AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880041963.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880041963.01.T01 MTR_5g066400 47.328 131 19 2 10 138 299 381 5.06e-26 102
MsG0880041963.01.T01 MTR_8g464900 47.328 131 19 2 10 138 326 408 5.84e-26 102
MsG0880041963.01.T01 MTR_5g066400 47.328 131 19 2 10 138 327 409 5.92e-26 102
MsG0880041963.01.T01 MTR_5g066400 54.630 108 1 1 10 117 327 386 6.61e-25 99.4
MsG0880041963.01.T01 MTR_8g007440 50.442 113 8 1 10 122 209 273 3.02e-23 92.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880041963.01.T01 AT1G18450 41.221 131 27 2 10 138 323 405 1.50e-21 90.5

Find 59 sgRNAs with CRISPR-Local

Find 470 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCGCAATACCCTTGCTTTCC+AGG 0.219314 8:+1849560 None:intergenic
AATACGCCCTGGAGAGTTTC+AGG 0.253290 8:-1849416 MsG0880041963.01.T01:five_prime_UTR
GCATTTCACTTTCAGCTTGC+TGG 0.254209 8:-1845239 MsG0880041963.01.T01:CDS
TATCACAGGACAATTGAAAT+TGG 0.257174 8:-1847405 MsG0880041963.01.T01:intron
TGAGCTGACATTAAAGATTA+TGG 0.299953 8:-1847325 MsG0880041963.01.T01:exon
CAAGGTAAATTACTCGGATT+TGG 0.303844 8:+1842618 None:intergenic
ATTACGCTCTACATAGAAAC+TGG 0.316159 8:+1845684 None:intergenic
TGAAACCTCGGTATTCCTTT+AGG 0.316799 8:-1849447 MsG0880041963.01.T01:five_prime_UTR
ACAGAAGGAACAGAGATTAA+AGG 0.350087 8:+1845720 None:intergenic
GATGTAAATTGCAGTCAATT+CGG 0.365581 8:-1846198 MsG0880041963.01.T01:intron
ATGTAAATTGCAGTCAATTC+GGG 0.378530 8:-1846197 MsG0880041963.01.T01:intron
TTCAATTATCTTACCATTTG+AGG 0.388965 8:+1846131 None:intergenic
GGCAGTATATTGGCTTCCCT+TGG 0.405681 8:-1842664 MsG0880041963.01.T01:CDS
GATGGATTGAAAAGAACATC+TGG 0.409238 8:+1847363 None:intergenic
AGAATTATTTAGTAGCATAC+TGG 0.414090 8:-1845761 MsG0880041963.01.T01:CDS
TTTCAATCCATCCCTGGCTC+AGG 0.414421 8:-1847352 MsG0880041963.01.T01:five_prime_UTR
GCGTATTTCCTTTCTCCTAA+AGG 0.428130 8:+1849432 None:intergenic
TCGGTATTCCTTTAGGAGAA+AGG 0.431364 8:-1849440 MsG0880041963.01.T01:five_prime_UTR
TGTAGAAATTCTCCTCCAAT+TGG 0.431746 8:+1849600 None:intergenic
ATTTGGAGAACCACATTTGT+TGG 0.435174 8:+1842635 None:intergenic
CTGGATTGGAGGCAGTATAT+TGG 0.435714 8:-1842674 MsG0880041963.01.T01:CDS
CTTTCAGCTTGCTGGTGGTA+CGG 0.449113 8:-1845231 MsG0880041963.01.T01:CDS
TCTGCAACTTACTGGCCATC+AGG 0.458733 8:+1847592 None:intergenic
AGTTCGTGGGCTGCCTCAAA+TGG 0.472905 8:-1846144 MsG0880041963.01.T01:intron
TCAGCTCACAAACCTGAGCC+AGG 0.478987 8:+1847340 None:intergenic
GCTGTGGCAACGTCTCCAAT+TGG 0.487799 8:-1849615 MsG0880041963.01.T01:five_prime_UTR
ATTGGCAGTGTCTGGATTGG+AGG 0.490582 8:-1842685 MsG0880041963.01.T01:intron
AGATTGCTTGATGAAAAGCC+TGG 0.504029 8:-1849578 MsG0880041963.01.T01:five_prime_UTR
GTAGCTCATACGATGTCGTT+GGG 0.515121 8:+1847614 None:intergenic
TTTATTGGCAGTGTCTGGAT+TGG 0.519842 8:-1842688 MsG0880041963.01.T01:intron
CATAATACCTGAAACTCTCC+AGG 0.520117 8:+1849409 None:intergenic
AGGAGAAAGGAAATACGCCC+TGG 0.526266 8:-1849427 MsG0880041963.01.T01:five_prime_UTR
TTGGTTCCTTCCAACAAATG+TGG 0.534619 8:-1842645 MsG0880041963.01.T01:CDS
TGAGGCAGCCCACGAACTGA+TGG 0.537968 8:+1846149 None:intergenic
GATGAAAAGCCTGGAAAGCA+AGG 0.538696 8:-1849569 MsG0880041963.01.T01:five_prime_UTR
TTTCACTTTCAGCTTGCTGG+TGG 0.540017 8:-1845236 MsG0880041963.01.T01:CDS
GGAGAACCACATTTGTTGGA+AGG 0.543183 8:+1842639 None:intergenic
GGCTTCAATGCAACAACTGA+AGG 0.545651 8:-1845210 MsG0880041963.01.T01:CDS
GGTAGCTCATACGATGTCGT+TGG 0.549228 8:+1847613 None:intergenic
GAAATCGCTCCATCAGTTCG+TGG 0.564376 8:-1846158 MsG0880041963.01.T01:CDS
GCAATCAACTTTAAACGCAC+AGG 0.565525 8:+1845260 None:intergenic
TTTGATCAAGGTAAATTACT+CGG 0.566174 8:+1842612 None:intergenic
GTGGCAACGTCTCCAATTGG+AGG 0.567917 8:-1849612 MsG0880041963.01.T01:five_prime_UTR
ACATTTGTTGGAAGGAACCA+AGG 0.602188 8:+1842647 None:intergenic
AATTGCAGTCAATTCGGGCA+TGG 0.611621 8:-1846192 MsG0880041963.01.T01:intron
CCTGGAAAGCAAGGGTATTG+CGG 0.612507 8:-1849560 MsG0880041963.01.T01:intron
GGGTAGAGTATATGTACAGA+AGG 0.612705 8:+1845705 None:intergenic
AAATCGCTCCATCAGTTCGT+GGG 0.616076 8:-1846157 MsG0880041963.01.T01:CDS
ATGAAAAGCCTGGAAAGCAA+GGG 0.625341 8:-1849568 MsG0880041963.01.T01:five_prime_UTR
TCACAAACCTGAGCCAGGGA+TGG 0.628933 8:+1847345 None:intergenic
CCTCTAGCAAGTCTTTCTCA+AGG 0.629024 8:+1845183 None:intergenic
CAGCTCACAAACCTGAGCCA+GGG 0.634400 8:+1847341 None:intergenic
CATTTGTTGGAAGGAACCAA+GGG 0.639612 8:+1842648 None:intergenic
ACATCGTATGAGCTACCTGA+TGG 0.659142 8:-1847607 MsG0880041963.01.T01:five_prime_UTR
GCGTAATTATAAAATTAGCA+CGG 0.659501 8:-1845668 MsG0880041963.01.T01:CDS
TTACGCTCTACATAGAAACT+GGG 0.686045 8:+1845685 None:intergenic
TTTCTCCTAAAGGAATACCG+AGG 0.688869 8:+1849442 None:intergenic
ATAATACCTGAAACTCTCCA+GGG 0.701084 8:+1849410 None:intergenic
CCTTGAGAAAGACTTGCTAG+AGG 0.710122 8:-1845183 MsG0880041963.01.T01:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTATTTAAATTTAATTAAT+GGG - Chr8:1845445-1845464 MsG0880041963.01.T01:intron 0.0%
!! AAAAATTGAATAAAGATATT+GGG - Chr8:1848583-1848602 MsG0880041963.01.T01:intron 10.0%
!! TCTATAATAACAATATATAA+GGG + Chr8:1843923-1843942 None:intergenic 10.0%
!!! AATTTTTAATTGTTGTTTTA+AGG - Chr8:1847219-1847238 MsG0880041963.01.T01:intron 10.0%
!!! ATATATATTTTTTATATCAC+AGG - Chr8:1844850-1844869 MsG0880041963.01.T01:intron 10.0%
!!! GTTTTTTTAATTCTATATAA+AGG + Chr8:1843974-1843993 None:intergenic 10.0%
!!! TTGATTTTGATTAAAATTAT+AGG - Chr8:1843689-1843708 MsG0880041963.01.T01:intron 10.0%
!! AATAAAACATAGAAGTTATT+TGG - Chr8:1847888-1847907 MsG0880041963.01.T01:intron 15.0%
!! AGAAGAAAAAAAAAAAACAA+CGG - Chr8:1849168-1849187 MsG0880041963.01.T01:intron 15.0%
!! ATTACAATATATTAACACAT+TGG - Chr8:1848619-1848638 MsG0880041963.01.T01:intron 15.0%
!! CAAAAATTGAATAAAGATAT+TGG - Chr8:1848582-1848601 MsG0880041963.01.T01:intron 15.0%
!! CTATAATAACAATATATAAG+GGG + Chr8:1843922-1843941 None:intergenic 15.0%
!! CTCTATAATAACAATATATA+AGG + Chr8:1843924-1843943 None:intergenic 15.0%
!! GTATTATTACAATATAATCA+GGG - Chr8:1848642-1848661 MsG0880041963.01.T01:intron 15.0%
!! TAAGATAATTTAAGAGATAA+TGG - Chr8:1843223-1843242 MsG0880041963.01.T01:intron 15.0%
!! TATTATTACAATATAATCAG+GGG - Chr8:1848643-1848662 MsG0880041963.01.T01:intron 15.0%
!! TTAAAACAAATTTACTAAGT+AGG + Chr8:1849091-1849110 None:intergenic 15.0%
!! TTACAATATATTAACACATT+GGG - Chr8:1848620-1848639 MsG0880041963.01.T01:intron 15.0%
!!! AAATTTTCAATAAAAATGGA+TGG + Chr8:1846740-1846759 None:intergenic 15.0%
!!! ACAATTATTAATTTTATGTG+GGG - Chr8:1849508-1849527 MsG0880041963.01.T01:intron 15.0%
!!! ATCCATTTTTATTGAAAATT+TGG - Chr8:1846739-1846758 MsG0880041963.01.T01:intron 15.0%
!!! CACAATTATTAATTTTATGT+GGG - Chr8:1849507-1849526 MsG0880041963.01.T01:intron 15.0%
!!! TCACAATTATTAATTTTATG+TGG - Chr8:1849506-1849525 MsG0880041963.01.T01:intron 15.0%
!!! TCTTATGGTTATAATTTTTT+TGG - Chr8:1843356-1843375 MsG0880041963.01.T01:intron 15.0%
!!! TTTTCTATTTCATCTTTATT+TGG + Chr8:1845035-1845054 None:intergenic 15.0%
!!! TTTTTCAAAAGGAAAAAAAA+AGG - Chr8:1848490-1848509 MsG0880041963.01.T01:intron 15.0%
!!! TTTTTTTTTCCTTTTGAAAA+AGG + Chr8:1848491-1848510 None:intergenic 15.0%
!! AAAAAAAAAAAGGAAATCTC+AGG + Chr8:1842794-1842813 None:intergenic 20.0%
!! AAAAAAAAAAGGAAATCTCA+GGG + Chr8:1842793-1842812 None:intergenic 20.0%
!! AAAACCAAAATCATATTCAA+AGG + Chr8:1844063-1844082 None:intergenic 20.0%
!! AAGATAAAATTGTAATTAGC+TGG - Chr8:1843485-1843504 MsG0880041963.01.T01:intron 20.0%
!! AATAAAGTTAAAAACGACTT+GGG + Chr8:1847447-1847466 None:intergenic 20.0%
!! ATAAAGGTAATAACAGATAT+GGG + Chr8:1843958-1843977 None:intergenic 20.0%
!! CATCTGTACAAAAAAAAAAA+AGG + Chr8:1842804-1842823 None:intergenic 20.0%
!! GGTATTATTACAATATAATC+AGG - Chr8:1848641-1848660 MsG0880041963.01.T01:intron 20.0%
!! TAATAAAGTTAAAAACGACT+TGG + Chr8:1847448-1847467 None:intergenic 20.0%
!! TATAAAGGTAATAACAGATA+TGG + Chr8:1843959-1843978 None:intergenic 20.0%
!! TCCAATTGAAATTTCTTATA+TGG - Chr8:1843047-1843066 MsG0880041963.01.T01:intron 20.0%
!! TCCATATAAGAAATTTCAAT+TGG + Chr8:1843051-1843070 None:intergenic 20.0%
!! TCTTAAATATCTTCAGAAAA+TGG + Chr8:1843208-1843227 None:intergenic 20.0%
!! TGCATGTAAATTATAATAAG+TGG - Chr8:1843632-1843651 MsG0880041963.01.T01:intron 20.0%
!!! AAATCCTTTGAATATGATTT+TGG - Chr8:1844056-1844075 MsG0880041963.01.T01:intron 20.0%
!!! AAGGTTAACATTTTTTCAAA+TGG - Chr8:1847253-1847272 MsG0880041963.01.T01:intron 20.0%
!!! AATTGTTTTTCAATCTAAGA+AGG - Chr8:1847500-1847519 MsG0880041963.01.T01:intron 20.0%
!!! ACAAACTCTCAATTAATTTT+AGG + Chr8:1843854-1843873 None:intergenic 20.0%
!!! ACATATTTTGATTCACAATT+AGG + Chr8:1845631-1845650 None:intergenic 20.0%
!!! ATATTTGTCTGTTTTGTTTT+AGG + Chr8:1845245-1845264 None:intergenic 20.0%
!!! ATATTTGTTGGTTGAATTTA+TGG + Chr8:1846888-1846907 None:intergenic 20.0%
!!! ATATTTTGATTCACAATTAG+GGG + Chr8:1845629-1845648 None:intergenic 20.0%
!!! ATCCATTTTTCTTCTTTATT+TGG - Chr8:1844611-1844630 MsG0880041963.01.T01:intron 20.0%
!!! CAAACTCTCAATTAATTTTA+GGG + Chr8:1843853-1843872 None:intergenic 20.0%
!!! CATATTTTGATTCACAATTA+GGG + Chr8:1845630-1845649 None:intergenic 20.0%
!!! CTCCAAATTTTCAATAAAAA+TGG + Chr8:1846744-1846763 None:intergenic 20.0%
!!! TATCATATTTGTTTTCTTGT+CGG + Chr8:1843771-1843790 None:intergenic 20.0%
!!! TATTTGTCTGTTTTGTTTTA+GGG + Chr8:1845244-1845263 None:intergenic 20.0%
!!! TATTTGTTGGTTGAATTTAT+GGG + Chr8:1846887-1846906 None:intergenic 20.0%
!!! TGAAACTCATTTTTTTATTG+TGG - Chr8:1846819-1846838 MsG0880041963.01.T01:intron 20.0%
!!! TGATATTATTGTTTCTGTTT+GGG - Chr8:1846394-1846413 MsG0880041963.01.T01:intron 20.0%
!!! TTTTAATTGTTGTTTTAAGG+TGG - Chr8:1847222-1847241 MsG0880041963.01.T01:intron 20.0%
!!! TTTTATTGAGATAATTCACT+AGG + Chr8:1847875-1847894 None:intergenic 20.0%
! AAAACGCAAATATATATGTC+AGG + Chr8:1845717-1845736 None:intergenic 25.0%
! AATTGAGCTAAATAGTAAGT+AGG - Chr8:1843143-1843162 MsG0880041963.01.T01:intron 25.0%
! ACATTATTAAATGTGCTCAA+AGG + Chr8:1847825-1847844 None:intergenic 25.0%
! ACTAAATTTCATTTCTGATC+AGG - Chr8:1848716-1848735 MsG0880041963.01.T01:intron 25.0%
! ACTTATGAAGTTTATGGAAA+CGG + Chr8:1847560-1847579 None:intergenic 25.0%
! ACTTCGATATTTGATATCAT+AGG - Chr8:1845348-1845367 MsG0880041963.01.T01:intron 25.0%
! AGAATTATTTAGTAGCATAC+TGG - Chr8:1846508-1846527 MsG0880041963.01.T01:intron 25.0%
! AGAGTGAATAATATAAGCAA+GGG + Chr8:1847130-1847149 None:intergenic 25.0%
! AGCGAAATAATTAGAAAAGT+AGG + Chr8:1843610-1843629 None:intergenic 25.0%
! ATAAACAAGAAGCAATAATC+AGG + Chr8:1844800-1844819 None:intergenic 25.0%
! ATAAATCAAGATGCAAGTAT+TGG - Chr8:1845773-1845792 MsG0880041963.01.T01:CDS 25.0%
! ATATATATGGAACATTTGGA+AGG + Chr8:1847638-1847657 None:intergenic 25.0%
! ATGAAAAGAATCACACATAT+AGG + Chr8:1845877-1845896 None:intergenic 25.0%
! ATGTATTATCAGATTGGATT+TGG - Chr8:1845551-1845570 MsG0880041963.01.T01:intron 25.0%
! CAAAGAAAAAAACAGTTACT+AGG + Chr8:1842903-1842922 None:intergenic 25.0%
! CCAAATATATATGGAACATT+TGG + Chr8:1847642-1847661 None:intergenic 25.0%
! CCAAATGTTCCATATATATT+TGG - Chr8:1847639-1847658 MsG0880041963.01.T01:intron 25.0%
! GGATGTCATATAAATTCTAT+TGG + Chr8:1844595-1844614 None:intergenic 25.0%
! GTAAGAGAAGATATTCAAAT+TGG - Chr8:1848549-1848568 MsG0880041963.01.T01:intron 25.0%
! TATATATGGAACATTTGGAA+GGG + Chr8:1847637-1847656 None:intergenic 25.0%
! TGCCAAATAAAGAAGAAAAA+TGG + Chr8:1844616-1844635 None:intergenic 25.0%
! TTCAATTATCTTACCATTTG+AGG + Chr8:1846141-1846160 None:intergenic 25.0%
! TTGAAAATTTGGAGATATTG+TGG - Chr8:1846750-1846769 MsG0880041963.01.T01:intron 25.0%
!! AATTAGCTGGTTTAAAAGAA+GGG - Chr8:1843498-1843517 MsG0880041963.01.T01:intron 25.0%
!! ATATGTCAGGTTTTACTATA+TGG + Chr8:1845704-1845723 None:intergenic 25.0%
!! ATTTGCCAATCCAAAATTTT+CGG - Chr8:1845511-1845530 MsG0880041963.01.T01:intron 25.0%
!! GTGTTTGTTTAAAGTATCTA+AGG - Chr8:1846162-1846181 MsG0880041963.01.T01:CDS 25.0%
!! GTTTTGTAAGGTGAAATATT+GGG - Chr8:1848368-1848387 MsG0880041963.01.T01:intron 25.0%
!! TAATTAGCTGGTTTAAAAGA+AGG - Chr8:1843497-1843516 MsG0880041963.01.T01:intron 25.0%
!! TATTCAAAGGATTTTCACAA+TGG + Chr8:1844050-1844069 None:intergenic 25.0%
!! TGTACTATTGATTGAAAACA+AGG - Chr8:1845057-1845076 MsG0880041963.01.T01:intron 25.0%
!! TGTTTTGTAAGGTGAAATAT+TGG - Chr8:1848367-1848386 MsG0880041963.01.T01:intron 25.0%
!!! ACTCATTTTTTTATTGTGGT+TGG - Chr8:1846823-1846842 MsG0880041963.01.T01:intron 25.0%
!!! ATAAGAGCATACATGATTTT+GGG + Chr8:1843548-1843567 None:intergenic 25.0%
!!! ATTTTTCTTCTTTATTTGGC+AGG - Chr8:1844615-1844634 MsG0880041963.01.T01:intron 25.0%
!!! CAAACTTTTTCCTTTTTTCA+GGG + Chr8:1845805-1845824 None:intergenic 25.0%
!!! CTTGTTCTCAAAATTTGTTT+TGG + Chr8:1849245-1849264 None:intergenic 25.0%
!!! GATATTATTGTTTCTGTTTG+GGG - Chr8:1846395-1846414 MsG0880041963.01.T01:intron 25.0%
!!! GCTGTTTAAAATGTTTTGTA+AGG - Chr8:1848356-1848375 MsG0880041963.01.T01:intron 25.0%
!!! GTGATATTATTGTTTCTGTT+TGG - Chr8:1846393-1846412 MsG0880041963.01.T01:intron 25.0%
!!! TATAAGAGCATACATGATTT+TGG + Chr8:1843549-1843568 None:intergenic 25.0%
!!! TTAGTATTTTAAACTTCGCA+GGG - Chr8:1844979-1844998 MsG0880041963.01.T01:intron 25.0%
!!! TTTAGTATTTTAAACTTCGC+AGG - Chr8:1844978-1844997 MsG0880041963.01.T01:intron 25.0%
AAATATCACTTCAACATGTG+TGG - Chr8:1845259-1845278 MsG0880041963.01.T01:CDS 30.0%
AAATCTCAATTTGACAACCA+TGG + Chr8:1845582-1845601 None:intergenic 30.0%
AAATTCTATTGGAGTTGAGA+GGG + Chr8:1844584-1844603 None:intergenic 30.0%
AAATTTGGAGATATTGTGGA+TGG - Chr8:1846754-1846773 MsG0880041963.01.T01:intron 30.0%
ACAATGGATAAGTGAACAAA+GGG + Chr8:1844034-1844053 None:intergenic 30.0%
ACAGTCATGTATTATCAGAT+TGG - Chr8:1845545-1845564 MsG0880041963.01.T01:intron 30.0%
ACATACTATTCGATACAACA+TGG + Chr8:1846958-1846977 None:intergenic 30.0%
ACATTAAATGAGATGAGAAC+AGG + Chr8:1844339-1844358 None:intergenic 30.0%
ACCAGACAACAAAATCTAAA+TGG + Chr8:1849374-1849393 None:intergenic 30.0%
ACCATATGATGTACATATAC+AGG - Chr8:1846916-1846935 MsG0880041963.01.T01:intron 30.0%
ACCTGTATATGTACATCATA+TGG + Chr8:1846920-1846939 None:intergenic 30.0%
AGAACAAAAATAGACCAACT+AGG + Chr8:1847354-1847373 None:intergenic 30.0%
AGTGTAAACAAAAGCCATAA+AGG + Chr8:1847194-1847213 None:intergenic 30.0%
ATAGCCATCTTATATGTTGA+TGG + Chr8:1848906-1848925 None:intergenic 30.0%
ATCAACATATAAGATGGCTA+TGG - Chr8:1848905-1848924 MsG0880041963.01.T01:intron 30.0%
ATGTAAAAACAAATCAGCAC+AGG + Chr8:1846430-1846449 None:intergenic 30.0%
ATGTAAATTGCAGTCAATTC+GGG - Chr8:1846072-1846091 MsG0880041963.01.T01:intron 30.0%
ATTATCAGATTGGATTTGGA+AGG - Chr8:1845555-1845574 MsG0880041963.01.T01:intron 30.0%
CAGAGTGAATAATATAAGCA+AGG + Chr8:1847131-1847150 None:intergenic 30.0%
CAGTTAAATCCCATTATAGT+AGG + Chr8:1843430-1843449 None:intergenic 30.0%
CTAAAATTAAAGTGCAAGCA+TGG - Chr8:1846643-1846662 MsG0880041963.01.T01:intron 30.0%
CTACAATGCTTCTATCAAAA+TGG + Chr8:1846700-1846719 None:intergenic 30.0%
CTAGCTATTATATTTGTCAG+CGG - Chr8:1842745-1842764 MsG0880041963.01.T01:intron 30.0%
CTAGGAAAGAAACAAACAAA+AGG + Chr8:1847857-1847876 None:intergenic 30.0%
CTGTATGCTTAGTTATCTTA+TGG - Chr8:1843341-1843360 MsG0880041963.01.T01:intron 30.0%
CTTAGTTTATGAAGATGTGT+TGG + Chr8:1843024-1843043 None:intergenic 30.0%
CTTGCTCATAGAAATATTGA+GGG - Chr8:1844704-1844723 MsG0880041963.01.T01:intron 30.0%
CTTGCTTATATTATTCACTC+TGG - Chr8:1847129-1847148 MsG0880041963.01.T01:intron 30.0%
GATGTAAATTGCAGTCAATT+CGG - Chr8:1846071-1846090 MsG0880041963.01.T01:intron 30.0%
GATTGGCAAATCACAAAATA+AGG + Chr8:1845502-1845521 None:intergenic 30.0%
GCAATGGAATTTAAAAGCTT+AGG - Chr8:1847938-1847957 MsG0880041963.01.T01:intron 30.0%
GCTTCTATCAAAATGGTTAT+GGG + Chr8:1846693-1846712 None:intergenic 30.0%
GGCACATATACATAATATAC+AGG + Chr8:1843000-1843019 None:intergenic 30.0%
GTACTTCTTCCTACTATAAT+GGG - Chr8:1843418-1843437 MsG0880041963.01.T01:intron 30.0%
TAAAAACAAACCACATCACA+AGG + Chr8:1844440-1844459 None:intergenic 30.0%
TAAATTCTATTGGAGTTGAG+AGG + Chr8:1844585-1844604 None:intergenic 30.0%
TACATTCCTTGAATATTTGC+AGG - Chr8:1846445-1846464 MsG0880041963.01.T01:intron 30.0%
TATACATAATATACAGGAGC+TGG + Chr8:1842994-1843013 None:intergenic 30.0%
TATCAAAATGGTTATGGGAT+GGG + Chr8:1846688-1846707 None:intergenic 30.0%
TATCACAGGACAATTGAAAT+TGG - Chr8:1844864-1844883 MsG0880041963.01.T01:intron 30.0%
TATCCATAATCTATTGCGTA+AGG - Chr8:1844817-1844836 MsG0880041963.01.T01:intron 30.0%
TCTGAGAAGCCAAATATATA+TGG + Chr8:1847651-1847670 None:intergenic 30.0%
TCTTGCTCATAGAAATATTG+AGG - Chr8:1844703-1844722 MsG0880041963.01.T01:intron 30.0%
TGAAGATAAGTCTATGCTTA+TGG - Chr8:1847730-1847749 MsG0880041963.01.T01:intron 30.0%
TGAGCTGACATTAAAGATTA+TGG - Chr8:1844944-1844963 MsG0880041963.01.T01:intron 30.0%
TGATAATACATGACTGTGTT+AGG + Chr8:1845542-1845561 None:intergenic 30.0%
TGCTTCTATCAAAATGGTTA+TGG + Chr8:1846694-1846713 None:intergenic 30.0%
TGGTGATTTACTTGGTAAAA+AGG - Chr8:1847916-1847935 MsG0880041963.01.T01:intron 30.0%
TGGTTTCAGCAAATATTTGT+TGG + Chr8:1846900-1846919 None:intergenic 30.0%
TGTAAACCAGAGTAGTAAAT+GGG + Chr8:1848823-1848842 None:intergenic 30.0%
TGTACTTCTTCCTACTATAA+TGG - Chr8:1843417-1843436 MsG0880041963.01.T01:intron 30.0%
TGTTGTATCGAATAGTATGT+TGG - Chr8:1846958-1846977 MsG0880041963.01.T01:intron 30.0%
TTGCTCATAGAAATATTGAG+GGG - Chr8:1844705-1844724 MsG0880041963.01.T01:intron 30.0%
TTGGTTGAATTTATGGGTAT+AGG + Chr8:1846881-1846900 None:intergenic 30.0%
TTGTAAACCAGAGTAGTAAA+TGG + Chr8:1848824-1848843 None:intergenic 30.0%
TTGTAGCTTTCAGATGTATT+AGG + Chr8:1844164-1844183 None:intergenic 30.0%
TTTACTTGGTAAAAAGGCAA+TGG - Chr8:1847922-1847941 MsG0880041963.01.T01:intron 30.0%
! ACTTGTGATGGTGAATTTAT+TGG - Chr8:1849566-1849585 MsG0880041963.01.T01:five_prime_UTR 30.0%
! ATAGAAGTTATTTGGTGACA+TGG - Chr8:1847896-1847915 MsG0880041963.01.T01:intron 30.0%
! ATATATTTGGCTTCTCAGAA+AGG - Chr8:1847652-1847671 MsG0880041963.01.T01:intron 30.0%
! ATTTTCAGCCAAGTCTTTAT+AGG - Chr8:1844531-1844550 MsG0880041963.01.T01:intron 30.0%
! CAAGTTTGTTTCTCTTTGTA+TGG - Chr8:1848855-1848874 MsG0880041963.01.T01:intron 30.0%
! TAAACCCGAAAATTTTGGAT+TGG + Chr8:1845519-1845538 None:intergenic 30.0%
! TGTTTTCAAAAACAAGCAGA+AGG + Chr8:1844377-1844396 None:intergenic 30.0%
! TTAGGTAAACCCGAAAATTT+TGG + Chr8:1845524-1845543 None:intergenic 30.0%
! TTTCAATCTAAGAAGGTATG+AGG - Chr8:1847507-1847526 MsG0880041963.01.T01:intron 30.0%
! TTTGCCAATCCAAAATTTTC+GGG - Chr8:1845512-1845531 MsG0880041963.01.T01:intron 30.0%
! TTTTGCTTCCATTTCTTTCA+AGG - Chr8:1849452-1849471 MsG0880041963.01.T01:intron 30.0%
! TTTTTGTACAGATGAAACCT+CGG - Chr8:1842810-1842829 MsG0880041963.01.T01:intron 30.0%
!! AACTGTTTTCTAACTTGTGA+TGG - Chr8:1849554-1849573 MsG0880041963.01.T01:intron 30.0%
!! CATGCTTGCACTTTAATTTT+AGG + Chr8:1846645-1846664 None:intergenic 30.0%
!! GCAAACTTTTTCCTTTTTTC+AGG + Chr8:1845806-1845825 None:intergenic 30.0%
!! GTTTGTGTAATTTTGACCAA+AGG - Chr8:1843868-1843887 MsG0880041963.01.T01:intron 30.0%
!! TCCATTTAGATTTTGTTGTC+TGG - Chr8:1849370-1849389 MsG0880041963.01.T01:intron 30.0%
!!! AAGGGGATTCAAGTTTTTTT+TGG + Chr8:1843905-1843924 None:intergenic 30.0%
!!! ATCCCATACTCCATTTTTTT+TGG + Chr8:1842970-1842989 None:intergenic 30.0%
!!! CATTTTGATAGAAGCATTGT+AGG - Chr8:1846698-1846717 MsG0880041963.01.T01:intron 30.0%
!!! GATGTGGTTTGTTTTTACTT+GGG - Chr8:1844443-1844462 MsG0880041963.01.T01:intron 30.0%
!!! TCCCATACTCCATTTTTTTT+GGG + Chr8:1842969-1842988 None:intergenic 30.0%
!!! TCTACTATTTTTGCAACACA+AGG - Chr8:1842632-1842651 MsG0880041963.01.T01:CDS 30.0%
!!! TGATGTGGTTTGTTTTTACT+TGG - Chr8:1844442-1844461 MsG0880041963.01.T01:intron 30.0%
!!! TTAGTTTTTGGCTTTGAGTT+AGG + Chr8:1845109-1845128 None:intergenic 30.0%
!!! TTTTAAGGTGGTGATTTCAA+AGG - Chr8:1847234-1847253 MsG0880041963.01.T01:intron 30.0%
AATCTGGAAGCAATTTAGCA+AGG + Chr8:1845966-1845985 None:intergenic 35.0%
AATTCAATACCTAGGGTAGA+TGG - Chr8:1846246-1846265 MsG0880041963.01.T01:intron 35.0%
ACAGAAGGAACAGAGATTAA+AGG + Chr8:1846552-1846571 None:intergenic 35.0%
ACATCACAAACAAACATGCT+TGG + Chr8:1845385-1845404 None:intergenic 35.0%
ACCCCAAAAAAAATGGAGTA+TGG - Chr8:1842964-1842983 MsG0880041963.01.T01:intron 35.0%
ACCTTGCTTACTTACTTAAC+TGG - Chr8:1845474-1845493 MsG0880041963.01.T01:intron 35.0%
ACGCTCACTTATGAAGTTTA+TGG + Chr8:1847566-1847585 None:intergenic 35.0%
AGAAATGGAAGCAAAAGTAG+TGG + Chr8:1849448-1849467 None:intergenic 35.0%
AGTGCACAATTCAATACCTA+GGG - Chr8:1846239-1846258 MsG0880041963.01.T01:intron 35.0%
AGTTAAGCGTAGTAGAAAAG+TGG + Chr8:1843323-1843342 None:intergenic 35.0%
AGTTTATGAAGATGTGTTGG+AGG + Chr8:1843021-1843040 None:intergenic 35.0%
ATAAATGCAAGTCCTTCCAA+TGG + Chr8:1846297-1846316 None:intergenic 35.0%
ATAATACCTGAAACTCTCCA+GGG + Chr8:1842862-1842881 None:intergenic 35.0%
ATTACGCTCTACATAGAAAC+TGG + Chr8:1846588-1846607 None:intergenic 35.0%
ATTATCATCATGCCTAGCAA+AGG - Chr8:1845851-1845870 MsG0880041963.01.T01:intron 35.0%
ATTTGGAGAACCACATTTGT+TGG + Chr8:1849637-1849656 None:intergenic 35.0%
CAACCTTACGCAATAGATTA+TGG + Chr8:1844823-1844842 None:intergenic 35.0%
CAAGAATATCTGCAACTTAC+TGG + Chr8:1844688-1844707 None:intergenic 35.0%
CAAGGTAAATTACTCGGATT+TGG + Chr8:1849654-1849673 None:intergenic 35.0%
CACAATGGATAAGTGAACAA+AGG + Chr8:1844035-1844054 None:intergenic 35.0%
CACTGTGAAATCTGTTTGTT+TGG - Chr8:1846011-1846030 MsG0880041963.01.T01:intron 35.0%
CAGGTATACAAACCATCATA+TGG + Chr8:1844320-1844339 None:intergenic 35.0%
CCATCAAATAAACACACGAA+AGG + Chr8:1847759-1847778 None:intergenic 35.0%
CCCCAAAAAAAATGGAGTAT+GGG - Chr8:1842965-1842984 MsG0880041963.01.T01:intron 35.0%
CCTTTCGTGTGTTTATTTGA+TGG - Chr8:1847756-1847775 MsG0880041963.01.T01:intron 35.0%
CGATAACCTGCAAATATTCA+AGG + Chr8:1846454-1846473 None:intergenic 35.0%
CTATCAAAATGGTTATGGGA+TGG + Chr8:1846689-1846708 None:intergenic 35.0%
GAAACAGAAAGCTCTATTGT+TGG + Chr8:1843820-1843839 None:intergenic 35.0%
GATTTGACTCATGAACTGAA+AGG - Chr8:1845597-1845616 MsG0880041963.01.T01:intron 35.0%
GCATTTATATGGTCTGTCTT+AGG - Chr8:1846309-1846328 MsG0880041963.01.T01:intron 35.0%
GCATTTCGGTCATTTACTTT+GGG - Chr8:1848258-1848277 MsG0880041963.01.T01:intron 35.0%
GCATTTCGGTCATTTACTTT+GGG + Chr8:1848277-1848258 None:intergenic 35.0%
GCTAGAAAGCAACATTTATG+AGG - Chr8:1848937-1848956 MsG0880041963.01.T01:intron 35.0%
GGATATGTAGGGAAAGTTAT+AGG - Chr8:1846267-1846286 MsG0880041963.01.T01:intron 35.0%
GGCTATGAAATATGCATGAT+AGG + Chr8:1844779-1844798 None:intergenic 35.0%
GTATATGTAGTGTGTGAGAA+GGG + Chr8:1845157-1845176 None:intergenic 35.0%
TAGAGTATAAACCAGAGCAA+TGG - Chr8:1845316-1845335 MsG0880041963.01.T01:intron 35.0%
TAGTGCACAATTCAATACCT+AGG - Chr8:1846238-1846257 MsG0880041963.01.T01:intron 35.0%
TCCAGTTAAGTAAGTAAGCA+AGG + Chr8:1845478-1845497 None:intergenic 35.0%
TCCATTTCTTTCAAGGTCAA+GGG - Chr8:1849459-1849478 MsG0880041963.01.T01:intron 35.0%
TCTGCCATCAACATATAAGA+TGG - Chr8:1848899-1848918 MsG0880041963.01.T01:intron 35.0%
TCTGGCAATTTGTGATAGTT+CGG - Chr8:1847147-1847166 MsG0880041963.01.T01:intron 35.0%
TGATTCACAATTAGGGGAAA+AGG + Chr8:1845623-1845642 None:intergenic 35.0%
TGCTCATAGAAATATTGAGG+GGG - Chr8:1844706-1844725 MsG0880041963.01.T01:intron 35.0%
TGCTGGGTTAATTACCTTTA+TGG - Chr8:1847177-1847196 MsG0880041963.01.T01:intron 35.0%
TGGAAGGACTTGCATTTATA+TGG - Chr8:1846298-1846317 MsG0880041963.01.T01:intron 35.0%
TGTAGAAATTCTCCTCCAAT+TGG + Chr8:1842672-1842691 None:intergenic 35.0%
TTACGCTCTACATAGAAACT+GGG + Chr8:1846587-1846606 None:intergenic 35.0%
TTCCATTAGTACAGCTGAAT+GGG - Chr8:1847388-1847407 MsG0880041963.01.T01:five_prime_UTR 35.0%
TTCCATTTCTTTCAAGGTCA+AGG - Chr8:1849458-1849477 MsG0880041963.01.T01:intron 35.0%
TTGCTAAATTGCTTCCAGAT+TGG - Chr8:1845965-1845984 MsG0880041963.01.T01:intron 35.0%
TTTAATAGCCAAGAAGTCCT+GGG - Chr8:1849119-1849138 MsG0880041963.01.T01:intron 35.0%
TTTACATTGTAGCAGTGTAG+TGG + Chr8:1843111-1843130 None:intergenic 35.0%
! AAACCATCATATGGAGTATC+TGG + Chr8:1844311-1844330 None:intergenic 35.0%
! AACGTTTCGAGCTTTATGAA+GGG + Chr8:1848679-1848698 None:intergenic 35.0%
! AGGAAGAAGTACACTACAAT+AGG + Chr8:1843410-1843429 None:intergenic 35.0%
! ATTTTCAACTAGCGTCAAGA+CGG - Chr8:1843275-1843294 MsG0880041963.01.T01:intron 35.0%
! GCATTGTAACTTGTAAGTCT+TGG - Chr8:1847299-1847318 MsG0880041963.01.T01:intron 35.0%
! TAACGTTTCGAGCTTTATGA+AGG + Chr8:1848680-1848699 None:intergenic 35.0%
! TTTGTTGTCTGGTTAATGCT+AGG - Chr8:1849381-1849400 MsG0880041963.01.T01:intron 35.0%
! TTTTAATAGCCAAGAAGTCC+TGG - Chr8:1849118-1849137 MsG0880041963.01.T01:intron 35.0%
!! AACTTTTTCCTTGTGACAGA+GGG - Chr8:1844247-1844266 MsG0880041963.01.T01:intron 35.0%
!! GATGGATTGAAAAGAACATC+TGG + Chr8:1844909-1844928 None:intergenic 35.0%
!! TAACTTTTTCCTTGTGACAG+AGG - Chr8:1844246-1844265 MsG0880041963.01.T01:intron 35.0%
!!! AGTCTCTTACGGTTAGTTTT+TGG + Chr8:1845121-1845140 None:intergenic 35.0%
!!! ATACTCCATTTTTTTTGGGG+TGG + Chr8:1842965-1842984 None:intergenic 35.0%
!!! CCCATACTCCATTTTTTTTG+GGG + Chr8:1842968-1842987 None:intergenic 35.0%
!!! GCTAAAAAGTTTTGAACGCT+TGG + Chr8:1848330-1848349 None:intergenic 35.0%
!!! GGATTCAAGTTTTTTTTGGC+TGG + Chr8:1843901-1843920 None:intergenic 35.0%
!!! GGCTATTTGCCTTTTTCAAA+AGG - Chr8:1848479-1848498 MsG0880041963.01.T01:intron 35.0%
!!! TACTCCATTTTTTTTGGGGT+GGG + Chr8:1842964-1842983 None:intergenic 35.0%
!!! TCTATTTTTGTTCTGCTGAG+TGG - Chr8:1847360-1847379 MsG0880041963.01.T01:five_prime_UTR 35.0%
!!! TTTGGCTGGATTTTTTCCTT+TGG + Chr8:1843887-1843906 None:intergenic 35.0%
AATCCATTTGGGTAAAGAGC+AGG - Chr8:1848289-1848308 MsG0880041963.01.T01:intron 40.0%
AATCCATTTGGGTAAAGAGC+AGG + Chr8:1848308-1848289 None:intergenic 40.0%
AATCTAACATCCAGCCAATC+TGG + Chr8:1845982-1846001 None:intergenic 40.0%
AATCTGACAGACTGTAGACT+TGG - Chr8:1844134-1844153 MsG0880041963.01.T01:intron 40.0%
AGATTGCTTGATGAAAAGCC+TGG - Chr8:1842691-1842710 MsG0880041963.01.T01:intron 40.0%
ATCATGATCAATGACAGACC+TGG + Chr8:1844195-1844214 None:intergenic 40.0%
ATGAAAAGCCTGGAAAGCAA+GGG - Chr8:1842701-1842720 MsG0880041963.01.T01:intron 40.0%
ATGCTACTGAAAGGAGGTTT+AGG - Chr8:1848769-1848788 MsG0880041963.01.T01:intron 40.0%
ATGGAAGCAAAAGTAGTGGT+TGG + Chr8:1849444-1849463 None:intergenic 40.0%
ATTGTGGTTGGAATGCTTTG+AGG - Chr8:1846835-1846854 MsG0880041963.01.T01:intron 40.0%
ATTTGTGATAGTTCGGAGGT+TGG - Chr8:1847154-1847173 MsG0880041963.01.T01:intron 40.0%
CATAATACCTGAAACTCTCC+AGG + Chr8:1842863-1842882 None:intergenic 40.0%
CATTTCTTTCAAGGTCAAGG+GGG - Chr8:1849461-1849480 MsG0880041963.01.T01:intron 40.0%
CCATTTCTTTCAAGGTCAAG+GGG - Chr8:1849460-1849479 MsG0880041963.01.T01:intron 40.0%
CGTAGTAGAAAAGTGGAAGA+CGG + Chr8:1843316-1843335 None:intergenic 40.0%
CTAGGGTAGATGGATATGTA+GGG - Chr8:1846256-1846275 MsG0880041963.01.T01:intron 40.0%
CTTCCATTAGTACAGCTGAA+TGG - Chr8:1847387-1847406 MsG0880041963.01.T01:five_prime_UTR 40.0%
GAAAGTTATAGGCCAACCAT+TGG - Chr8:1846278-1846297 MsG0880041963.01.T01:intron 40.0%
GCAATCAACTTTAAACGCAC+AGG + Chr8:1847012-1847031 None:intergenic 40.0%
GCGTATTTCCTTTCTCCTAA+AGG + Chr8:1842840-1842859 None:intergenic 40.0%
GGCATTTCGGTCATTTACTT+TGG - Chr8:1848257-1848276 MsG0880041963.01.T01:intron 40.0%
GGCATTTCGGTCATTTACTT+TGG + Chr8:1848276-1848257 None:intergenic 40.0%
GGGTAGAGTATATGTACAGA+AGG + Chr8:1846567-1846586 None:intergenic 40.0%
GGTATATGTAGTGTGTGAGA+AGG + Chr8:1845158-1845177 None:intergenic 40.0%
GGTGATTGCTAGTGATATCA+AGG - Chr8:1844268-1844287 MsG0880041963.01.T01:intron 40.0%
GTGAATTTATTGGCAGTGTC+TGG - Chr8:1849576-1849595 MsG0880041963.01.T01:five_prime_UTR 40.0%
TAAATTGCTTCCAGATTGGC+TGG - Chr8:1845969-1845988 MsG0880041963.01.T01:intron 40.0%
TATCTAAGGACCCAGATAGT+GGG - Chr8:1846176-1846195 MsG0880041963.01.T01:CDS 40.0%
TCACAATTTCGCTACTTGCA+CGG - Chr8:1849313-1849332 MsG0880041963.01.T01:intron 40.0%
TCCATTAGTACAGCTGAATG+GGG - Chr8:1847389-1847408 MsG0880041963.01.T01:five_prime_UTR 40.0%
TGAAACCTCGGTATTCCTTT+AGG - Chr8:1842822-1842841 MsG0880041963.01.T01:intron 40.0%
TGGAAGCAAAAGTAGTGGTT+GGG + Chr8:1849443-1849462 None:intergenic 40.0%
TGGTGACATGGTGATTTACT+TGG - Chr8:1847908-1847927 MsG0880041963.01.T01:intron 40.0%
TTCGTACACAGATGAATGCA+TGG + Chr8:1842930-1842949 None:intergenic 40.0%
TTGGTTCAGTCCCTGAAAAA+AGG - Chr8:1845792-1845811 MsG0880041963.01.T01:CDS 40.0%
TTGGTTCCTTCCAACAAATG+TGG - Chr8:1849624-1849643 MsG0880041963.01.T01:five_prime_UTR 40.0%
TTTATTGGCAGTGTCTGGAT+TGG - Chr8:1849581-1849600 MsG0880041963.01.T01:five_prime_UTR 40.0%
TTTCTCCTAAAGGAATACCG+AGG + Chr8:1842830-1842849 None:intergenic 40.0%
! ACATTTGTTGGAAGGAACCA+AGG + Chr8:1849625-1849644 None:intergenic 40.0%
! ATTTTTGCAACACAAGGCTG+TGG - Chr8:1842638-1842657 MsG0880041963.01.T01:CDS 40.0%
! CATTTGTTGGAAGGAACCAA+GGG + Chr8:1849624-1849643 None:intergenic 40.0%
! CTTTTGCCCATTTACTACTC+TGG - Chr8:1848814-1848833 MsG0880041963.01.T01:intron 40.0%
! TCGGTATTCCTTTAGGAGAA+AGG - Chr8:1842829-1842848 MsG0880041963.01.T01:intron 40.0%
! TGGCTGGATGTTAGATTTTG+AGG - Chr8:1845985-1846004 MsG0880041963.01.T01:intron 40.0%
! TGGCTTCTCAGAAAGGTTTT+TGG - Chr8:1847659-1847678 MsG0880041963.01.T01:intron 40.0%
! TGTTCTTTTCAATCCATCCC+TGG - Chr8:1844911-1844930 MsG0880041963.01.T01:intron 40.0%
! TTTTCAACTAGCGTCAAGAC+GGG - Chr8:1843276-1843295 MsG0880041963.01.T01:intron 40.0%
!! AAGAGCATCTTCTAGACTTC+TGG + Chr8:1844561-1844580 None:intergenic 40.0%
!! AGCGCAACTTAAGTTGAGTA+GGG + Chr8:1848048-1848067 None:intergenic 40.0%
!! GAGCATACATGATTTTGGGT+TGG + Chr8:1843544-1843563 None:intergenic 40.0%
!! GGTCTTCAATTTTTCAGAGC+AGG + Chr8:1849224-1849243 None:intergenic 40.0%
!! GTTTTGAACGCTTGGTGAAA+GGG + Chr8:1848322-1848341 None:intergenic 40.0%
!! TAAGTTGAGTAGGGGCATTT+CGG + Chr8:1848039-1848058 None:intergenic 40.0%
!! TAGCGCAACTTAAGTTGAGT+AGG + Chr8:1848049-1848068 None:intergenic 40.0%
!! TTTTGAACGCTTGGTGAAAG+GGG + Chr8:1848321-1848340 None:intergenic 40.0%
!!! ACTCCATTTTTTTTGGGGTG+GGG + Chr8:1842963-1842982 None:intergenic 40.0%
!!! AGTTTTGAACGCTTGGTGAA+AGG + Chr8:1848323-1848342 None:intergenic 40.0%
!!! GTTTTGTTTTAGGGTCCGTT+TGG + Chr8:1845235-1845254 None:intergenic 40.0%
AAACCAGAGCAATGGAGTGA+TGG - Chr8:1845324-1845343 MsG0880041963.01.T01:intron 45.0%
AAAGCTACAAGCTCTACTCC+AGG - Chr8:1844174-1844193 MsG0880041963.01.T01:intron 45.0%
AAATCGCTCCATCAGTTCGT+GGG - Chr8:1846112-1846131 MsG0880041963.01.T01:intron 45.0%
AAGCAATTTAGCAAGGCGCA+GGG + Chr8:1845959-1845978 None:intergenic 45.0%
AATTGCAGTCAATTCGGGCA+TGG - Chr8:1846077-1846096 MsG0880041963.01.T01:intron 45.0%
ACATCGTATGAGCTACCTGA+TGG - Chr8:1844662-1844681 MsG0880041963.01.T01:intron 45.0%
ACTTGGGTCTATGTGCTTTG+TGG - Chr8:1844459-1844478 MsG0880041963.01.T01:intron 45.0%
ACTTTCTGTCTCAGCCTAGT+TGG - Chr8:1847337-1847356 MsG0880041963.01.T01:five_prime_UTR 45.0%
AGAGGAATGGCAGGTTAGTA+GGG + Chr8:1845208-1845227 None:intergenic 45.0%
AGTCCTGCTCTTTACCCAAA+TGG - Chr8:1847988-1848007 MsG0880041963.01.T01:intron 45.0%
AGTCCTGCTCTTTACCCAAA+TGG + Chr8:1848007-1847988 None:intergenic 45.0%
AGTGGTTGGGGAAGAATGTA+GGG + Chr8:1849430-1849449 None:intergenic 45.0%
ATAGCCCATCGAAATTGGCA+CGG + Chr8:1848465-1848484 None:intergenic 45.0%
ATATATGCTAGCGCTCAGAC+AGG - Chr8:1843566-1843585 MsG0880041963.01.T01:intron 45.0%
ATCAAACCTGAGACCTTGAG+AGG + Chr8:1848431-1848450 None:intergenic 45.0%
ATGCAAGTCCTTCCAATGGT+TGG + Chr8:1846293-1846312 None:intergenic 45.0%
ATGTAGTGTGTGAGAAGGGA+AGG + Chr8:1845153-1845172 None:intergenic 45.0%
ATTTAGCTGACCTCACCTAG+CGG - Chr8:1846353-1846372 MsG0880041963.01.T01:intron 45.0%
CACAATTTCGCTACTTGCAC+GGG - Chr8:1849314-1849333 MsG0880041963.01.T01:intron 45.0%
CACACATATAGGCCTTTGCT+AGG + Chr8:1845866-1845885 None:intergenic 45.0%
CCAGTGGAAATGCTACTGAA+AGG - Chr8:1848760-1848779 MsG0880041963.01.T01:intron 45.0%
CCCCTTGACCTTGAAAGAAA+TGG + Chr8:1849463-1849482 None:intergenic 45.0%
CCTACATATCCATCTACCCT+AGG + Chr8:1846258-1846277 None:intergenic 45.0%
CCTAGCGGAAAAAGTTTCGA+TGG - Chr8:1846368-1846387 MsG0880041963.01.T01:intron 45.0%
CCTAGGGTAGATGGATATGT+AGG - Chr8:1846255-1846274 MsG0880041963.01.T01:intron 45.0%
CCTCTAGCAAGTCTTTCTCA+AGG + Chr8:1847089-1847108 None:intergenic 45.0%
CCTTTCAGTAGCATTTCCAC+TGG + Chr8:1848763-1848782 None:intergenic 45.0%
GATCTGTCATCCTTGTGATG+TGG - Chr8:1844427-1844446 MsG0880041963.01.T01:intron 45.0%
GATGAAAAGCCTGGAAAGCA+AGG - Chr8:1842700-1842719 MsG0880041963.01.T01:intron 45.0%
GATTGGATTTGGAAGGACCA+TGG - Chr8:1845562-1845581 MsG0880041963.01.T01:intron 45.0%
GCATTTCACTTTCAGCTTGC+TGG - Chr8:1847030-1847049 MsG0880041963.01.T01:intron 45.0%
GCTCCAGATACTCCATATGA+TGG - Chr8:1844305-1844324 MsG0880041963.01.T01:intron 45.0%
GGAAGCAAAAGTAGTGGTTG+GGG + Chr8:1849442-1849461 None:intergenic 45.0%
GGCAAATAGCCCATCGAAAT+TGG + Chr8:1848470-1848489 None:intergenic 45.0%
GGCAATTTGTGATAGTTCGG+AGG - Chr8:1847150-1847169 MsG0880041963.01.T01:intron 45.0%
GGCTTCAATGCAACAACTGA+AGG - Chr8:1847059-1847078 MsG0880041963.01.T01:intron 45.0%
GGGAATGAGCGAATCCATTT+GGG - Chr8:1848278-1848297 MsG0880041963.01.T01:intron 45.0%
GGGAATGAGCGAATCCATTT+GGG + Chr8:1848297-1848278 None:intergenic 45.0%
GGTAAAGAGCAGGACTCAAA+GGG + Chr8:1847984-1848003 None:intergenic 45.0%
GTAAAGAGCAGGACTCAAAG+GGG + Chr8:1847983-1848002 None:intergenic 45.0%
GTAGCTCATACGATGTCGTT+GGG + Chr8:1844658-1844677 None:intergenic 45.0%
GTATCTAAGGACCCAGATAG+TGG - Chr8:1846175-1846194 MsG0880041963.01.T01:CDS 45.0%
GTGGAAATGCTACTGAAAGG+AGG - Chr8:1848763-1848782 MsG0880041963.01.T01:intron 45.0%
GTTATAGGCCAACCATTGGA+AGG - Chr8:1846282-1846301 MsG0880041963.01.T01:intron 45.0%
TAGTGGTTGGGGAAGAATGT+AGG + Chr8:1849431-1849450 None:intergenic 45.0%
TATTGGGAACCCACTTGAGT+TGG - Chr8:1848384-1848403 MsG0880041963.01.T01:intron 45.0%
TCCCCATTCAGCTGTACTAA+TGG + Chr8:1847393-1847412 None:intergenic 45.0%
TGATCAGGCTGCTAGAGTAA+AGG - Chr8:1848731-1848750 MsG0880041963.01.T01:intron 45.0%
TGGGAATGAGCGAATCCATT+TGG - Chr8:1848277-1848296 MsG0880041963.01.T01:intron 45.0%
TGGGAATGAGCGAATCCATT+TGG + Chr8:1848296-1848277 None:intergenic 45.0%
TGTAGTGTGTGAGAAGGGAA+GGG + Chr8:1845152-1845171 None:intergenic 45.0%
! CAAGCCTTTTCCCACTATCT+GGG + Chr8:1846189-1846208 None:intergenic 45.0%
! CATATGGAGTATCTGGAGCA+CGG + Chr8:1844304-1844323 None:intergenic 45.0%
! CTGGATTGGAGGCAGTATAT+TGG - Chr8:1849595-1849614 MsG0880041963.01.T01:five_prime_UTR 45.0%
! GGAGAACCACATTTGTTGGA+AGG + Chr8:1849633-1849652 None:intergenic 45.0%
! GGCTGCTAGAGTAAAGGTAT+TGG - Chr8:1848737-1848756 MsG0880041963.01.T01:intron 45.0%
! TTTTTGTTCTGCTGAGTGGC+TGG - Chr8:1847364-1847383 MsG0880041963.01.T01:five_prime_UTR 45.0%
!! AGAGTAAAGGTATTGGCCAG+TGG - Chr8:1848744-1848763 MsG0880041963.01.T01:intron 45.0%
!! CCATCGAAACTTTTTCCGCT+AGG + Chr8:1846371-1846390 None:intergenic 45.0%
!! CCTTGAGAAAGACTTGCTAG+AGG - Chr8:1847086-1847105 MsG0880041963.01.T01:intron 45.0%
!! GAAACTTTTTCCGCTAGGTG+AGG + Chr8:1846366-1846385 None:intergenic 45.0%
!! GCGCAACTTAAGTTGAGTAG+GGG + Chr8:1848047-1848066 None:intergenic 45.0%
!! TAAGTTGCGTAGGGGCATTT+CGG - Chr8:1848244-1848263 MsG0880041963.01.T01:intron 45.0%
!! TTTCACTTTCAGCTTGCTGG+TGG - Chr8:1847033-1847052 MsG0880041963.01.T01:intron 45.0%
!!! ATTTTTTTTGGGGTGGGGTG+GGG + Chr8:1842958-1842977 None:intergenic 45.0%
!!! CATTTTTTTTGGGGTGGGGT+GGG + Chr8:1842959-1842978 None:intergenic 45.0%
!!! TGTTTTAGGGTCCGTTTGGT+TGG + Chr8:1845231-1845250 None:intergenic 45.0%
!! GTTTATTTAAATTTAATTAA+TGG - Chr8:1845444-1845463 MsG0880041963.01.T01:intron 5.0%
!!! CTAATAAAATAATTTTATAT+TGG - Chr8:1845409-1845428 MsG0880041963.01.T01:intron 5.0%
AATACGCCCTGGAGAGTTTC+AGG - Chr8:1842853-1842872 MsG0880041963.01.T01:intron 50.0%
AGCAATCACCCTCTGTCACA+AGG + Chr8:1844258-1844277 None:intergenic 50.0%
AGCAATTTAGCAAGGCGCAG+GGG + Chr8:1845958-1845977 None:intergenic 50.0%
AGGAGAAAGGAAATACGCCC+TGG - Chr8:1842842-1842861 MsG0880041963.01.T01:intron 50.0%
CCACCCCACCCCAAAAAAAA+TGG - Chr8:1842957-1842976 MsG0880041963.01.T01:intron 50.0%
CCATGCACTAAGTTGCGTAG+GGG - Chr8:1848236-1848255 MsG0880041963.01.T01:intron 50.0%
CGCTAGTGTATTCTGAGCTC+AGG - Chr8:1848204-1848223 MsG0880041963.01.T01:intron 50.0%
GAAATCGCTCCATCAGTTCG+TGG - Chr8:1846111-1846130 MsG0880041963.01.T01:intron 50.0%
GAAGCAATTTAGCAAGGCGC+AGG + Chr8:1845960-1845979 None:intergenic 50.0%
GAGAGGAATGGCAGGTTAGT+AGG + Chr8:1845209-1845228 None:intergenic 50.0%
GCCATGCACTAAGTTGCGTA+GGG - Chr8:1848235-1848254 MsG0880041963.01.T01:intron 50.0%
GCCATTCCTCTCCAACCAAA+CGG - Chr8:1845217-1845236 MsG0880041963.01.T01:CDS 50.0%
GGGATGTCGTCAGTCTCTTA+CGG + Chr8:1845132-1845151 None:intergenic 50.0%
GGGTAAAGAGCAGGACTCAA+AGG + Chr8:1847985-1848004 None:intergenic 50.0%
GGGTCTATGTGCTTTGTGGT+TGG - Chr8:1844463-1844482 MsG0880041963.01.T01:intron 50.0%
GGTAGCTCATACGATGTCGT+TGG + Chr8:1844659-1844678 None:intergenic 50.0%
GTACCATCACTCCATTGCTC+TGG + Chr8:1845330-1845349 None:intergenic 50.0%
GTGGTTGGGGAAGAATGTAG+GGG + Chr8:1849429-1849448 None:intergenic 50.0%
TAGCCCATCGAAATTGGCAC+GGG + Chr8:1848464-1848483 None:intergenic 50.0%
TCCGTTTGGTTGGAGAGGAA+TGG + Chr8:1845221-1845240 None:intergenic 50.0%
TCTGCAACTTACTGGCCATC+AGG + Chr8:1844680-1844699 None:intergenic 50.0%
TTTCAATCCATCCCTGGCTC+AGG - Chr8:1844917-1844936 MsG0880041963.01.T01:intron 50.0%
TTTGGTTGGAGAGGAATGGC+AGG + Chr8:1845217-1845236 None:intergenic 50.0%
! ATTGGCAGTGTCTGGATTGG+AGG - Chr8:1849584-1849603 MsG0880041963.01.T01:five_prime_UTR 50.0%
! CCAAGCCTTTTCCCACTATC+TGG + Chr8:1846190-1846209 None:intergenic 50.0%
! CTGGAGCGCCTATAAAGACT+TGG + Chr8:1844542-1844561 None:intergenic 50.0%
! TCGAGCTTTATGAAGGGCAC+AGG + Chr8:1848673-1848692 None:intergenic 50.0%
!! AGGACCCAGATAGTGGGAAA+AGG - Chr8:1846182-1846201 MsG0880041963.01.T01:CDS 50.0%
!! ATAGTTCGGAGGTTGGTGCT+GGG - Chr8:1847161-1847180 MsG0880041963.01.T01:intron 50.0%
!! CCAGATAGTGGGAAAAGGCT+TGG - Chr8:1846187-1846206 MsG0880041963.01.T01:CDS 50.0%
!! CCTGGAAAGCAAGGGTATTG+CGG - Chr8:1842709-1842728 MsG0880041963.01.T01:intron 50.0%
!! CTTTCAGCTTGCTGGTGGTA+CGG - Chr8:1847038-1847057 MsG0880041963.01.T01:intron 50.0%
!! GAAAGCAAGGGTATTGCGGT+GGG - Chr8:1842713-1842732 MsG0880041963.01.T01:intron 50.0%
!! GGCAGTATATTGGCTTCCCT+TGG - Chr8:1849605-1849624 MsG0880041963.01.T01:five_prime_UTR 50.0%
!!! CCATTTTTTTTGGGGTGGGG+TGG + Chr8:1842960-1842979 None:intergenic 50.0%
!!! TTTTTTTTGGGGTGGGGTGG+GGG + Chr8:1842957-1842976 None:intergenic 50.0%
AATGGATGGCCTGCAGCATG+AGG + Chr8:1846726-1846745 None:intergenic 55.0%
AGCCCATCGAAATTGGCACG+GGG + Chr8:1848463-1848482 None:intergenic 55.0%
ATGGCAGGTTAGTAGGGCGA+TGG + Chr8:1845202-1845221 None:intergenic 55.0%
CAGCTCACAAACCTGAGCCA+GGG + Chr8:1844931-1844950 None:intergenic 55.0%
CCCCTACGCAACTTAGTGCA+TGG + Chr8:1848239-1848258 None:intergenic 55.0%
CCGCAATACCCTTGCTTTCC+AGG + Chr8:1842712-1842731 None:intergenic 55.0%
CGCCATGCACTAAGTTGCGT+AGG - Chr8:1848234-1848253 MsG0880041963.01.T01:intron 55.0%
GCAATTTAGCAAGGCGCAGG+GGG + Chr8:1845957-1845976 None:intergenic 55.0%
GCTGTGGCAACGTCTCCAAT+TGG - Chr8:1842654-1842673 MsG0880041963.01.T01:CDS 55.0%
GGGAGGAAACATGTGAGTGG+GGG + Chr8:1845179-1845198 None:intergenic 55.0%
GGGGAGGAAACATGTGAGTG+GGG + Chr8:1845180-1845199 None:intergenic 55.0%
GGGGGAGGAAACATGTGAGT+GGG + Chr8:1845181-1845200 None:intergenic 55.0%
GTGGCAACGTCTCCAATTGG+AGG - Chr8:1842657-1842676 MsG0880041963.01.T01:CDS 55.0%
TAGGGTCCGTTTGGTTGGAG+AGG + Chr8:1845226-1845245 None:intergenic 55.0%
TCACAAACCTGAGCCAGGGA+TGG + Chr8:1844927-1844946 None:intergenic 55.0%
TCACAACATCTGCACTGCCC+AGG + Chr8:1849139-1849158 None:intergenic 55.0%
TCAGCTCACAAACCTGAGCC+AGG + Chr8:1844932-1844951 None:intergenic 55.0%
TGGCAGGTTAGTAGGGCGAT+GGG + Chr8:1845201-1845220 None:intergenic 55.0%
TGGGGGAGGAAACATGTGAG+TGG + Chr8:1845182-1845201 None:intergenic 55.0%
TTGTAGGAGCCTCATGCTGC+AGG - Chr8:1846714-1846733 MsG0880041963.01.T01:intron 55.0%
! AGTTCGTGGGCTGCCTCAAA+TGG - Chr8:1846125-1846144 MsG0880041963.01.T01:intron 55.0%
! TGAACGCTTGGTGAAAGGGG+AGG + Chr8:1848318-1848337 None:intergenic 55.0%
!! GAACCCACTTGAGTTGGCCT+GGG - Chr8:1848390-1848409 MsG0880041963.01.T01:intron 55.0%
!! GATAGTTCGGAGGTTGGTGC+TGG - Chr8:1847160-1847179 MsG0880041963.01.T01:intron 55.0%
!! GGAAAGCAAGGGTATTGCGG+TGG - Chr8:1842712-1842731 MsG0880041963.01.T01:intron 55.0%
AGGTCCCAGGCCAACTCAAG+TGG + Chr8:1848397-1848416 None:intergenic 60.0%
CCCATCGAAATTGGCACGGG+GGG + Chr8:1848461-1848480 None:intergenic 60.0%
CCCCCCGTGCCAATTTCGAT+GGG - Chr8:1848458-1848477 MsG0880041963.01.T01:intron 60.0%
CTGCACTGCCCAGGACTTCT+TGG + Chr8:1849130-1849149 None:intergenic 60.0%
CTTGGAGTGCGCTCCTCTCA+AGG - Chr8:1848415-1848434 MsG0880041963.01.T01:intron 60.0%
GCAGGTTAGTAGGGCGATGG+GGG + Chr8:1845199-1845218 None:intergenic 60.0%
GCCCATCGAAATTGGCACGG+GGG + Chr8:1848462-1848481 None:intergenic 60.0%
GGCAGGTTAGTAGGGCGATG+GGG + Chr8:1845200-1845219 None:intergenic 60.0%
GGTCCCAGGCCAACTCAAGT+GGG + Chr8:1848396-1848415 None:intergenic 60.0%
GTGGAAGACGGCACTGCACT+TGG + Chr8:1843304-1843323 None:intergenic 60.0%
TCCCCCCGTGCCAATTTCGA+TGG - Chr8:1848457-1848476 MsG0880041963.01.T01:intron 60.0%
TCGAAATTGGCACGGGGGGA+CGG + Chr8:1848457-1848476 None:intergenic 60.0%
TCGCTACTTGCACGGGACAC+TGG - Chr8:1849321-1849340 MsG0880041963.01.T01:intron 60.0%
TGAGGCAGCCCACGAACTGA+TGG + Chr8:1846123-1846142 None:intergenic 60.0%
TGCGCTCCTCTCAAGGTCTC+AGG - Chr8:1848422-1848441 MsG0880041963.01.T01:intron 60.0%
! CTTGAGAGGAGCGCACTCCA+AGG + Chr8:1848417-1848436 None:intergenic 60.0%
!! CTTGAGTTGGCCTGGGACCT+TGG - Chr8:1848397-1848416 MsG0880041963.01.T01:intron 60.0%
!! GGAACCCACTTGAGTTGGCC+TGG - Chr8:1848389-1848408 MsG0880041963.01.T01:intron 60.0%
AAATTGGCACGGGGGGACGG+GGG + Chr8:1848454-1848473 None:intergenic 65.0%
CGAAATTGGCACGGGGGGAC+GGG + Chr8:1848456-1848475 None:intergenic 65.0%
GAAATTGGCACGGGGGGACG+GGG + Chr8:1848455-1848474 None:intergenic 65.0%
GGTTAGTAGGGCGATGGGGG+AGG + Chr8:1845196-1845215 None:intergenic 65.0%
GGAGCGCACTCCAAGGTCCC+AGG + Chr8:1848410-1848429 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr8 gene 1842617 1849674 1842617 ID=MsG0880041963.01;Name=MsG0880041963.01
Chr8 mRNA 1842617 1849674 1842617 ID=MsG0880041963.01.T01;Parent=MsG0880041963.01;Name=MsG0880041963.01.T01;_AED=0.57;_eAED=0.58;_QI=339|0.37|0.22|0.88|0.25|0.33|9|0|167
Chr8 exon 1849561 1849674 1849561 ID=MsG0880041963.01.T01:exon:1196;Parent=MsG0880041963.01.T01
Chr8 exon 1849388 1849470 1849388 ID=MsG0880041963.01.T01:exon:1195;Parent=MsG0880041963.01.T01
Chr8 exon 1847604 1847654 1847604 ID=MsG0880041963.01.T01:exon:1194;Parent=MsG0880041963.01.T01
Chr8 exon 1847310 1847419 1847310 ID=MsG0880041963.01.T01:exon:1193;Parent=MsG0880041963.01.T01
Chr8 exon 1846145 1846206 1846145 ID=MsG0880041963.01.T01:exon:1192;Parent=MsG0880041963.01.T01
Chr8 exon 1845667 1845824 1845667 ID=MsG0880041963.01.T01:exon:1191;Parent=MsG0880041963.01.T01
Chr8 exon 1845184 1845295 1845184 ID=MsG0880041963.01.T01:exon:1190;Parent=MsG0880041963.01.T01
Chr8 exon 1844981 1845050 1844981 ID=MsG0880041963.01.T01:exon:1189;Parent=MsG0880041963.01.T01
Chr8 exon 1842617 1842699 1842617 ID=MsG0880041963.01.T01:exon:1188;Parent=MsG0880041963.01.T01
Chr8 five_prime_UTR 1849561 1849674 1849561 ID=MsG0880041963.01.T01:five_prime_utr;Parent=MsG0880041963.01.T01
Chr8 five_prime_UTR 1849388 1849470 1849388 ID=MsG0880041963.01.T01:five_prime_utr;Parent=MsG0880041963.01.T01
Chr8 five_prime_UTR 1847604 1847654 1847604 ID=MsG0880041963.01.T01:five_prime_utr;Parent=MsG0880041963.01.T01
Chr8 five_prime_UTR 1847329 1847419 1847329 ID=MsG0880041963.01.T01:five_prime_utr;Parent=MsG0880041963.01.T01
Chr8 CDS 1847310 1847328 1847310 ID=MsG0880041963.01.T01:cds;Parent=MsG0880041963.01.T01
Chr8 CDS 1846145 1846206 1846145 ID=MsG0880041963.01.T01:cds;Parent=MsG0880041963.01.T01
Chr8 CDS 1845667 1845824 1845667 ID=MsG0880041963.01.T01:cds;Parent=MsG0880041963.01.T01
Chr8 CDS 1845184 1845295 1845184 ID=MsG0880041963.01.T01:cds;Parent=MsG0880041963.01.T01
Chr8 CDS 1844981 1845050 1844981 ID=MsG0880041963.01.T01:cds;Parent=MsG0880041963.01.T01
Chr8 CDS 1842617 1842699 1842617 ID=MsG0880041963.01.T01:cds;Parent=MsG0880041963.01.T01
Gene Sequence

>MsG0880041963.01.T01

ATGGTGCATTTTCTTTTTATCAATTCGGGCATGGAGAGCTTTGCAGAAATCGCTCCATCAGTTCGTGGGCTGCCTCAAATGGTTATCGAAAGCATTAATAAGTGTGATGTAGACATTCGAAGAGAATTATTTAGTAGCATACTGGTAATGTTATTTTTTGTTTCCTTTAATCTCTGTTCCTTCTGTACATATACTCTACCCAGTTTCTATGTAGAGCGTAATTATAAAATTAGCACGGAAGTCAGTCATTTACCTGTGCGTTTAAAGTTGATTGCATTTCACTTTCAGCTTGCTGGTGGTACGGCTTCAATGCAACAACTGAAGGAACGCCTTGAGAAAGACTTGCTAGAGGTGGTGATTTCAAAGGTTAACATTTTTTCAAATGGTTTTTCTGTGCGTCTGAGTTATAGCATTGTAACTTTGTCTGGATTGGAGGCAGTATATTGGCTTCCCTTGGTTCCTTCCAACAAATGTGGTTCTCCAAATCCGAGTAATTTACCTTGA
Protein sequence

>MsG0880041963.01.T01

MVHFLFINSGMESFAEIAPSVRGLPQMVIESINKCDVDIRRELFSSILVMLFFVSFNLCSFCTYTLPSFYVERNYKISTEVSHLPVRLKLIAFHFQLAGGTASMQQLKERLEKDLLEVVISKVNIFSNGFSVRLSYSIVTLSGLEAVYWLPLVPSNKCGSPNPSNLP*