Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880041888.01.T01 | XP_003626706.2 | 94.37 | 373 | 17 | 4 | 1 | 373 | 6 | 374 | 0 | 647 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880041888.01.T01 | Q9M0B8 | 50.42 | 357 | 167 | 3 | 8 | 362 | 1 | 349 | 2.22E-125 | 368 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880041888.01.T01 | G7LBL0 | 94.370 | 373 | 17 | 4 | 1 | 373 | 6 | 374 | 0.0 | 647 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0880041888.01 | MsG0880047545.01 | PPI |
| MsG0180001094.01 | MsG0880041888.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880041888.01.T01 | MTR_8g006120 | 94.370 | 373 | 17 | 4 | 1 | 373 | 6 | 374 | 0.0 | 647 |
| MsG0880041888.01.T01 | MTR_2g065550 | 73.190 | 373 | 91 | 7 | 1 | 372 | 6 | 370 | 0.0 | 527 |
| MsG0880041888.01.T01 | MTR_8g006010 | 67.027 | 370 | 117 | 5 | 1 | 370 | 6 | 370 | 1.57e-172 | 486 |
| MsG0880041888.01.T01 | MTR_8g006090 | 72.113 | 355 | 96 | 2 | 1 | 355 | 7 | 358 | 1.90e-168 | 474 |
| MsG0880041888.01.T01 | MTR_8g006050 | 66.220 | 373 | 86 | 8 | 1 | 371 | 7 | 341 | 2.86e-165 | 466 |
| MsG0880041888.01.T01 | MTR_8g006090 | 74.342 | 304 | 76 | 1 | 1 | 304 | 7 | 308 | 4.95e-149 | 423 |
| MsG0880041888.01.T01 | MTR_8g006090 | 72.598 | 281 | 74 | 2 | 75 | 355 | 1 | 278 | 9.25e-126 | 363 |
| MsG0880041888.01.T01 | MTR_4g129650 | 50.578 | 346 | 163 | 5 | 1 | 344 | 4 | 343 | 1.54e-118 | 348 |
| MsG0880041888.01.T01 | MTR_8g006090 | 74.699 | 249 | 61 | 1 | 1 | 249 | 7 | 253 | 1.84e-115 | 338 |
| MsG0880041888.01.T01 | MTR_4g129650 | 50.413 | 242 | 114 | 4 | 103 | 344 | 1 | 236 | 1.83e-79 | 244 |
| MsG0880041888.01.T01 | MTR_6g081840 | 38.793 | 348 | 206 | 3 | 14 | 359 | 19 | 361 | 2.26e-76 | 240 |
| MsG0880041888.01.T01 | MTR_3g112480 | 37.306 | 386 | 201 | 7 | 9 | 373 | 24 | 389 | 6.22e-75 | 238 |
| MsG0880041888.01.T01 | MTR_8g006090 | 76.571 | 175 | 39 | 1 | 75 | 249 | 1 | 173 | 2.31e-73 | 227 |
| MsG0880041888.01.T01 | MTR_2g016710 | 36.705 | 346 | 207 | 3 | 2 | 347 | 5 | 338 | 3.73e-71 | 227 |
| MsG0880041888.01.T01 | MTR_8g041390 | 35.326 | 368 | 225 | 8 | 1 | 362 | 12 | 372 | 1.04e-69 | 224 |
| MsG0880041888.01.T01 | MTR_3g012420 | 38.095 | 336 | 198 | 6 | 6 | 338 | 18 | 346 | 1.11e-69 | 224 |
| MsG0880041888.01.T01 | MTR_1g023180 | 35.112 | 356 | 209 | 3 | 8 | 347 | 24 | 373 | 1.50e-69 | 224 |
| MsG0880041888.01.T01 | MTR_1g074120 | 37.952 | 332 | 200 | 3 | 4 | 334 | 15 | 341 | 1.08e-67 | 218 |
| MsG0880041888.01.T01 | MTR_1g073990 | 39.831 | 354 | 201 | 6 | 4 | 356 | 15 | 357 | 1.47e-67 | 217 |
| MsG0880041888.01.T01 | MTR_2g007960 | 33.777 | 376 | 219 | 6 | 6 | 369 | 13 | 370 | 3.93e-67 | 217 |
| MsG0880041888.01.T01 | MTR_1g074070 | 36.446 | 332 | 205 | 3 | 4 | 334 | 15 | 341 | 4.95e-66 | 213 |
| MsG0880041888.01.T01 | MTR_1g030580 | 36.103 | 349 | 212 | 4 | 6 | 349 | 17 | 359 | 1.20e-65 | 213 |
| MsG0880041888.01.T01 | MTR_1g038560 | 34.503 | 342 | 215 | 3 | 6 | 347 | 4 | 336 | 1.27e-65 | 212 |
| MsG0880041888.01.T01 | MTR_1g074160 | 37.015 | 335 | 205 | 4 | 1 | 334 | 9 | 338 | 2.07e-65 | 211 |
| MsG0880041888.01.T01 | MTR_6g036450 | 34.421 | 337 | 213 | 4 | 1 | 334 | 12 | 343 | 3.67e-65 | 211 |
| MsG0880041888.01.T01 | MTR_3g072500 | 32.877 | 365 | 231 | 5 | 6 | 359 | 21 | 382 | 3.75e-64 | 209 |
| MsG0880041888.01.T01 | MTR_2g102340 | 37.931 | 319 | 193 | 3 | 10 | 327 | 17 | 331 | 6.41e-64 | 208 |
| MsG0880041888.01.T01 | MTR_1g114210 | 34.441 | 331 | 213 | 2 | 6 | 336 | 12 | 338 | 6.87e-64 | 207 |
| MsG0880041888.01.T01 | MTR_3g112480 | 37.304 | 319 | 166 | 5 | 73 | 373 | 32 | 334 | 7.16e-64 | 207 |
| MsG0880041888.01.T01 | MTR_3g095420 | 33.537 | 328 | 215 | 2 | 6 | 330 | 8 | 335 | 2.34e-63 | 206 |
| MsG0880041888.01.T01 | MTR_1g070175 | 34.036 | 332 | 212 | 3 | 2 | 333 | 13 | 337 | 3.61e-63 | 206 |
| MsG0880041888.01.T01 | MTR_1g051120 | 34.971 | 346 | 217 | 5 | 4 | 347 | 15 | 354 | 2.26e-62 | 204 |
| MsG0880041888.01.T01 | MTR_1g068630 | 33.945 | 327 | 210 | 4 | 1 | 326 | 11 | 332 | 2.91e-62 | 204 |
| MsG0880041888.01.T01 | MTR_0096s0100 | 35.890 | 326 | 204 | 3 | 2 | 326 | 15 | 336 | 6.68e-61 | 200 |
| MsG0880041888.01.T01 | MTR_7g100050 | 35.404 | 322 | 204 | 3 | 6 | 326 | 14 | 332 | 7.24e-61 | 201 |
| MsG0880041888.01.T01 | MTR_3g072530 | 35.143 | 350 | 209 | 6 | 6 | 347 | 15 | 354 | 1.65e-60 | 199 |
| MsG0880041888.01.T01 | MTR_1g074020 | 37.126 | 334 | 204 | 3 | 6 | 338 | 14 | 342 | 1.88e-60 | 199 |
| MsG0880041888.01.T01 | MTR_2g007990 | 30.749 | 387 | 230 | 7 | 6 | 369 | 16 | 387 | 4.53e-60 | 199 |
| MsG0880041888.01.T01 | MTR_2g016710 | 36.304 | 303 | 188 | 2 | 2 | 304 | 5 | 302 | 4.87e-60 | 197 |
| MsG0880041888.01.T01 | MTR_2g027030 | 34.211 | 342 | 214 | 4 | 1 | 339 | 8 | 341 | 2.55e-59 | 196 |
| MsG0880041888.01.T01 | MTR_7g111830 | 32.132 | 333 | 210 | 4 | 5 | 327 | 7 | 333 | 3.54e-59 | 196 |
| MsG0880041888.01.T01 | MTR_5g021160 | 32.659 | 346 | 222 | 3 | 8 | 345 | 10 | 352 | 7.45e-59 | 195 |
| MsG0880041888.01.T01 | MTR_1g030600 | 35.671 | 328 | 209 | 2 | 13 | 339 | 26 | 352 | 3.63e-58 | 194 |
| MsG0880041888.01.T01 | MTR_4g106720 | 34.441 | 331 | 197 | 4 | 5 | 326 | 11 | 330 | 4.15e-58 | 192 |
| MsG0880041888.01.T01 | MTR_2g007970 | 33.425 | 362 | 230 | 5 | 6 | 365 | 13 | 365 | 7.56e-58 | 193 |
| MsG0880041888.01.T01 | MTR_3g095450 | 33.923 | 339 | 199 | 5 | 6 | 330 | 6 | 333 | 9.36e-58 | 192 |
| MsG0880041888.01.T01 | MTR_3g095460 | 32.931 | 331 | 218 | 3 | 6 | 334 | 6 | 334 | 3.20e-57 | 190 |
| MsG0880041888.01.T01 | MTR_8g092650 | 34.356 | 326 | 207 | 3 | 6 | 326 | 6 | 329 | 2.82e-56 | 188 |
| MsG0880041888.01.T01 | MTR_3g090550 | 33.429 | 347 | 219 | 6 | 5 | 347 | 6 | 344 | 1.15e-55 | 186 |
| MsG0880041888.01.T01 | MTR_3g072560 | 35.404 | 322 | 201 | 3 | 6 | 326 | 19 | 334 | 1.32e-55 | 187 |
| MsG0880041888.01.T01 | MTR_4g094342 | 33.229 | 319 | 209 | 2 | 6 | 321 | 14 | 331 | 1.80e-55 | 186 |
| MsG0880041888.01.T01 | MTR_4g094340 | 31.714 | 350 | 223 | 5 | 6 | 349 | 10 | 349 | 1.73e-54 | 183 |
| MsG0880041888.01.T01 | MTR_4g094352 | 33.780 | 373 | 232 | 5 | 6 | 368 | 13 | 380 | 2.19e-54 | 184 |
| MsG0880041888.01.T01 | MTR_4g094340 | 31.714 | 350 | 223 | 5 | 6 | 349 | 28 | 367 | 2.26e-54 | 183 |
| MsG0880041888.01.T01 | MTR_2g007260 | 32.861 | 353 | 213 | 5 | 6 | 347 | 15 | 354 | 2.35e-52 | 179 |
| MsG0880041888.01.T01 | MTR_3g112480 | 35.971 | 278 | 144 | 5 | 114 | 373 | 1 | 262 | 9.50e-52 | 173 |
| MsG0880041888.01.T01 | MTR_3g072500 | 33.929 | 280 | 172 | 4 | 91 | 359 | 2 | 279 | 3.44e-51 | 173 |
| MsG0880041888.01.T01 | MTR_0103s0090 | 34.356 | 326 | 210 | 2 | 5 | 330 | 11 | 332 | 4.68e-51 | 174 |
| MsG0880041888.01.T01 | MTR_4g094362 | 33.841 | 328 | 212 | 3 | 1 | 326 | 10 | 334 | 9.05e-51 | 174 |
| MsG0880041888.01.T01 | MTR_3g072520 | 33.851 | 322 | 211 | 2 | 6 | 326 | 10 | 330 | 5.13e-50 | 172 |
| MsG0880041888.01.T01 | MTR_3g095440 | 32.277 | 347 | 222 | 4 | 6 | 347 | 6 | 344 | 6.22e-50 | 171 |
| MsG0880041888.01.T01 | MTR_5g034990 | 33.129 | 326 | 211 | 3 | 5 | 330 | 14 | 332 | 8.68e-50 | 171 |
| MsG0880041888.01.T01 | MTR_4g094360 | 33.628 | 339 | 215 | 4 | 1 | 336 | 10 | 341 | 1.93e-49 | 171 |
| MsG0880041888.01.T01 | MTR_4g094340 | 34.815 | 270 | 162 | 4 | 83 | 346 | 19 | 280 | 1.33e-48 | 166 |
| MsG0880041888.01.T01 | MTR_3g019050 | 31.056 | 322 | 218 | 3 | 7 | 327 | 20 | 338 | 5.40e-47 | 164 |
| MsG0880041888.01.T01 | MTR_1g030400 | 28.438 | 320 | 220 | 4 | 14 | 327 | 16 | 332 | 5.80e-47 | 164 |
| MsG0880041888.01.T01 | MTR_5g025370 | 30.055 | 366 | 232 | 6 | 8 | 351 | 13 | 376 | 2.16e-46 | 163 |
| MsG0880041888.01.T01 | MTR_5g068790 | 30.650 | 323 | 220 | 3 | 7 | 327 | 20 | 340 | 3.58e-46 | 162 |
| MsG0880041888.01.T01 | MTR_5g025290 | 31.642 | 335 | 208 | 7 | 8 | 326 | 14 | 343 | 2.24e-45 | 160 |
| MsG0880041888.01.T01 | MTR_5g069040 | 29.630 | 324 | 224 | 3 | 7 | 327 | 20 | 342 | 2.32e-45 | 160 |
| MsG0880041888.01.T01 | MTR_5g025290 | 31.642 | 335 | 208 | 7 | 8 | 326 | 42 | 371 | 4.83e-45 | 160 |
| MsG0880041888.01.T01 | MTR_5g025330 | 29.024 | 379 | 240 | 6 | 8 | 373 | 12 | 374 | 7.34e-44 | 160 |
| MsG0880041888.01.T01 | MTR_5g021160 | 30.483 | 269 | 181 | 1 | 83 | 345 | 1 | 269 | 2.05e-43 | 152 |
| MsG0880041888.01.T01 | MTR_5g089390 | 29.630 | 324 | 210 | 4 | 9 | 327 | 18 | 328 | 3.13e-43 | 154 |
| MsG0880041888.01.T01 | MTR_8g092650 | 34.802 | 227 | 142 | 2 | 105 | 326 | 26 | 251 | 5.11e-43 | 151 |
| MsG0880041888.01.T01 | MTR_6g007760 | 33.987 | 306 | 191 | 4 | 5 | 306 | 11 | 309 | 9.84e-43 | 151 |
| MsG0880041888.01.T01 | MTR_5g025400 | 28.609 | 381 | 241 | 8 | 8 | 373 | 14 | 378 | 1.04e-42 | 153 |
| MsG0880041888.01.T01 | MTR_0103s0090 | 35.537 | 242 | 153 | 1 | 89 | 330 | 3 | 241 | 1.42e-42 | 150 |
| MsG0880041888.01.T01 | MTR_5g025340 | 28.919 | 370 | 237 | 6 | 8 | 355 | 13 | 378 | 2.29e-42 | 152 |
| MsG0880041888.01.T01 | MTR_4g094360 | 32.781 | 302 | 197 | 3 | 6 | 304 | 15 | 313 | 9.94e-41 | 146 |
| MsG0880041888.01.T01 | MTR_5g034910 | 30.514 | 331 | 225 | 3 | 10 | 339 | 12 | 338 | 1.62e-40 | 146 |
| MsG0880041888.01.T01 | MTR_5g034980 | 29.866 | 298 | 204 | 3 | 30 | 326 | 32 | 325 | 3.79e-40 | 145 |
| MsG0880041888.01.T01 | MTR_8g072350 | 28.916 | 332 | 219 | 5 | 9 | 326 | 13 | 341 | 4.44e-40 | 146 |
| MsG0880041888.01.T01 | MTR_4g094360 | 34.375 | 256 | 163 | 2 | 82 | 336 | 43 | 294 | 6.25e-40 | 145 |
| MsG0880041888.01.T01 | MTR_3g072500 | 33.054 | 239 | 155 | 3 | 6 | 242 | 21 | 256 | 1.79e-39 | 142 |
| MsG0880041888.01.T01 | MTR_5g034930 | 29.874 | 318 | 218 | 3 | 10 | 326 | 11 | 324 | 4.50e-39 | 142 |
| MsG0880041888.01.T01 | MTR_6g007743 | 30.769 | 312 | 205 | 4 | 29 | 337 | 36 | 339 | 9.51e-39 | 142 |
| MsG0880041888.01.T01 | MTR_1g074160 | 34.800 | 250 | 157 | 4 | 6 | 254 | 14 | 258 | 1.51e-37 | 136 |
| MsG0880041888.01.T01 | MTR_1g014510 | 30.909 | 330 | 212 | 5 | 5 | 326 | 11 | 332 | 2.14e-37 | 140 |
| MsG0880041888.01.T01 | MTR_5g021160 | 31.727 | 249 | 165 | 2 | 8 | 254 | 10 | 255 | 2.34e-37 | 136 |
| MsG0880041888.01.T01 | MTR_6g007747 | 35.197 | 304 | 185 | 4 | 29 | 330 | 36 | 329 | 1.06e-36 | 136 |
| MsG0880041888.01.T01 | MTR_2g102340 | 36.752 | 234 | 143 | 3 | 10 | 242 | 43 | 272 | 2.79e-36 | 134 |
| MsG0880041888.01.T01 | MTR_5g012650 | 29.341 | 334 | 221 | 6 | 7 | 333 | 10 | 335 | 2.57e-35 | 132 |
| MsG0880041888.01.T01 | MTR_6g007750 | 31.707 | 328 | 217 | 4 | 5 | 330 | 12 | 334 | 2.63e-34 | 130 |
| MsG0880041888.01.T01 | MTR_6g007740 | 29.674 | 337 | 226 | 4 | 4 | 337 | 11 | 339 | 6.63e-33 | 128 |
| MsG0880041888.01.T01 | MTR_3g095440 | 30.830 | 253 | 168 | 3 | 6 | 253 | 6 | 256 | 6.14e-32 | 121 |
| MsG0880041888.01.T01 | MTR_6g007757 | 32.440 | 336 | 204 | 7 | 29 | 357 | 36 | 355 | 6.02e-31 | 121 |
| MsG0880041888.01.T01 | MTR_4g100840 | 25.356 | 351 | 242 | 6 | 1 | 340 | 10 | 351 | 1.07e-30 | 120 |
| MsG0880041888.01.T01 | MTR_6g007753 | 31.488 | 289 | 190 | 3 | 44 | 330 | 333 | 615 | 2.38e-30 | 122 |
| MsG0880041888.01.T01 | MTR_6g007753 | 30.040 | 253 | 163 | 4 | 118 | 364 | 84 | 328 | 8.80e-25 | 106 |
| MsG0880041888.01.T01 | MTR_5g034970 | 28.213 | 319 | 211 | 4 | 9 | 326 | 11 | 312 | 2.49e-30 | 119 |
| MsG0880041888.01.T01 | MTR_4g094340 | 31.557 | 244 | 154 | 4 | 6 | 243 | 10 | 246 | 1.53e-29 | 115 |
| MsG0880041888.01.T01 | MTR_4g094340 | 31.557 | 244 | 154 | 4 | 6 | 243 | 28 | 264 | 2.90e-29 | 115 |
| MsG0880041888.01.T01 | MTR_3g072500 | 32.663 | 199 | 129 | 3 | 6 | 202 | 21 | 216 | 6.50e-29 | 112 |
| MsG0880041888.01.T01 | MTR_3g072530 | 30.824 | 279 | 142 | 6 | 6 | 242 | 15 | 284 | 1.95e-28 | 113 |
| MsG0880041888.01.T01 | MTR_1g052205 | 26.613 | 248 | 159 | 4 | 120 | 354 | 14 | 251 | 5.54e-27 | 107 |
| MsG0880041888.01.T01 | MTR_1g051120 | 31.818 | 198 | 130 | 3 | 6 | 202 | 17 | 210 | 5.01e-25 | 101 |
| MsG0880041888.01.T01 | MTR_4g094342 | 31.068 | 206 | 138 | 2 | 6 | 208 | 14 | 218 | 1.74e-24 | 101 |
| MsG0880041888.01.T01 | MTR_1g051120 | 31.472 | 197 | 130 | 3 | 6 | 201 | 17 | 209 | 6.83e-24 | 99.8 |
| MsG0880041888.01.T01 | MTR_4g094340 | 32.020 | 203 | 125 | 4 | 6 | 202 | 28 | 223 | 3.31e-23 | 97.1 |
| MsG0880041888.01.T01 | MTR_5g034980 | 29.302 | 215 | 147 | 3 | 30 | 243 | 32 | 242 | 9.96e-20 | 89.0 |
| MsG0880041888.01.T01 | MTR_6g007757 | 31.020 | 245 | 150 | 5 | 5 | 242 | 12 | 244 | 5.15e-19 | 86.3 |
| MsG0880041888.01.T01 | MTR_4g094348 | 34.127 | 126 | 72 | 2 | 86 | 202 | 2 | 125 | 6.99e-16 | 75.5 |
| MsG0880041888.01.T01 | MTR_1g014790 | 37.795 | 127 | 65 | 3 | 89 | 208 | 46 | 165 | 2.94e-14 | 71.2 |
| MsG0880041888.01.T01 | MTR_3g093450 | 27.692 | 195 | 88 | 6 | 139 | 323 | 25 | 176 | 1.64e-11 | 63.5 |
| MsG0880041888.01.T01 | MTR_1g068720 | 32.000 | 125 | 78 | 3 | 207 | 326 | 101 | 223 | 3.57e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880041888.01.T01 | AT4G30420 | 50.275 | 364 | 171 | 3 | 1 | 362 | 4 | 359 | 2.02e-129 | 376 |
| MsG0880041888.01.T01 | AT4G30420 | 50.420 | 357 | 167 | 3 | 8 | 362 | 1 | 349 | 2.27e-126 | 368 |
| MsG0880041888.01.T01 | AT4G28040 | 44.970 | 338 | 167 | 5 | 4 | 339 | 6 | 326 | 2.32e-99 | 299 |
| MsG0880041888.01.T01 | AT4G28040 | 44.970 | 338 | 167 | 5 | 4 | 339 | 6 | 326 | 2.32e-99 | 299 |
| MsG0880041888.01.T01 | AT4G28040 | 44.970 | 338 | 167 | 5 | 4 | 339 | 6 | 326 | 2.32e-99 | 299 |
| MsG0880041888.01.T01 | AT4G28040 | 44.970 | 338 | 167 | 5 | 4 | 339 | 6 | 326 | 2.32e-99 | 299 |
| MsG0880041888.01.T01 | AT4G28040 | 44.970 | 338 | 167 | 5 | 4 | 339 | 6 | 326 | 2.32e-99 | 299 |
| MsG0880041888.01.T01 | AT1G75500 | 38.855 | 332 | 197 | 2 | 8 | 334 | 22 | 352 | 1.72e-76 | 241 |
| MsG0880041888.01.T01 | AT1G75500 | 38.855 | 332 | 197 | 2 | 8 | 334 | 22 | 352 | 1.72e-76 | 241 |
| MsG0880041888.01.T01 | AT3G18200 | 37.425 | 334 | 201 | 4 | 7 | 338 | 36 | 363 | 4.68e-75 | 238 |
| MsG0880041888.01.T01 | AT3G53210 | 39.432 | 317 | 190 | 2 | 8 | 324 | 12 | 326 | 9.96e-72 | 228 |
| MsG0880041888.01.T01 | AT4G08300 | 33.602 | 372 | 234 | 5 | 1 | 364 | 6 | 372 | 1.71e-69 | 223 |
| MsG0880041888.01.T01 | AT1G21890 | 36.890 | 328 | 199 | 2 | 6 | 326 | 11 | 337 | 3.16e-67 | 218 |
| MsG0880041888.01.T01 | AT1G09380 | 35.202 | 321 | 205 | 2 | 5 | 323 | 7 | 326 | 7.32e-64 | 208 |
| MsG0880041888.01.T01 | AT2G37460 | 33.239 | 352 | 221 | 5 | 1 | 350 | 10 | 349 | 5.01e-63 | 206 |
| MsG0880041888.01.T01 | AT5G64700 | 35.440 | 364 | 212 | 7 | 1 | 354 | 3 | 353 | 2.19e-62 | 204 |
| MsG0880041888.01.T01 | AT1G44800 | 33.051 | 354 | 227 | 4 | 1 | 349 | 6 | 354 | 2.23e-62 | 204 |
| MsG0880041888.01.T01 | AT2G39510 | 33.945 | 327 | 212 | 3 | 1 | 326 | 3 | 326 | 2.95e-62 | 204 |
| MsG0880041888.01.T01 | AT2G40900 | 33.434 | 332 | 212 | 4 | 6 | 336 | 11 | 334 | 4.76e-61 | 201 |
| MsG0880041888.01.T01 | AT3G53210 | 41.393 | 244 | 142 | 1 | 81 | 324 | 27 | 269 | 5.68e-61 | 199 |
| MsG0880041888.01.T01 | AT5G07050 | 34.072 | 361 | 210 | 7 | 6 | 349 | 18 | 367 | 6.16e-61 | 201 |
| MsG0880041888.01.T01 | AT4G08290 | 34.247 | 365 | 229 | 4 | 1 | 358 | 8 | 368 | 2.32e-59 | 197 |
| MsG0880041888.01.T01 | AT1G43650 | 33.432 | 338 | 217 | 3 | 8 | 344 | 9 | 339 | 1.17e-58 | 194 |
| MsG0880041888.01.T01 | AT5G13670 | 33.728 | 338 | 198 | 6 | 2 | 326 | 4 | 328 | 1.29e-58 | 195 |
| MsG0880041888.01.T01 | AT3G56620 | 33.648 | 318 | 204 | 3 | 6 | 323 | 11 | 321 | 1.25e-56 | 189 |
| MsG0880041888.01.T01 | AT1G21890 | 35.294 | 306 | 190 | 2 | 6 | 304 | 11 | 315 | 1.72e-55 | 186 |
| MsG0880041888.01.T01 | AT3G18200 | 39.076 | 238 | 138 | 3 | 103 | 338 | 1 | 233 | 3.18e-55 | 182 |
| MsG0880041888.01.T01 | AT3G28050 | 33.962 | 371 | 226 | 8 | 5 | 370 | 11 | 367 | 2.69e-53 | 181 |
| MsG0880041888.01.T01 | AT1G11450 | 33.784 | 296 | 185 | 4 | 40 | 331 | 6 | 294 | 1.45e-52 | 177 |
| MsG0880041888.01.T01 | AT5G40230 | 32.303 | 356 | 233 | 4 | 5 | 357 | 20 | 370 | 1.79e-52 | 178 |
| MsG0880041888.01.T01 | AT3G30340 | 32.899 | 307 | 200 | 3 | 30 | 334 | 35 | 337 | 2.07e-52 | 178 |
| MsG0880041888.01.T01 | AT1G11450 | 33.115 | 305 | 193 | 4 | 31 | 331 | 41 | 338 | 2.81e-52 | 177 |
| MsG0880041888.01.T01 | AT4G01440 | 31.548 | 336 | 217 | 5 | 4 | 334 | 8 | 335 | 3.57e-52 | 177 |
| MsG0880041888.01.T01 | AT5G40240 | 31.988 | 347 | 231 | 4 | 5 | 348 | 19 | 363 | 2.13e-51 | 176 |
| MsG0880041888.01.T01 | AT5G40240 | 31.988 | 347 | 231 | 4 | 5 | 348 | 19 | 363 | 2.13e-51 | 176 |
| MsG0880041888.01.T01 | AT5G40240 | 31.988 | 347 | 231 | 4 | 5 | 348 | 33 | 377 | 3.08e-51 | 176 |
| MsG0880041888.01.T01 | AT1G11460 | 33.030 | 330 | 203 | 6 | 6 | 327 | 16 | 335 | 7.86e-51 | 173 |
| MsG0880041888.01.T01 | AT1G11450 | 33.447 | 293 | 184 | 4 | 43 | 331 | 2 | 287 | 7.88e-51 | 172 |
| MsG0880041888.01.T01 | AT1G01070 | 32.416 | 327 | 218 | 3 | 1 | 326 | 11 | 335 | 4.92e-50 | 172 |
| MsG0880041888.01.T01 | AT3G53210 | 37.398 | 246 | 152 | 2 | 8 | 253 | 12 | 255 | 5.62e-50 | 169 |
| MsG0880041888.01.T01 | AT4G01430 | 28.969 | 359 | 246 | 4 | 2 | 355 | 5 | 359 | 6.00e-49 | 169 |
| MsG0880041888.01.T01 | AT5G47470 | 32.523 | 329 | 206 | 5 | 9 | 332 | 61 | 378 | 2.20e-48 | 168 |
| MsG0880041888.01.T01 | AT5G47470 | 32.523 | 329 | 206 | 5 | 9 | 332 | 33 | 350 | 2.46e-48 | 167 |
| MsG0880041888.01.T01 | AT5G47470 | 32.523 | 329 | 206 | 5 | 9 | 332 | 61 | 378 | 2.53e-48 | 168 |
| MsG0880041888.01.T01 | AT2G37450 | 32.927 | 328 | 191 | 5 | 1 | 326 | 4 | 304 | 2.07e-47 | 164 |
| MsG0880041888.01.T01 | AT4G15540 | 33.140 | 344 | 216 | 3 | 5 | 347 | 16 | 346 | 4.64e-46 | 161 |
| MsG0880041888.01.T01 | AT4G15540 | 33.140 | 344 | 216 | 3 | 5 | 347 | 16 | 346 | 4.64e-46 | 161 |
| MsG0880041888.01.T01 | AT4G01440 | 30.421 | 309 | 202 | 5 | 4 | 307 | 8 | 308 | 6.96e-46 | 160 |
| MsG0880041888.01.T01 | AT1G11450 | 33.871 | 248 | 160 | 2 | 85 | 331 | 2 | 246 | 1.17e-45 | 157 |
| MsG0880041888.01.T01 | AT1G01070 | 35.294 | 255 | 163 | 2 | 74 | 327 | 36 | 289 | 4.72e-45 | 157 |
| MsG0880041888.01.T01 | AT5G45370 | 30.422 | 332 | 214 | 5 | 9 | 326 | 23 | 351 | 3.36e-44 | 157 |
| MsG0880041888.01.T01 | AT5G45370 | 30.422 | 332 | 214 | 5 | 9 | 326 | 23 | 351 | 3.36e-44 | 157 |
| MsG0880041888.01.T01 | AT5G45370 | 30.408 | 319 | 207 | 5 | 9 | 326 | 23 | 327 | 1.96e-42 | 152 |
| MsG0880041888.01.T01 | AT1G11450 | 31.655 | 278 | 179 | 4 | 31 | 304 | 41 | 311 | 2.13e-41 | 148 |
| MsG0880041888.01.T01 | AT1G70260 | 28.614 | 339 | 231 | 5 | 5 | 336 | 11 | 345 | 5.27e-41 | 148 |
| MsG0880041888.01.T01 | AT3G45870 | 29.721 | 323 | 216 | 3 | 8 | 321 | 14 | 334 | 1.63e-40 | 147 |
| MsG0880041888.01.T01 | AT4G01430 | 28.662 | 314 | 221 | 3 | 2 | 313 | 5 | 317 | 5.02e-39 | 142 |
| MsG0880041888.01.T01 | AT1G68170 | 30.341 | 323 | 221 | 3 | 7 | 327 | 14 | 334 | 6.93e-39 | 142 |
| MsG0880041888.01.T01 | AT1G68170 | 30.341 | 323 | 221 | 3 | 7 | 327 | 4 | 324 | 7.85e-39 | 142 |
| MsG0880041888.01.T01 | AT5G64700 | 34.221 | 263 | 157 | 6 | 1 | 253 | 3 | 259 | 2.47e-38 | 138 |
| MsG0880041888.01.T01 | AT4G19185 | 28.701 | 331 | 221 | 4 | 9 | 326 | 24 | 352 | 3.44e-38 | 141 |
| MsG0880041888.01.T01 | AT1G60050 | 27.248 | 367 | 257 | 5 | 2 | 359 | 9 | 374 | 2.67e-37 | 138 |
| MsG0880041888.01.T01 | AT5G40210 | 30.061 | 326 | 203 | 5 | 9 | 331 | 16 | 319 | 2.74e-37 | 137 |
| MsG0880041888.01.T01 | AT4G01440 | 31.169 | 231 | 153 | 2 | 106 | 334 | 1 | 227 | 7.81e-37 | 134 |
| MsG0880041888.01.T01 | AT4G01440 | 31.169 | 231 | 153 | 2 | 106 | 334 | 1 | 227 | 7.81e-37 | 134 |
| MsG0880041888.01.T01 | AT1G25270 | 28.972 | 321 | 225 | 2 | 7 | 326 | 4 | 322 | 8.44e-36 | 134 |
| MsG0880041888.01.T01 | AT1G43650 | 34.167 | 240 | 144 | 5 | 8 | 243 | 9 | 238 | 2.05e-34 | 128 |
| MsG0880041888.01.T01 | AT3G45870 | 28.758 | 306 | 207 | 3 | 8 | 304 | 14 | 317 | 4.04e-34 | 129 |
| MsG0880041888.01.T01 | AT4G01450 | 29.846 | 325 | 221 | 2 | 4 | 328 | 8 | 325 | 6.93e-34 | 129 |
| MsG0880041888.01.T01 | AT4G01430 | 30.769 | 221 | 152 | 1 | 135 | 354 | 1 | 221 | 3.31e-33 | 124 |
| MsG0880041888.01.T01 | AT4G08290 | 34.286 | 245 | 154 | 2 | 1 | 242 | 8 | 248 | 4.26e-33 | 125 |
| MsG0880041888.01.T01 | AT2G37450 | 33.047 | 233 | 149 | 3 | 96 | 326 | 5 | 232 | 5.34e-33 | 124 |
| MsG0880041888.01.T01 | AT4G16620 | 28.242 | 347 | 227 | 6 | 14 | 354 | 20 | 350 | 2.43e-32 | 125 |
| MsG0880041888.01.T01 | AT4G01450 | 28.571 | 301 | 208 | 2 | 4 | 304 | 8 | 301 | 3.75e-32 | 124 |
| MsG0880041888.01.T01 | AT4G19185 | 29.804 | 255 | 165 | 3 | 80 | 321 | 16 | 269 | 9.20e-32 | 122 |
| MsG0880041888.01.T01 | AT3G28130 | 29.097 | 299 | 207 | 5 | 30 | 326 | 37 | 332 | 1.18e-31 | 123 |
| MsG0880041888.01.T01 | AT3G28070 | 29.779 | 272 | 176 | 7 | 91 | 359 | 9 | 268 | 1.86e-31 | 120 |
| MsG0880041888.01.T01 | AT5G45370 | 28.800 | 250 | 162 | 4 | 91 | 326 | 2 | 249 | 3.51e-31 | 120 |
| MsG0880041888.01.T01 | AT5G45370 | 28.800 | 250 | 162 | 4 | 91 | 326 | 2 | 249 | 3.51e-31 | 120 |
| MsG0880041888.01.T01 | AT3G28130 | 29.167 | 240 | 166 | 4 | 89 | 326 | 9 | 246 | 8.92e-31 | 118 |
| MsG0880041888.01.T01 | AT3G28130 | 29.167 | 240 | 166 | 4 | 89 | 326 | 9 | 246 | 8.92e-31 | 118 |
| MsG0880041888.01.T01 | AT3G28070 | 29.412 | 272 | 177 | 7 | 91 | 359 | 101 | 360 | 1.21e-30 | 120 |
| MsG0880041888.01.T01 | AT4G01440 | 29.297 | 256 | 168 | 5 | 4 | 254 | 8 | 255 | 1.77e-29 | 115 |
| MsG0880041888.01.T01 | AT3G28100 | 27.746 | 346 | 239 | 5 | 9 | 353 | 17 | 352 | 1.87e-29 | 117 |
| MsG0880041888.01.T01 | AT3G28080 | 28.148 | 270 | 184 | 4 | 91 | 359 | 9 | 269 | 2.50e-28 | 112 |
| MsG0880041888.01.T01 | AT3G28080 | 28.148 | 270 | 184 | 4 | 91 | 359 | 9 | 269 | 2.50e-28 | 112 |
| MsG0880041888.01.T01 | AT3G28080 | 28.148 | 270 | 184 | 4 | 91 | 359 | 9 | 269 | 2.50e-28 | 112 |
| MsG0880041888.01.T01 | AT3G28080 | 28.148 | 270 | 184 | 4 | 91 | 359 | 9 | 269 | 2.50e-28 | 112 |
| MsG0880041888.01.T01 | AT3G28080 | 28.148 | 270 | 184 | 4 | 91 | 359 | 98 | 358 | 1.46e-27 | 112 |
| MsG0880041888.01.T01 | AT3G28080 | 28.148 | 270 | 184 | 4 | 91 | 359 | 90 | 350 | 1.92e-27 | 111 |
| MsG0880041888.01.T01 | AT2G37450 | 32.075 | 212 | 137 | 3 | 117 | 326 | 59 | 265 | 5.26e-27 | 108 |
| MsG0880041888.01.T01 | AT5G45370 | 29.091 | 220 | 140 | 4 | 121 | 326 | 74 | 291 | 6.89e-26 | 106 |
| MsG0880041888.01.T01 | AT3G45870 | 28.516 | 256 | 172 | 3 | 8 | 254 | 14 | 267 | 9.77e-26 | 105 |
| MsG0880041888.01.T01 | AT3G30340 | 30.396 | 227 | 152 | 3 | 30 | 254 | 35 | 257 | 2.19e-25 | 104 |
| MsG0880041888.01.T01 | AT4G24980 | 28.716 | 296 | 136 | 7 | 31 | 323 | 12 | 235 | 2.44e-25 | 103 |
| MsG0880041888.01.T01 | AT3G45870 | 29.524 | 210 | 138 | 2 | 121 | 321 | 51 | 259 | 6.47e-25 | 103 |
| MsG0880041888.01.T01 | AT3G28070 | 27.984 | 243 | 160 | 7 | 120 | 359 | 1 | 231 | 1.25e-23 | 98.2 |
| MsG0880041888.01.T01 | AT3G28130 | 27.273 | 209 | 148 | 4 | 120 | 326 | 1 | 207 | 5.12e-23 | 96.7 |
| MsG0880041888.01.T01 | AT4G01450 | 27.660 | 235 | 163 | 2 | 6 | 240 | 10 | 237 | 9.10e-23 | 96.7 |
| MsG0880041888.01.T01 | AT4G16620 | 27.547 | 265 | 170 | 6 | 96 | 354 | 5 | 253 | 9.04e-22 | 94.0 |
| MsG0880041888.01.T01 | AT4G16620 | 27.547 | 265 | 170 | 6 | 96 | 354 | 5 | 253 | 9.04e-22 | 94.0 |
| MsG0880041888.01.T01 | AT3G28070 | 29.032 | 217 | 148 | 5 | 91 | 304 | 101 | 314 | 4.77e-21 | 92.8 |
| MsG0880041888.01.T01 | AT4G16620 | 32.701 | 211 | 132 | 3 | 14 | 221 | 20 | 223 | 9.39e-21 | 91.3 |
| MsG0880041888.01.T01 | AT3G28080 | 26.556 | 241 | 167 | 4 | 120 | 359 | 1 | 232 | 2.66e-20 | 89.0 |
| MsG0880041888.01.T01 | AT4G01450 | 28.431 | 204 | 139 | 2 | 6 | 209 | 10 | 206 | 2.67e-20 | 89.4 |
| MsG0880041888.01.T01 | AT3G45870 | 32.168 | 143 | 96 | 1 | 179 | 321 | 42 | 183 | 3.03e-19 | 86.3 |
| MsG0880041888.01.T01 | AT3G28080 | 25.651 | 269 | 138 | 4 | 91 | 359 | 9 | 215 | 6.59e-19 | 84.7 |
| MsG0880041888.01.T01 | AT3G45870 | 27.979 | 193 | 129 | 2 | 121 | 304 | 51 | 242 | 8.12e-19 | 85.5 |
| MsG0880041888.01.T01 | AT3G45870 | 27.979 | 193 | 129 | 2 | 121 | 304 | 51 | 242 | 8.12e-19 | 85.5 |
| MsG0880041888.01.T01 | AT3G28080 | 25.651 | 269 | 138 | 4 | 91 | 359 | 98 | 304 | 2.96e-18 | 84.7 |
| MsG0880041888.01.T01 | AT3G28130 | 27.111 | 225 | 160 | 4 | 30 | 252 | 37 | 259 | 7.91e-13 | 68.6 |
| MsG0880041888.01.T01 | AT3G45870 | 27.397 | 146 | 96 | 2 | 118 | 254 | 1 | 145 | 1.93e-12 | 65.1 |
| MsG0880041888.01.T01 | AT3G28100 | 28.704 | 216 | 153 | 1 | 7 | 222 | 15 | 229 | 9.36e-12 | 65.1 |
| MsG0880041888.01.T01 | AT3G28130 | 31.034 | 174 | 117 | 3 | 30 | 202 | 37 | 208 | 1.13e-11 | 64.3 |
| MsG0880041888.01.T01 | AT3G28100 | 27.119 | 236 | 170 | 2 | 9 | 243 | 17 | 251 | 6.24e-11 | 62.8 |
Find 67 sgRNAs with CRISPR-Local
Find 99 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATCATTGTCCCCACTATTT+TGG | 0.190725 | 8:+732309 | None:intergenic |
| ATCAATTCTTTGCTTCAATT+TGG | 0.217860 | 8:-731752 | MsG0880041888.01.T01:CDS |
| TTATTCTTGACCTCACTAAT+TGG | 0.247020 | 8:-732703 | MsG0880041888.01.T01:CDS |
| ATCAACACCATAGCCATTAT+TGG | 0.257939 | 8:+732994 | None:intergenic |
| AATTGATCTTCCACACATTC+AGG | 0.277827 | 8:+731768 | None:intergenic |
| AGGCTTGTATACTGTACTTT+GGG | 0.280415 | 8:-731322 | MsG0880041888.01.T01:CDS |
| TTCATGTTTGTTAGCTTGAT+TGG | 0.288721 | 8:-731363 | MsG0880041888.01.T01:intron |
| GTTCTTCCAAATGATGAGTT+TGG | 0.311768 | 8:+731181 | None:intergenic |
| ACTGTGTTGCCTGGTCAATT+TGG | 0.328526 | 8:-732135 | MsG0880041888.01.T01:CDS |
| AGAGTTTATATATGCAGGTT+TGG | 0.333917 | 8:-732971 | MsG0880041888.01.T01:CDS |
| TCTACATTATTTAGTAGCTT+TGG | 0.345668 | 8:+732247 | None:intergenic |
| GGAATACTACCTTCCAATAA+TGG | 0.346538 | 8:-733007 | MsG0880041888.01.T01:CDS |
| GCTGTAAATGACAAGTAATT+AGG | 0.355735 | 8:+731851 | None:intergenic |
| ATATATGCAGGTTTGGGTAT+TGG | 0.362080 | 8:-732964 | MsG0880041888.01.T01:CDS |
| GAGTTTATATATGCAGGTTT+GGG | 0.373910 | 8:-732970 | MsG0880041888.01.T01:CDS |
| TTATTGCCAAACTCATCATT+TGG | 0.389599 | 8:-731187 | MsG0880041888.01.T01:CDS |
| TTGATAGAGTTTATATATGC+AGG | 0.392453 | 8:-732976 | MsG0880041888.01.T01:CDS |
| CTTGCCATGATTGACTTTGA+AGG | 0.404722 | 8:+732214 | None:intergenic |
| GTTAGCTTGATTGGTGCAAT+TGG | 0.407661 | 8:-731354 | MsG0880041888.01.T01:intron |
| TTTGTAATAGCAGCCTTTGT+AGG | 0.408588 | 8:-732472 | MsG0880041888.01.T01:CDS |
| TCATTAATAATCATCAACTT+TGG | 0.411929 | 8:+731255 | None:intergenic |
| GGTGCAATTGGAGTGATCAT+AGG | 0.416497 | 8:-731342 | MsG0880041888.01.T01:CDS |
| AAGAACTATAGCCAAAATAG+TGG | 0.417858 | 8:-732320 | MsG0880041888.01.T01:CDS |
| TATTCTTGACCTCACTAATT+GGG | 0.424692 | 8:-732702 | MsG0880041888.01.T01:intron |
| TAGGCTTGTATACTGTACTT+TGG | 0.445695 | 8:-731323 | MsG0880041888.01.T01:CDS |
| TCTTTGAAATGCACCAAGCT+TGG | 0.450004 | 8:+731579 | None:intergenic |
| CTAGTAGTGATAATGAGAAT+TGG | 0.451386 | 8:-732186 | MsG0880041888.01.T01:CDS |
| AGTATCTATTGCATTGTTGA+AGG | 0.465625 | 8:-732272 | MsG0880041888.01.T01:CDS |
| TTAGGATGGCTTGCATAAGC+TGG | 0.480462 | 8:+731869 | None:intergenic |
| TTGAGTAATGTGGACTAAGC+AGG | 0.493281 | 8:+731150 | None:intergenic |
| GATAATGAGAATTGGTTGCT+TGG | 0.497928 | 8:-732178 | MsG0880041888.01.T01:CDS |
| ATTATTAATGAGACAGAGGA+AGG | 0.498746 | 8:-731243 | MsG0880041888.01.T01:CDS |
| GCTATTACAAATGTAACTGC+TGG | 0.501198 | 8:+732484 | None:intergenic |
| TTTCTTGACAGGAGAAACTC+TGG | 0.503537 | 8:-732760 | MsG0880041888.01.T01:intron |
| TGCTATCTTGTTGCTTCATG+AGG | 0.504097 | 8:-731498 | MsG0880041888.01.T01:CDS |
| GTCACAATTAATGTGAAAAG+AGG | 0.504645 | 8:+731527 | None:intergenic |
| TTGTAATAGCAGCCTTTGTA+GGG | 0.505236 | 8:-732471 | MsG0880041888.01.T01:intron |
| CTACCTTCCAATAATGGCTA+TGG | 0.528631 | 8:-733001 | MsG0880041888.01.T01:CDS |
| TATACCTTCAAAGTCAATCA+TGG | 0.529801 | 8:-732218 | MsG0880041888.01.T01:CDS |
| AGAACTATAGCCAAAATAGT+GGG | 0.530722 | 8:-732319 | MsG0880041888.01.T01:CDS |
| CTTCATGAGGAAATATACAT+TGG | 0.532240 | 8:-731485 | MsG0880041888.01.T01:CDS |
| CGGTACACAACAAATACCCT+AGG | 0.540219 | 8:+732910 | None:intergenic |
| ATTACTTGTCATTTACAGCA+TGG | 0.541204 | 8:-731847 | MsG0880041888.01.T01:CDS |
| TGTAACTGCTGGAACAAGGT+TGG | 0.541791 | 8:+732495 | None:intergenic |
| TTTGCAGGGTTTGAGCCCTA+GGG | 0.543458 | 8:-732926 | MsG0880041888.01.T01:CDS |
| GATGATTATTAATGAGACAG+AGG | 0.548661 | 8:-731247 | MsG0880041888.01.T01:CDS |
| GGGACAATGATATGTATAAG+TGG | 0.560003 | 8:-732298 | MsG0880041888.01.T01:CDS |
| AGCAACAGGAGCAAGAAGAA+TGG | 0.560164 | 8:+732873 | None:intergenic |
| GTATCTATTGCATTGTTGAA+GGG | 0.561664 | 8:-732271 | MsG0880041888.01.T01:CDS |
| ATGAGGAAATATACATTGGA+AGG | 0.568135 | 8:-731481 | MsG0880041888.01.T01:intron |
| CAAAATGAGCCAAATTGACC+AGG | 0.569290 | 8:+732126 | None:intergenic |
| AGTAATTACGTACCCTACAA+AGG | 0.570122 | 8:+732459 | None:intergenic |
| TAACATTCTATCTCCAAGCT+TGG | 0.571991 | 8:-731592 | MsG0880041888.01.T01:CDS |
| CAAATGTAACTGCTGGAACA+AGG | 0.576764 | 8:+732491 | None:intergenic |
| TGCTGGAACAAGGTTGGACA+TGG | 0.579813 | 8:+732501 | None:intergenic |
| TCACAATTAATGTGAAAAGA+GGG | 0.589292 | 8:+731528 | None:intergenic |
| GGCTTGTATACTGTACTTTG+GGG | 0.593434 | 8:-731321 | MsG0880041888.01.T01:CDS |
| GCTTGGTGCATTTCAAAGAG+AGG | 0.611097 | 8:-731575 | MsG0880041888.01.T01:CDS |
| TAAATGACAAGTAATTAGGA+TGG | 0.617968 | 8:+731855 | None:intergenic |
| ACACCATAGCCATTATTGGA+AGG | 0.627721 | 8:+732998 | None:intergenic |
| TTATTAATGAGACAGAGGAA+GGG | 0.651566 | 8:-731242 | MsG0880041888.01.T01:CDS |
| GGAAACTAACCCAATTAGTG+AGG | 0.656012 | 8:+732693 | None:intergenic |
| GAATGGTTGCAATAGCATGA+CGG | 0.671471 | 8:+732890 | None:intergenic |
| TTAAACATAGCAGAGAAGAG+AGG | 0.674281 | 8:+731551 | None:intergenic |
| TTGAATCAGACCTGAATGTG+TGG | 0.674327 | 8:-731778 | MsG0880041888.01.T01:CDS |
| GAACTATAGCCAAAATAGTG+GGG | 0.681705 | 8:-732318 | MsG0880041888.01.T01:CDS |
| GGTACACAACAAATACCCTA+GGG | 0.684227 | 8:+732911 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATCAAAATTTATTTTTTGA+GGG | - | Chr8:731617-731636 | MsG0880041888.01.T01:intron | 10.0% |
| !! | AGAAAAACTCTTTAAATTTA+AGG | + | Chr8:731447-731466 | None:intergenic | 15.0% |
| !! | ATATTATTATTACTAGAGAA+TGG | + | Chr8:731504-731523 | None:intergenic | 15.0% |
| !!! | GAATCAAAATTTATTTTTTG+AGG | - | Chr8:731616-731635 | MsG0880041888.01.T01:intron | 15.0% |
| !! | AAACAAAACAATCATTTAGT+TGG | + | Chr8:732792-732811 | None:intergenic | 20.0% |
| !! | AAATGTAATTACCACTAATT+AGG | + | Chr8:732537-732556 | None:intergenic | 20.0% |
| !! | AATACTATTATACTACAGAA+TGG | - | Chr8:731808-731827 | MsG0880041888.01.T01:CDS | 20.0% |
| !! | ATAAATTAATACATCATCAG+TGG | - | Chr8:732511-732530 | MsG0880041888.01.T01:CDS | 20.0% |
| !! | CTTATCTCAAATTGAATTAT+AGG | - | Chr8:732757-732776 | MsG0880041888.01.T01:intron | 20.0% |
| !! | TCATTAATAATCATCAACTT+TGG | + | Chr8:732921-732940 | None:intergenic | 20.0% |
| !!! | AGTGGTAATTACATTTTATA+GGG | - | Chr8:732541-732560 | MsG0880041888.01.T01:CDS | 20.0% |
| !!! | CGAATGTGTTTTTTAATTAT+TGG | - | Chr8:731774-731793 | MsG0880041888.01.T01:CDS | 20.0% |
| !!! | TAGTGGTAATTACATTTTAT+AGG | - | Chr8:732540-732559 | MsG0880041888.01.T01:CDS | 20.0% |
| ! | AATGAAGAGAATAATAGAAG+TGG | + | Chr8:731355-731374 | None:intergenic | 25.0% |
| ! | ATCAATTCTTTGCTTCAATT+TGG | - | Chr8:732421-732440 | MsG0880041888.01.T01:intron | 25.0% |
| ! | CATATTTACACTACTCATTA+CGG | - | Chr8:731529-731548 | MsG0880041888.01.T01:CDS | 25.0% |
| ! | TAAATGACAAGTAATTAGGA+TGG | + | Chr8:732321-732340 | None:intergenic | 25.0% |
| ! | TATCATATTATACTTTCCTC+AGG | - | Chr8:732279-732298 | MsG0880041888.01.T01:CDS | 25.0% |
| ! | TCACAATTAATGTGAAAAGA+GGG | + | Chr8:732648-732667 | None:intergenic | 25.0% |
| ! | TCATAATGTACTATGTGTTA+AGG | - | Chr8:732117-732136 | MsG0880041888.01.T01:intron | 25.0% |
| ! | TCTACATTATTTAGTAGCTT+TGG | + | Chr8:731929-731948 | None:intergenic | 25.0% |
| ! | TTGATAGAGTTTATATATGC+AGG | - | Chr8:731197-731216 | MsG0880041888.01.T01:CDS | 25.0% |
| !! | TACATTTTATAGGGAATCAT+GGG | - | Chr8:732550-732569 | MsG0880041888.01.T01:CDS | 25.0% |
| !! | TTACATTTTATAGGGAATCA+TGG | - | Chr8:732549-732568 | MsG0880041888.01.T01:CDS | 25.0% |
| !!! | ACAAGAATTGTATTTTTGCA+GGG | - | Chr8:731233-731252 | MsG0880041888.01.T01:CDS | 25.0% |
| !!! | TATTTCTTTTGTTTCTTGAC+AGG | - | Chr8:731402-731421 | MsG0880041888.01.T01:intron | 25.0% |
| AAGAACTATAGCCAAAATAG+TGG | - | Chr8:731853-731872 | MsG0880041888.01.T01:CDS | 30.0% | |
| AGAACTATAGCCAAAATAGT+GGG | - | Chr8:731854-731873 | MsG0880041888.01.T01:CDS | 30.0% | |
| AGAGTTTATATATGCAGGTT+TGG | - | Chr8:731202-731221 | MsG0880041888.01.T01:CDS | 30.0% | |
| AGTATCTATTGCATTGTTGA+AGG | - | Chr8:731901-731920 | MsG0880041888.01.T01:intron | 30.0% | |
| ATGAGGAAATATACATTGGA+AGG | - | Chr8:732692-732711 | MsG0880041888.01.T01:intron | 30.0% | |
| ATTATTAATGAGACAGAGGA+AGG | - | Chr8:732930-732949 | MsG0880041888.01.T01:CDS | 30.0% | |
| CTTCATGAGGAAATATACAT+TGG | - | Chr8:732688-732707 | MsG0880041888.01.T01:intron | 30.0% | |
| GAGTTTATATATGCAGGTTT+GGG | - | Chr8:731203-731222 | MsG0880041888.01.T01:CDS | 30.0% | |
| GATGATTATTAATGAGACAG+AGG | - | Chr8:732926-732945 | MsG0880041888.01.T01:CDS | 30.0% | |
| GCTGTAAATGACAAGTAATT+AGG | + | Chr8:732325-732344 | None:intergenic | 30.0% | |
| GTATCTATTGCATTGTTGAA+GGG | - | Chr8:731902-731921 | MsG0880041888.01.T01:intron | 30.0% | |
| GTCACAATTAATGTGAAAAG+AGG | + | Chr8:732649-732668 | None:intergenic | 30.0% | |
| TATACCTTCAAAGTCAATCA+TGG | - | Chr8:731955-731974 | MsG0880041888.01.T01:intron | 30.0% | |
| TATTCTTGACCTCACTAATT+GGG | - | Chr8:731471-731490 | MsG0880041888.01.T01:intron | 30.0% | |
| TTATTAATGAGACAGAGGAA+GGG | - | Chr8:732931-732950 | MsG0880041888.01.T01:CDS | 30.0% | |
| TTATTCTTGACCTCACTAAT+TGG | - | Chr8:731470-731489 | MsG0880041888.01.T01:intron | 30.0% | |
| TTATTGCCAAACTCATCATT+TGG | - | Chr8:732986-733005 | MsG0880041888.01.T01:CDS | 30.0% | |
| ! | ATTACTTGTCATTTACAGCA+TGG | - | Chr8:732326-732345 | MsG0880041888.01.T01:CDS | 30.0% |
| ! | CTAGTAGTGATAATGAGAAT+TGG | - | Chr8:731987-732006 | MsG0880041888.01.T01:intron | 30.0% |
| ! | TGATTTGTGTTATCATGTCA+TGG | - | Chr8:731567-731586 | MsG0880041888.01.T01:CDS | 30.0% |
| ! | TGCATTTTATATGCAGTATG+TGG | - | Chr8:732445-732464 | MsG0880041888.01.T01:intron | 30.0% |
| ! | TGTACTATGTGTTAAGGTTT+TGG | - | Chr8:732123-732142 | MsG0880041888.01.T01:CDS | 30.0% |
| ! | TTCATGTTTGTTAGCTTGAT+TGG | - | Chr8:732810-732829 | MsG0880041888.01.T01:intron | 30.0% |
| !! | CACAAGAATTGTATTTTTGC+AGG | - | Chr8:731232-731251 | MsG0880041888.01.T01:CDS | 30.0% |
| AATTGATCTTCCACACATTC+AGG | + | Chr8:732408-732427 | None:intergenic | 35.0% | |
| AGGCTTGTATACTGTACTTT+GGG | - | Chr8:732851-732870 | MsG0880041888.01.T01:intron | 35.0% | |
| AGTAATTACGTACCCTACAA+AGG | + | Chr8:731717-731736 | None:intergenic | 35.0% | |
| ATATATGCAGGTTTGGGTAT+TGG | - | Chr8:731209-731228 | MsG0880041888.01.T01:CDS | 35.0% | |
| ATCAACACCATAGCCATTAT+TGG | + | Chr8:731182-731201 | None:intergenic | 35.0% | |
| GAACTATAGCCAAAATAGTG+GGG | - | Chr8:731855-731874 | MsG0880041888.01.T01:CDS | 35.0% | |
| GATAATGAGAATTGGTTGCT+TGG | - | Chr8:731995-732014 | MsG0880041888.01.T01:intron | 35.0% | |
| GCTATTACAAATGTAACTGC+TGG | + | Chr8:731692-731711 | None:intergenic | 35.0% | |
| GGAATACTACCTTCCAATAA+TGG | - | Chr8:731166-731185 | MsG0880041888.01.T01:CDS | 35.0% | |
| GGGACAATGATATGTATAAG+TGG | - | Chr8:731875-731894 | MsG0880041888.01.T01:CDS | 35.0% | |
| GTTCTTCCAAATGATGAGTT+TGG | + | Chr8:732995-733014 | None:intergenic | 35.0% | |
| TAACATTCTATCTCCAAGCT+TGG | - | Chr8:732581-732600 | MsG0880041888.01.T01:intron | 35.0% | |
| TACCCTGAAAAATAAGCAAC+AGG | + | Chr8:731317-731336 | None:intergenic | 35.0% | |
| TAGGCTTGTATACTGTACTT+TGG | - | Chr8:732850-732869 | MsG0880041888.01.T01:intron | 35.0% | |
| TTAAACATAGCAGAGAAGAG+AGG | + | Chr8:732625-732644 | None:intergenic | 35.0% | |
| TTGTAATAGCAGCCTTTGTA+GGG | - | Chr8:731702-731721 | MsG0880041888.01.T01:intron | 35.0% | |
| TTTGTAATAGCAGCCTTTGT+AGG | - | Chr8:731701-731720 | MsG0880041888.01.T01:intron | 35.0% | |
| ! | CTTGGATGTCTTTGTCTTTT+AGG | - | Chr8:732013-732032 | MsG0880041888.01.T01:intron | 35.0% |
| ! | TATCATTGTCCCCACTATTT+TGG | + | Chr8:731867-731886 | None:intergenic | 35.0% |
| !! | CTCCTGTTGCTTATTTTTCA+GGG | - | Chr8:731312-731331 | MsG0880041888.01.T01:CDS | 35.0% |
| ACACCATAGCCATTATTGGA+AGG | + | Chr8:731178-731197 | None:intergenic | 40.0% | |
| ATCATCAGTGGCCTAATTAG+TGG | - | Chr8:732523-732542 | MsG0880041888.01.T01:CDS | 40.0% | |
| CAAAATGAGCCAAATTGACC+AGG | + | Chr8:732050-732069 | None:intergenic | 40.0% | |
| CAAATGTAACTGCTGGAACA+AGG | + | Chr8:731685-731704 | None:intergenic | 40.0% | |
| CTACCTTCCAATAATGGCTA+TGG | - | Chr8:731172-731191 | MsG0880041888.01.T01:CDS | 40.0% | |
| GAATGGTTGCAATAGCATGA+CGG | + | Chr8:731286-731305 | None:intergenic | 40.0% | |
| GGAAACTAACCCAATTAGTG+AGG | + | Chr8:731483-731502 | None:intergenic | 40.0% | |
| GGCTTGTATACTGTACTTTG+GGG | - | Chr8:732852-732871 | MsG0880041888.01.T01:intron | 40.0% | |
| GGTACACAACAAATACCCTA+GGG | + | Chr8:731265-731284 | None:intergenic | 40.0% | |
| TTGAATCAGACCTGAATGTG+TGG | - | Chr8:732395-732414 | MsG0880041888.01.T01:intron | 40.0% | |
| TTTCTTGACAGGAGAAACTC+TGG | - | Chr8:731413-731432 | MsG0880041888.01.T01:intron | 40.0% | |
| ! | CTTGCCATGATTGACTTTGA+AGG | + | Chr8:731962-731981 | None:intergenic | 40.0% |
| ! | GTTAGCTTGATTGGTGCAAT+TGG | - | Chr8:732819-732838 | MsG0880041888.01.T01:intron | 40.0% |
| ! | TGCTATCTTGTTGCTTCATG+AGG | - | Chr8:732675-732694 | MsG0880041888.01.T01:intron | 40.0% |
| !! | GCTCCTGTTGCTTATTTTTC+AGG | - | Chr8:731311-731330 | MsG0880041888.01.T01:CDS | 40.0% |
| !! | GTCAATTTGGCTCATTTTGC+AGG | - | Chr8:732051-732070 | MsG0880041888.01.T01:intron | 40.0% |
| !! | TCTTTGAAATGCACCAAGCT+TGG | + | Chr8:732597-732616 | None:intergenic | 40.0% |
| !! | TTTTAGGAAACTGTGTTGCC+TGG | - | Chr8:732029-732048 | MsG0880041888.01.T01:intron | 40.0% |
| ACTGTGTTGCCTGGTCAATT+TGG | - | Chr8:732038-732057 | MsG0880041888.01.T01:intron | 45.0% | |
| AGCAACAGGAGCAAGAAGAA+TGG | + | Chr8:731303-731322 | None:intergenic | 45.0% | |
| CGGTACACAACAAATACCCT+AGG | + | Chr8:731266-731285 | None:intergenic | 45.0% | |
| GGTGCAATTGGAGTGATCAT+AGG | - | Chr8:732831-732850 | MsG0880041888.01.T01:intron | 45.0% | |
| TGTAACTGCTGGAACAAGGT+TGG | + | Chr8:731681-731700 | None:intergenic | 45.0% | |
| ! | TTAGGATGGCTTGCATAAGC+TGG | + | Chr8:732307-732326 | None:intergenic | 45.0% |
| !! | GCTTGGTGCATTTCAAAGAG+AGG | - | Chr8:732598-732617 | MsG0880041888.01.T01:intron | 45.0% |
| CTTGCATAAGCTGGAACCTG+AGG | + | Chr8:732298-732317 | None:intergenic | 50.0% | |
| TGCTGGAACAAGGTTGGACA+TGG | + | Chr8:731675-731694 | None:intergenic | 50.0% | |
| TTTGCAGGGTTTGAGCCCTA+GGG | - | Chr8:731247-731266 | MsG0880041888.01.T01:CDS | 50.0% | |
| ! | TTTTGCAGGGTTTGAGCCCT+AGG | - | Chr8:731246-731265 | MsG0880041888.01.T01:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 731164 | 733031 | 731164 | ID=MsG0880041888.01;Name=MsG0880041888.01 |
| Chr8 | mRNA | 731164 | 733031 | 731164 | ID=MsG0880041888.01.T01;Parent=MsG0880041888.01;Name=MsG0880041888.01.T01;_AED=0.49;_eAED=0.49;_QI=0|0|0|1|1|1|7|0|373 |
| Chr8 | exon | 732862 | 733031 | 732862 | ID=MsG0880041888.01.T01:exon:117;Parent=MsG0880041888.01.T01 |
| Chr8 | exon | 732703 | 732771 | 732703 | ID=MsG0880041888.01.T01:exon:118;Parent=MsG0880041888.01.T01 |
| Chr8 | exon | 732472 | 732588 | 732472 | ID=MsG0880041888.01.T01:exon:119;Parent=MsG0880041888.01.T01 |
| Chr8 | exon | 732123 | 732369 | 732123 | ID=MsG0880041888.01.T01:exon:120;Parent=MsG0880041888.01.T01 |
| Chr8 | exon | 731736 | 731894 | 731736 | ID=MsG0880041888.01.T01:exon:121;Parent=MsG0880041888.01.T01 |
| Chr8 | exon | 731482 | 731633 | 731482 | ID=MsG0880041888.01.T01:exon:122;Parent=MsG0880041888.01.T01 |
| Chr8 | exon | 731164 | 731371 | 731164 | ID=MsG0880041888.01.T01:exon:123;Parent=MsG0880041888.01.T01 |
| Chr8 | CDS | 732862 | 733031 | 732862 | ID=MsG0880041888.01.T01:cds;Parent=MsG0880041888.01.T01 |
| Chr8 | CDS | 732703 | 732771 | 732703 | ID=MsG0880041888.01.T01:cds;Parent=MsG0880041888.01.T01 |
| Chr8 | CDS | 732472 | 732588 | 732472 | ID=MsG0880041888.01.T01:cds;Parent=MsG0880041888.01.T01 |
| Chr8 | CDS | 732123 | 732369 | 732123 | ID=MsG0880041888.01.T01:cds;Parent=MsG0880041888.01.T01 |
| Chr8 | CDS | 731736 | 731894 | 731736 | ID=MsG0880041888.01.T01:cds;Parent=MsG0880041888.01.T01 |
| Chr8 | CDS | 731482 | 731633 | 731482 | ID=MsG0880041888.01.T01:cds;Parent=MsG0880041888.01.T01 |
| Chr8 | CDS | 731164 | 731371 | 731164 | ID=MsG0880041888.01.T01:cds;Parent=MsG0880041888.01.T01 |
| Gene Sequence |
| Protein sequence |
