425 73 33 1 690 761 1 73 3.06e-20 85.9
MsG0780041690.01.T01 MTR_8g080770 34.028 144 82 4 628 759 717 859 2.10e-17 87.4
MsG0780041690.01.T01 MTR_8g080770 22.139 402 257 10 356 706 262 658 4.28e-14 76.6
MsG0780041690.01.T01 MTR_8g080770 34.028 144 82 4 628 759 826 968 2.23e-17 87.4
MsG0780041690.01.T01 MTR_8g080770 22.139 402 257 11 356 706 371 767 4.11e-14 77.0
MsG0780041690.01.T01 MTR_3g085130 23.174 397 241 9 356 698 426 812 1.32e-16 85.1
MsG0780041690.01.T01 MTR_3g085130 36.508 126 68 4 638 754 905 1027 2.58e-15 80.9
MsG0780041690.01.T01 MTR_3g085130 23.174 397 241 9 356 698 216 602 2.66e-16 84.0
MsG0780041690.01.T01 MTR_3g085130 36.508 126 68 4 638 754 695 817 1.77e-15 81.3
MsG0780041690.01.T01 MTR_5g022470 25.225 333 208 8 366 667 498 820 1.38e-14 78.6
MsG0780041690.01.T01 MTR_5g022470 25.225 333 208 8 366 667 498 820 1.42e-14 78.6
MsG0780041690.01.T01 MTR_8g075340 24.713 348 212 11 366 678 460 792 1.98e-13 74.7
MsG0780041690.01.T01 MTR_8g075340 35.878 131 64 4 634 745 1024 1153 2.18e-13 74.7
MsG0780041690.01.T01 MTR_5g097410 20.718 362 235 7 356 670 596 952 4.74e-12 70.5
MsG0780041690.01.T01 MTR_5g097410 34.127 126 58 4 641 744 1076 1198 6.12e-12 70.1
MsG0780041690.01.T01 MTR_8g106150 33.871 124 62 3 638 744 617 737 1.87e-11 68.2
MsG0780041690.01.T01 MTR_8g106150 20.588 374 238 3 356 670 119 492 4.89e-11 66.6
MsG0780041690.01.T01 MTR_8g106150 33.871 124 62 3 638 744 860 980 2.09e-11 68.2
MsG0780041690.01.T01 MTR_8g106150 20.588 374 238 3 356 670 362 735 2.66e-11 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780041690.01.T01 AT3G04580 61.835 752 263 8 30 763 21 766 0.0 918
MsG0780041690.01.T01 AT3G04580 61.835 752 263 8 30 763 21 766 0.0 918
MsG0780041690.01.T01 AT3G23150 51.469 783 336 14 8 763 6 771 0.0 726
MsG0780041690.01.T01 AT3G23150 52.087 599 258 10 8 591 6 590 0.0 561
MsG0780041690.01.T01 AT1G04310 46.216 621 307 11 11 616 10 618 2.78e-172 510
MsG0780041690.01.T01 AT1G04310 46.216 621 307 11 11 616 10 618 2.78e-172 510
MsG0780041690.01.T01 AT1G66340 39.600 750 402 18 36 758 4 729 1.44e-164 493
MsG0780041690.01.T01 AT2G40940 38.648 577 338 10 55 622 21 590 1.56e-112 355
MsG0780041690.01.T01 AT1G27320 22.271 458 312 6 337 755 410 862 7.51e-20 95.5
MsG0780041690.01.T01 AT1G27320 29.927 137 75 3 638 754 889 1024 3.96e-13 73.9
MsG0780041690.01.T01 AT5G35750 22.715 361 226 8 357 670 567 921 1.72e-17 88.2
MsG0780041690.01.T01 AT5G35750 34.228 149 68 4 624 744 1013 1159 1.20e-13 75.5
MsG0780041690.01.T01 AT2G17820 24.779 339 220 8 367 678 488 818 1.94e-14 78.2
MsG0780041690.01.T01 AT2G01830 36.752 117 61 4 638 744 921 1034 3.09e-13 74.3
MsG0780041690.01.T01 AT2G01830 22.509 271 203 3 356 623 428 694 7.71e-13 72.8
MsG0780041690.01.T01 AT2G01830 36.752 117 61 4 638 744 921 1034 3.09e-13 74.3
MsG0780041690.01.T01 AT2G01830 22.509 271 203 3 356 623 428 694 7.71e-13 72.8
MsG0780041690.01.T01 AT2G01830 36.752 117 61 4 638 744 921 1034 3.09e-13 74.3
MsG0780041690.01.T01 AT2G01830 22.509 271 203 3 356 623 428 694 7.71e-13 72.8
MsG0780041690.01.T01 AT2G01830 36.752 117 61 4 638 744 921 1034 3.09e-13 74.3
MsG0780041690.01.T01 AT2G01830 22.509 271 203 3 356 623 428 694 7.71e-13 72.8
MsG0780041690.01.T01 AT2G01830 36.752 117 61 4 638 744 933 1046 3.10e-13 74.3
MsG0780041690.01.T01 AT2G01830 22.509 271 203 3 356 623 440 706 7.29e-13 73.2
MsG0780041690.01.T01 AT2G01830 36.752 117 61 4 638 744 944 1057 3.25e-13 74.3
MsG0780041690.01.T01 AT2G01830 22.509 271 203 3 356 623 451 717 9.62e-13 72.8

Find 177 sgRNAs with CRISPR-Local

Find 245 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTTATGTTGCAATGGAAAA+AGG 0.158153 7:-93971823 None:intergenic
TCTCTTGTGATATCTGTTTA+TGG 0.177952 7:-93971751 MsG0780041690.01.T01:CDS
CTCCAATGTTCCATTTAAAT+TGG 0.194829 7:-93971575 MsG0780041690.01.T01:CDS
TGAAGGAATACCAATTTAAA+TGG 0.204373 7:+93971565 None:intergenic
CTCTATTTCTGTAAATGATT+TGG 0.214081 7:-93971089 MsG0780041690.01.T01:CDS
TTGGAGTGTACAAAGTATTT+TGG 0.234119 7:-93971677 MsG0780041690.01.T01:CDS
AAGTATAGGCATTGAGTAAA+TGG 0.235188 7:+93971509 None:intergenic
ACCATTCAAAATCATCCTTT+TGG 0.252407 7:-93968963 MsG0780041690.01.T01:CDS
CTCAATGCCTATACTTACTA+TGG 0.275621 7:-93971502 MsG0780041690.01.T01:CDS
ACTTCAAAACCATCCATTTC+AGG 0.281316 7:+93968929 None:intergenic
GGAAGTTCCAAAGCCGAAAT+TGG 0.286448 7:-93968892 MsG0780041690.01.T01:CDS
CTCTTGTGATATCTGTTTAT+GGG 0.295715 7:-93971750 MsG0780041690.01.T01:CDS
CTACTAGCACTATTTAAAAT+TGG 0.299995 7:+93970128 None:intergenic
ATCTTATGCTATACTAGTTT+TGG 0.300114 7:-93970897 MsG0780041690.01.T01:CDS
CAAAGCCTTGAGTTCGATTT+CGG 0.313490 7:+93970869 None:intergenic
CCGCGAGATTAGGAAGTCTT+TGG 0.313919 7:-93971260 MsG0780041690.01.T01:CDS
TCAAAGGCCAATTTCGGCTT+TGG 0.315320 7:+93968885 None:intergenic
GGAAATGTTTCAACTCTAAC+TGG 0.322814 7:+93970480 None:intergenic
TGAAAACTCTTCGCCGGATT+CGG 0.327965 7:+93971115 None:intergenic
CTTCTTCTCAAGTTTCAATC+AGG 0.328501 7:-93969181 MsG0780041690.01.T01:CDS
GATAAGGATGATAGAAGTTC+TGG 0.333479 7:-93970236 MsG0780041690.01.T01:CDS
AAGTTTAATTTCCAGATAAC+TGG 0.338812 7:-93970173 MsG0780041690.01.T01:CDS
GGGAACTAGTACCAGTTATC+TGG 0.355067 7:+93970162 None:intergenic
CGAAATCGAACTCAAGGCTT+TGG 0.361339 7:-93970868 MsG0780041690.01.T01:CDS
TGTGCCAAACCCAGAGAGTT+TGG 0.362144 7:+93969214 None:intergenic
AGGAGGCTAGTTGGCATGTT+AGG 0.362594 7:-93971291 MsG0780041690.01.T01:CDS
CAATAATCAAAGGCCAATTT+CGG 0.365522 7:+93968879 None:intergenic
CTGGATATCACCAAACTCTC+TGG 0.365884 7:-93969224 MsG0780041690.01.T01:CDS
GGATCTTCAAATGCCTGAAA+TGG 0.366381 7:-93968942 MsG0780041690.01.T01:CDS
TGGAATTGGGGCAAGAGGTT+GGG 0.375142 7:-93971330 MsG0780041690.01.T01:CDS
CCCTCATCATGGAATGTAGA+TGG 0.380010 7:+93970459 None:intergenic
TTGGAATTGGGGCAAGAGGT+TGG 0.382688 7:-93971331 MsG0780041690.01.T01:CDS
TCATCACCTATTACCATATC+AGG 0.382707 7:+93970362 None:intergenic
TAAGAAGCTGCTTGAGAAGC+TGG 0.383208 7:-93969050 MsG0780041690.01.T01:CDS
GCAGAGATCCTTGCCTGATA+TGG 0.386198 7:-93970375 MsG0780041690.01.T01:CDS
GCTGCGAGTAGTGGTGAATC+TGG 0.386274 7:-93971004 MsG0780041690.01.T01:CDS
GCAAAACCGGGCGTTGCAAC+AGG 0.388211 7:-93970735 MsG0780041690.01.T01:CDS
GAAGCAGAATGTGTTGGAAT+TGG 0.390130 7:-93971344 MsG0780041690.01.T01:CDS
AGAAACTTAAAGAGCAAAAC+CGG 0.390137 7:-93970748 MsG0780041690.01.T01:CDS
GAGACCTTTGCATTCAATCC+TGG 0.400066 7:-93970642 MsG0780041690.01.T01:CDS
AAGCAGAATGTGTTGGAATT+GGG 0.402075 7:-93971343 MsG0780041690.01.T01:CDS
AAGTGTTTGTGTGTGTATAA+AGG 0.402755 7:-93970419 MsG0780041690.01.T01:CDS
TTAAAATTGGTCCATCTGAA+TGG 0.402769 7:+93970141 None:intergenic
TCCTTGCCTGATATGGTAAT+AGG 0.403180 7:-93970368 MsG0780041690.01.T01:CDS
ATTATGCAACTCCAAGGCTT+TGG 0.407308 7:+93971198 None:intergenic
GGATGTTGACCCGCGAGATT+AGG 0.409855 7:-93971270 MsG0780041690.01.T01:CDS
CCTCCTTAGGTTCATTGTTG+TGG 0.420175 7:+93970099 None:intergenic
GCAGCTCCGAGTGCAGAATC+AGG 0.421232 7:+93971022 None:intergenic
GCATGCAATGATGGCCAGCC+GGG 0.421964 7:-93970705 MsG0780041690.01.T01:CDS
CAAGTAACCGCTGTTTCATC+GGG 0.427661 7:-93969022 MsG0780041690.01.T01:CDS
TGTTGAGCTTTCCAAAGCCT+TGG 0.429033 7:-93971209 MsG0780041690.01.T01:CDS
TTATTGAACTTATATGATAG+AGG 0.430014 7:-93970299 MsG0780041690.01.T01:CDS
AGCATGCAATGATGGCCAGC+CGG 0.432572 7:-93970706 MsG0780041690.01.T01:CDS
AAGTGCAGAAGAACGCATAA+AGG 0.432930 7:-93968846 MsG0780041690.01.T01:CDS
TGCCTACAGGTGGGAATGAA+TGG 0.434232 7:-93968818 MsG0780041690.01.T01:CDS
AGATGATGGAAGGTAATATC+TGG 0.435995 7:-93969243 MsG0780041690.01.T01:CDS
AAATGAGCTCCTTGCCCGGC+TGG 0.436215 7:+93970691 None:intergenic
TTGTGTGTGTATAAAGGCTT+TGG 0.437175 7:-93970413 MsG0780041690.01.T01:CDS
GGCACAAAAGCATGCAATGA+TGG 0.437900 7:-93970714 MsG0780041690.01.T01:CDS
TCAAGTAACCGCTGTTTCAT+CGG 0.439160 7:-93969023 MsG0780041690.01.T01:CDS
ATATCTGTTTATGGGATTGA+TGG 0.441688 7:-93971742 MsG0780041690.01.T01:CDS
ATCACCAAACTCTCTGGGTT+TGG 0.443024 7:-93969218 MsG0780041690.01.T01:CDS
CTGAAGCTTAGGCCCTCCTT+AGG 0.443209 7:+93970086 None:intergenic
TAAAATTGGTCCATCTGAAT+GGG 0.443946 7:+93970142 None:intergenic
AGTTGCATAATTGTGCGGTT+TGG 0.452705 7:-93971186 MsG0780041690.01.T01:CDS
TCATGAGTTGAAGCCGAATC+CGG 0.456399 7:-93971128 MsG0780041690.01.T01:CDS
CCACCATGAGATGGAGATAG+TGG 0.458301 7:-93970843 MsG0780041690.01.T01:CDS
AGACCTTTGCATTCAATCCT+GGG 0.459059 7:-93970641 MsG0780041690.01.T01:CDS
TTGAAGTTGCAAGGAAGATT+CGG 0.459346 7:-93968913 MsG0780041690.01.T01:CDS
CCGATGATGATAATGTAAAC+AGG 0.466113 7:-93969081 MsG0780041690.01.T01:CDS
GGATGCCTGATGAGGATAGA+AGG 0.466923 7:-93971165 MsG0780041690.01.T01:CDS
GTAAAGTAGCTCAAGGGGTA+TGG 0.472963 7:+93971609 None:intergenic
CACTATCTCCATCTCATGGT+GGG 0.473097 7:+93970844 None:intergenic
TTTCAAAAGAAGAGGAATCA+AGG 0.474095 7:+93971390 None:intergenic
TTGAGGCCTGATTCTGCACT+CGG 0.474787 7:-93971028 MsG0780041690.01.T01:CDS
CTGCGAGTAGTGGTGAATCT+GGG 0.475786 7:-93971003 MsG0780041690.01.T01:CDS
CTGGAAACTTCCTTTGTCGT+TGG 0.475889 7:+93970499 None:intergenic
GTTAGAGATAAGAAAGAGCA+AGG 0.479184 7:-93971062 MsG0780041690.01.T01:CDS
TGAAAGTGATACCGCAGATA+AGG 0.485783 7:-93970252 MsG0780041690.01.T01:CDS
CAGGCATTTGAAGATCCAAA+AGG 0.486141 7:+93968948 None:intergenic
CAATGATGGCCAGCCGGGCA+AGG 0.487153 7:-93970700 MsG0780041690.01.T01:CDS
AACTCTCTGGGTTTGGCACA+AGG 0.491639 7:-93969211 MsG0780041690.01.T01:CDS
ATCACCCTTCTATCCTCATC+AGG 0.491816 7:+93971160 None:intergenic
TTTGTGCCTGTTGCAACGCC+CGG 0.496643 7:+93970729 None:intergenic
AAATTTGAAACATGAAGTAT+CGG 0.504455 7:+93970950 None:intergenic
TTCTTCCGAAATCGAACTCA+AGG 0.505225 7:-93970874 MsG0780041690.01.T01:CDS
GCGTTTGATAAATGATGTAA+TGG 0.505741 7:-93970531 MsG0780041690.01.T01:CDS
TCTCAAATGAGCTCCTTGCC+CGG 0.508034 7:+93970687 None:intergenic
CTATGAAAGCAACAAATTGA+AGG 0.510314 7:+93971548 None:intergenic
CGTTAAGACCTCTAAACTGT+TGG 0.510727 7:+93969113 None:intergenic
GTTGCTTTCATAGTTCTATG+TGG 0.512396 7:-93971538 MsG0780041690.01.T01:CDS
AGTATAGGCATTGAGTAAAT+GGG 0.513040 7:+93971510 None:intergenic
ATGAGGGCCATAGTAAGTAT+AGG 0.515615 7:+93971495 None:intergenic
TACCAATTTAAATGGAACAT+TGG 0.516471 7:+93971573 None:intergenic
CCTGTTTACATTATCATCAT+CGG 0.516759 7:+93969081 None:intergenic
GCAAGAAGCTTCCCTCATCA+TGG 0.517031 7:+93970448 None:intergenic
AGAAACAATTGAAAGGAATG+AGG 0.527304 7:+93971478 None:intergenic
TAACAAAGTAAAGTAGCTCA+AGG 0.529518 7:+93971602 None:intergenic
TCCATCTACATTCCATGATG+AGG 0.531079 7:-93970460 MsG0780041690.01.T01:CDS
GCTATCTCATGAAGGAGGAT+AGG 0.531373 7:+93968782 None:intergenic
CATAAAGGAGAGATGCCTAC+AGG 0.532003 7:-93968831 MsG0780041690.01.T01:CDS
TATTGAACTTATATGATAGA+GGG 0.534997 7:-93970298 MsG0780041690.01.T01:CDS
CTTCAAATGCCTGAAATGGA+TGG 0.537656 7:-93968938 MsG0780041690.01.T01:CDS
TTTCTTGAAGCAGAATGTGT+TGG 0.539138 7:-93971350 MsG0780041690.01.T01:CDS
CATTTGCAAAACACTGGTGC+AGG 0.542360 7:-93970063 MsG0780041690.01.T01:intron
CCATCTACATTCCATGATGA+GGG 0.547828 7:-93970459 MsG0780041690.01.T01:CDS
AGAAACAGAAGGAGGCTAGT+TGG 0.551296 7:-93971300 MsG0780041690.01.T01:CDS
GAGCTATGAAAACTCTTCGC+CGG 0.551463 7:+93971109 None:intergenic
AAAAGAAGAGGAATCAAGGT+GGG 0.554060 7:+93971394 None:intergenic
AACAAAGTAAAGTAGCTCAA+GGG 0.554101 7:+93971603 None:intergenic
TTGCAGTGGCACATGAAACA+AGG 0.555378 7:+93971425 None:intergenic
TTAGAGATAAGAAAGAGCAA+GGG 0.559027 7:-93971061 MsG0780041690.01.T01:CDS
GCAAAGGTCTCCTCATTCCA+TGG 0.564414 7:+93970654 None:intergenic
AAGTGATGAGCCATGGAATG+AGG 0.565260 7:-93970664 MsG0780041690.01.T01:CDS
CCACAACAATGAACCTAAGG+AGG 0.566649 7:-93970099 MsG0780041690.01.T01:CDS
ACGAATGGCTGCTACAGCAC+CGG 0.566933 7:+93970976 None:intergenic
AGTTGCTGACCAGGTTGCTG+TGG 0.568847 7:-93970816 MsG0780041690.01.T01:CDS
CCACTATCTCCATCTCATGG+TGG 0.569247 7:+93970843 None:intergenic
TTTGCTTTCAATGTTTCAAG+AGG 0.570011 7:-93970618 MsG0780041690.01.T01:CDS
AGTGGAGGTAGTTGCTGACC+AGG 0.570687 7:-93970825 MsG0780041690.01.T01:CDS
TGGATATCACCAAACTCTCT+GGG 0.571039 7:-93969223 MsG0780041690.01.T01:CDS
GAAACAATTGAAAGGAATGA+GGG 0.573404 7:+93971479 None:intergenic
AAGAAGCTGCTTGAGAAGCT+GGG 0.574319 7:-93969049 MsG0780041690.01.T01:CDS
AGAACAGTCCTGCTACGTGC+AGG 0.575168 7:-93968749 MsG0780041690.01.T01:CDS
GCACCACAACAATGAACCTA+AGG 0.576436 7:-93970102 MsG0780041690.01.T01:CDS
AGTGGTGAATCTGGGGACTC+CGG 0.577575 7:-93970995 MsG0780041690.01.T01:CDS
ACCTATTACCATATCAGGCA+AGG 0.579803 7:+93970367 None:intergenic
GAGAGATAGAAACAATTGAA+AGG 0.580396 7:+93971471 None:intergenic
GCACTCGGAGCTGCGAGTAG+TGG 0.580746 7:-93971013 MsG0780041690.01.T01:CDS
GAAATTTCAGCCAACGACAA+AGG 0.583389 7:-93970509 MsG0780041690.01.T01:CDS
TTTGAGAAAGTGATGAGCCA+TGG 0.585455 7:-93970671 MsG0780041690.01.T01:CDS
GCTTTGGACCCACCATGAGA+TGG 0.587831 7:-93970852 MsG0780041690.01.T01:CDS
AGCAGAATGTGTTGGAATTG+GGG 0.589243 7:-93971342 MsG0780041690.01.T01:CDS
TGTGTTGGAATTGGGGCAAG+AGG 0.591001 7:-93971335 MsG0780041690.01.T01:CDS
TAGAGATAAGAAAGAGCAAG+GGG 0.591331 7:-93971060 MsG0780041690.01.T01:CDS
CTTCAGCATTTGCAAAACAC+TGG 0.591426 7:-93970069 MsG0780041690.01.T01:CDS
CAAAGACTTCCTAATCTCGC+GGG 0.591973 7:+93971261 None:intergenic
ACTCTCTGGGTTTGGCACAA+GGG 0.593543 7:-93969210 MsG0780041690.01.T01:CDS
ATGAAGTATCGGCATACGAA+TGG 0.595708 7:+93970961 None:intergenic
ACAAAGTAAAGTAGCTCAAG+GGG 0.596064 7:+93971604 None:intergenic
TGGGATTATGAAGAAACAGA+AGG 0.598480 7:-93971311 MsG0780041690.01.T01:CDS
TTTAATGTACAGATGATGGA+AGG 0.599238 7:-93969253 MsG0780041690.01.T01:intron
CCAAAGACTTCCTAATCTCG+CGG 0.601574 7:+93971260 None:intergenic
CTTGGAGTTGCATAATTGTG+CGG 0.602360 7:-93971191 MsG0780041690.01.T01:CDS
TTTATACACACACAAACACT+TGG 0.603367 7:+93970421 None:intergenic
TGGTAATAGGTGATGAGTCA+AGG 0.604019 7:-93970355 MsG0780041690.01.T01:CDS
GCTGTAAGAGCAATAATCAA+AGG 0.605453 7:+93968869 None:intergenic
GGTACTAGTTCCCATTCAGA+TGG 0.605734 7:-93970152 MsG0780041690.01.T01:CDS
GAGACAAGGCCACAGCAACC+TGG 0.608666 7:+93970807 None:intergenic
GTTCGTTAGCTATCTCATGA+AGG 0.613143 7:+93968774 None:intergenic
TGCAGTGGCACATGAAACAA+GGG 0.615264 7:+93971426 None:intergenic
TGCGAGTAGTGGTGAATCTG+GGG 0.617209 7:-93971002 MsG0780041690.01.T01:CDS
TAAGATGTCTCAACAAACTC+CGG 0.617656 7:+93970914 None:intergenic
CCTCCACTATCTCCATCTCA+TGG 0.620492 7:+93970840 None:intergenic
CGCACAATTATGCAACTCCA+AGG 0.622141 7:+93971192 None:intergenic
AAAGGAGAGATGCCTACAGG+TGG 0.625741 7:-93968828 MsG0780041690.01.T01:CDS
AAAGAAGAGGAATCAAGGTG+GGG 0.631154 7:+93971395 None:intergenic
TGCGGTTTGGATGCCTGATG+AGG 0.636065 7:-93971173 MsG0780041690.01.T01:CDS
AAGAACAGATGCATGAGACA+AGG 0.644755 7:+93970793 None:intergenic
AAACCCAGGATTGAATGCAA+AGG 0.645170 7:+93970638 None:intergenic
TTTGGAAAGCTCAACAAGTG+TGG 0.647875 7:+93971216 None:intergenic
CGTTAGCTATCTCATGAAGG+AGG 0.649779 7:+93968777 None:intergenic
GATGCCTGATGAGGATAGAA+GGG 0.652796 7:-93971164 MsG0780041690.01.T01:CDS
GAAACATTGAAAGCAAACCC+AGG 0.654290 7:+93970624 None:intergenic
ATCAAAACCCGATGAAACAG+CGG 0.664158 7:+93969015 None:intergenic
AAGGAGAGATGCCTACAGGT+GGG 0.666460 7:-93968827 MsG0780041690.01.T01:CDS
CACATGAAACAAGGGCAGTG+AGG 0.669285 7:+93971434 None:intergenic
CACAACAATGAACCTAAGGA+GGG 0.669995 7:-93970098 MsG0780041690.01.T01:CDS
AGAGATAAGAAAGAGCAAGG+GGG 0.671908 7:-93971059 MsG0780041690.01.T01:CDS
CCATGAGATGGAGATAGTGG+AGG 0.673370 7:-93970840 MsG0780041690.01.T01:CDS
TTTCAATCAGGATCATCACA+TGG 0.673727 7:-93969169 MsG0780041690.01.T01:CDS
ACTTCTATCATCCTTATCTG+CGG 0.674734 7:+93970241 None:intergenic
GAAACTTAAAGAGCAAAACC+GGG 0.674790 7:-93970747 MsG0780041690.01.T01:CDS
ATCCATTCATTCCCACCTGT+AGG 0.679015 7:+93968816 None:intergenic
CAAAAGAAGAGGAATCAAGG+TGG 0.682155 7:+93971393 None:intergenic
GGTGGGGAAAGTAATTGCAG+TGG 0.686035 7:+93971411 None:intergenic
GATTATGAAGAAACAGAAGG+AGG 0.703737 7:-93971308 MsG0780041690.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTCTCTTTTTCAAATTTATA+TGG - Chr7:93970513-93970532 MsG0780041690.01.T01:CDS 15.0%
!! AATATTCAAAAGGTAAAAAG+TGG + Chr7:93971208-93971227 None:intergenic 20.0%
!! AATATTTAATGTACAGATGA+TGG - Chr7:93971290-93971309 MsG0780041690.01.T01:CDS 20.0%
!! ATCAACAAAAACTTAAACAA+AGG + Chr7:93970545-93970564 None:intergenic 20.0%
!! TATTGAACTTATATGATAGA+GGG - Chr7:93970249-93970268 MsG0780041690.01.T01:CDS 20.0%
!! TCTGTACATTAAATATTGTA+TGG + Chr7:93971287-93971306 None:intergenic 20.0%
!! TTATTGAACTTATATGATAG+AGG - Chr7:93970248-93970267 MsG0780041690.01.T01:CDS 20.0%
!!! AAATTTGAAACATGAAGTAT+CGG + Chr7:93969600-93969619 None:intergenic 20.0%
!!! ATGTTTCAAATTTTAAAGGA+GGG - Chr7:93969607-93969626 MsG0780041690.01.T01:intron 20.0%
!!! CAATTAATTTTGCATATGAT+CGG - Chr7:93970221-93970240 MsG0780041690.01.T01:CDS 20.0%
!!! CTATCAATAAAATTAGTTTG+TGG - Chr7:93970772-93970791 MsG0780041690.01.T01:CDS 20.0%
!!! CTTCATGTTTCAAATTTTAA+AGG - Chr7:93969603-93969622 MsG0780041690.01.T01:intron 20.0%
! AACCACACTATAAATAATAC+TGG + Chr7:93970899-93970918 None:intergenic 25.0%
! AACCAGTATTATTTATAGTG+TGG - Chr7:93970894-93970913 MsG0780041690.01.T01:CDS 25.0%
! AGTATCTATTCATCACAAAT+CGG - Chr7:93970937-93970956 MsG0780041690.01.T01:CDS 25.0%
! ATGAATAGATACTAAGAATG+AGG + Chr7:93970930-93970949 None:intergenic 25.0%
! CTAAATGAAGAATGAAATAG+CGG - Chr7:93970979-93970998 MsG0780041690.01.T01:CDS 25.0%
! TACCAATTTAAATGGAACAT+TGG + Chr7:93968977-93968996 None:intergenic 25.0%
! TGAAGGAATACCAATTTAAA+TGG + Chr7:93968985-93969004 None:intergenic 25.0%
! TTATTTATAGTGTGGTTTCT+TGG - Chr7:93970902-93970921 MsG0780041690.01.T01:CDS 25.0%
! TTCACTTATTCAGATAATTG+AGG + Chr7:93970706-93970725 None:intergenic 25.0%
!! AAGTTTAATTTCCAGATAAC+TGG - Chr7:93970374-93970393 MsG0780041690.01.T01:CDS 25.0%
!! CAATTTTAAATAGTGCTAGT+AGG - Chr7:93970420-93970439 MsG0780041690.01.T01:CDS 25.0%
!! CTACTAGCACTATTTAAAAT+TGG + Chr7:93970422-93970441 None:intergenic 25.0%
!!! ATCTTATGCTATACTAGTTT+TGG - Chr7:93969650-93969669 MsG0780041690.01.T01:intron 25.0%
!!! CATGTTTCAAATTTTAAAGG+AGG - Chr7:93969606-93969625 MsG0780041690.01.T01:intron 25.0%
!!! CTCTATTTCTGTAAATGATT+TGG - Chr7:93969458-93969477 MsG0780041690.01.T01:intron 25.0%
!!! TCAATAAAATTAGTTTGTGG+TGG - Chr7:93970775-93970794 MsG0780041690.01.T01:CDS 25.0%
AACAAAGTAAAGTAGCTCAA+GGG + Chr7:93968947-93968966 None:intergenic 30.0%
AAGTGTTTGTGTGTGTATAA+AGG - Chr7:93970128-93970147 MsG0780041690.01.T01:CDS 30.0%
AGAAACAATTGAAAGGAATG+AGG + Chr7:93969072-93969091 None:intergenic 30.0%
AGAAACTTAAAGAGCAAAAC+CGG - Chr7:93969799-93969818 MsG0780041690.01.T01:intron 30.0%
AGGTAAAAAGTGGAAAAAAG+TGG + Chr7:93971198-93971217 None:intergenic 30.0%
AGTTGCATCTACACTAAATA+GGG + Chr7:93970850-93970869 None:intergenic 30.0%
ATATCTGTTTATGGGATTGA+TGG - Chr7:93968805-93968824 MsG0780041690.01.T01:CDS 30.0%
CAATAATCAAAGGCCAATTT+CGG + Chr7:93971671-93971690 None:intergenic 30.0%
CCTGTTTACATTATCATCAT+CGG + Chr7:93971469-93971488 None:intergenic 30.0%
CTATGAAAGCAACAAATTGA+AGG + Chr7:93969002-93969021 None:intergenic 30.0%
CTCCAATGTTCCATTTAAAT+TGG - Chr7:93968972-93968991 MsG0780041690.01.T01:CDS 30.0%
CTCTTGTGATATCTGTTTAT+GGG - Chr7:93968797-93968816 MsG0780041690.01.T01:CDS 30.0%
GAAACAATTGAAAGGAATGA+GGG + Chr7:93969071-93969090 None:intergenic 30.0%
GAGAGATAGAAACAATTGAA+AGG + Chr7:93969079-93969098 None:intergenic 30.0%
GCGTTTGATAAATGATGTAA+TGG - Chr7:93970016-93970035 MsG0780041690.01.T01:intron 30.0%
GTGAATCAAGCATATGTTAT+AGG + Chr7:93971237-93971256 None:intergenic 30.0%
TAAAATTGGTCCATCTGAAT+GGG + Chr7:93970408-93970427 None:intergenic 30.0%
TAACAAAGTAAAGTAGCTCA+AGG + Chr7:93968948-93968967 None:intergenic 30.0%
TAGGACACAGAATATTCAAA+AGG + Chr7:93971218-93971237 None:intergenic 30.0%
TAGTTGCATCTACACTAAAT+AGG + Chr7:93970851-93970870 None:intergenic 30.0%
TCTCTTGTGATATCTGTTTA+TGG - Chr7:93968796-93968815 MsG0780041690.01.T01:CDS 30.0%
TTAAAATTGGTCCATCTGAA+TGG + Chr7:93970409-93970428 None:intergenic 30.0%
TTAGAGATAAGAAAGAGCAA+GGG - Chr7:93969486-93969505 MsG0780041690.01.T01:intron 30.0%
TTCGTATCTGTTTATGATGT+TGG - Chr7:93970734-93970753 MsG0780041690.01.T01:CDS 30.0%
TTTATACACACACAAACACT+TGG + Chr7:93970129-93970148 None:intergenic 30.0%
TTTCAAAAGAAGAGGAATCA+AGG + Chr7:93969160-93969179 None:intergenic 30.0%
TTTGCTTTCAATGTTTCAAG+AGG - Chr7:93969929-93969948 MsG0780041690.01.T01:intron 30.0%
! AATCGTTGTGTCAGATTTTT+AGG - Chr7:93970801-93970820 MsG0780041690.01.T01:CDS 30.0%
! ACCATTCAAAATCATCCTTT+TGG - Chr7:93971584-93971603 MsG0780041690.01.T01:CDS 30.0%
! ACCTTGATTTTCAAAAGAAG+AGG + Chr7:93969168-93969187 None:intergenic 30.0%
! AGGGGGCTTTTTAAATTTAT+TGG + Chr7:93970831-93970850 None:intergenic 30.0%
! CGCTATTTCATTCTTCATTT+AGG + Chr7:93970981-93971000 None:intergenic 30.0%
! GATGATTTTGAATGGTATAC+TGG + Chr7:93971580-93971599 None:intergenic 30.0%
! TCCAAAAGGATGATTTTGAA+TGG + Chr7:93971588-93971607 None:intergenic 30.0%
! TCTTGGTTTGACAAAATTTC+CGG - Chr7:93970677-93970696 MsG0780041690.01.T01:CDS 30.0%
! TTTTCAAACCAACAGTTTAG+AGG - Chr7:93971426-93971445 MsG0780041690.01.T01:CDS 30.0%
!! AAGTATAGGCATTGAGTAAA+TGG + Chr7:93969041-93969060 None:intergenic 30.0%
!! AGTATAGGCATTGAGTAAAT+GGG + Chr7:93969040-93969059 None:intergenic 30.0%
!! ATGATGATGATGATGGAATT+TGG - Chr7:93968851-93968870 MsG0780041690.01.T01:CDS 30.0%
!! TCCTCTTCTTTTGAAAATCA+AGG - Chr7:93969164-93969183 MsG0780041690.01.T01:CDS 30.0%
!! TCTTTTGAAAATCAAGGTGA+GGG - Chr7:93969170-93969189 MsG0780041690.01.T01:CDS 30.0%
!! TTCTTTTGAAAATCAAGGTG+AGG - Chr7:93969169-93969188 MsG0780041690.01.T01:CDS 30.0%
!! TTGGAGTGTACAAAGTATTT+TGG - Chr7:93968870-93968889 MsG0780041690.01.T01:CDS 30.0%
!! TTTAATGTACAGATGATGGA+AGG - Chr7:93971294-93971313 MsG0780041690.01.T01:CDS 30.0%
AAAAGAAGAGGAATCAAGGT+GGG + Chr7:93969156-93969175 None:intergenic 35.0%
AAGCAGAATGTGTTGGAATT+GGG - Chr7:93969204-93969223 MsG0780041690.01.T01:CDS 35.0%
ACAAAGTAAAGTAGCTCAAG+GGG + Chr7:93968946-93968965 None:intergenic 35.0%
ACTTCAAAACCATCCATTTC+AGG + Chr7:93971621-93971640 None:intergenic 35.0%
ACTTCTATCATCCTTATCTG+CGG + Chr7:93970309-93970328 None:intergenic 35.0%
ATTCAGATAATTGAGGCTAC+CGG + Chr7:93970699-93970718 None:intergenic 35.0%
CATCATAAACAGATACGAAC+AGG + Chr7:93970733-93970752 None:intergenic 35.0%
CTCAATGCCTATACTTACTA+TGG - Chr7:93969045-93969064 MsG0780041690.01.T01:CDS 35.0%
CTTCTTCTCAAGTTTCAATC+AGG - Chr7:93971366-93971385 MsG0780041690.01.T01:CDS 35.0%
GAAACTTAAAGAGCAAAACC+GGG - Chr7:93969800-93969819 MsG0780041690.01.T01:intron 35.0%
GATAAGGATGATAGAAGTTC+TGG - Chr7:93970311-93970330 MsG0780041690.01.T01:CDS 35.0%
GATTATGAAGAAACAGAAGG+AGG - Chr7:93969239-93969258 MsG0780041690.01.T01:CDS 35.0%
GCTACAAAACAATCACACAA+TGG + Chr7:93971259-93971278 None:intergenic 35.0%
GCTGTAAGAGCAATAATCAA+AGG + Chr7:93971681-93971700 None:intergenic 35.0%
GGAAATGTTTCAACTCTAAC+TGG + Chr7:93970070-93970089 None:intergenic 35.0%
GGAGTAGAAACTTAATACAG+AGG + Chr7:93971177-93971196 None:intergenic 35.0%
GTTAGAGATAAGAAAGAGCA+AGG - Chr7:93969485-93969504 MsG0780041690.01.T01:intron 35.0%
GTTGCATCTACACTAAATAG+GGG + Chr7:93970849-93970868 None:intergenic 35.0%
TAAGATGTCTCAACAAACTC+CGG + Chr7:93969636-93969655 None:intergenic 35.0%
TAGAGATAAGAAAGAGCAAG+GGG - Chr7:93969487-93969506 MsG0780041690.01.T01:intron 35.0%
TCATCACCTATTACCATATC+AGG + Chr7:93970188-93970207 None:intergenic 35.0%
TGGGATTATGAAGAAACAGA+AGG - Chr7:93969236-93969255 MsG0780041690.01.T01:CDS 35.0%
TTGAAGTTGCAAGGAAGATT+CGG - Chr7:93971634-93971653 MsG0780041690.01.T01:CDS 35.0%
TTGCATCTACACTAAATAGG+GGG + Chr7:93970848-93970867 None:intergenic 35.0%
TTGTGTGTGTATAAAGGCTT+TGG - Chr7:93970134-93970153 MsG0780041690.01.T01:CDS 35.0%
TTTCAATCAGGATCATCACA+TGG - Chr7:93971378-93971397 MsG0780041690.01.T01:CDS 35.0%
TTTCTTGAAGCAGAATGTGT+TGG - Chr7:93969197-93969216 MsG0780041690.01.T01:CDS 35.0%
! AACTGTGATGATGATGATGA+TGG - Chr7:93968844-93968863 MsG0780041690.01.T01:CDS 35.0%
! ATGAAGAATGAAATAGCGGA+AGG - Chr7:93970983-93971002 MsG0780041690.01.T01:CDS 35.0%
! CCGATGATGATAATGTAAAC+AGG - Chr7:93971466-93971485 MsG0780041690.01.T01:CDS 35.0%
! GATTTTGAATGGTATACTGG+AGG + Chr7:93971577-93971596 None:intergenic 35.0%
! GTTGCTTTCATAGTTCTATG+TGG - Chr7:93969009-93969028 MsG0780041690.01.T01:CDS 35.0%
! TGAAGAATGAAATAGCGGAA+GGG - Chr7:93970984-93971003 MsG0780041690.01.T01:CDS 35.0%
! TTTTGCAAATGCTGAAGCTT+AGG + Chr7:93970475-93970494 None:intergenic 35.0%
!! AAATTTTAAAGGAGGGACAC+CGG - Chr7:93969614-93969633 MsG0780041690.01.T01:intron 35.0%
!! AGATGATGGAAGGTAATATC+TGG - Chr7:93971304-93971323 MsG0780041690.01.T01:CDS 35.0%
!!! TTCATCGGGTTTTGATTGTT+TGG - Chr7:93971539-93971558 MsG0780041690.01.T01:CDS 35.0%
AAACCCAGGATTGAATGCAA+AGG + Chr7:93969912-93969931 None:intergenic 40.0%
AAAGAAGAGGAATCAAGGTG+GGG + Chr7:93969155-93969174 None:intergenic 40.0%
AAGAACAGATGCATGAGACA+AGG + Chr7:93969757-93969776 None:intergenic 40.0%
AAGTGCAGAAGAACGCATAA+AGG - Chr7:93971701-93971720 MsG0780041690.01.T01:CDS 40.0%
ACCTATTACCATATCAGGCA+AGG + Chr7:93970183-93970202 None:intergenic 40.0%
AGACCTTTGCATTCAATCCT+GGG - Chr7:93969906-93969925 MsG0780041690.01.T01:intron 40.0%
AGAGATAAGAAAGAGCAAGG+GGG - Chr7:93969488-93969507 MsG0780041690.01.T01:intron 40.0%
AGATGCAACTAATTGCATGC+AGG - Chr7:93970860-93970879 MsG0780041690.01.T01:CDS 40.0%
AGCAGAATGTGTTGGAATTG+GGG - Chr7:93969205-93969224 MsG0780041690.01.T01:CDS 40.0%
AGCAGCTCATACTTTGTCAA+AGG + Chr7:93970583-93970602 None:intergenic 40.0%
AGCTCATACTTTGTCAAAGG+TGG + Chr7:93970580-93970599 None:intergenic 40.0%
AGTTGCATAATTGTGCGGTT+TGG - Chr7:93969361-93969380 MsG0780041690.01.T01:intron 40.0%
ATCAAAACCCGATGAAACAG+CGG + Chr7:93971535-93971554 None:intergenic 40.0%
ATGAGGGCCATAGTAAGTAT+AGG + Chr7:93969055-93969074 None:intergenic 40.0%
ATTATGCAACTCCAAGGCTT+TGG + Chr7:93969352-93969371 None:intergenic 40.0%
CAAAAGAAGAGGAATCAAGG+TGG + Chr7:93969157-93969176 None:intergenic 40.0%
CAAAGCCTTGAGTTCGATTT+CGG + Chr7:93969681-93969700 None:intergenic 40.0%
CACAACAATGAACCTAAGGA+GGG - Chr7:93970449-93970468 MsG0780041690.01.T01:CDS 40.0%
CAGGCATTTGAAGATCCAAA+AGG + Chr7:93971602-93971621 None:intergenic 40.0%
CCATCTACATTCCATGATGA+GGG - Chr7:93970088-93970107 MsG0780041690.01.T01:CDS 40.0%
CGTTAAGACCTCTAAACTGT+TGG + Chr7:93971437-93971456 None:intergenic 40.0%
CTCATACTTTGTCAAAGGTG+GGG + Chr7:93970578-93970597 None:intergenic 40.0%
CTTCAAATGCCTGAAATGGA+TGG - Chr7:93971609-93971628 MsG0780041690.01.T01:CDS 40.0%
CTTCAGCATTTGCAAAACAC+TGG - Chr7:93970478-93970497 MsG0780041690.01.T01:CDS 40.0%
CTTGGAGTTGCATAATTGTG+CGG - Chr7:93969356-93969375 MsG0780041690.01.T01:intron 40.0%
GAAACATTGAAAGCAAACCC+AGG + Chr7:93969926-93969945 None:intergenic 40.0%
GAAATTTCAGCCAACGACAA+AGG - Chr7:93970038-93970057 MsG0780041690.01.T01:intron 40.0%
GAAGCAGAATGTGTTGGAAT+TGG - Chr7:93969203-93969222 MsG0780041690.01.T01:CDS 40.0%
GATGCAACTAATTGCATGCA+GGG - Chr7:93970861-93970880 MsG0780041690.01.T01:CDS 40.0%
GCTCATACTTTGTCAAAGGT+GGG + Chr7:93970579-93970598 None:intergenic 40.0%
GGATCTTCAAATGCCTGAAA+TGG - Chr7:93971605-93971624 MsG0780041690.01.T01:CDS 40.0%
GTTCGTTAGCTATCTCATGA+AGG + Chr7:93971776-93971795 None:intergenic 40.0%
TCCATCTACATTCCATGATG+AGG - Chr7:93970087-93970106 MsG0780041690.01.T01:CDS 40.0%
TCCTTGCCTGATATGGTAAT+AGG - Chr7:93970179-93970198 MsG0780041690.01.T01:CDS 40.0%
TGAAAGTGATACCGCAGATA+AGG - Chr7:93970295-93970314 MsG0780041690.01.T01:CDS 40.0%
TGGATATCACCAAACTCTCT+GGG - Chr7:93971324-93971343 MsG0780041690.01.T01:CDS 40.0%
TGGTAATAGGTGATGAGTCA+AGG - Chr7:93970192-93970211 MsG0780041690.01.T01:CDS 40.0%
TTCTTCCGAAATCGAACTCA+AGG - Chr7:93969673-93969692 MsG0780041690.01.T01:intron 40.0%
TTTGAGAAAGTGATGAGCCA+TGG - Chr7:93969876-93969895 MsG0780041690.01.T01:intron 40.0%
TTTGGAAAGCTCAACAAGTG+TGG + Chr7:93969334-93969353 None:intergenic 40.0%
! GAACTACATTTTACGCACAG+AGG - Chr7:93970649-93970668 MsG0780041690.01.T01:CDS 40.0%
! TCAAGTAACCGCTGTTTCAT+CGG - Chr7:93971524-93971543 MsG0780041690.01.T01:CDS 40.0%
!! ATGAAGTATCGGCATACGAA+TGG + Chr7:93969589-93969608 None:intergenic 40.0%
!!! TGGATGGTTTTGAAGTTGCA+AGG - Chr7:93971625-93971644 MsG0780041690.01.T01:CDS 40.0%
AAAAAGACTCAGCCTGTGCT+TGG - Chr7:93971072-93971091 MsG0780041690.01.T01:CDS 45.0%
AAGAAGCTGCTTGAGAAGCT+GGG - Chr7:93971498-93971517 MsG0780041690.01.T01:CDS 45.0%
AAGTGATGAGCCATGGAATG+AGG - Chr7:93969883-93969902 MsG0780041690.01.T01:intron 45.0%
AGAAACAGAAGGAGGCTAGT+TGG - Chr7:93969247-93969266 MsG0780041690.01.T01:intron 45.0%
AGCTGCACGTTTAGTGAGAA+GGG - Chr7:93971115-93971134 MsG0780041690.01.T01:CDS 45.0%
ATCACCAAACTCTCTGGGTT+TGG - Chr7:93971329-93971348 MsG0780041690.01.T01:CDS 45.0%
ATCACCCTTCTATCCTCATC+AGG + Chr7:93969390-93969409 None:intergenic 45.0%
ATCCATTCATTCCCACCTGT+AGG + Chr7:93971734-93971753 None:intergenic 45.0%
CAAAGACTTCCTAATCTCGC+GGG + Chr7:93969289-93969308 None:intergenic 45.0%
CACTATCTCCATCTCATGGT+GGG + Chr7:93969706-93969725 None:intergenic 45.0%
CATAAAGGAGAGATGCCTAC+AGG - Chr7:93971716-93971735 MsG0780041690.01.T01:CDS 45.0%
CATTTGCAAAACACTGGTGC+AGG - Chr7:93970484-93970503 MsG0780041690.01.T01:CDS 45.0%
CCAAAGACTTCCTAATCTCG+CGG + Chr7:93969290-93969309 None:intergenic 45.0%
CCACAACAATGAACCTAAGG+AGG - Chr7:93970448-93970467 MsG0780041690.01.T01:CDS 45.0%
CCCTCATCATGGAATGTAGA+TGG + Chr7:93970091-93970110 None:intergenic 45.0%
CCTCCTTAGGTTCATTGTTG+TGG + Chr7:93970451-93970470 None:intergenic 45.0%
CGAAATCGAACTCAAGGCTT+TGG - Chr7:93969679-93969698 MsG0780041690.01.T01:intron 45.0%
CGCACAATTATGCAACTCCA+AGG + Chr7:93969358-93969377 None:intergenic 45.0%
CGTTAGCTATCTCATGAAGG+AGG + Chr7:93971773-93971792 None:intergenic 45.0%
CTGGAAACTTCCTTTGTCGT+TGG + Chr7:93970051-93970070 None:intergenic 45.0%
CTGGATATCACCAAACTCTC+TGG - Chr7:93971323-93971342 MsG0780041690.01.T01:CDS 45.0%
GAGACCTTTGCATTCAATCC+TGG - Chr7:93969905-93969924 MsG0780041690.01.T01:intron 45.0%
GAGCTATGAAAACTCTTCGC+CGG + Chr7:93969441-93969460 None:intergenic 45.0%
GATGCCTGATGAGGATAGAA+GGG - Chr7:93969383-93969402 MsG0780041690.01.T01:intron 45.0%
GCACCACAACAATGAACCTA+AGG - Chr7:93970445-93970464 MsG0780041690.01.T01:CDS 45.0%
GCTATCTCATGAAGGAGGAT+AGG + Chr7:93971768-93971787 None:intergenic 45.0%
GGAAGTTCCAAAGCCGAAAT+TGG - Chr7:93971655-93971674 MsG0780041690.01.T01:CDS 45.0%
GGGAACTAGTACCAGTTATC+TGG + Chr7:93970388-93970407 None:intergenic 45.0%
GGTACTAGTTCCCATTCAGA+TGG - Chr7:93970395-93970414 MsG0780041690.01.T01:CDS 45.0%
GTAAAGTAGCTCAAGGGGTA+TGG + Chr7:93968941-93968960 None:intergenic 45.0%
TAAGAAGCTGCTTGAGAAGC+TGG - Chr7:93971497-93971516 MsG0780041690.01.T01:CDS 45.0%
TCAAAGGCCAATTTCGGCTT+TGG + Chr7:93971665-93971684 None:intergenic 45.0%
TGAAAACTCTTCGCCGGATT+CGG + Chr7:93969435-93969454 None:intergenic 45.0%
TGCAGTGGCACATGAAACAA+GGG + Chr7:93969124-93969143 None:intergenic 45.0%
TGTTGAGCTTTCCAAAGCCT+TGG - Chr7:93969338-93969357 MsG0780041690.01.T01:intron 45.0%
TTGCAGTGGCACATGAAACA+AGG + Chr7:93969125-93969144 None:intergenic 45.0%
! CAAGTAACCGCTGTTTCATC+GGG - Chr7:93971525-93971544 MsG0780041690.01.T01:CDS 45.0%
! GGCACAAAAGCATGCAATGA+TGG - Chr7:93969833-93969852 MsG0780041690.01.T01:intron 45.0%
! TCATGAGTTGAAGCCGAATC+CGG - Chr7:93969419-93969438 MsG0780041690.01.T01:intron 45.0%
AAAGGAGAGATGCCTACAGG+TGG - Chr7:93971719-93971738 MsG0780041690.01.T01:CDS 50.0%
AACTCTCTGGGTTTGGCACA+AGG - Chr7:93971336-93971355 MsG0780041690.01.T01:CDS 50.0%
AAGGAGAGATGCCTACAGGT+GGG - Chr7:93971720-93971739 MsG0780041690.01.T01:CDS 50.0%
ACTCTCTGGGTTTGGCACAA+GGG - Chr7:93971337-93971356 MsG0780041690.01.T01:CDS 50.0%
ACTTTGTCAAAGGTGGGGAG+AGG + Chr7:93970573-93970592 None:intergenic 50.0%
CACATGAAACAAGGGCAGTG+AGG + Chr7:93969116-93969135 None:intergenic 50.0%
CAGCTGCACGTTTAGTGAGA+AGG - Chr7:93971114-93971133 MsG0780041690.01.T01:CDS 50.0%
CCACCATGAGATGGAGATAG+TGG - Chr7:93969704-93969723 MsG0780041690.01.T01:intron 50.0%
CCACTATCTCCATCTCATGG+TGG + Chr7:93969707-93969726 None:intergenic 50.0%
CCGCGAGATTAGGAAGTCTT+TGG - Chr7:93969287-93969306 MsG0780041690.01.T01:intron 50.0%
CCTCCACTATCTCCATCTCA+TGG + Chr7:93969710-93969729 None:intergenic 50.0%
CTGCGAGTAGTGGTGAATCT+GGG - Chr7:93969544-93969563 MsG0780041690.01.T01:intron 50.0%
GCAAAGGTCTCCTCATTCCA+TGG + Chr7:93969896-93969915 None:intergenic 50.0%
GCAAGAAGCTTCCCTCATCA+TGG + Chr7:93970102-93970121 None:intergenic 50.0%
GCAGAGATCCTTGCCTGATA+TGG - Chr7:93970172-93970191 MsG0780041690.01.T01:CDS 50.0%
GGATGCCTGATGAGGATAGA+AGG - Chr7:93969382-93969401 MsG0780041690.01.T01:intron 50.0%
GGTGGGGAAAGTAATTGCAG+TGG + Chr7:93969139-93969158 None:intergenic 50.0%
TACGCACAGAGGATGACTCT+TGG - Chr7:93970660-93970679 MsG0780041690.01.T01:CDS 50.0%
TCTCAAATGAGCTCCTTGCC+CGG + Chr7:93969863-93969882 None:intergenic 50.0%
TGCCTACAGGTGGGAATGAA+TGG - Chr7:93971729-93971748 MsG0780041690.01.T01:CDS 50.0%
TGCGAGTAGTGGTGAATCTG+GGG - Chr7:93969545-93969564 MsG0780041690.01.T01:intron 50.0%
TGGAATTGGGGCAAGAGGTT+GGG - Chr7:93969217-93969236 MsG0780041690.01.T01:CDS 50.0%
TGTGCCAAACCCAGAGAGTT+TGG + Chr7:93971336-93971355 None:intergenic 50.0%
TGTGTTGGAATTGGGGCAAG+AGG - Chr7:93969212-93969231 MsG0780041690.01.T01:CDS 50.0%
TTGAGGCCTGATTCTGCACT+CGG - Chr7:93969519-93969538 MsG0780041690.01.T01:intron 50.0%
TTGGAATTGGGGCAAGAGGT+TGG - Chr7:93969216-93969235 MsG0780041690.01.T01:CDS 50.0%
! ACGTTTAGTGAGAAGGGCAC+TGG - Chr7:93971121-93971140 MsG0780041690.01.T01:CDS 50.0%
! ACTTTTCACCTGCACGTAGC+AGG + Chr7:93971809-93971828 None:intergenic 50.0%
! AGGAGGCTAGTTGGCATGTT+AGG - Chr7:93969256-93969275 MsG0780041690.01.T01:intron 50.0%
! CCATGAGATGGAGATAGTGG+AGG - Chr7:93969707-93969726 MsG0780041690.01.T01:intron 50.0%
!! CGTTTAGTGAGAAGGGCACT+GGG - Chr7:93971122-93971141 MsG0780041690.01.T01:CDS 50.0%
ACGAATGGCTGCTACAGCAC+CGG + Chr7:93969574-93969593 None:intergenic 55.0%
ACTACCGCTAGACCAAGCAC+AGG + Chr7:93971087-93971106 None:intergenic 55.0%
AGAACAGTCCTGCTACGTGC+AGG - Chr7:93971798-93971817 MsG0780041690.01.T01:CDS 55.0%
AGCATGCAATGATGGCCAGC+CGG - Chr7:93969841-93969860 MsG0780041690.01.T01:intron 55.0%
AGTGGAGGTAGTTGCTGACC+AGG - Chr7:93969722-93969741 MsG0780041690.01.T01:intron 55.0%
AGTGGTGAATCTGGGGACTC+CGG - Chr7:93969552-93969571 MsG0780041690.01.T01:intron 55.0%
AGTTGCTGACCAGGTTGCTG+TGG - Chr7:93969731-93969750 MsG0780041690.01.T01:intron 55.0%
CTGAAGCTTAGGCCCTCCTT+AGG + Chr7:93970464-93970483 None:intergenic 55.0%
GCTGCGAGTAGTGGTGAATC+TGG - Chr7:93969543-93969562 MsG0780041690.01.T01:intron 55.0%
GGATGTTGACCCGCGAGATT+AGG - Chr7:93969277-93969296 MsG0780041690.01.T01:intron 55.0%
TCAGCCTGTGCTTGGTCTAG+CGG - Chr7:93971080-93971099 MsG0780041690.01.T01:CDS 55.0%
TTTGTGCCTGTTGCAACGCC+CGG + Chr7:93969821-93969840 None:intergenic 55.0%
! GCTTTGGACCCACCATGAGA+TGG - Chr7:93969695-93969714 MsG0780041690.01.T01:intron 55.0%
! TGCGGTTTGGATGCCTGATG+AGG - Chr7:93969374-93969393 MsG0780041690.01.T01:intron 55.0%
!!! GCAAGGGGGTGTCGATTTTG+AGG - Chr7:93969502-93969521 MsG0780041690.01.T01:intron 55.0%
AAATGAGCTCCTTGCCCGGC+TGG + Chr7:93969859-93969878 None:intergenic 60.0%
GAGACAAGGCCACAGCAACC+TGG + Chr7:93969743-93969762 None:intergenic 60.0%
GCAGCTCCGAGTGCAGAATC+AGG + Chr7:93969528-93969547 None:intergenic 60.0%
GCATGCAATGATGGCCAGCC+GGG - Chr7:93969842-93969861 MsG0780041690.01.T01:intron 60.0%
! GCAAAACCGGGCGTTGCAAC+AGG - Chr7:93969812-93969831 MsG0780041690.01.T01:intron 60.0%
CAATGATGGCCAGCCGGGCA+AGG - Chr7:93969847-93969866 MsG0780041690.01.T01:intron 65.0%
GCACTCGGAGCTGCGAGTAG+TGG - Chr7:93969534-93969553 MsG0780041690.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr7 gene 93968736 93971833 93968736 ID=MsG0780041690.01;Name=MsG0780041690.01
Chr7 mRNA 93968736 93971833 93968736 ID=MsG0780041690.01.T01;Parent=MsG0780041690.01;Name=MsG0780041690.01.T01;_AED=0.45;_eAED=0.45;_QI=0|0|0|1|1|1|2|0|765
Chr7 exon 93970064 93971833 93970064 ID=MsG0780041690.01.T01:exon:20622;Parent=MsG0780041690.01.T01
Chr7 exon 93968736 93969263 93968736 ID=MsG0780041690.01.T01:exon:20621;Parent=MsG0780041690.01.T01
Chr7 CDS 93970064 93971833 93970064 ID=MsG0780041690.01.T01:cds;Parent=MsG0780041690.01.T01
Chr7 CDS 93968736 93969263 93968736 ID=MsG0780041690.01.T01:cds;Parent=MsG0780041690.01.T01
Gene Sequence

>MsG0780041690.01.T01

ATGGAAAAAGGGTTTTCTTCTTCTTCTTCTTTGTTGTTATTGCTGTTGTTGATGATTAGTTCTCTTGTGATATCTGTTTATGGGATTGATGGTGAATATGTACATTGCAACTGTGATGATGATGATGATGGAATTTGGAGTGTACAAAGTATTTTGGTTTGTCAAAAAGTCAGTGACTTTTTCATTGCTATTGCATATTTTTCCATACCCCTTGAGCTACTTTACTTTGTTAGCTACTCCAATGTTCCATTTAAATTGGTATTCCTTCAATTTGTTGCTTTCATAGTTCTATGTGGTTTGACCCATTTACTCAATGCCTATACTTACTATGGCCCTCATTCCTTTCAATTGTTTCTATCTCTCACTGTTGCTAAATTCCTCACTGCCCTTGTTTCATGTGCCACTGCAATTACTTTCCCCACCTTGATTCCTCTTCTTTTGAAAATCAAGGTGAGGGAGTTTTTCTTGAAGCAGAATGTGTTGGAATTGGGGCAAGAGGTTGGGATTATGAAGAAACAGAAGGAGGCTAGTTGGCATGTTAGGATGTTGACCCGCGAGATTAGGAAGTCTTTGGATAAGCATACAATTTTGTATACCACACTTGTTGAGCTTTCCAAAGCCTTGGAGTTGCATAATTGTGCGGTTTGGATGCCTGATGAGGATAGAAGGGTGATGCATTTGACTCATGAGTTGAAGCCGAATCCGGCGAAGAGTTTTCATAGCTCTATTTCTGTAAATGATTTGGATGTGTTAGAGATAAGAAAGAGCAAGGGGGTGTCGATTTTGAGGCCTGATTCTGCACTCGGAGCTGCGAGTAGTGGTGAATCTGGGGACTCCGGTGCTGTAGCAGCCATTCGTATGCCGATACTTCATGTTTCAAATTTTAAAGGAGGGACACCGGAGTTTGTTGAGACATCTTATGCTATACTAGTTTTGGTTCTTCCGAAATCGAACTCAAGGCTTTGGACCCACCATGAGATGGAGATAGTGGAGGTAGTTGCTGACCAGGTTGCTGTGGCCTTGTCTCATGCATCTGTTCTTGAAGAGTCTCAGCTAATGAGACAGAAACTTAAAGAGCAAAACCGGGCGTTGCAACAGGCACAAAAGCATGCAATGATGGCCAGCCGGGCAAGGAGCTCATTTGAGAAAGTGATGAGCCATGGAATGAGGAGACCTTTGCATTCAATCCTGGGTTTGCTTTCAATGTTTCAAGAGGATAATATAAGATCTGAACAAAAGATTGTTGTTGACACAATATTGAAAGTTAGCAATTCGCTCTCGCGTTTGATAAATGATGTAATGGAAATTTCAGCCAACGACAAAGGAAGTTTCCAGTTAGAGTTGAAACATTTCCATCTACATTCCATGATGAGGGAAGCTTCTTGCATTGCCAAGTGTTTGTGTGTGTATAAAGGCTTTGGTCTTGAAATTGACGTGCAGAGATCCTTGCCTGATATGGTAATAGGTGATGAGTCAAGGTCTTTTCAATTAATTTTGCATATGATCGGCTATTTATTGAACTTATATGATAGAGGGACTCTCATTTTTCGAGTTTCTTTTGAAAGTGATACCGCAGATAAGGATGATAGAAGTTCTGGAATATTAAGATCAAGCATGCAAAATGATAATGTGTATATAAAGTTTAATTTCCAGATAACTGGTACTAGTTCCCATTCAGATGGACCAATTTTAAATAGTGCTAGTAGGATGCACCACAACAATGAACCTAAGGAGGGCCTAAGCTTCAGCATTTGCAAAACACTGGTGCAGATGATGGAAGGTAATATCTGGATATCACCAAACTCTCTGGGTTTGGCACAAGGGATGACACTTCTTCTCAAGTTTCAATCAGGATCATCACATGGAAGATTCGTTCTTGCTAACAAAGATTTTTCAAACCAACAGTTTAGAGGTCTTAACGTTATTTTAGCCGATGATGATAATGTAAACAGGACTGTAACTAAGAAGCTGCTTGAGAAGCTGGGTTGTCAAGTAACCGCTGTTTCATCGGGTTTTGATTGTTTGGCTGCTATAACTGCCTCCAGTATACCATTCAAAATCATCCTTTTGGATCTTCAAATGCCTGAAATGGATGGTTTTGAAGTTGCAAGGAAGATTCGGAAGTTCCAAAGCCGAAATTGGCCTTTGATTATTGCTCTTACAGCAAGTGCAGAAGAACGCATAAAGGAGAGATGCCTACAGGTGGGAATGAATGGATTGATTCGAAAACCTATCCTCCTTCATGAGATAGCTAACGAACTTAGAACAGTCCTGCTACGTGCAGGTGAAAAGTTCTAA
Protein sequence

>MsG0780041690.01.T01

MEKGFSSSSSLLLLLLLMISSLVISVYGIDGEYVHCNCDDDDDGIWSVQSILVCQKVSDFFIAIAYFSIPLELLYFVSYSNVPFKLVFLQFVAFIVLCGLTHLLNAYTYYGPHSFQLFLSLTVAKFLTALVSCATAITFPTLIPLLLKIKVREFFLKQNVLELGQEVGIMKKQKEASWHVRMLTREIRKSLDKHTILYTTLVELSKALELHNCAVWMPDEDRRVMHLTHELKPNPAKSFHSSISVNDLDVLEIRKSKGVSILRPDSALGAASSGESGDSGAVAAIRMPILHVSNFKGGTPEFVETSYAILVLVLPKSNSRLWTHHEMEIVEVVADQVAVALSHASVLEESQLMRQKLKEQNRALQQAQKHAMMASRARSSFEKVMSHGMRRPLHSILGLLSMFQEDNIRSEQKIVVDTILKVSNSLSRLINDVMEISANDKGSFQLELKHFHLHSMMREASCIAKCLCVYKGFGLEIDVQRSLPDMVIGDESRSFQLILHMIGYLLNLYDRGTLIFRVSFESDTADKDDRSSGILRSSMQNDNVYIKFNFQITGTSSHSDGPILNSASRMHHNNEPKEGLSFSICKTLVQMMEGNIWISPNSLGLAQGMTLLLKFQSGSSHGRFVLANKDFSNQQFRGLNVILADDDNVNRTVTKKLLEKLGCQVTAVSSGFDCLAAITASSIPFKIILLDLQMPEMDGFEVARKIRKFQSRNWPLIIALTASAEERIKERCLQVGMNGLIRKPILLHEIANELRTVLLRAGEKF*